BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035572
(379 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 32/311 (10%)
Query: 3 ENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQ 62
+ F EL A+++FS ++G+G G VYK L D ++A+KR E Q
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL------ADGTLVAVKRLKE---ERXQ 76
Query: 63 DNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL 122
+ E+ ++S + H R G + +LLV +M NGS+
Sbjct: 77 GGELQFQTEVEMIS--------------MAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHEN-DPMIIHRDIKSTNILFDSKWDA 181
L + P L WP R +IA+ +R + LH++ DP IIHRD+K+ NIL D +++A
Sbjct: 123 ASCLRERPESQPP-LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 181
Query: 182 KLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ DFGLA + D GTIG++ P Y + K S+K DVF YGV+LLE+I+ ++
Sbjct: 182 VVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
Query: 240 PIDAAR----DPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSE 295
D AR D ++DW L+KE+KL + D + + + ++Q++ VA C S
Sbjct: 242 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSS 300
Query: 296 EENRPGIGEIL 306
RP + E++
Sbjct: 301 PMERPKMSEVV 311
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 32/311 (10%)
Query: 3 ENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQ 62
+ F EL A+++F ++G+G G VYK L D ++A+KR E Q
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL------ADGXLVAVKRLKE---ERTQ 68
Query: 63 DNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL 122
+ E+ ++S + H R G + +LLV +M NGS+
Sbjct: 69 GGELQFQTEVEMIS--------------MAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHEN-DPMIIHRDIKSTNILFDSKWDA 181
L + P L WP R +IA+ +R + LH++ DP IIHRD+K+ NIL D +++A
Sbjct: 115 ASCLRERPESQPP-LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173
Query: 182 KLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ DFGLA + D G IG++ P Y + K S+K DVF YGV+LLE+I+ ++
Sbjct: 174 VVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
Query: 240 PIDAAR----DPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSE 295
D AR D ++DW L+KE+KL + D + + + ++Q++ VA C S
Sbjct: 234 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSS 292
Query: 296 EENRPGIGEIL 306
RP + E++
Sbjct: 293 PMERPKMSEVV 303
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 149/309 (48%), Gaps = 45/309 (14%)
Query: 9 ELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKL 68
+L +AT +F LIG G G VYK +L D +A+KR
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------VALKR---------------- 70
Query: 69 NNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNS------GSVDGNSNKLLVMEFMPNGSL 122
R S Q + ++F CR+ G D + +L+ ++M NG+L
Sbjct: 71 ----RTPESSQGIEEFETEIETLSF----CRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAK 182
L+ + T + W R++I + +R + LH IIHRD+KS NIL D + K
Sbjct: 123 KRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLHTR--AIIHRDVKSINILLDENFVPK 179
Query: 183 LADFGLAV--SESDESSMVQPA-GTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ DFG++ +E D++ + GT+GY+DP Y +L++K DV+S+GVVL E++ R
Sbjct: 180 ITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
Query: 240 PI--DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEE 297
I R+ ++ +WA+ +L Q+ D + E ++++ A +C++ E
Sbjct: 240 AIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPE-SLRKFGDTAVKCLALSSE 298
Query: 298 NRPGIGEIL 306
+RP +G++L
Sbjct: 299 DRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 148/309 (47%), Gaps = 45/309 (14%)
Query: 9 ELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKL 68
+L +AT +F LIG G G VYK +L D +A+KR
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------VALKR---------------- 70
Query: 69 NNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNS------GSVDGNSNKLLVMEFMPNGSL 122
R S Q + ++F CR+ G D + +L+ ++M NG+L
Sbjct: 71 ----RTPESSQGIEEFETEIETLSF----CRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAK 182
L+ + T + W R++I + +R + LH IIHRD+KS NIL D + K
Sbjct: 123 KRHLYGSDLPTM-SMSWEQRLEICIGAARGLHYLHTR--AIIHRDVKSINILLDENFVPK 179
Query: 183 LADFGLAV--SESDESSMVQPA-GTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ DFG++ +E ++ + GT+GY+DP Y +L++K DV+S+GVVL E++ R
Sbjct: 180 ITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
Query: 240 PI--DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEE 297
I R+ ++ +WA+ +L Q+ D + E ++++ A +C++ E
Sbjct: 240 AIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPE-SLRKFGDTAVKCLALSSE 298
Query: 298 NRPGIGEIL 306
+RP +G++L
Sbjct: 299 DRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 153/312 (49%), Gaps = 38/312 (12%)
Query: 4 NFDYEELVKATESFSQSRL------IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNG 57
+F + EL T +F + + +G+G G VYK + ++ +A+K+ +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-------NNTTVAVKKLAAMV 66
Query: 58 FEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFM 117
++ ++ + EI+V++ Q N +V G S DG+ + LV +M
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHEN-------LVELLGFSS------DGD-DLCLVYVYM 112
Query: 118 PNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS 177
PNGSL D L + TP L W R KIA + I LHEN IHRDIKS NIL D
Sbjct: 113 PNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDE 168
Query: 178 KWDAKLADFGLAVSESDESSMVQPA---GTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEI 234
+ AK++DFGLA + + V + GT Y+ P +++ K D++S+GVVLLEI
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEI 227
Query: 235 ISCRKPIDAARDPASII-DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVS 293
I+ +D R+P ++ +E+ + D ++ +++ M VA++C+
Sbjct: 228 ITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD--STSVEAMYSVASQCLH 285
Query: 294 SEEENRPGIGEI 305
++ RP I ++
Sbjct: 286 EKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 153/312 (49%), Gaps = 38/312 (12%)
Query: 4 NFDYEELVKATESFSQSRL------IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNG 57
+F + EL T +F + + +G+G G VYK + ++ +A+K+ +
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-------NNTTVAVKKLAAMV 60
Query: 58 FEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFM 117
++ ++ + EI+V++ Q N +V G S DG+ + LV +M
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHEN-------LVELLGFSS------DGD-DLCLVYVYM 106
Query: 118 PNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS 177
PNGSL D L + TP L W R KIA + I LHEN IHRDIKS NIL D
Sbjct: 107 PNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDE 162
Query: 178 KWDAKLADFGLAVSESDESSMV---QPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEI 234
+ AK++DFGLA + + V + GT Y+ P +++ K D++S+GVVLLEI
Sbjct: 163 AFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEI 221
Query: 235 ISCRKPIDAARDPASII-DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVS 293
I+ +D R+P ++ +E+ + D ++ +++ M VA++C+
Sbjct: 222 ITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD--STSVEAMYSVASQCLH 279
Query: 294 SEEENRPGIGEI 305
++ RP I ++
Sbjct: 280 EKKNKRPDIKKV 291
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 153/312 (49%), Gaps = 38/312 (12%)
Query: 4 NFDYEELVKATESFSQSRL------IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNG 57
+F + EL T +F + + +G+G G VYK + ++ +A+K+ +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-------NNTTVAVKKLAAMV 66
Query: 58 FEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFM 117
++ ++ + EI+V++ Q N +V G S DG+ + LV +M
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHEN-------LVELLGFSS------DGD-DLCLVYVYM 112
Query: 118 PNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS 177
PNGSL D L + TP L W R KIA + I LHEN IHRDIKS NIL D
Sbjct: 113 PNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDE 168
Query: 178 KWDAKLADFGLAVSESDESSMV---QPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEI 234
+ AK++DFGLA + + V + GT Y+ P +++ K D++S+GVVLLEI
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEI 227
Query: 235 ISCRKPIDAARDPASII-DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVS 293
I+ +D R+P ++ +E+ + D ++ +++ M VA++C+
Sbjct: 228 ITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD--STSVEAMYSVASQCLH 285
Query: 294 SEEENRPGIGEI 305
++ RP I ++
Sbjct: 286 EKKNKRPDIKKV 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 35/253 (13%)
Query: 4 NFDYEELVKATESFSQSRL------IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNG 57
+F + EL T +F + + G+G G VYK + ++ +A+K+ +
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-------NNTTVAVKKLAAMV 57
Query: 58 FEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFM 117
++ ++ + EI+V + Q N +V G S DG+ + LV +
Sbjct: 58 DITTEELKQQFDQEIKVXAKCQHEN-------LVELLGFSS------DGD-DLCLVYVYX 103
Query: 118 PNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS 177
PNGSL D L + TP L W R KIA + I LHEN IHRDIKS NIL D
Sbjct: 104 PNGSLLDRL--SCLDGTPPLSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDE 159
Query: 178 KWDAKLADFGLAVSESDESSMVQPA---GTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEI 234
+ AK++DFGLA + + V + GT Y P +++ K D++S+GVVLLEI
Sbjct: 160 AFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEI 218
Query: 235 ISCRKPIDAARDP 247
I+ +D R+P
Sbjct: 219 ITGLPAVDEHREP 231
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 124/231 (53%), Gaps = 29/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD-NSKKLNNEIRVLSSLQES 81
IG GS G+V++A E H +D KIL + QD +++++N +R ++ ++
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKIL-----------MEQDFHAERVNEFLREVAIMKRL 91
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
R+PN +V F G +V N +V E++ GSLY LLH + A QL
Sbjct: 92 --RHPN--IVLFMG-------AVTQPPNLSIVTEYLSRGSLYRLLHKSGARE--QLDERR 138
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQ 200
R+ +A +++ + LH +P I+HR++KS N+L D K+ K+ DFGL+ + S S
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 201 PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII 251
AGT ++ P ++K DV+S+GV+L E+ + ++P +PA ++
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVV 248
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 123/231 (53%), Gaps = 29/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD-NSKKLNNEIRVLSSLQES 81
IG GS G+V++A E H +D KIL + QD +++++N +R ++ ++
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKIL-----------MEQDFHAERVNEFLREVAIMKRL 91
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
R+PN +V F G+V N +V E++ GSLY LLH + A QL
Sbjct: 92 --RHPN--IVLF-------MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE--QLDERR 138
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQ 200
R+ +A +++ + LH +P I+HRD+KS N+L D K+ K+ DFGL+ + S
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 201 PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII 251
AGT ++ P ++K DV+S+GV+L E+ + ++P +PA ++
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVV 248
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 129/293 (44%), Gaps = 60/293 (20%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++G+G+ G V KA K +AIK+ + + K E+R LS +
Sbjct: 15 VVGRGAFGVVCKAKWRA-------KDVAIKQIES------ESERKAFIVELRQLSRVNHP 61
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
N +V +G +C N LVME+ GSLY++LH A P +
Sbjct: 62 N-------IVKLYG-ACLNP--------VCLVMEYAEGGSLYNVLH--GAEPLPYYTAAH 103
Query: 142 RVKIAMQISRAIQCLHENDP-MIIHRDIKSTNILFDSKWDA-KLADFGLAVSESDESSMV 199
+ +Q S+ + LH P +IHRD+K N+L + K+ DFG A ++ M
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD--IQTHMT 161
Query: 200 QPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWAL---- 255
G+ ++ P S S+K DVFS+G++L E+I+ RKP D PA I WA+
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT 221
Query: 256 --PLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
PLIK LP +E + RC S + RP + EI+
Sbjct: 222 RPPLIK------------NLPKPIES-------LMTRCWSKDPSQRPSMEEIV 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 129/293 (44%), Gaps = 60/293 (20%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++G+G+ G V KA K +AIK+ + + K E+R LS +
Sbjct: 16 VVGRGAFGVVCKAKWRA-------KDVAIKQIES------ESERKAFIVELRQLSRVNHP 62
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
N +V +G +C N LVME+ GSLY++LH A P +
Sbjct: 63 N-------IVKLYG-ACLNP--------VCLVMEYAEGGSLYNVLH--GAEPLPYYTAAH 104
Query: 142 RVKIAMQISRAIQCLHENDP-MIIHRDIKSTNILFDSKWDA-KLADFGLAVSESDESSMV 199
+ +Q S+ + LH P +IHRD+K N+L + K+ DFG A ++ M
Sbjct: 105 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD--IQTHMT 162
Query: 200 QPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWAL---- 255
G+ ++ P S S+K DVFS+G++L E+I+ RKP D PA I WA+
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT 222
Query: 256 --PLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
PLIK LP +E + RC S + RP + EI+
Sbjct: 223 RPPLIK------------NLPKPIES-------LMTRCWSKDPSQRPSMEEIV 256
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 132/309 (42%), Gaps = 62/309 (20%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
++A+E +R IG GS G+VYK D KIL + + F+ + N
Sbjct: 33 IEASEVMLSTR-IGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFR-------N 81
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
E+ VL + N ++ F G ++ N +V ++ SLY LH
Sbjct: 82 EVAVLRKTRHVN-------ILLFMGYMTKD--------NLAIVTQWCEGSSLYKHLH--V 124
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
T Q+ + IA Q ++ + LH + IIHRD+KS NI K+ DFGLA
Sbjct: 125 QETKFQMF--QLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLAT 180
Query: 191 SESDES---SMVQPAGTIGYLDPGY-----TNPSKLSKKVDVFSYGVVLLEIISCRKPID 242
+S S + QP G++ ++ P NP S + DV+SYG+VL E+++ P
Sbjct: 181 VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP--FSFQSDVYSYGIVLYELMTGELPYS 238
Query: 243 AARDPASII-----DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEE 297
+ II +A P + KL + C K M + A CV +E
Sbjct: 239 HINNRDQIIFMVGRGYASPDL--SKLYKNCP-------------KAMKRLVADCVKKVKE 283
Query: 298 NRPGIGEIL 306
RP +IL
Sbjct: 284 ERPLFPQIL 292
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 51/305 (16%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKR---ASTNGFEVLQDNSKKLN 69
A + IGKG G V+K L D ++AIK + G + + ++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVK-----DKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 70 NEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA 129
E+ ++S+L N +V +G ++ +VMEF+P G LY L +
Sbjct: 72 REVFIMSNLNHPN-------IVKLYGLM---------HNPPRMVMEFVPCGDLYHRLLDK 115
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD-----AKLA 184
A + W ++++ + I+ I+ + +P I+HRD++S NI S + AK+A
Sbjct: 116 AHP----IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 185 DFGLAVSESDESSMVQPAGTIGYLDPGYTNPSK--LSKKVDVFSYGVVLLEIISCRKPID 242
DFGL S+ S+ G ++ P + ++K D +S+ ++L I++ P D
Sbjct: 172 DFGL--SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 243 A-ARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
+ I+ +I+EE LR PT E ++ +V C S + + RP
Sbjct: 230 EYSYGKIKFIN----MIREEGLR---------PTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 302 IGEIL 306
I+
Sbjct: 277 FSYIV 281
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 44/294 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F + LIG G G V+KA H+ DG K IKR ++ N++K E++ L+
Sbjct: 13 FKEIELIGSGGFGQVFKA---KHRIDG--KTYVIKR--------VKYNNEKAEREVKALA 59
Query: 77 SLQESNKRNPNYCVVNFH---GTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAAT 133
L N + N C F TS +NS S + MEF G+L +
Sbjct: 60 KLDHVNIVHYNGCWDGFDYDPETSSKNS-SRSKTKCLFIQMEFCDKGTLEQWIEKRRG-- 116
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+L +++ QI++ + +H +I+RD+K +NI K+ DFGL S
Sbjct: 117 -EKLDKVLALELFEQITKGVDYIHSK--KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK 173
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS-CRKPIDAARDPASIID 252
++ + GT+ Y+ P + K+VD+++ G++L E++ C + ++ + D
Sbjct: 174 NDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRD 233
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ I ++K E + Q L +S + E+RP EIL
Sbjct: 234 GIISDIFDKK---------------EKTLLQKL------LSKKPEDRPNTSEIL 266
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 75
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L A ++
Sbjct: 76 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQ----AHAERIDHIKL 119
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 120 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 225
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 51/305 (16%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKR---ASTNGFEVLQDNSKKLN 69
A + IGKG G V+K L D ++AIK + G + + ++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVK-----DKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 70 NEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA 129
E+ ++S+L N +V +G ++ +VMEF+P G LY L +
Sbjct: 72 REVFIMSNLNHPN-------IVKLYGLM---------HNPPRMVMEFVPCGDLYHRLLDK 115
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD-----AKLA 184
A + W ++++ + I+ I+ + +P I+HRD++S NI S + AK+A
Sbjct: 116 AHP----IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 185 DFGLAVSESDESSMVQPAGTIGYLDPGYTNPSK--LSKKVDVFSYGVVLLEIISCRKPID 242
DFG S+ S+ G ++ P + ++K D +S+ ++L I++ P D
Sbjct: 172 DFG--TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 243 A-ARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
+ I+ +I+EE LR PT E ++ +V C S + + RP
Sbjct: 230 EYSYGKIKFIN----MIREEGLR---------PTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 302 IGEIL 306
I+
Sbjct: 277 FSYIV 281
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 30/233 (12%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ
Sbjct: 19 RQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQH 73
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V + G C ++G N L+MEF+P GSL + L ++
Sbjct: 74 DN-------IVKYKGV-CYSAG----RRNLKLIMEFLPYGSLREYLQKHKE----RIDHI 117
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSM 198
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E
Sbjct: 118 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 199 VQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
V+ G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 51/305 (16%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKR---ASTNGFEVLQDNSKKLN 69
A + IGKG G V+K L D ++AIK + G + + ++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVK-----DKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 70 NEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA 129
E+ ++S+L N +V +G ++ +VMEF+P G LY L +
Sbjct: 72 REVFIMSNLNHPN-------IVKLYGLM---------HNPPRMVMEFVPCGDLYHRLLDK 115
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD-----AKLA 184
A + W ++++ + I+ I+ + +P I+HRD++S NI S + AK+A
Sbjct: 116 AHP----IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 185 DFGLAVSESDESSMVQPAGTIGYLDPGYTNPSK--LSKKVDVFSYGVVLLEIISCRKPID 242
DF L S+ S+ G ++ P + ++K D +S+ ++L I++ P D
Sbjct: 172 DFSL--SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 243 A-ARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
+ I+ +I+EE LR PT E ++ +V C S + + RP
Sbjct: 230 EYSYGKIKFIN----MIREEGLR---------PTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 302 IGEIL 306
I+
Sbjct: 277 FSYIV 281
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 17 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 71
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 72 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 115
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 116 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 173
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 174 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 221
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 22 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 76
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 77 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 120
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 121 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 178
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 179 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
+ +IG G G VY+A GD +A+K A + E + + + E ++ +
Sbjct: 9 LTLEEIIGIGGFGKVYRAFW-----IGDE--VAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
L+ N ++ G + N LVMEF G L +L
Sbjct: 62 MLKHPN-------IIALRGVCLKEP-------NLCLVMEFARGGPLNRVLSGKRIPPDIL 107
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPM-IIHRDIKSTNILFDSKWD--------AKLADFG 187
+ W A+QI+R + LH+ + IIHRD+KS+NIL K + K+ DFG
Sbjct: 108 VNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161
Query: 188 LAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
LA E ++ + AG ++ P S SK DV+SYGV+L E+++ P
Sbjct: 162 LA-REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 16 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 70
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 71 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 114
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 115 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 172
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 173 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 72
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 73 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 116
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 117 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 222
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 49 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 103
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 104 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 147
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 148 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 205
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 206 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 253
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 72
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 73 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 116
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 117 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 222
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 75
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 76 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 119
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 120 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 225
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 24 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 78
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 79 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 122
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 123 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 180
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 181 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 228
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 23 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 77
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 78 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 121
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 122 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 179
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 180 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 227
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 90
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 91 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 134
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 135 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 240
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 25 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 79
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 80 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 123
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 124 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 181
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 182 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 90
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 91 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 134
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 135 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 240
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 72
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 73 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 116
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHRD+ + NIL +++ K+ DFGL + + E V+
Sbjct: 117 LQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK 174
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 222
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 55/306 (17%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F + LIG G G V+KA H+ DG K I+R ++ N++K E++ L+
Sbjct: 14 FKEIELIGSGGFGQVFKA---KHRIDG--KTYVIRR--------VKYNNEKAEREVKALA 60
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDG---------NSNK------LLVMEFMPNGS 121
L N + N C F + S++ NS++ + MEF G+
Sbjct: 61 KLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 122 LYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
L + +L +++ QI++ + +H +IHRD+K +NI
Sbjct: 121 LEQWIEKRRGE---KLDKVLALELFEQITKGVDYIHSK--KLIHRDLKPSNIFLVDTKQV 175
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS-CRKP 240
K+ DFGL S ++ + GT+ Y+ P + K+VD+++ G++L E++ C
Sbjct: 176 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 235
Query: 241 IDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRP 300
+ ++ + D + I ++K E + Q L +S + E+RP
Sbjct: 236 FETSKFFTDLRDGIISDIFDKK---------------EKTLLQKL------LSKKPEDRP 274
Query: 301 GIGEIL 306
EIL
Sbjct: 275 NTSEIL 280
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE------HQLRREV 56
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 57 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 102
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 103 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 154
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 155 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 206
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 207 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 252
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 59
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 60 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 106 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S + GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 158 APSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 209
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 210 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 255
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D +++A+K+ + E L+D EI +L SLQ N
Sbjct: 19 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDN 73
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V + G C ++G N L+ME++P GSL D L ++
Sbjct: 74 -------IVKYKGV-CYSAG----RRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKL 117
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQ 200
++ QI + ++ L IHR++ + NIL +++ K+ DFGL + + E V+
Sbjct: 118 LQYTSQICKGMEYL--GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVK 175
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
G I + P SK S DV+S+GVVL E+ + I+ ++ P +
Sbjct: 176 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPA 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 64
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G +Y L +
Sbjct: 65 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPRGEVYKELQKLS-- 108
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 109 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 162
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 214
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 215 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 260
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D ++A+K+ +G D + EI++L +L
Sbjct: 15 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQILKALHSDF 69
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNAAAATTPQLGWP 140
+V + G S G LVME++P+G L D L H A + L +
Sbjct: 70 -------IVKYRGVS-----YGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 117
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA---VSESDESS 197
+++ M+ + +C +HRD+ + NIL +S+ K+ADFGLA + D
Sbjct: 118 SQICKGMEYLGSRRC--------VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV 169
Query: 198 MVQPAGT-IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +P + I + P + + S++ DV+S+GVVL E+ +
Sbjct: 170 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 64
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 65 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 108
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 109 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 162
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 163 APSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 214
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 215 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPXLREVL 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 62
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 63 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 109 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 160
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 212
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 213 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 258
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 59
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 60 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 106 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 158 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 209
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 210 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 58
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 59 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 104
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 105 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 156
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 157 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 208
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 209 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 254
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 64
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G +Y L +
Sbjct: 65 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF 110
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 111 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 162
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 163 APSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 214
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 215 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 59
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 60 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 106 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 158 APSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 209
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 210 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 59
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 60 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 103
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 104 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 158 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 209
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 210 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 255
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 120/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A ++ + K+L + G E +L E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE------HQLRREV 59
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G ++ L++E+ P G++Y L +
Sbjct: 60 EIQSHL-----RHPNIL---------RLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF 105
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 106 DEQRTA-----TYITELANALSYCHSKK--VIHRDIKPENLLLGSAGELKIADFGWSV-H 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 158 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 209
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
++ +++ P F+ + ++ +R + RP + E+L
Sbjct: 210 -----TYQDTYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 59
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 60 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 106 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 158 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 209
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 210 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 62
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 63 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 109 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 160
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 161 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 212
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 213 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 63
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 64 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 107
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 108 ---KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSV-H 161
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 162 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 213
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 214 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 60
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 61 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 106
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 107 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 158
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 159 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 210
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 211 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 256
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D ++A+K+ +G D + EI++L +L
Sbjct: 31 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQILKALHSDF 85
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNAAAATTPQLGWP 140
+V + G S G + LVME++P+G L D L H A + L +
Sbjct: 86 -------IVKYRGVS-----YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 133
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA---VSESDESS 197
+++ M+ + +C +HRD+ + NIL +S+ K+ADFGLA + D
Sbjct: 134 SQICKGMEYLGSRRC--------VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185
Query: 198 MVQPAGT-IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +P + I + P + + S++ DV+S+GVVL E+ +
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 59
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 60 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 106 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 158 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 209
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 210 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 59
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 60 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 103
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 104 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 158 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 209
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 210 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 64
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 65 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 110
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 111 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 162
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 163 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 214
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 215 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 62
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 63 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 106
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 107 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 160
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 212
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 213 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 64
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 65 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 108
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 109 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 162
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 214
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 215 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 260
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D ++A+K+ +G D + EI++L +L
Sbjct: 19 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQILKALHSDF 73
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNAAAATTPQLGWP 140
+V + G S G + LVME++P+G L D L H A + L +
Sbjct: 74 -------IVKYRGVS-----YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 121
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA---VSESDESS 197
+++ M+ + +C +HRD+ + NIL +S+ K+ADFGLA + D
Sbjct: 122 SQICKGMEYLGSRRC--------VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 173
Query: 198 MVQPAGT-IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +P + I + P + + S++ DV+S+GVVL E+ +
Sbjct: 174 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 62
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 63 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 106
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 107 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 160
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 161 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 212
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 213 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 61
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 62 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 107
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 108 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 159
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 160 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 211
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 212 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 257
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+GKG+ GSV + D D ++A+K+ +G D + EI++L +L
Sbjct: 18 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQILKALHSDF 72
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNAAAATTPQLGWP 140
+V + G S G + LVME++P+G L D L H A + L +
Sbjct: 73 -------IVKYRGVS-----YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA---VSESDESS 197
+++ M+ + +C +HRD+ + NIL +S+ K+ADFGLA + D
Sbjct: 121 SQICKGMEYLGSRRC--------VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 172
Query: 198 MVQPAGT-IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +P + I + P + + S++ DV+S+GVVL E+ +
Sbjct: 173 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 85
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 86 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 129
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 130 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 183
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 184 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 235
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 236 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 281
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 76
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 77 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 120
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 121 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 174
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 175 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 226
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 227 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 272
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 49/289 (16%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
ES + +G G G V+ A T H +A+K V + E V
Sbjct: 15 ESLKLEKKLGAGQFGEVWMA------TYNKHTKVAVKTMKPGSMSV-----EAFLAEANV 63
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ +LQ +V H + ++ EFM GSL D L + +
Sbjct: 64 MKTLQHDK-------LVKLHAVVTKEP--------IYIITEFMAKGSLLDFLKSDEGSKQ 108
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSES 193
P P + + QI+ + + + + IHRD+++ NIL + K+ADFGLA V E
Sbjct: 109 PL---PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIED 163
Query: 194 DESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPIDAARDPASII 251
+E + + A I + P N + K DV+S+G++L+EI++ R P +P I
Sbjct: 164 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI- 222
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRP 300
+ + +P E +++ ++ RC + E RP
Sbjct: 223 -------------RALERGYRMPR-PENCPEELYNIMMRCWKNRPEERP 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 62
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 63 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 109 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 160
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 161 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 212
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 213 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 258
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 49/294 (16%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+G++GSV K + H+ G +I+A+KR + V + K+L ++ V+ +
Sbjct: 30 IGRGAYGSVNKMV---HKPSG--QIMAVKRIRST---VDEKEQKQLLMDLDVVMRSSDCP 81
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG--SLYDLLHNAAAATTPQ--LG 138
+V F+G R + + ME M Y +++ P+ LG
Sbjct: 82 Y------IVQFYGALFREG-------DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG 128
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSM 198
KI + +A+ L EN IIHRDIK +NIL D + KL DFG++ D +
Sbjct: 129 -----KITLATVKALNHLKEN-LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182
Query: 199 VQPAGTIGYLDPGYTNPSKLSK----KVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ AG Y+ P +PS + + DV+S G+ L E+ + R P S+ D
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN---SVFDQL 239
Query: 255 LPLIKEEKLRQVCDS--RVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
++K + Q+ +S R P+F ++ C++ +E RP E+L
Sbjct: 240 TQVVKGDP-PQLSNSEEREFSPSF--------INFVNLCLTKDESKRPKYKELL 284
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
+ + + + R +GKG Y+ TD D K + + + +K++ E
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEI------TDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 76
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
I + SL NP+ VV FHG + + +V+E SL +L A
Sbjct: 77 IAIHKSLD-----NPH--VVGFHGF-------FEDDDFVYVVLEICRRRSLLELHKRRKA 122
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
T P+ + R Q + +Q LH N +IHRD+K N+ + D K+ DFGLA
Sbjct: 123 VTEPEARYFMR-----QTIQGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFGLATK 175
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
E D GT Y+ P S +VD++S G +L ++ + P + +
Sbjct: 176 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 60
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 61 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 106
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 107 DEQRTA-----TYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 158
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 159 APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 210
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 211 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 256
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 62
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 63 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+A+FG +V
Sbjct: 109 DEQRTA-----TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFGWSV-H 160
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 212
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 213 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 258
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 60
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 61 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 104
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +
Sbjct: 105 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSC-H 158
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S +GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 159 APSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 210
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 211 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 256
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
+ + + + R +GKG Y+ TD D K + + + +K++ E
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI------TDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
I + SL NP+ VV FHG + + +V+E SL +L A
Sbjct: 93 IAIHKSLD-----NPH--VVGFHGF-------FEDDDFVYVVLEICRRRSLLELHKRRKA 138
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
T P+ + R Q + +Q LH N +IHRD+K N+ + D K+ DFGLA
Sbjct: 139 VTEPEARYFMR-----QTIQGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
E D GT Y+ P S +VD++S G +L ++ + P + +
Sbjct: 192 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
+ + + + R +GKG Y+ TD D K + + + +K++ E
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI------TDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
I + SL NP+ VV FHG + + +V+E SL +L A
Sbjct: 93 IAIHKSLD-----NPH--VVGFHGF-------FEDDDFVYVVLEICRRRSLLELHKRRKA 138
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
T P+ + R Q + +Q LH N +IHRD+K N+ + D K+ DFGLA
Sbjct: 139 VTEPEARYFMR-----QTIQGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
E D GT Y+ P S +VD++S G +L ++ + P + +
Sbjct: 192 IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 123/292 (42%), Gaps = 51/292 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK H +A+K + Q + K NE+ VL + N
Sbjct: 32 IGSGSFGTVYKGKW--------HGDVAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 81
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH A+ +
Sbjct: 82 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----ASETKFEMKKL 122
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q +R + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 123 IDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 200 QPAGTIGYLDPGY-----TNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
Q +G+I ++ P +NP S + DV+++G+VL E+++ + P + II+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNP--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
L +V R P K+M + A C+ + + RP IL
Sbjct: 239 GRGSLSPDLSKV---RSNCP-------KRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
+ + + + R +GKG Y+ TD D K + + + +K++ E
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI------TDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
I + SL NP+ VV FHG + + +V+E SL +L A
Sbjct: 93 IAIHKSLD-----NPH--VVGFHGF-------FEDDDFVYVVLEICRRRSLLELHKRRKA 138
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
T P+ + R Q + +Q LH N +IHRD+K N+ + D K+ DFGLA
Sbjct: 139 VTEPEARYFMR-----QTIQGVQYLHNN--RVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
E D GT Y+ P S +VD++S G +L ++ + P + +
Sbjct: 192 IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 61
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 62 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 105
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+A+FG +V
Sbjct: 106 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSV-H 159
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 160 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 211
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 212 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 44/294 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E F R +GKG G+VY A + + K+L + G E +L E+
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREV 85
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+ S L R+PN R G + L++E+ P G++Y L +
Sbjct: 86 EIQSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-- 129
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V
Sbjct: 130 ---KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSV-H 183
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ S GT+ YL P +KVD++S GV+ E + + P +A
Sbjct: 184 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-------- 235
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E +++ P F+ + ++ +R + RP + E+L
Sbjct: 236 -----TYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVL 281
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + IG GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTIGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME+MP G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + K+ADFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + IG GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTIGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME+MP G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + K+ADFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 49/289 (16%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
ES + +G G G V+ A T H +A+K V + E V
Sbjct: 188 ESLKLEKKLGAGQFGEVWMA------TYNKHTKVAVKTMKPGSMSV-----EAFLAEANV 236
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ +LQ +V H + ++ EFM GSL D L + +
Sbjct: 237 MKTLQHDK-------LVKLHAVVTKEP--------IYIITEFMAKGSLLDFLKSDEGSKQ 281
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSES 193
P P + + QI+ + + + + IHRD+++ NIL + K+ADFGLA V E
Sbjct: 282 PL---PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIED 336
Query: 194 DESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPIDAARDPASII 251
+E + + A I + P N + K DV+S+G++L+EI++ R P +P I
Sbjct: 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI- 395
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRP 300
+ + +P E +++ ++ RC + E RP
Sbjct: 396 -------------RALERGYRMPR-PENCPEELYNIMMRCWKNRPEERP 430
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+IG+G+ G V KA + + DG AIKR +D+ + E+ VL L
Sbjct: 22 VIGEGNFGQVLKARI---KKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKL--- 72
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-----------A 130
+PN ++N G +C + G + L +E+ P+G+L D L + A
Sbjct: 73 -GHHPN--IINLLG-ACEHRGYL------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 122
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
+T L + A ++R + L + IHRD+ + NIL + AK+ADFGL+
Sbjct: 123 NSTASTLSSQQLLHFAADVARGMDYLSQK--QFIHRDLAARNILVGENYVAKIADFGLSR 180
Query: 191 SESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ + ++ N S + DV+SYGV+L EI+S
Sbjct: 181 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 102/243 (41%), Gaps = 49/243 (20%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDG---DHKILAIKRASTNGFEVLQDNSKK 67
K ++++ +GKG+ V + + H+T G KI+ K+ S F+ K
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCV---HKTTGLEFAAKIINTKKLSARDFQ-------K 51
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD--- 124
L E R+ LQ N +V H S+ S LV + + G L++
Sbjct: 52 LEREARICRKLQHPN-------IVRLHD-------SIQEESFHYLVFDLVTGGELFEDIV 97
Query: 125 ---LLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
A A+ Q QI +I H N I+HR++K N+L SK
Sbjct: 98 AREFYSEADASHCIQ-----------QILESIAYCHSNG--IVHRNLKPENLLLASKAKG 144
Query: 182 ---KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCR 238
KLADFGLA+ +D + AGT GYL P SK VD+++ GV+L ++
Sbjct: 145 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 204
Query: 239 KPI 241
P
Sbjct: 205 PPF 207
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+IG+G+ G V KA + + DG AIKR +D+ + E+ VL L
Sbjct: 32 VIGEGNFGQVLKARI---KKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKL--- 82
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-----------A 130
+PN ++N G +C + G + L +E+ P+G+L D L + A
Sbjct: 83 -GHHPN--IINLLG-ACEHRGYL------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 132
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
+T L + A ++R + L + IHRD+ + NIL + AK+ADFGL+
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQK--QFIHRDLAARNILVGENYVAKIADFGLSR 190
Query: 191 SESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ + ++ N S + DV+SYGV+L EI+S
Sbjct: 191 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 102/243 (41%), Gaps = 49/243 (20%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDG---DHKILAIKRASTNGFEVLQDNSKK 67
K ++++ +GKG+ V + + H+T G KI+ K+ S F+ K
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCV---HKTTGLEFAAKIINTKKLSARDFQ-------K 50
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD--- 124
L E R+ LQ N +V H S+ S LV + + G L++
Sbjct: 51 LEREARICRKLQHPN-------IVRLHD-------SIQEESFHYLVFDLVTGGELFEDIV 96
Query: 125 ---LLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
A A+ Q QI +I H N I+HR++K N+L SK
Sbjct: 97 AREFYSEADASHCIQ-----------QILESIAYCHSNG--IVHRNLKPENLLLASKAKG 143
Query: 182 ---KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCR 238
KLADFGLA+ +D + AGT GYL P SK VD+++ GV+L ++
Sbjct: 144 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 203
Query: 239 KPI 241
P
Sbjct: 204 PPF 206
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 123/292 (42%), Gaps = 51/292 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK H +A+K + Q + K NE+ VL + N
Sbjct: 20 IGSGSFGTVYKGKW--------HGDVAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 69
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH A+ +
Sbjct: 70 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----ASETKFEMKKL 110
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q +R + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 111 IDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 200 QPAGTIGYLDPGY-----TNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
Q +G+I ++ P +NP S + DV+++G+VL E+++ + P + II+
Sbjct: 169 QLSGSILWMAPEVIRMQDSNP--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
L +V R P K+M + A C+ + + RP IL
Sbjct: 227 GRGSLSPDLSKV---RSNCP-------KRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 102/243 (41%), Gaps = 49/243 (20%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDG---DHKILAIKRASTNGFEVLQDNSKK 67
K ++++ +GKG+ V + + H+T G KI+ K+ S F+ K
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCV---HKTTGLEFAAKIINTKKLSARDFQ-------K 51
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD--- 124
L E R+ LQ N +V H S+ S LV + + G L++
Sbjct: 52 LEREARICRKLQHPN-------IVRLHD-------SIQEESFHYLVFDLVTGGELFEDIV 97
Query: 125 ---LLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
A A+ Q QI +I H N I+HR++K N+L SK
Sbjct: 98 AREFYSEADASHCIQ-----------QILESIAYCHSNG--IVHRNLKPENLLLASKAKG 144
Query: 182 ---KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCR 238
KLADFGLA+ +D + AGT GYL P SK VD+++ GV+L ++
Sbjct: 145 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 204
Query: 239 KPI 241
P
Sbjct: 205 PPF 207
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 122/292 (41%), Gaps = 51/292 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK H +A+K + Q + K NE+ VL + N
Sbjct: 32 IGSGSFGTVYKGKW--------HGDVAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 81
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S ++ V ++ SLY LH A+ +
Sbjct: 82 -------ILLFMGYSTAPQLAI--------VTQWCEGSSLYHHLH----ASETKFEMKKL 122
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q +R + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 123 IDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 200 QPAGTIGYLDPGY-----TNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
Q +G+I ++ P +NP S + DV+++G+VL E+++ + P + II+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNP--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
L +V R P K+M + A C+ + + RP IL
Sbjct: 239 GRGSLSPDLSKV---RSNCP-------KRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 102/243 (41%), Gaps = 49/243 (20%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDG---DHKILAIKRASTNGFEVLQDNSKK 67
K ++++ +GKG+ V + + H+T G KI+ K+ S F+ K
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCV---HKTTGLEFAAKIINTKKLSARDFQ-------K 74
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD--- 124
L E R+ LQ N +V H S+ S LV + + G L++
Sbjct: 75 LEREARICRKLQHPN-------IVRLHD-------SIQEESFHYLVFDLVTGGELFEDIV 120
Query: 125 ---LLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
A A+ Q QI +I H N I+HR++K N+L SK
Sbjct: 121 AREFYSEADASHCIQ-----------QILESIAYCHSNG--IVHRNLKPENLLLASKAKG 167
Query: 182 ---KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCR 238
KLADFGLA+ +D + AGT GYL P SK VD+++ GV+L ++
Sbjct: 168 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 227
Query: 239 KPI 241
P
Sbjct: 228 PPF 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 114/292 (39%), Gaps = 44/292 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F R +GKG G+VY A + K+L + G E +L E+ +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE------HQLRREVEI 65
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
S L R+PN R G + L++E+ P G++Y L +
Sbjct: 66 QSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS---- 107
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V +
Sbjct: 108 -RFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSNGELKIADFGWSV-HAP 163
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
S GT+ YL P +KVD++S GV+ E + P +A
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH---------- 213
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E R++ P F+ + ++ +R + R + E+L
Sbjct: 214 ---TYQETYRRISRVEFTFPDFVTEGARDLI---SRLLKHNASQRLTLAEVL 259
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F++ IGKGS G V+K I D++T +++AIK E +D + + EI V
Sbjct: 23 ELFTKLERIGKGSFGEVFKGI--DNRT---QQVVAIKIID---LEEAEDEIEDIQQEITV 74
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
LS S V ++G+ + S KL ++ME++ GS DLL
Sbjct: 75 LSQCDSS-------YVTKYYGSYLKGS--------KLWIIMEYLGGGSALDLL------- 112
Query: 134 TPQLGWPNRVKIAM---QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
+ G + +IA +I + + LH IHRDIK+ N+L + D KLADFG+A
Sbjct: 113 --RAGPFDEFQIATMLKEILKGLDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFGVAG 168
Query: 191 SESDESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
+D GT ++ P S K D++S G+ +E+ P
Sbjct: 169 QLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + IG GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTIGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + K+ADFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+IG+G+ G V KA + + DG AIKR +D+ + E+ VL L
Sbjct: 29 VIGEGNFGQVLKARI---KKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKL--- 79
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-----------A 130
+PN ++N G +C + G + L +E+ P+G+L D L + A
Sbjct: 80 -GHHPN--IINLLG-ACEHRGYL------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 129
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
+T L + A ++R + L + IHR++ + NIL + AK+ADFGL+
Sbjct: 130 NSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRNLAARNILVGENYVAKIADFGLSR 187
Query: 191 SESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ + ++ N S + DV+SYGV+L EI+S
Sbjct: 188 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 119/290 (41%), Gaps = 47/290 (16%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ + F R +G GS G V+ + R+ NG K L EI
Sbjct: 4 SLQDFQILRTLGTGSFGRVH-----------------LIRSRHNGRYYAM---KVLKKEI 43
Query: 73 RV-LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
V L ++ +N +V H R G+ ++M+++ G L+ LL +
Sbjct: 44 VVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR 102
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
P + A ++ A++ LH D II+RD+K NIL D K+ DFG A
Sbjct: 103 FPNPVAKF-----YAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKY 155
Query: 192 ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII 251
D + + GT Y+ P + +K +D +S+G+++ E+++ P D ++
Sbjct: 156 VPDVTYXL--CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF---YDSNTM- 209
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
+ ++ ++ + P F +K +L +R ++ + R G
Sbjct: 210 ---------KTYEKILNAELRFPPFFNEDVKDLL---SRLITRDLSQRLG 247
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 127/288 (44%), Gaps = 36/288 (12%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G+G G V D DG +++A+K + + K+ EI +L +L
Sbjct: 37 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYH 92
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
+ ++ + G C ++G+ ++ LVME++P GSL D L + +G
Sbjct: 93 EH-------IIKYKGC-CEDAGA----ASLQLVMEYVPLGSLRDYLPRHS------IGLA 134
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSM 198
+ A QI + LH IHRD+ + N+L D+ K+ DFGL AV E E
Sbjct: 135 QLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR 192
Query: 199 VQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS----IID 252
V+ G + + P K DV+S+GV L E+++ D+++ P + +I
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELIG 249
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRP 300
A + +L ++ + LP + ++ H+ C +E RP
Sbjct: 250 IAQGQMTVLRLTELLERGERLPR-PDKCPAEVYHLMKNCWETEASFRP 296
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 42/230 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK--LNNEIRV 74
+++ IG+G+ G+VY A+ D T + +AI++ + LQ KK + NEI V
Sbjct: 22 YTRFEKIGQGASGTVYTAM--DVATGQE---VAIRQMN------LQQQPKKELIINEILV 70
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ +NPN +VN+ + +VME++ GSL D++ T
Sbjct: 71 MRE-----NKNPN--IVNYLDSYLVGD-------ELWVVMEYLAGGSLTDVV------TE 110
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS--- 191
+ + + +A++ LH N +IHRDIKS NIL KL DFG
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
+S S+MV GT ++ P KVD++S G++ +E+I P
Sbjct: 169 EQSKRSTMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 114/292 (39%), Gaps = 44/292 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F R +GKG G+VY A + K+L + G E +L E+ +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE------HQLRREVEI 65
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
S L R+PN R G + L++E+ P G++Y L +
Sbjct: 66 QSHL-----RHPNIL---------RLYGYFHDATRVYLILEYAPLGTVYRELQKLS---- 107
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ +++ A+ H +IHRDIK N+L S + K+ADFG +V +
Sbjct: 108 -RFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLLGSNGELKIADFGWSV-HAP 163
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
S GT+ YL P +KVD++S GV+ E + P +A
Sbjct: 164 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH---------- 213
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+E R++ P F+ + ++ +R + R + E+L
Sbjct: 214 ---TYQETYRRISRVEFTFPDFVTEGARDLI---SRLLKHNASQRLTLAEVL 259
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 88
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 89 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 132
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESS 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA + + + S
Sbjct: 133 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXS 189
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 246
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 247 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 294
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F++ IGKGS G V+K I D++T K++AIK E +D + + EI V
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGI--DNRT---QKVVAIKIID---LEEAEDEIEDIQQEITV 58
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
LS V ++G+ +++ KL ++ME++ GS DLL
Sbjct: 59 LSQCDSP-------YVTKYYGSYLKDT--------KLWIIMEYLGGGSALDLLEPGPLDE 103
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
T I +I + + LH IHRDIK+ N+L + KLADFG+A +
Sbjct: 104 T------QIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Query: 194 DESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
D GT ++ P S K D++S G+ +E+ P
Sbjct: 156 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 105/271 (38%), Gaps = 41/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F R +GKG G+VY A + ++ K+L + G E +L EI +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE------HQLRREIEI 67
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
S L R+PN R L++EF P G LY L
Sbjct: 68 QSHL-----RHPNIL---------RMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---- 109
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ +++ A+ HE +IHRDIK N+L K + K+ADFG +V
Sbjct: 110 -RFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
GT+ YL P +KVD++ GV+ E + P D+ P+
Sbjct: 167 LRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS---PSHT---- 218
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
E R++ + + P F+ K ++
Sbjct: 219 ------ETHRRIVNVDLKFPPFLSDGSKDLI 243
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 7 YEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK 66
Y + + E F++ IGKGS G V+K I D++T K++AIK E +D +
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGI--DNRT---QKVVAIKIID---LEEAEDEIE 70
Query: 67 KLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDL 125
+ EI VLS V ++G+ +++ KL ++ME++ GS DL
Sbjct: 71 DIQQEITVLSQCDSP-------YVTKYYGSYLKDT--------KLWIIMEYLGGGSALDL 115
Query: 126 LHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
L T I +I + + LH IHRDIK+ N+L + KLAD
Sbjct: 116 LEPGPLDET------QIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLAD 167
Query: 186 FGLAVSESDESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
FG+A +D GT ++ P S K D++S G+ +E+ P
Sbjct: 168 FGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 105/271 (38%), Gaps = 41/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F R +GKG G+VY A + ++ K+L + G E +L EI +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE------HQLRREIEI 68
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
S L R+PN R L++EF P G LY L
Sbjct: 69 QSHL-----RHPNIL---------RMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---- 110
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ +++ A+ HE +IHRDIK N+L K + K+ADFG +V
Sbjct: 111 -RFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPS 167
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
GT+ YL P +KVD++ GV+ E + P D+ P+
Sbjct: 168 LRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS---PSHT---- 219
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
E R++ + + P F+ K ++
Sbjct: 220 ------ETHRRIVNVDLKFPPFLSDGSKDLI 244
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 89
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 90 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 133
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 134 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 247
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 248 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F++ IGKGS G V+K I D++T K++AIK E +D + + EI V
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGI--DNRT---QKVVAIKIID---LEEAEDEIEDIQQEITV 58
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
LS V ++G+ +++ ++ME++ GS DLL T
Sbjct: 59 LSQCDSP-------YVTKYYGSYLKDT-------KLWIIMEYLGGGSALDLLEPGPLDET 104
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
I +I + + LH IHRDIK+ N+L + KLADFG+A +D
Sbjct: 105 ------QIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTD 156
Query: 195 ESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT ++ P S K D++S G+ +E+ P
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 131/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGIIM----- 82
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
+ +PN V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 83 -KDFSHPN--VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 130
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 131 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 187
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 244
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 245 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 88
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 89 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 132
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 133 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 189
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 246
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 247 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 294
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 42/230 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK--LNNEIRV 74
+++ IG+G+ G+VY A+ D T + +AI++ + LQ KK + NEI V
Sbjct: 23 YTRFEKIGQGASGTVYTAM--DVATGQE---VAIRQMN------LQQQPKKELIINEILV 71
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ +NPN +VN+ + +VME++ GSL D++ T
Sbjct: 72 MRE-----NKNPN--IVNYLDSYLVGD-------ELWVVMEYLAGGSLTDVV------TE 111
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS--- 191
+ + + +A++ LH N +IHRDIKS NIL KL DFG
Sbjct: 112 TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 169
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
+S S MV GT ++ P KVD++S G++ +E+I P
Sbjct: 170 EQSKRSXMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 42/230 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK--LNNEIRV 74
+++ IG+G+ G+VY A+ D T + +AI++ + LQ KK + NEI V
Sbjct: 22 YTRFEKIGQGASGTVYTAM--DVATGQE---VAIRQMN------LQQQPKKELIINEILV 70
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ +NPN +VN+ + +VME++ GSL D++ T
Sbjct: 71 MRE-----NKNPN--IVNYLDSYLVGD-------ELWVVMEYLAGGSLTDVV------TE 110
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS--- 191
+ + + +A++ LH N +IHRDIKS NIL KL DFG
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
+S S MV GT ++ P KVD++S G++ +E+I P
Sbjct: 169 EQSKRSXMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D DG A+K S N + + S+ L I ++
Sbjct: 30 NEVIGRGHFGCVYHGTLLD--NDGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 84
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 85 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 128
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 129 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 186 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 242
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 243 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 290
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 42/230 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK--LNNEIRV 74
+++ IG+G+ G+VY A+ D T + +AI++ + LQ KK + NEI V
Sbjct: 22 YTRFEKIGQGASGTVYTAM--DVATGQE---VAIRQMN------LQQQPKKELIINEILV 70
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ +NPN +VN+ + +VME++ GSL D++ T
Sbjct: 71 MRE-----NKNPN--IVNYLDSYLVGD-------ELWVVMEYLAGGSLTDVV------TE 110
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS--- 191
+ + + +A++ LH N +IHRDIKS NIL KL DFG
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
+S S MV GT ++ P KVD++S G++ +E+I P
Sbjct: 169 EQSKRSEMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 81
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 82 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 125
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 126 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 182
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 183 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 239
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 240 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 287
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 131/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGIIM----- 104
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
+ +PN V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 105 -KDFSHPN--VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 152
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 153 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 209
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 210 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 266
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 267 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 314
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 89
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 90 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 133
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 134 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 247
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 248 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 87
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 88 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 131
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 132 -DLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 188
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 245
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 246 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 293
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F++ IGKGS G V+K I D++T K++AIK E +D + + EI V
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGI--DNRT---QKVVAIKIID---LEEAEDEIEDIQQEITV 73
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
LS V ++G+ +++ KL ++ME++ GS DLL
Sbjct: 74 LSQCDSP-------YVTKYYGSYLKDT--------KLWIIMEYLGGGSALDLLEPGPLDE 118
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
T I +I + + LH IHRDIK+ N+L + KLADFG+A +
Sbjct: 119 T------QIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLT 170
Query: 194 DESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
D GT ++ P S K D++S G+ +E+ P
Sbjct: 171 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 131/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGIIM----- 83
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
+ +PN V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 84 -KDFSHPN--VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 131
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 132 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 188
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 245
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 246 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 293
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 105/271 (38%), Gaps = 41/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F R +GKG G+VY A + ++ K+L + G E +L EI +
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE------HQLRREIEI 67
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
S L R+PN R L++EF P G LY L
Sbjct: 68 QSHL-----RHPNIL---------RMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---- 109
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ +++ A+ HE +IHRDIK N+L K + K+ADFG +V
Sbjct: 110 -RFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
GT+ YL P +KVD++ GV+ E + P D+ P+
Sbjct: 167 LRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS---PSHT---- 218
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
E R++ + + P F+ K ++
Sbjct: 219 ------ETHRRIVNVDLKFPPFLSDGSKDLI 243
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 89
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 90 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 133
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 134 -DLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 247
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 248 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 89
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 90 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 133
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 134 -DLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 247
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 248 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D DG A+K S N + + S+ L I ++
Sbjct: 40 NEVIGRGHFGCVYHGTLLD--NDGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 94
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 95 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 138
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 139 -DLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 195
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 196 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 252
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 253 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 300
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 90
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 91 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 134
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 135 -DLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 191
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 192 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 249 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 296
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 112/287 (39%), Gaps = 55/287 (19%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
ES + +G G G V+ A T H +A+K V + E V
Sbjct: 182 ESLKLEKKLGAGQFGEVWMA------TYNKHTKVAVKTMKPGSMSV-----EAFLAEANV 230
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ +LQ +V H + ++ EFM GSL D L + +
Sbjct: 231 MKTLQHDK-------LVKLHAVVTKEP--------IYIITEFMAKGSLLDFLKSDEGSKQ 275
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P P + + QI+ + + + + IHRD+++ NIL + K+ADFGLA
Sbjct: 276 PL---PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLA----- 325
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPIDAARDPASIIDW 253
V I + P N + K DV+S+G++L+EI++ R P +P I
Sbjct: 326 ---RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI--- 379
Query: 254 ALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRP 300
+ + +P E +++ ++ RC + E RP
Sbjct: 380 -----------RALERGYRMPR-PENCPEELYNIMMRCWKNRPEERP 414
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 35/190 (18%)
Query: 108 SNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRD 167
S+ +VME++ G L+D + +L ++ QI + H + M++HRD
Sbjct: 89 SDIFMVMEYVSGGELFDYI-----CKNGRLDEKESRRLFQQILSGVDYCHRH--MVVHRD 141
Query: 168 IKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK------ 221
+K N+L D+ +AK+ADFGL+ SD + G+ P Y P +S +
Sbjct: 142 LKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGS-----PNYAAPEVISGRLYAGPE 196
Query: 222 VDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAI 281
VD++S GV+L ++ P D D +P + +++CD P ++ ++
Sbjct: 197 VDIWSSGVILYALLCGTLPFD---------DDHVPTL----FKKICDGIFYTPQYLNPSV 243
Query: 282 ----KQMLHV 287
K ML V
Sbjct: 244 ISLLKHMLQV 253
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 131/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGIIM----- 103
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
+ +PN V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 104 -KDFSHPN--VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 151
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 152 -DLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 208
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 209 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 265
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 266 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 313
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 103/239 (43%), Gaps = 54/239 (22%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
LIG+G +G+VYK L D + +A+K S N + NE +
Sbjct: 20 LIGRGRYGAVYKGSL-------DERPVAVKVFSFA-------NRQNFINEKNIYRVPLME 65
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL--YDLLHNAAAATTPQLGW 139
+ + V + T+ DG LLVME+ PNGSL Y LH + W
Sbjct: 66 HDNIARFIVGDERVTA-------DGRMEYLLVMEYYPNGSLXKYLSLHTS--------DW 110
Query: 140 PNRVKIAMQISRAIQCLHEN-------DPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
+ ++A ++R + LH P I HRD+ S N+L + ++DFGL++
Sbjct: 111 VSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
Query: 193 S---------DESSMVQPAGTIGYLDP----GYTNPSKLS---KKVDVFSYGVVLLEII 235
+ ++++ + GTI Y+ P G N K+VD+++ G++ EI
Sbjct: 171 TGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 3 ENFDYEELVKATES-FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVL 61
+ D + L K E F +G+GS+GSVYKAI H+ G +I+AIK+
Sbjct: 16 KKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAI---HKETG--QIVAIKQVPVES---- 66
Query: 62 QDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGS 121
L I+ +S +Q+ + + VV ++G+ +N+ + +VME+ GS
Sbjct: 67 -----DLQEIIKEISIMQQCDSPH----VVKYYGSYFKNT-------DLWIVMEYCGAGS 110
Query: 122 LYDLLHNAAAATTPQLGWPNRVKIAMQIS-RAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
+ D++ T + + +Q + + ++ LH IHRDIK+ NIL +++
Sbjct: 111 VSDIIRLRNKTLTE-----DEIATILQSTLKGLEYLHFMRK--IHRDIKAGNILLNTEGH 163
Query: 181 AKLADFGLAVSESDESSMVQPA-GTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
AKLADFG+A +D + GT ++ P + D++S G+ +E+ +
Sbjct: 164 AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKP 223
Query: 240 P 240
P
Sbjct: 224 P 224
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 148
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 149 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 192
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 193 -DLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 306
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 307 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 354
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 133/320 (41%), Gaps = 63/320 (19%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLN- 69
++ F + ++G+G+ G V KA + D + AIK+ ++ +KL+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKA-----RNALDSRYYAIKK--------IRHTEEKLST 48
Query: 70 --NEIRVLSSLQESNKRNPNYCVVNFHGTSCRNS-----GSVDGNSNKLLVMEFMPNGSL 122
+E+ +L+SL N Y V + R + +V S + ME+ NG+L
Sbjct: 49 ILSEVMLLASL------NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAK 182
YDL+H+ W ++ QI A+ +H IIHRD+K NI D + K
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVK 156
Query: 183 LADFGLA--VSES-------------DESSMVQPAGTIGYLDPGYTNPS-KLSKKVDVFS 226
+ DFGLA V S ++ GT Y+ + + ++K+D++S
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYS 216
Query: 227 YGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLH 286
G++ E+I P + +I+ +KLR V S P F + +K
Sbjct: 217 LGIIFFEMIY---PFSTGMERVNIL---------KKLRSV--SIEFPPDFDDNKMKVEKK 262
Query: 287 VAARCVSSEEENRPGIGEIL 306
+ + + RPG +L
Sbjct: 263 IIRLLIDHDPNKRPGARTLL 282
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L++ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKEIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME+ P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + K+ DFGLA
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 33/248 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 25 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 73
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N +P +V F+G + + G + + ME M GSL +L A
Sbjct: 74 LQVLHECN--SPY--IVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 122
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSE 192
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ + +
Sbjct: 123 QILG-----KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 176
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
S +S V GT Y+ P + S + D++S G+ L+E+ R PI + +I +
Sbjct: 177 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE 233
Query: 253 WALPLIKE 260
++ E
Sbjct: 234 LLDYIVNE 241
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 42/230 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK--LNNEIRV 74
+++ IG+G+ G+VY A+ D T + +AI++ + LQ KK + NEI V
Sbjct: 23 YTRFEKIGQGASGTVYTAM--DVATGQE---VAIRQMN------LQQQPKKELIINEILV 71
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ +NPN +VN+ + +VME++ GSL D++ T
Sbjct: 72 MRE-----NKNPN--IVNYLDSYLVGD-------ELWVVMEYLAGGSLTDVV------TE 111
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS--- 191
+ + + +A++ LH N +IHR+IKS NIL KL DFG
Sbjct: 112 TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQITP 169
Query: 192 -ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
+S S+MV GT ++ P KVD++S G++ +E+I P
Sbjct: 170 EQSKRSTMV---GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +IG+G G VY L D+ DG A+K S N + + S+ L I ++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVK--SLNRITDIGEVSQFLTEGI-IMKDFS 90
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N V++ G R+ GS L+V+ +M +G L + + N T +
Sbjct: 91 HPN-------VLSLLGICLRSEGS------PLVVLPYMKHGDLRNFIRNETHNPTVK--- 134
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES--S 197
+ + +Q+++ ++ L +HRD+ + N + D K+ K+ADFGLA D+ S
Sbjct: 135 -DLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS 191
Query: 198 MVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ G + ++ K + K DV+S+GV+L E+++ P + D
Sbjct: 192 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDIT 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
+ L++ +L Q P + + + V +C + E RP E++ S F
Sbjct: 249 VYLLQGRRLLQ--------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIF 296
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 39/296 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + IG GS+G K + D KIL K + + + L +E+ +
Sbjct: 6 EDYEVLYTIGTGSYGRCQKI-----RRKSDGKILVWKELDYGS--MTEAEKQMLVSEVNL 58
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L+ N +V ++ + N+ +VME+ G L ++
Sbjct: 59 LRELKHPN-------IVRYYDRIIDRT-----NTTLYIVMEYCEGGDLASVI-TKGTKER 105
Query: 135 PQLGWPNRVKIAMQISRAIQCLH---ENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-V 190
L +++ Q++ A++ H + ++HRD+K N+ D K + KL DFGLA +
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 191 SESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASI 250
DE + GT Y+ P N ++K D++S G +L E+ + P A
Sbjct: 166 LNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-- 223
Query: 251 IDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
I+E K R++ P + +++ R ++ ++ +RP + EIL
Sbjct: 224 ---LAGKIREGKFRRI-------PYRYSDELNEII---TRMLNLKDYHRPSVEEIL 266
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 33/238 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 9 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 57
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N + +V F+G + + G + + ME M GSL +L A
Sbjct: 58 LQVLHECN----SPYIVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 106
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ D
Sbjct: 107 QILG-----KVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 160
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
E + + GT Y+ P + S + D++S G+ L+E+ R P R P +I +
Sbjct: 161 EMAN-EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP----RPPMAIFE 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNR-VKIAMQISRAIQCLHENDPMIIHRDIKS 170
+VME++ +L D++H T P R +++ +A+ H+N IIHRD+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSHQNG--IIHRDVKP 144
Query: 171 TNILFDSKWDAKLADFGLAVSESDE-SSMVQPAGTIG---YLDPGYTNPSKLSKKVDVFS 226
NIL + K+ DFG+A + +D +S+ Q A IG YL P + + DV+S
Sbjct: 145 ANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 227 YGVVLLEIISCRKPI 241
G VL E+++ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E F++ IGKGS G VYK I D+ T +++AIK E +D + +
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGI--DNHTK---EVVAIKIID---LEEAEDEIEDIQQ 66
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI VLS C + R GS ++ ++ME++ GS DLL
Sbjct: 67 EITVLSQ-----------CDSPY---ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP 112
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
T I +I + + LH IHRDIK+ N+L + D KLADFG+A
Sbjct: 113 LEET------YIATILREILKGLDYLHSERK--IHRDIKAANVLLSEQGDVKLADFGVAG 164
Query: 191 SESDESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
+D GT ++ P S K D++S G+ +E+ P
Sbjct: 165 QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EIXINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNH--FAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNH--FAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 54
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 55 EICINAMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 97
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 98 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 245 RD 246
D
Sbjct: 212 SD 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 30/235 (12%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
VK T+ F+ ++GKGS G K +L D + G ++ AIK + V+QD+ +
Sbjct: 16 VKLTD-FNFLMVLGKGSFG---KVMLADRK--GTEELYAIKILKKD--VVIQDDDVECTM 67
Query: 71 -EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA 129
E RVL+ L + P + + H SC + VD VME++ G L +
Sbjct: 68 VEKRVLALLDK-----PPF-LTQLH--SCFQT--VD---RLYFVMEYVNGGDLMYHIQQV 114
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA 189
PQ V A +IS + LH+ II+RD+K N++ DS+ K+ADFG+
Sbjct: 115 GKFKEPQ-----AVFYAAEISIGLFFLHKRG--IIYRDLKLDNVMLDSEGHIKIADFGMC 167
Query: 190 VSE-SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDA 243
D + + GT Y+ P K VD ++YGV+L E+++ + P D
Sbjct: 168 KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + R +G GS G V +L H+ G+H + I + +K+ ++
Sbjct: 42 DQFERIRTLGTGSFGRV---MLVKHKETGNHYAMKIL------------DKQKVVKLKQI 86
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+L E + VNF + S NSN +V+E+ P G ++ L +
Sbjct: 87 EHTLNEKRIQQ----AVNF-PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + K+ADFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNH--FAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 129/295 (43%), Gaps = 55/295 (18%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKR--ASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
+G+G++G V K H G +I+A+KR A+ N E + R+L L
Sbjct: 59 LGRGAYGVVEKM---RHVPSG--QIMAVKRIRATVNSQE-----------QKRLLMDLDI 102
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA--AAATTPQ-- 136
S + V F+G R G V + ME M + SL T P+
Sbjct: 103 SMRTVDCPFTVTFYGALFRE-GDV------WICMELM-DTSLDKFYKQVIDKGQTIPEDI 154
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES 196
LG KIA+ I +A++ LH + +IHRD+K +N+L ++ K+ DFG++ D
Sbjct: 155 LG-----KIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV 208
Query: 197 SMVQPAGTIGYLDPGYTNPS----KLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ AG Y+ P NP S K D++S G+ ++E+ R P D+
Sbjct: 209 AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS--------- 259
Query: 253 WALPLIKEEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
W P ++L+QV + LP A + + ++C+ + RP E++
Sbjct: 260 WGTPF---QQLKQVVEEPSPQLPADKFSA--EFVDFTSQCLKKNSKERPTYPELM 309
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 54
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 55 EIXINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 97
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 98 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 152 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 245 RD 246
D
Sbjct: 212 SD 213
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 96 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EIXINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 103 SVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPM 162
+ + ++ LVM M G + ++N P P + QI ++ LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 163 IIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKK 221
II+RD+K N+L D + +++D GLAV ++ ++ AGT G++ P +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 222 VDVFSYGVVLLEIISCRKPIDA 243
VD F+ GV L E+I+ R P A
Sbjct: 370 VDYFALGVTLYEMIAARGPFRA 391
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 103 SVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPM 162
+ + ++ LVM M G + ++N P P + QI ++ LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 163 IIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKK 221
II+RD+K N+L D + +++D GLAV ++ ++ AGT G++ P +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 222 VDVFSYGVVLLEIISCRKPIDA 243
VD F+ GV L E+I+ R P A
Sbjct: 370 VDYFALGVTLYEMIAARGPFRA 391
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 103 SVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPM 162
+ + ++ LVM M G + ++N P P + QI ++ LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 163 IIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKK 221
II+RD+K N+L D + +++D GLAV ++ ++ AGT G++ P +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 222 VDVFSYGVVLLEIISCRKPIDA 243
VD F+ GV L E+I+ R P A
Sbjct: 370 VDYFALGVTLYEMIAARGPFRA 391
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 87
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 88 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 133
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 134 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 187 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 241
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 242 ----------KIVSGKVRFPSHFSSDLKDLL 262
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 103 SVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPM 162
+ + ++ LVM M G + ++N P P + QI ++ LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 163 IIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKK 221
II+RD+K N+L D + +++D GLAV ++ ++ AGT G++ P +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 222 VDVFSYGVVLLEIISCRKPIDA 243
VD F+ GV L E+I+ R P A
Sbjct: 370 VDYFALGVTLYEMIAARGPFRA 391
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 96 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 54
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 55 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 97
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 98 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 245 RD 246
D
Sbjct: 212 SD 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 54
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 55 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 97
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 98 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 245 RD 246
D
Sbjct: 212 SD 213
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 96 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 55/295 (18%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKR--ASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
+G+G++G V K H G +I+A+KR A+ N E + R+L L
Sbjct: 15 LGRGAYGVVEKM---RHVPSG--QIMAVKRIRATVNSQE-----------QKRLLMDLDI 58
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA--AAATTPQ-- 136
S + V F+G R + + ME M + SL T P+
Sbjct: 59 SMRTVDCPFTVTFYGALFREG-------DVWICMELM-DTSLDKFYKQVIDKGQTIPEDI 110
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDES 196
LG KIA+ I +A++ LH + +IHRD+K +N+L ++ K+ DFG++ D+
Sbjct: 111 LG-----KIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164
Query: 197 SMVQPAGTIGYLDPGYTNPS----KLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ AG Y+ P NP S K D++S G+ ++E+ R P D+
Sbjct: 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS--------- 215
Query: 253 WALPLIKEEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
W P ++L+QV + LP A + + ++C+ + RP E++
Sbjct: 216 WGTPF---QQLKQVVEEPSPQLPADKFSA--EFVDFTSQCLKKNSKERPTYPELM 265
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME+ P G ++ L +
Sbjct: 96 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + K+ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 62 DQFERIKTLGTGSFGRV---MLVKHKETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 115
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ P + F S NSN +VME++P G ++ L +
Sbjct: 116 LQAVN-----FPFLVKLEF---------SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 161
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 162 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 215 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 269
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 270 ----------KIVSGKVRFPSHFSSDLKDLL 290
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 27 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 80
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 81 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 126
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 127 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 179
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 180 RTWTL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 234
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 235 ----------KIVSGKVRFPSHFSSDLKDLL 255
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNR-VKIAMQISRAIQCLHENDPMIIHRDIKS 170
+VME++ +L D++H T P R +++ +A+ H+N IIHRD+K
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSHQNG--IIHRDVKP 161
Query: 171 TNILFDSKWDAKLADFGLAVSESDE-SSMVQPAGTIG---YLDPGYTNPSKLSKKVDVFS 226
NI+ + K+ DFG+A + +D +S+ Q A IG YL P + + DV+S
Sbjct: 162 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 221
Query: 227 YGVVLLEIISCRKPI 241
G VL E+++ P
Sbjct: 222 LGCVLYEVLTGEPPF 236
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNR-VKIAMQISRAIQCLHENDPMIIHRDIKS 170
+VME++ +L D++H T P R +++ +A+ H+N IIHRD+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSHQNG--IIHRDVKP 144
Query: 171 TNILFDSKWDAKLADFGLAVSESDE-SSMVQPAGTIG---YLDPGYTNPSKLSKKVDVFS 226
NI+ + K+ DFG+A + +D +S+ Q A IG YL P + + DV+S
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 227 YGVVLLEIISCRKPI 241
G VL E+++ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L++ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKEIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME+ P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + ++ DFGLA
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 39/246 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 6 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 54
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N + +V F+G + + G + + ME M GSL +L A
Sbjct: 55 LQVLHECN----SPYIVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 103
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSE 192
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ + +
Sbjct: 104 QILG-----KVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI------DAARD 246
S +S V GT Y+ P + S + D++S G+ L+E+ R PI + +R
Sbjct: 158 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP 214
Query: 247 PASIID 252
P +I +
Sbjct: 215 PMAIFE 220
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNR-VKIAMQISRAIQCLHENDPMIIHRDIKS 170
+VME++ +L D++H T P R +++ +A+ H+N IIHRD+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSHQNG--IIHRDVKP 144
Query: 171 TNILFDSKWDAKLADFGLAVSESDE-SSMVQPAGTIG---YLDPGYTNPSKLSKKVDVFS 226
NI+ + K+ DFG+A + +D +S+ Q A IG YL P + + DV+S
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 227 YGVVLLEIISCRKPI 241
G VL E+++ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 28/227 (12%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
F +L+GKG+ G K IL + G + + I R + +D E RVL
Sbjct: 6 DFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVI---IAKDEVAHTVTESRVL 59
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
N R+P + + + + VME+ G L+ L T
Sbjct: 60 Q-----NTRHPFLTALKY---------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SD 194
+ + +I A++ LH D +++RDIK N++ D K+ DFGL SD
Sbjct: 106 RARF-----YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNR-VKIAMQISRAIQCLHENDPMIIHRDIKS 170
+VME++ +L D++H T P R +++ +A+ H+N IIHRD+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSHQNG--IIHRDVKP 144
Query: 171 TNILFDSKWDAKLADFGLAVSESDE-SSMVQPAGTIG---YLDPGYTNPSKLSKKVDVFS 226
NI+ + K+ DFG+A + +D +S+ Q A IG YL P + + DV+S
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 227 YGVVLLEIISCRKPI 241
G VL E+++ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 54
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 55 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 97
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 98 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 245 RD 246
D
Sbjct: 212 SD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 54
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 55 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 97
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 98 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 245 RD 246
D
Sbjct: 212 SD 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNR-VKIAMQISRAIQCLHENDPMIIHRDIKS 170
+VME++ +L D++H T P R +++ +A+ H+N IIHRD+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMT------PKRAIEVIADACQALNFSHQNG--IIHRDVKP 144
Query: 171 TNILFDSKWDAKLADFGLAVSESDE-SSMVQPAGTIG---YLDPGYTNPSKLSKKVDVFS 226
NI+ + K+ DFG+A + +D +S+ Q A IG YL P + + DV+S
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 227 YGVVLLEIISCRKPI 241
G VL E+++ P
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 54
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 55 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 97
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 98 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 245 RD 246
D
Sbjct: 212 SD 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 33 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 81
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N + +V F+G + + G + + ME M GSL +L A
Sbjct: 82 LQVLHECN----SPYIVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 130
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSE 192
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ + +
Sbjct: 131 QILG-----KVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S +S V GT Y+ P + S + D++S G+ L+E+ R PI
Sbjct: 185 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + + S NSN +VME+ P G ++ L +
Sbjct: 96 LQA-------------VNFPFLT-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + K+ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + + S NSN +VME+ P G ++ L +
Sbjct: 96 LQA-------------VNFPFLT-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + K+ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 87
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L
Sbjct: 88 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 133
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 134 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 187 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 241
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 242 ----------KIVSGKVRFPSHFSSDLKDLL 262
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 50 IKRASTNGF--EVLQDNSKKLNNEIRVLSSLQESNKRNPNYC-VVNFHGTSCRNSGSVDG 106
+ RA+ + F ++++ +++L+ E L ++E+ +R + V H S +
Sbjct: 114 VHRATGHEFAVKIMEVTAERLSPE--QLEEVREATRRETHILRQVAGHPHIITLIDSYES 171
Query: 107 NSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHR 166
+S LV + M G L+D L A + + I + A+ LH N+ I+HR
Sbjct: 172 SSFMFLVFDLMRKGELFDYLTEKVALSEKETR-----SIMRSLLEAVSFLHANN--IVHR 224
Query: 167 DIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDP-------GYTNPSKLS 219
D+K NIL D +L+DFG + + + GT GYL P T+P
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPG-YG 283
Query: 220 KKVDVFSYGVVLLEIISCRKPI 241
K+VD+++ GV+L +++ P
Sbjct: 284 KEVDLWACGVILFTLLAGSPPF 305
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 96 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +L+GKG+ G K IL + G + + I R + +D E RVL
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVI---IAKDEVAHTVTESRVLQ 60
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
N R+P + + + + VME+ G L+ L T +
Sbjct: 61 -----NTRHPFLTALKY---------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SDE 195
+ +I A++ LH D +++RDIK N++ D K+ DFGL SD
Sbjct: 107 ARF-----YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +L+GKG+ G K IL + G + + I R + +D E RVL
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVI---IAKDEVAHTVTESRVLQ 60
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
N R+P + + + + VME+ G L+ L T +
Sbjct: 61 -----NTRHPFLTALKY---------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SDE 195
+ +I A++ LH D +++RDIK N++ D K+ DFGL SD
Sbjct: 107 ARF-----YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +L+GKG+ G K IL + G + + I R + +D E RVL
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVI---IAKDEVAHTVTESRVLQ 60
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
N R+P + + + + VME+ G L+ L T +
Sbjct: 61 -----NTRHPFLTALKY---------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SDE 195
+ +I A++ LH D +++RDIK N++ D K+ DFGL SD
Sbjct: 107 ARF-----YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 28/227 (12%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
F +L+GKG+ G K IL + G + + I R + +D E RVL
Sbjct: 11 DFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVI---IAKDEVAHTVTESRVL 64
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
N R+P + + + + VME+ G L+ L T
Sbjct: 65 Q-----NTRHPFLTALKY---------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 110
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SD 194
+ + +I A++ LH D +++RDIK N++ D K+ DFGL SD
Sbjct: 111 RARF-----YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 163
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 108 SNKLLVMEFMPNGSLYDLL--HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
++ +VME++ G L+D + H + ++ QI A+ H + M++H
Sbjct: 84 TDFFMVMEYVSGGELFDYICKHGRVEEMEAR-------RLFQQILSAVDYCHRH--MVVH 134
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK---- 221
RD+K N+L D+ +AK+ADFGL+ SD + G+ P Y P +S +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS-----PNYAAPEVISGRLYAG 189
Query: 222 --VDVFSYGVVLLEIISCRKPIDAARDPA 248
VD++S GV+L ++ P D P
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPT 218
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 108 SNKLLVMEFMPNGSLYDLL--HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
++ +VME++ G L+D + H + ++ QI A+ H + M++H
Sbjct: 84 TDFFMVMEYVSGGELFDYICKHGRVEEMEAR-------RLFQQILSAVDYCHRH--MVVH 134
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK---- 221
RD+K N+L D+ +AK+ADFGL+ SD + G+ P Y P +S +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGS-----PNYAAPEVISGRLYAG 189
Query: 222 --VDVFSYGVVLLEIISCRKPIDAARDPA 248
VD++S GV+L ++ P D P
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPT 218
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +L+GKG+ G K IL + G + + I R + +D E RVL
Sbjct: 10 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVI---IAKDEVAHTVTESRVLQ 63
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
N R+P + + + + VME+ G L+ L T +
Sbjct: 64 -----NTRHPFLTALKY---------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 109
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SDE 195
+ +I A++ LH D +++RDIK N++ D K+ DFGL SD
Sbjct: 110 ARF-----YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 162
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 48/235 (20%)
Query: 19 QSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSL 78
++GKG G +AI H+ G+ ++ +K ++ + E++V+ L
Sbjct: 14 HGEVLGKGCFG---QAIKVTHRETGE--VMVMKEL----IRFDEETQRTFLKEVKVMRCL 64
Query: 79 QESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLG 138
+ N V+ F G + D N + E++ G+L ++ + + Q
Sbjct: 65 EHPN-------VLKFIGVLYK-----DKRLN--FITEYIKGGTLRGIIKSMDS----QYP 106
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSM 198
W RV A I+ + LH + IIHRD+ S N L + +ADFGLA DE +
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT- 163
Query: 199 VQPAG--------------TIG---YLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
QP G +G ++ P N +KVDVFS+G+VL EII
Sbjct: 164 -QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +L+GKG+ G K IL + G + + I R + +D E RVL
Sbjct: 7 FDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVI---IAKDEVAHTVTESRVLQ 60
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
N R+P + + + + VME+ G L+ L T +
Sbjct: 61 -----NTRHPFLTALKY---------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEER 106
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SDE 195
+ +I A++ LH D +++RDIK N++ D K+ DFGL SD
Sbjct: 107 ARF-----YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 22/175 (12%)
Query: 69 NNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN 128
N IR L L E N + +V F+G + + G + + ME M GSL +L
Sbjct: 59 NQIIRELQVLHECN----SPYIVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKE 107
Query: 129 AAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
A LG K+++ + R + L E I+HRD+K +NIL +S+ + KL DFG+
Sbjct: 108 AKRIPEEILG-----KVSIAVLRGLAYLREKH-QIMHRDVKPSNILVNSRGEIKLCDFGV 161
Query: 189 A--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
+ + +S +S V GT Y+ P + S + D++S G+ L+E+ R PI
Sbjct: 162 SGQLIDSMANSFV---GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 27/228 (11%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F +++GKGS G V+ A E +T+ I A+K+ ++ D+ + E RV
Sbjct: 18 EDFELHKMLGKGSFGKVFLA--EFKKTNQFFAIKALKKDVV----LMDDDVECTMVEKRV 71
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
LS E +C + N VME++ G DL+++ +
Sbjct: 72 LSLAWEHPFLTHMFC-------------TFQTKENLFFVMEYLNGG---DLMYHIQSCHK 115
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES- 193
L A +I +Q LH I++RD+K NIL D K+ADFG+
Sbjct: 116 FDLS--RATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENML 171
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++ + GT Y+ P K + VD +S+GV+L E++ + P
Sbjct: 172 GDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 2 AENFDYEELVKATESFSQSRL---IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGF 58
EN ++ + T +L +GKG+ V + + + + KI+ K+ S
Sbjct: 15 TENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR-- 72
Query: 59 EVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMP 118
+ +KL E R+ L+ N +V H S+ LV + +
Sbjct: 73 -----DHQKLEREARICRLLKHPN-------IVRLHD-------SISEEGFHYLVFDLVT 113
Query: 119 NGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
G L++ + + QI ++ +H++D I+HRD+K N+L SK
Sbjct: 114 GGELFEDI-----VAREYYSEADASHCIHQILESVNHIHQHD--IVHRDLKPENLLLASK 166
Query: 179 WDA---KLADFGLAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEI 234
KLADFGLA+ + ++ + AGT GYL P K VD+++ GV+L +
Sbjct: 167 CKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYIL 226
Query: 235 ISCRKPI 241
+ P
Sbjct: 227 LVGYPPF 233
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L +
Sbjct: 96 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWTL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME+ P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + K+ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 6 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 54
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N +V F+G + + G + + ME M GSL +L A
Sbjct: 55 LQVLHECNSPY----IVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 103
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSE 192
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ + +
Sbjct: 104 QILG-----KVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S +S V GT Y+ P + S + D++S G+ L+E+ R PI
Sbjct: 158 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G+G G V D DG +++A+K L+ ++ EI +L +L
Sbjct: 15 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEILRTLYH 70
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
+ +V + G C + G + LVME++P GSL D L +G
Sbjct: 71 EH-------IVKYKG-CCEDQG----EKSVQLVMEYVPLGSLRDYLPRHC------VGLA 112
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSM 198
+ A QI + LH IHR + + N+L D+ K+ DFGL AV E E
Sbjct: 113 QLLLFAQQICEGMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 199 VQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
V+ G + + P K DV+S+GV L E+++
Sbjct: 171 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G+G G V D DG +++A+K L+ ++ EI +L +L
Sbjct: 14 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEILRTLYH 69
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
+ +V + G C + G + LVME++P GSL D L +G
Sbjct: 70 EH-------IVKYKG-CCEDQG----EKSVQLVMEYVPLGSLRDYLPRHC------VGLA 111
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSM 198
+ A QI + LH IHR + + N+L D+ K+ DFGL AV E E
Sbjct: 112 QLLLFAQQICEGMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 199 VQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
V+ G + + P K DV+S+GV L E+++
Sbjct: 170 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 6 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 54
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N +V F+G + + G + + ME M GSL +L A
Sbjct: 55 LQVLHECNSPY----IVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 103
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSE 192
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ + +
Sbjct: 104 QILG-----KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S +S V GT Y+ P + S + D++S G+ L+E+ R PI
Sbjct: 158 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 6 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 54
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N +V F+G + + G + + ME M GSL +L A
Sbjct: 55 LQVLHECNSPY----IVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 103
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSE 192
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ + +
Sbjct: 104 QILG-----KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S +S V GT Y+ P + S + D++S G+ L+E+ R PI
Sbjct: 158 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 37/239 (15%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
E + + +G+G++G V A+ + KI+ +KRA D + + EI
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKKEIC 55
Query: 74 VLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAAT 133
+ L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 56 INKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE------ 95
Query: 134 TPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV- 190
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGLA
Sbjct: 96 -PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATV 152
Query: 191 --SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAARD 246
+ E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D D
Sbjct: 153 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 39/296 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + IG GS+G K + D KIL K + + + L +E+ +
Sbjct: 6 EDYEVLYTIGTGSYGRCQKI-----RRKSDGKILVWKELDYGS--MTEAEKQMLVSEVNL 58
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L+ N +V ++ + N+ +VME+ G L ++
Sbjct: 59 LRELKHPN-------IVRYYDRIIDRT-----NTTLYIVMEYCEGGDLASVI-TKGTKER 105
Query: 135 PQLGWPNRVKIAMQISRAIQCLH---ENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
L +++ Q++ A++ H + ++HRD+K N+ D K + KL DFGLA
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 192 ESDESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASI 250
+ ++S + GT Y+ P N ++K D++S G +L E+ + P A
Sbjct: 166 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-- 223
Query: 251 IDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
I+E K R++ P + +++ R ++ ++ +RP + EIL
Sbjct: 224 ---LAGKIREGKFRRI-------PYRYSDELNEII---TRMLNLKDYHRPSVEEIL 266
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 6 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 54
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N +V F+G + + G + + ME M GSL +L A
Sbjct: 55 LQVLHECNSPY----IVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 103
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSE 192
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ + +
Sbjct: 104 QILG-----KVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S +S V GT Y+ P + S + D++S G+ L+E+ R PI
Sbjct: 158 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 63
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L + A
Sbjct: 64 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 115
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
A P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 116 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 173
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 174 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 54
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 55 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 97
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 98 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 245 RD 246
D
Sbjct: 212 SD 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 39/296 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + IG GS+G K + D KIL K + + + L +E+ +
Sbjct: 6 EDYEVLYTIGTGSYGRCQKI-----RRKSDGKILVWKELDYGS--MTEAEKQMLVSEVNL 58
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L+ N +V ++ + N+ +VME+ G L ++
Sbjct: 59 LRELKHPN-------IVRYYDRIIDRT-----NTTLYIVMEYCEGGDLASVI-TKGTKER 105
Query: 135 PQLGWPNRVKIAMQISRAIQCLH---ENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
L +++ Q++ A++ H + ++HRD+K N+ D K + KL DFGLA
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 192 ESDESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASI 250
+ ++S + GT Y+ P N ++K D++S G +L E+ + P A
Sbjct: 166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-- 223
Query: 251 IDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
I+E K R++ P + +++ R ++ ++ +RP + EIL
Sbjct: 224 ---LAGKIREGKFRRI-------PYRYSDELNEII---TRMLNLKDYHRPSVEEIL 266
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + +G G+ G V+K H+ G L + R + L+ N IR
Sbjct: 68 DDFEKISELGAGNGGVVFKV---SHKPSG----LVMARKLIH----LEIKPAIRNQIIRE 116
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L E N + +V F+G + + G + + ME M GSL +L A
Sbjct: 117 LQVLHECN----SPYIVGFYG-AFYSDGEIS------ICMEHMDGGSLDQVLKKAGRIPE 165
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSE 192
LG K+++ + + + L E I+HRD+K +NIL +S+ + KL DFG++ + +
Sbjct: 166 QILG-----KVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 219
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S +S V GT Y+ P + S + D++S G+ L+E+ R PI
Sbjct: 220 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 16 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 65
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 66 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 106
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 107 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 200 QPAGTIGYLDPG---YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 225 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 73
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L + A
Sbjct: 74 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 125
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
A P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 126 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 183
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 184 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + + S NSN +VME+ P G ++ L
Sbjct: 96 LQA-------------VNFPFLT-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + K+ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G++G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 84 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 138
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ +P T Y+ P P K K
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 199 DMWSLGVIMY-ILLCGYP 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 36 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 85
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 86 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 126
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 127 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 200 QPAGTIGYLDP---GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 244
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 245 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 85 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 139
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 140 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 199
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 200 LLTEIVTHGRIPYPGMTNPEVI 221
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L
Sbjct: 96 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 84 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 138
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVI 220
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++P G ++ L
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+GKG ++ +D D K + + + +K++ EI + SL
Sbjct: 22 FLGKGGFAKCFEI------SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 75
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
+ VV FHG + N +V+E SL +L A T P+ +
Sbjct: 76 H-------VVGFHGF-------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 121
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQ 200
R QI Q LH N +IHRD+K N+ + + K+ DFGLA E D
Sbjct: 122 R-----QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 174
Query: 201 PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
GT Y+ P + S +VDV+S G ++ ++ + P + +
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 108/271 (39%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME+ P G ++ L
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + K+ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+GKG ++ +D D K + + + +K++ EI + SL
Sbjct: 24 FLGKGGFAKCFEI------SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 77
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
+ VV FHG + N +V+E SL +L A T P+ +
Sbjct: 78 H-------VVGFHGF-------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 123
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQ 200
R QI Q LH N +IHRD+K N+ + + K+ DFGLA E D
Sbjct: 124 R-----QIVLGCQYLHRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 176
Query: 201 PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
GT Y+ P + S +VDV+S G ++ ++ + P + +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 84 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 138
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 79 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 133
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 134 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 193
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 194 LLTEIVTHGRIPYPGMTNPEVI 215
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 114/286 (39%), Gaps = 44/286 (15%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+GKG ++ +D D K + + + +K++ EI + SL
Sbjct: 28 FLGKGGFAKCFEI------SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 81
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
+ VV FHG + N +V+E SL +L A T P+ +
Sbjct: 82 H-------VVGFHGF-------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 127
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQ 200
R QI Q LH N +IHRD+K N+ + + K+ DFGLA E D
Sbjct: 128 R-----QIVLGCQYLHRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 180
Query: 201 PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKE 260
GT Y+ P + S +VDV+S G ++ ++ + P + + +KE
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------------CLKE 228
Query: 261 EKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
LR + + +P + ++ + + ++ RP I E+L
Sbjct: 229 TYLR-IKKNEYSIPKHINPVAASLIQ---KMLQTDPTARPTINELL 270
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 86 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 140
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 141 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 200
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 201 LLTEIVTHGRIPYPGMTNPEVI 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+GKG ++ +D D K + + + +K++ EI + SL
Sbjct: 24 FLGKGGFAKCFEI------SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 77
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
+ VV FHG + N +V+E SL +L A T P+ +
Sbjct: 78 H-------VVGFHGF-------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 123
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQ 200
R QI Q LH N +IHRD+K N+ + + K+ DFGLA E D
Sbjct: 124 R-----QIVLGCQYLHRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 176
Query: 201 PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
GT Y+ P + S +VDV+S G ++ ++ + P + +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 93 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 147
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 148 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 207
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 208 LLTEIVTHGRIPYPGMTNPEVI 229
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 92 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 146
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 147 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 206
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 207 LLTEIVTHGRIPYPGMTNPEVI 228
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 90 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 144
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 145 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 205 LLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 89 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 144 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 203
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 204 LLTEIVTHGRIPYPGMTNPEVI 225
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 16 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 65
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 66 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 106
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 107 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 200 QPAGTIGYLDPG---YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 225 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 84 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 138
Query: 172 NILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + +++ ++ I + P N + K DV+S+G+
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 90 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 144
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 145 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 205 LLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 84 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 138
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 36/209 (17%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHEN---------DPM 162
L+ F GSL D L + W +A +SR + LHE+ P
Sbjct: 90 LITAFHDKGSLTDYLKGNI------ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 163 IIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIG---YLDP----GYTNP 215
I HRD KS N+L S A LADFGLAV G +G Y+ P G N
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINF 203
Query: 216 SKLS-KKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKE-------EKLRQVC 267
+ + ++D+++ G+VL E++S K D D ++ LP +E E+L++V
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVSRCKAADGPVD-----EYMLPFEEEIGQHPSLEELQEVV 258
Query: 268 DSRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ PT + +K +A CV+ EE
Sbjct: 259 VHKKMRPTIKDHWLKHP-GLAQLCVTIEE 286
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 44 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 93
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 94 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 134
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 135 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 200 QPAGTIGYLDP---GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 253 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 32/233 (13%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F L+G G++G VYK H G ++ AIK G D +++ EI +L
Sbjct: 26 FELVELVGNGTYGQVYKG---RHVKTG--QLAAIKVMDVTG-----DEEEEIKQEINMLK 75
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAATTP 135
S+ RN + ++G + + G ++L LVMEF GS+ DL+ N T
Sbjct: 76 KY--SHHRN----IATYYGAFIKKNPP--GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDE 195
+ W I +I R + LH++ +IHRDIK N+L + KL DFG++ ++ D
Sbjct: 128 E-EWI--AYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVS-AQLDR 181
Query: 196 SSMVQPA--GTIGYLDPGY----TNP-SKLSKKVDVFSYGVVLLEIISCRKPI 241
+ + GT ++ P NP + K D++S G+ +E+ P+
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 41/271 (15%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +++G+GS G V+ + + + D H + A+K VL+ + K+ + +R +
Sbjct: 30 FELLKVLGQGSFGKVF-LVRKVTRPDSGH-LYAMK--------VLKKATLKVRDRVR--T 77
Query: 77 SLQESNKRNPNY-CVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
++ + N+ VV H + + G + L+++F+ G L+ L T
Sbjct: 78 KMERDILADVNHPFVVKLH-YAFQTEGKL------YLILDFLRGGDLFTRLSKEVMFTEE 130
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD- 194
+ + +++ + LH II+RD+K NIL D + KL DFGL+ D
Sbjct: 131 DVKF-----YLAELALGLDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDH 183
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
E GT+ Y+ P N S D +SYGV++ E+++ P
Sbjct: 184 EKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKD--------- 234
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++E + + +++G+P F+ + +L
Sbjct: 235 ----RKETMTLILKAKLGMPQFLSTEAQSLL 261
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 37/242 (15%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V E + + +G+G+ G V A+ + KI+ +KRA D + +
Sbjct: 2 VPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV--------DCPENIKK 53
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI + L N VV F+G R G++ + L +E+ G L+D +
Sbjct: 54 EICINKMLNHEN-------VVKFYGH--RREGNI-----QYLFLEYCSGGELFDRIE--- 96
Query: 131 AATTPQLGWP--NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
P +G P + + Q+ + LH I HRDIK N+L D + + K++DFGL
Sbjct: 97 ----PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 AV---SESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAA 244
A + E + + GT+ Y+ P + ++ VDV+S G+VL +++ P D
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 245 RD 246
D
Sbjct: 211 SD 212
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + AGT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 32/232 (13%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
T+ + IGKG+ V + + + KI+ K+ S + +KL E R
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR-------DHQKLEREAR 55
Query: 74 VLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAAT 133
+ L+ SN +V H S+ LV + + G L++ +
Sbjct: 56 ICRLLKHSN-------IVRLHD-------SISEEGFHYLVFDLVTGGELFEDI-----VA 96
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA---KLADFGLAV 190
+ QI A+ LH + ++HRD+K N+L SK KLADFGLA+
Sbjct: 97 REYYSEADASHCIQQILEAV--LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
Query: 191 S-ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
+ D+ + AGT GYL P K VD+++ GV+L ++ P
Sbjct: 155 EVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHRD+++
Sbjct: 94 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAA 148
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 149 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 208
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 209 LLTEIVTHGRIPYPGMTNPEVI 230
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 18 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 67
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 68 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 108
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 109 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 200 QPAGTIGYLDP---GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 226
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 227 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 266
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 56/282 (19%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ + +G+GS G V A H T G L I +N ++
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALKI-----------------INKKVLAK 54
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
S +Q +R +Y + H + + ++V+E+ N L+D +
Sbjct: 55 SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRD 108
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDE 195
++ + QI A++ H + I+HRD+K N+L D + K+ADFGL+ +D
Sbjct: 109 KMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 166
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKK------VDVFSYGVVLLEIISCRKPIDAARDPAS 249
+ + G+ P Y P +S K VDV+S GV+L ++ R P D
Sbjct: 167 NFLKTSCGS-----PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD------- 214
Query: 250 IIDWALPLIKEEKLRQVCDSRVGLPTFME----GAIKQMLHV 287
D ++P++ + + + LP F+ G IK+ML V
Sbjct: 215 --DESIPVL----FKNISNGVYTLPKFLSPGAAGLIKRMLIV 250
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 21 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 70
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 71 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 111
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 112 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 200 QPAGTIGYLDPG---YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 230 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 43 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 92
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 93 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 133
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 134 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 200 QPAGTIGYLDP---GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 251
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 252 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 21 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 70
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 71 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 111
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 112 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 200 QPAGTIGYLDPG---YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 230 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 56/282 (19%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ + +G+GS G V A H T G L I +N ++
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALKI-----------------INKKVLAK 44
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
S +Q +R +Y + H + + ++V+E+ N L+D +
Sbjct: 45 SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRD 98
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDE 195
++ + QI A++ H + I+HRD+K N+L D + K+ADFGL+ +D
Sbjct: 99 KMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 156
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKK------VDVFSYGVVLLEIISCRKPIDAARDPAS 249
+ + G+ P Y P +S K VDV+S GV+L ++ R P D
Sbjct: 157 NFLKTSCGS-----PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD------- 204
Query: 250 IIDWALPLIKEEKLRQVCDSRVGLPTFME----GAIKQMLHV 287
D ++P++ + + + LP F+ G IK+ML V
Sbjct: 205 --DESIPVL----FKNISNGVYTLPKFLSPGAAGLIKRMLIV 240
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++G G+ V A ED +T K++AIK + E L+ + NEI VL +
Sbjct: 25 VLGTGAFSEVILA--EDKRT---QKLVAIKCIAK---EALEGKEGSMENEIAVLHKI--- 73
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
++PN ++ SG + L+M+ + G L+D + T +
Sbjct: 74 --KHPNIVALD----DIYESGG-----HLYLIMQLVSGGELFDRIVEKGFYTER-----D 117
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS-KWDAKL--ADFGLAVSESDESSM 198
++ Q+ A++ LH D I+HRD+K N+L+ S D+K+ +DFGL+ E S +
Sbjct: 118 ASRLIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT GY+ P SK VD +S GV+ I+ C P
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 216
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
F +++G+GS G V+ +++ ++ A+K VL+ + K+ + +R
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMK--------VLKKATLKVRDRVR-- 72
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
K + V H + + L+++F+ G L+ L T
Sbjct: 73 ------TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 126
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD- 194
+ + +++ A+ LH II+RD+K NIL D + KL DFGL+ D
Sbjct: 127 DVKF-----YLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
E GT+ Y+ P N ++ D +S+GV++ E+++ P
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------- 230
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIG 303
++E + + +++G+P F+ + +L + NR G G
Sbjct: 231 ----RKETMTMILKAKLGMPQFLSPEAQSLLRM---LFKRNPANRLGAG 272
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 31/233 (13%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G+G G V D DG +++A+K + + K+ EI +L +L
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYH 75
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
+ ++ + G C + G + LVME++P GSL D L + +G
Sbjct: 76 EH-------IIKYKGC-CEDQG----EKSLQLVMEYVPLGSLRDYLPRHS------IGLA 117
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSM 198
+ A QI + LH IHR++ + N+L D+ K+ DFGL AV E E
Sbjct: 118 QLLLFAQQICEGMAYLHSQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 199 VQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
V+ G + + P K DV+S+GV L E+++ D+++ P +
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPT 225
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME+ P G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+GKG ++ +D D K + + + +K++ EI + SL
Sbjct: 46 FLGKGGFAKCFEI------SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 99
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
+ VV FHG + N +V+E SL +L A T P+ +
Sbjct: 100 H-------VVGFHGF-------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 145
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQ 200
R QI Q LH N +IHRD+K N+ + + K+ DFGLA E D
Sbjct: 146 R-----QIVLGCQYLHRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 198
Query: 201 PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
GT Y+ P + S +VDV+S G ++ ++ + P + +
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++G G+ V A ED +T K++AIK + E L+ + NEI VL +
Sbjct: 25 VLGTGAFSEVILA--EDKRT---QKLVAIKCIAK---EALEGKEGSMENEIAVLHKI--- 73
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
++PN ++ SG + L+M+ + G L+D + T +
Sbjct: 74 --KHPNIVALD----DIYESGG-----HLYLIMQLVSGGELFDRIVEKGFYTER-----D 117
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS-KWDAKL--ADFGLAVSESDESSM 198
++ Q+ A++ LH D I+HRD+K N+L+ S D+K+ +DFGL+ E S +
Sbjct: 118 ASRLIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT GY+ P SK VD +S GV+ I+ C P
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 216
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
F +++G+GS G V+ +++ ++ A+K VL+ + K+ + +R
Sbjct: 26 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMK--------VLKKATLKVRDRVR-- 73
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
K + V H + + L+++F+ G L+ L T
Sbjct: 74 ------TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 127
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD- 194
+ + +++ A+ LH II+RD+K NIL D + KL DFGL+ D
Sbjct: 128 DVKF-----YLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 180
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
E GT+ Y+ P N ++ D +S+GV++ E+++ P
Sbjct: 181 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------- 231
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIG 303
++E + + +++G+P F+ + +L + NR G G
Sbjct: 232 ----RKETMTMILKAKLGMPQFLSPEAQSLLRM---LFKRNPANRLGAG 273
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 44 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 93
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S + ++ V ++ SLY LH +
Sbjct: 94 -------ILLFMGYSTKPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 134
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 135 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 200 QPAGTIGYLDP---GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 253 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 91 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 145
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 206 DMWSLGVIMY-ILLCGYP 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 31/233 (13%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G+G G V D DG +++A+K + + K+ EI +L +L
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYH 75
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
+ ++ + G C + G + LVME++P GSL D L + +G
Sbjct: 76 EH-------IIKYKGC-CEDQG----EKSLQLVMEYVPLGSLRDYLPRHS------IGLA 117
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSM 198
+ A QI + LH IHR++ + N+L D+ K+ DFGL AV E E
Sbjct: 118 QLLLFAQQICEGMAYLHAQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 199 VQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
V+ G + + P K DV+S+GV L E+++ D+++ P +
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPT 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 132/320 (41%), Gaps = 63/320 (19%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLN- 69
++ F + ++G+G+ G V KA + D + AIK+ ++ +KL+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKA-----RNALDSRYYAIKK--------IRHTEEKLST 48
Query: 70 --NEIRVLSSLQESNKRNPNYCVVNFHGTSCRNS-----GSVDGNSNKLLVMEFMPNGSL 122
+E+ +L+SL N Y V + R + +V S + ME+ N +L
Sbjct: 49 ILSEVMLLASL------NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL 102
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAK 182
YDL+H+ W ++ QI A+ +H IIHRD+K NI D + K
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVK 156
Query: 183 LADFGLA--VSES-------------DESSMVQPAGTIGYLDPGYTNPS-KLSKKVDVFS 226
+ DFGLA V S ++ GT Y+ + + ++K+D++S
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYS 216
Query: 227 YGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLH 286
G++ E+I P + +I+ +KLR V S P F + +K
Sbjct: 217 LGIIFFEMIY---PFSTGMERVNIL---------KKLRSV--SIEFPPDFDDNKMKVEKK 262
Query: 287 VAARCVSSEEENRPGIGEIL 306
+ + + RPG +L
Sbjct: 263 IIRLLIDHDPNKRPGARTLL 282
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 90 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 144
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 205 DMWSLGVIMY-ILLCGYP 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 100 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 154
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 215 DMWSLGVIMY-ILLCGYP 231
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 92 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 146
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 207 DMWSLGVIMY-ILLCGYP 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IGKG G V +L D++ + + IK +T ++ E V++ L+ SN
Sbjct: 29 IGKGEFGDV---MLGDYRGN-KVAVKCIKNDAT---------AQAFLAEASVMTQLRHSN 75
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V G G + +V E+M GSL D L + + LG
Sbjct: 76 -------LVQLLGVIVEEKGGL------YIVTEYMAKGSLVDYLRSRGRSV---LGGDCL 119
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+K ++ + A++ L N+ +HRD+ + N+L AK++DFGL + E+S Q
Sbjct: 120 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL----TKEASSTQDT 173
Query: 203 GT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
G + + P K S K DV+S+G++L EI S
Sbjct: 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++G G+ V A ED +T K++AIK + E L+ + NEI VL +
Sbjct: 25 VLGTGAFSEVILA--EDKRT---QKLVAIKCIAK---EALEGKEGSMENEIAVLHKI--- 73
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
++PN ++ SG + L+M+ + G L+D + T +
Sbjct: 74 --KHPNIVALD----DIYESGG-----HLYLIMQLVSGGELFDRIVEKGFYTER-----D 117
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS-KWDAKL--ADFGLAVSESDESSM 198
++ Q+ A++ LH D I+HRD+K N+L+ S D+K+ +DFGL+ E S +
Sbjct: 118 ASRLIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT GY+ P SK VD +S GV+ I+ C P
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 56/282 (19%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ + +G+GS G V A H T G L I +N ++
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALKI-----------------INKKVLAK 53
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
S +Q +R +Y + H + + ++V+E+ N L+D +
Sbjct: 54 SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRD 107
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDE 195
++ + QI A++ H + I+HRD+K N+L D + K+ADFGL+ +D
Sbjct: 108 KMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKK------VDVFSYGVVLLEIISCRKPIDAARDPAS 249
+ + G+ P Y P +S K VDV+S GV+L ++ R P D
Sbjct: 166 NFLKTSCGS-----PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD------- 213
Query: 250 IIDWALPLIKEEKLRQVCDSRVGLPTFME----GAIKQMLHV 287
D ++P++ + + + LP F+ G IK+ML V
Sbjct: 214 --DESIPVL----FKNISNGVYTLPKFLSPGAAGLIKRMLIV 249
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 56/282 (19%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ + +G+GS G V A H T G L I +N ++
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALKI-----------------INKKVLAK 48
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
S +Q +R +Y + H + + ++V+E+ N L+D +
Sbjct: 49 SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRD 102
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDE 195
++ + QI A++ H + I+HRD+K N+L D + K+ADFGL+ +D
Sbjct: 103 KMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 160
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKK------VDVFSYGVVLLEIISCRKPIDAARDPAS 249
+ + G+ P Y P +S K VDV+S GV+L ++ R P D
Sbjct: 161 NFLKTSCGS-----PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD------- 208
Query: 250 IIDWALPLIKEEKLRQVCDSRVGLPTFME----GAIKQMLHV 287
D ++P++ + + + LP F+ G IK+ML V
Sbjct: 209 --DESIPVL----FKNISNGVYTLPKFLSPGAAGLIKRMLIV 244
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
+GKG ++ +D D K + + + +K++ EI + SL
Sbjct: 48 FLGKGGFAKCFEI------SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 101
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
+ VV FHG + N +V+E SL +L A T P+ +
Sbjct: 102 H-------VVGFHGF-------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 147
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS-ESDESSMVQ 200
R QI Q LH N +IHRD+K N+ + + K+ DFGLA E D
Sbjct: 148 R-----QIVLGCQYLHRN--RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 200
Query: 201 PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
GT Y+ P + S +VDV+S G ++ ++ + P + +
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 84 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 138
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 199 DMWSLGVIMY-ILLCGYP 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LVME++ +L + + + L + QI I+ H +D I+HRDIK
Sbjct: 88 LVMEYIEGPTLSEYIESHGP-----LSVDTAINFTNQILDGIK--HAHDMRIVHRDIKPQ 140
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQP---AGTIGYLDPGYTNPSKLSKKVDVFSYG 228
NIL DS K+ DFG+A + S E+S+ Q GT+ Y P + D++S G
Sbjct: 141 NILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIG 199
Query: 229 VVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAI 281
+VL E++ P + + + A+ I++ D R +P + I
Sbjct: 200 IVLYEMLVGEPPFNG----ETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI 248
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 140
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 201 DMWSLGVIMY-ILLCGYP 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 85 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 139
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 200 DMWSLGVIMY-ILLCGYP 216
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 140
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 201 DMWSLGVIMY-ILLCGYP 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 136 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 190
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 251 DMWSLGVIMY-ILLCGYP 267
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 184
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + +S+ P T Y+ P P K K
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 245 DMWSLGVIMY-ILLCGYP 261
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRAST-NGFEVLQDNSKKL 68
L +A + + IG+G++G V+KA D + G + +A+KR G E + ++ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGG--RFVALKRVRVQTGEEGMPLSTIRE 61
Query: 69 NNEIRVLSSLQESNK-RNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH 127
+R L + + N R + C V+ D + LV E + DL
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVS----------RTDRETKLTLVFEHVDQ----DL-- 105
Query: 128 NAAAATTPQLGWPNRV--KIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
P+ G P + Q+ R + LH + ++HRD+K NIL S KLAD
Sbjct: 106 TTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLAD 163
Query: 186 FGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
FGLA S + ++ T+ Y P S + VD++S G + E+ RKP+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IGKG G V +L D++ + + IK +T ++ E V++ L+ SN
Sbjct: 14 IGKGEFGDV---MLGDYRGN-KVAVKCIKNDAT---------AQAFLAEASVMTQLRHSN 60
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V G G + +V E+M GSL D L + + LG
Sbjct: 61 -------LVQLLGVIVEEKGGL------YIVTEYMAKGSLVDYLRSRGRSV---LGGDCL 104
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+K ++ + A++ L N+ +HRD+ + N+L AK++DFGL + E+S Q
Sbjct: 105 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL----TKEASSTQDT 158
Query: 203 GT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
G + + P K S K DV+S+G++L EI S
Sbjct: 159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
F +++G+GS G V+ +++ ++ A+K VL+ + K+ + +R
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMK--------VLKKATLKVRDRVR-- 72
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
K + V H + + L+++F+ G L+ L T
Sbjct: 73 ------TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 126
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD- 194
+ + +++ A+ LH II+RD+K NIL D + KL DFGL+ D
Sbjct: 127 DVKF-----YLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
E GT+ Y+ P N ++ D +S+GV++ E+++ P
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------- 230
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIG 303
++E + + +++G+P F+ + +L + NR G G
Sbjct: 231 ----RKETMTMILKAKLGMPQFLSPEAQSLLRM---LFKRNPANRLGAG 272
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 27/228 (11%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F +++GKGS G V+ A E +T+ I A+K+ ++ D+ + E RV
Sbjct: 17 EDFILHKMLGKGSFGKVFLA--EFKKTNQFFAIKALKKDVV----LMDDDVECTMVEKRV 70
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
LS E +C + N VME++ G DL+++ +
Sbjct: 71 LSLAWEHPFLTHMFC-------------TFQTKENLFFVMEYLNGG---DLMYHIQSCHK 114
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES- 193
L A +I +Q LH I++RD+K NIL D K+ADFG+
Sbjct: 115 FDLS--RATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENML 170
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++ GT Y+ P K + VD +S+GV+L E++ + P
Sbjct: 171 GDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 3 ENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQ 62
EN ++ L+ E + + +G+G++G VYKA D +I+A+KR +
Sbjct: 12 ENLYFQGLM---EKYQKLEKVGEGTYGVVYKA------KDSQGRIVALKRIRLDA----- 57
Query: 63 DNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL 122
++ + IR +S L+E + N + H C LV EFM
Sbjct: 58 EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT-----------LVFEFMEKDLK 106
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
L N Q +KI + Q+ R + H++ I+HRD+K N+L +S
Sbjct: 107 KVLDENKTGLQDSQ------IKIYLYQLLRGVAHCHQH--RILHRDLKPQNLLINSDGAL 158
Query: 182 KLADFGLAVSES-DESSMVQPAGTIGYLDPGYTNPS-KLSKKVDVFSYGVVLLEIISCRK 239
KLADFGLA + S T+ Y P S K S VD++S G + E+I+ +
Sbjct: 159 KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218
Query: 240 PIDAARD 246
D
Sbjct: 219 LFPGVTD 225
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 3 ENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQ 62
EN ++ L+ E + + +G+G++G VYKA D +I+A+KR +
Sbjct: 12 ENLYFQGLM---EKYQKLEKVGEGTYGVVYKA------KDSQGRIVALKRIRLDA----- 57
Query: 63 DNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL 122
++ + IR +S L+E + N + H C LV EFM
Sbjct: 58 EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT-----------LVFEFMEKDLK 106
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
L N Q +KI + Q+ R + H++ I+HRD+K N+L +S
Sbjct: 107 KVLDENKTGLQDSQ------IKIYLYQLLRGVAHCHQH--RILHRDLKPQNLLINSDGAL 158
Query: 182 KLADFGLAVSES-DESSMVQPAGTIGYLDPGYTNPS-KLSKKVDVFSYGVVLLEIISCRK 239
KLADFGLA + S T+ Y P S K S VD++S G + E+I+ +
Sbjct: 159 KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218
Query: 240 PIDAARD 246
D
Sbjct: 219 LFPGVTD 225
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IGKG G V +L D++ + + IK +T ++ E V++ L+ SN
Sbjct: 201 IGKGEFGDV---MLGDYRGN-KVAVKCIKNDAT---------AQAFLAEASVMTQLRHSN 247
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V G G + +V E+M GSL D L + + LG
Sbjct: 248 -------LVQLLGVIVEEKGGL------YIVTEYMAKGSLVDYLRSRGRSV---LGGDCL 291
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+K ++ + A++ L N+ +HRD+ + N+L AK++DFGL + E+S Q
Sbjct: 292 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL----TKEASSTQDT 345
Query: 203 GT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
G + + P K S K DV+S+G++L EI S
Sbjct: 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRAST-NGFEVLQDNSKKL 68
L +A + + IG+G++G V+KA D + G + +A+KR G E + ++ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGG--RFVALKRVRVQTGEEGMPLSTIRE 61
Query: 69 NNEIRVLSSLQESNK-RNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH 127
+R L + + N R + C V+ D + LV E + DL
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVS----------RTDRETKLTLVFEHVDQ----DL-- 105
Query: 128 NAAAATTPQLGWPNRV--KIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
P+ G P + Q+ R + LH + ++HRD+K NIL S KLAD
Sbjct: 106 TTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLAD 163
Query: 186 FGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
FGLA S + ++ T+ Y P S + VD++S G + E+ RKP+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L++ME M G L+ + + +I I AIQ LH ++ I H
Sbjct: 97 GKRCLLIIMECMEGGELFSRIQERGDQAFTER---EAAEIMRDIGTAIQFLHSHN--IAH 151
Query: 166 RDIKSTNILFDSKW-DA--KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK DA KL DFG A E+ ++++ P T Y+ P P K K
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFA-KETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 210
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 211 DMWSLGVIMY-ILLCGFP 227
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L++ME M G L+ + + +I I AIQ LH ++ I H
Sbjct: 78 GKRCLLIIMECMEGGELFSRIQERGDQAFTER---EAAEIMRDIGTAIQFLHSHN--IAH 132
Query: 166 RDIKSTNILFDSKW-DA--KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK DA KL DFG A E+ ++++ P T Y+ P P K K
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFA-KETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 191
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 192 DMWSLGVIMY-ILLCGFP 208
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A +P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADEPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G+G G V + D + D + +A+K E ++ L EI +L +L
Sbjct: 15 RDLGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLKP---ESGGNHIADLKKEIEILRNLYH 70
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V + G + DG + L+MEF+P+GSL + L ++
Sbjct: 71 EN-------IVKYKGIC-----TEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLK 114
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSM 198
++K A+QI + + L +HRD+ + N+L +S+ K+ DFGL A+ E
Sbjct: 115 QQLKYAVQICKGMDYLGSR--QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 199 VQP--AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
V+ + + P SK DV+S+GV L E+++
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L + L PN V +A Q++ + + + IHRD++S
Sbjct: 80 IVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSA 134
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL + K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 135 NILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 230 VLLEIIS 236
+L E+++
Sbjct: 195 LLTELVT 201
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 28 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 81
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 82 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 127
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 128 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG 180
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 181 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 235
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 236 ----------KIVSGKVRFPSHFSSDLKDLL 256
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G+G G V + D + D + +A+K E ++ L EI +L +L
Sbjct: 27 RDLGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLKP---ESGGNHIADLKKEIEILRNLYH 82
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V + G + DG + L+MEF+P+GSL + L ++
Sbjct: 83 EN-------IVKYKGIC-----TEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLK 126
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSM 198
++K A+QI + + L +HRD+ + N+L +S+ K+ DFGL A+ E
Sbjct: 127 QQLKYAVQICKGMDYLGSR--QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 199 VQP--AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
V+ + + P SK DV+S+GV L E+++
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 57/295 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG GS G+VYK + GD +A+K + Q + K NE+ VL + N
Sbjct: 16 IGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVN 65
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ F G S ++ V ++ SLY LH +
Sbjct: 66 -------ILLFMGYSTAPQLAI--------VTQWCEGSSLYHHLH----IIETKFEMIKL 106
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS---MV 199
+ IA Q ++ + LH IIHRD+KS NI K+ DFGLA +S S
Sbjct: 107 IDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 200 QPAGTIGYLDPG---YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII----- 251
Q +G+I ++ P + + S + DV+++G+VL E+++ + P + II
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
+ P + K+R C K M + A C+ + + RP +IL
Sbjct: 225 GYLSPDL--SKVRSNCP-------------KAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 134/302 (44%), Gaps = 49/302 (16%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
+E + + + +G G++G V + D T + I I++ S V ++ KL E+
Sbjct: 36 SEMYQRVKKLGSGAYGEVL--LCRDKVTHVERAIKIIRKTS-----VSTSSNSKLLEEVA 88
Query: 74 VLSSLQESNKRNPNYC-VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD-LLHNAAA 131
VL L +PN + +F + N LVME G L+D ++H
Sbjct: 89 VLKLLD-----HPNIMKLYDF----------FEDKRNYYLVMECYKGGELFDEIIHRM-- 131
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW-DA--KLADFGL 188
+ + I Q+ + LH+++ I+HRD+K N+L +SK DA K+ DFGL
Sbjct: 132 ----KFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGL 185
Query: 189 AVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPA 248
+ ++ M + GT Y+ P K +K DV+S GV+L +++ P D
Sbjct: 186 SAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244
Query: 249 SIIDWALPLIKEEKLRQVCDSRVGLPTFMEGA---IKQMLHV-AARCVSSEEE-NRPGIG 303
L K EK + DS EGA IKQML + R +S+++ P I
Sbjct: 245 -------ILRKVEKGKYTFDSP-EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
Query: 304 EI 305
E+
Sbjct: 297 EM 298
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ E+M NGSL D L + +L + +A QI+ + + E + IHR++++
Sbjct: 80 IITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERN--YIHRNLRAA 134
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + + A I + P N + K DV+S+G+
Sbjct: 135 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 194
Query: 230 VLLEIIS-CRKPIDAARDPASI 250
+L EI++ R P +P I
Sbjct: 195 LLTEIVTHGRIPYPGMTNPEVI 216
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 139
Query: 171 TNILFDSKWDAKLADFGLA----VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL+ E+ + + + P N K S K DV+S
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + S + L EK R+G P G ++M
Sbjct: 200 FGVLMWEAFSYGQKPYRGMK--GSEVTAML-----EK-----GERMGCPA---GCPREMY 244
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 245 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 274
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRAST-NGFEVLQDNSKKL 68
L +A + + IG+G++G V+KA D + G + +A+KR G E + ++ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGG--RFVALKRVRVQTGEEGMPLSTIRE 61
Query: 69 NNEIRVLSSLQESNK-RNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH 127
+R L + + N R + C V+ D + LV E + DL
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVS----------RTDRETKLTLVFEHVDQ----DL-- 105
Query: 128 NAAAATTPQLGWPNRV--KIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
P+ G P + Q+ R + LH + ++HRD+K NIL S KLAD
Sbjct: 106 TTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH--RVVHRDLKPQNILVTSSGQIKLAD 163
Query: 186 FGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
FGLA S + ++ T+ Y P S + VD++S G + E+ RKP+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 41/241 (17%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILA---IKRASTNGFEVLQDNSKKL 68
++ E + + + IG+GS G KAIL DG ++ I R S+ ++ S++
Sbjct: 21 QSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKE----REESRR- 72
Query: 69 NNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN 128
E+ VL+ N ++PN +V + S + N + +VM++ G L+ + N
Sbjct: 73 --EVAVLA-----NMKHPN--IVQYRE-------SFEENGSLYIVMDYCEGGDLFKRI-N 115
Query: 129 AAAATTPQ----LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLA 184
A Q L W ++ +A++ H +D I+HRDIKS NI +L
Sbjct: 116 AQKGVLFQEDQILDWFVQICLALK--------HVHDRKILHRDIKSQNIFLTKDGTVQLG 167
Query: 185 DFGLAVSESDESSMVQPA-GTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDA 243
DFG+A + + + GT YL P + K D+++ G VL E+ + + +A
Sbjct: 168 DFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
Query: 244 A 244
Sbjct: 228 G 228
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 58
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 59 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 110
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 111 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 168
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 169 MTRDIXETDXXR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 145
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 146 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 205
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + S + L EK R+G P G ++M
Sbjct: 206 FGVLMWEAFSYGQKPYRGMK--GSEVTAML-----EK-----GERMGCPA---GCPREMY 250
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 251 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 280
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 139
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + S + L EK R+G P G ++M
Sbjct: 200 FGVLMWEAFSYGQKPYRGMK--GSEVTAML-----EK-----GERMGCPA---GCPREMY 244
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 245 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 274
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 83 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 135
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 136 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 195
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + L K E R+G P G ++M
Sbjct: 196 FGVLMWEAFSYGQKPYRGMKGSEVTA----MLEKGE--------RMGCPA---GCPREMY 240
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 241 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 270
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 114/287 (39%), Gaps = 42/287 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+GS +VYK + D +T + + ++ + ++ E L LQ N
Sbjct: 34 IGRGSFKTVYKGL--DTET-----TVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQL-GWPN 141
+V F+ + +V G +LV E +G+L L L W
Sbjct: 87 -------IVRFYDSW---ESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW-- 134
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS-KWDAKLADFGLAVSESDESSMVQ 200
QI + +Q LH P IIHRD+K NI K+ D GLA + +S +
Sbjct: 135 ----CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAK 188
Query: 201 PA-GTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIK 259
GT + P K + VDV+++G LE + P ++ A I
Sbjct: 189 AVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQI--------- 238
Query: 260 EEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
R+V S V +F + AI ++ + C+ ++ R I ++L
Sbjct: 239 ---YRRVT-SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 42 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 96 LQA-------------VNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 141
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 142 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 195 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 249
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 250 ----------KIVSGKVRFPSHFSSDLKDLL 270
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 81 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 133
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 134 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 193
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + L K E R+G P G ++M
Sbjct: 194 FGVLMWEAFSYGQKPYRGMKGSEVTA----MLEKGE--------RMGCPA---GCPREMY 238
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 239 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 268
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 101 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 153
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 154 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 213
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + S + L EK R+G P G ++M
Sbjct: 214 FGVLMWEAFSYGQKPYRGMK--GSEVTAML-----EK-----GERMGCPA---GCPREMY 258
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 259 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 288
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 155
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 215
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + S + L EK R+G P G ++M
Sbjct: 216 FGVLMWEAFSYGQKPYRGMK--GSEVTAML-----EK-----GERMGCPA---GCPREMY 260
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 261 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 290
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 155
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 215
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + S + L EK R+G P G ++M
Sbjct: 216 FGVLMWEAFSYGQKPYRGMK--GSEVTAML-----EK-----GERMGCPA---GCPREMY 260
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 261 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 290
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 67
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 68 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 178 MTRDIXETDXXR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 47/253 (18%)
Query: 7 YEELVKA-------TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFE 59
YE++VK E + ++IG+G+ G V L H+ K+ A+K S FE
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQ---LVRHKAS--QKVYAMKLLSK--FE 112
Query: 60 VLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPN 119
+++ + E R + + S +C + + +VME+MP
Sbjct: 113 MIKRSDSAFFWEERDIMAFANSPWVVQLFC-------------AFQDDKYLYMVMEYMPG 159
Query: 120 GSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW 179
G L +L+ N + V +A+ AI + +IHRD+K N+L D
Sbjct: 160 GDLVNLMSNYDVPEKWAKFYTAEVVLALD---AIHSMG-----LIHRDVKPDNMLLDKHG 211
Query: 180 DAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKL---------SKKVDVFSYGVV 230
KLADFG + + DE+ MV +G P Y +P L ++ D +S GV
Sbjct: 212 HLKLADFGTCM-KMDETGMVHCDTAVG--TPDYISPEVLKSQGGDGYYGRECDWWSVGVF 268
Query: 231 LLEIISCRKPIDA 243
L E++ P A
Sbjct: 269 LFEMLVGDTPFYA 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 36 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 89
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L
Sbjct: 90 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 135
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 136 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 188
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 189 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 243
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 244 ----------KIVSGKVRFPSHFSSDLKDLL 264
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 115
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ P + F S NSN +VME++ G ++ L +
Sbjct: 116 LQAVN-----FPFLVKLEF---------SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 161
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A +
Sbjct: 162 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFA--KRV 212
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 213 KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 269
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 270 ----------KIVSGKVRFPSHFSSDLKDLL 290
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS---KKLNNEIRVLSS 77
+ IGKG+ V A IL K + + Q NS +KL E+R++
Sbjct: 20 KTIGKGNFAKVKLA----------RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 78 LQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQL 137
L N +V ++ LVME+ G ++D L +
Sbjct: 70 LNHPN-------IVKLFEV-------IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE- 114
Query: 138 GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
R K QI A+Q H+ I+HRD+K+ N+L D+ + K+ADFG + + +
Sbjct: 115 ---ARAKFR-QIVSAVQYCHQK--FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 198 MVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDA 243
+ + G+ Y P K +VDV+S GV+L ++S P D
Sbjct: 169 LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 93/229 (40%), Gaps = 20/229 (8%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
AT + IG G++G+VYKA H + NG E L ++ + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA----RDPHSGHFVALKSVRVPNGEEGLPISTVREVALL 57
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
R L + + N VV C S + D LV E + DL A
Sbjct: 58 RRLEAFEHPN-------VVRLMDV-CATSRT-DREIKVTLVFEHVDQ----DLRTYLDKA 104
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
P L + Q R + LH N I+HRD+K NIL S KLADFGLA
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARIY 162
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S + ++ T+ Y P S + VD++S G + E+ RKP+
Sbjct: 163 SYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
Query: 62 QDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGS 121
Q+ + K+ N ++ + + +R C + H R S+ + L+ + + G
Sbjct: 48 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE 107
Query: 122 LYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
L++ + + QI A+ LH + ++HRD+K N+L SK
Sbjct: 108 LFEDI-----VAREYYSEADASHCIQQILEAV--LHCHQMGVVHRDLKPENLLLASKLKG 160
Query: 182 ---KLADFGLAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
KLADFGLA+ E ++ + AGT GYL P K VD+++ GV+L ++
Sbjct: 161 AAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
Query: 238 RKPI 241
P
Sbjct: 221 YPPF 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 93/229 (40%), Gaps = 20/229 (8%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
AT + IG G++G+VYKA H + NG E L ++ + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA----RDPHSGHFVALKSVRVPNGEEGLPISTVREVALL 57
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
R L + + N VV C S + D LV E + DL A
Sbjct: 58 RRLEAFEHPN-------VVRLMDV-CATSRT-DREIKVTLVFEHVDQ----DLRTYLDKA 104
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
P L + Q R + LH N I+HRD+K NIL S KLADFGLA
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARIY 162
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S + ++ T+ Y P S + VD++S G + E+ RKP+
Sbjct: 163 SYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 2 AENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVL 61
A+ F +E A E + SR +G+GS G VY+ + + D +AIK
Sbjct: 3 ADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------- 54
Query: 62 QDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGS 121
+ + + I L+ + N ++ V R G V L++ME M G
Sbjct: 55 -NEAASMRERIEFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGD 105
Query: 122 LYDLLHN--AAAATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFD 176
L L + P L P+ +++A +I+ + L+ N +HRD+ + N +
Sbjct: 106 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVA 163
Query: 177 SKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGV 229
+ K+ DFG+ + E+D G G L + +P L V DV+S+GV
Sbjct: 164 EDFTVKIGDFGMTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 219
Query: 230 VLLEIIS 236
VL EI +
Sbjct: 220 VLWEIAT 226
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IGKG G V +L D++ + + IK +T ++ E V++ L+ SN
Sbjct: 20 IGKGEFGDV---MLGDYRGN-KVAVKCIKNDAT---------AQAFLAEASVMTQLRHSN 66
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V G G + +V E+M GSL D L + + LG
Sbjct: 67 -------LVQLLGVIVEEKGGL------YIVTEYMAKGSLVDYLRSRGRSV---LGGDCL 110
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+K ++ + A++ L N+ +HRD+ + N+L AK++DFGL + E+S Q
Sbjct: 111 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL----TKEASSTQDT 164
Query: 203 GT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
G + + P + S K DV+S+G++L EI S
Sbjct: 165 GKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 39/245 (15%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
+ F L+G+G++G V A H+ G+ I+AIK+ + + + EI+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSAT---HKPTGE--IVAIKKIEPFDKPLFALRTLR---EIK 61
Query: 74 VLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAAT 133
+L + N ++ +S N N++ +++ + L+ ++ +
Sbjct: 62 ILKHFKHEN-------IITIFNIQRPDSFE---NFNEVYIIQELMQTDLHRVI------S 105
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VS 191
T L + Q RA++ LH ++ +IHRD+K +N+L +S D K+ DFGLA +
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163
Query: 192 ES---------DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ES +S MV+ T Y P +K S+ +DV+S G +L E+ R+PI
Sbjct: 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPI 222
Query: 242 DAARD 246
RD
Sbjct: 223 FPGRD 227
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H G+H A+K L+ LN E R+
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHMETGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNF-PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++G G+ V A ED +T K++AIK + + L+ + NEI VL +
Sbjct: 25 VLGTGAFSEVILA--EDKRT---QKLVAIKCIAK---KALEGKEGSMENEIAVLHKI--- 73
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
++PN ++ SG + L+M+ + G L+D + T +
Sbjct: 74 --KHPNIVALD----DIYESGG-----HLYLIMQLVSGGELFDRIVEKGFYTER-----D 117
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS-KWDAKL--ADFGLAVSESDESSM 198
++ Q+ A++ LH D I+HRD+K N+L+ S D+K+ +DFGL+ E S +
Sbjct: 118 ASRLIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT GY+ P SK VD +S GV+ I+ C P
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 34/249 (13%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS------ 65
K ES+ + R +G G++G V + ++ + I IK++ + DN
Sbjct: 33 KIGESYFKVRKLGSGAYGEV--LLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH 90
Query: 66 KKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDL 125
+++ NEI +L SL N ++ + LV EF G L++
Sbjct: 91 EEIYNEISLLKSLDHPN-------IIKLFDV-------FEDKKYFYLVTEFYEGGELFEQ 136
Query: 126 LHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK---WDAK 182
+ N + + I QI I LH+++ I+HRDIK NIL ++K + K
Sbjct: 137 IIN-----RHKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIK 189
Query: 183 LADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPID 242
+ DFGL+ S + + GT Y+ P K ++K DV+S GV++ I+ C P
Sbjct: 190 IVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMY-ILLCGYPPF 247
Query: 243 AARDPASII 251
++ II
Sbjct: 248 GGQNDQDII 256
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 102 GSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ--LGWPNRVKIAMQISRAIQCLHEN 159
G+ N++ + ME M G+ + L P+ LG K+ + I +A+ L E
Sbjct: 91 GTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLKEK 143
Query: 160 DPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLS 219
+IHRD+K +NIL D + KL DFG++ D+ + + AG Y+ P +P +
Sbjct: 144 HG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 220 K-----KVDVFSYGVVLLEIISCRKP 240
K + DV+S G+ L+E+ + + P
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFP 228
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 445 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 497
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 498 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 557
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + S + L EK R+G P G ++M
Sbjct: 558 FGVLMWEAFSYGQKPYRGMK--GSEVTAML-----EK-----GERMGCPA---GCPREMY 602
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 603 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 632
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 115
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ P + F S NSN +VME++ G ++ L
Sbjct: 116 LQAVN-----FPFLVKLEF---------SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 161
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 162 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 215 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 269
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 270 ----------KIVSGKVRFPSHFSSDLKDLL 290
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 26/233 (11%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E++ ++G+G V + I + + KI+ + + E +Q+ + E+ +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L V+ H + + + N+ LV + M G L+D L +
Sbjct: 64 LRK-------------VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 110
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ KI + I LH+ + I+HRD+K NIL D + KL DFG +
Sbjct: 111 KETR-----KIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 163
Query: 195 ESSMVQPAGTIGYLDPGYT------NPSKLSKKVDVFSYGVVLLEIISCRKPI 241
+ + GT YL P N K+VD++S GV++ +++ P
Sbjct: 164 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+LVME G L L N +++ Q+S ++ L E++ +HRD+ +
Sbjct: 446 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN--FVHRDLAA 498
Query: 171 TNILFDSKWDAKLADFGL--AVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFS 226
N+L ++ AK++DFGL A+ + Q G + + P N K S K DV+S
Sbjct: 499 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 558
Query: 227 YGVVLLEIISC-RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
+GV++ E S +KP + S + L EK R+G P G ++M
Sbjct: 559 FGVLMWEAFSYGQKPYRGMK--GSEVTAML-----EK-----GERMGCPA---GCPREMY 603
Query: 286 HVAARCVSSEEENRPGIGEILMGCSCFFVD 315
+ C + + ENRPG + + ++ D
Sbjct: 604 DLMNLCWTYDVENRPGFAAVELRLRNYYYD 633
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N++ D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G+ GSV + + + D I +K+ + +++++ E +++ L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA------DTEEMMREAQIMHQLD--- 68
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
NP +V G C+ +LVME G L+ L ++ N
Sbjct: 69 --NPY--IVRLIGV-CQAEAL-------MLVMEMAGGGPLHKFL----VGKREEIPVSNV 112
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSMVQ 200
++ Q+S ++ L E + +HRD+ + N+L ++ AK++DFGL A+ D +
Sbjct: 113 AELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170
Query: 201 PAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPIDAARDP 247
AG + + P N K S + DV+SYGV + E +S +KP + P
Sbjct: 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 106/237 (44%), Gaps = 51/237 (21%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK--KLNNEIRV 74
FS R IG GS G+VY A + + +++AIK+ S +G Q N K + E+R
Sbjct: 56 FSDLREIGHGSFGAVYFA-----RDVRNSEVVAIKKMSYSG---KQSNEKWQDIIKEVRF 107
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L R+PN + + G R + LVME+ GS DLL
Sbjct: 108 LQKL-----RHPN--TIQYRGCYLREHTA-------WLVMEYC-LGSASDLLEVHKKPL- 151
Query: 135 PQLGWPNRVKIAMQISRAIQ---CLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
V+IA A+Q LH ++ +IHRD+K+ NIL KL DFG A
Sbjct: 152 ------QEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSA-- 201
Query: 192 ESDESSMVQPA----GTIGYLDPGY---TNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S++ PA GT ++ P + + KVDV+S G+ +E+ + P+
Sbjct: 202 -----SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 32/223 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++GKGS G V K +D T ++ + I +AS +D S L E+ +L L
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKN----KDTSTILR-EVELLKKLD-- 79
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
H + ++ +S+ +V E G L+D + + +
Sbjct: 80 ------------HPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHD 122
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK---WDAKLADFGLAVSESDESSM 198
+I Q+ I +H+++ I+HRD+K NIL +SK D K+ DFGL+ + M
Sbjct: 123 AARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
GT Y+ P + +K DV+S GV+L ++S P
Sbjct: 181 KDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 34/247 (13%)
Query: 3 ENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQ 62
EN ++ L ++ + + + +G G++G V + +D T + I IK++S
Sbjct: 12 ENLYFQGL---SDRYQRVKKLGSGAYGEV--LLCKDKLTGAERAIKIIKKSSVT----TT 62
Query: 63 DNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL 122
NS L +E+ VL L N ++ + + N LVME G L
Sbjct: 63 SNSGALLDEVAVLKQLDHPN-------IMKLYEF-------FEDKRNYYLVMEVYRGGEL 108
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK-WDA 181
+D + + + I Q+ LH+++ I+HRD+K N+L +SK DA
Sbjct: 109 FDEI-----ILRQKFSEVDAAVIMKQVLSGTTYLHKHN--IVHRDLKPENLLLESKSRDA 161
Query: 182 --KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
K+ DFGL+ M + GT Y+ P K +K DV+S GV+L ++
Sbjct: 162 LIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYP 220
Query: 240 PIDAARD 246
P D
Sbjct: 221 PFGGQTD 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 106/237 (44%), Gaps = 51/237 (21%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK--KLNNEIRV 74
FS R IG GS G+VY A + + +++AIK+ S +G Q N K + E+R
Sbjct: 17 FSDLREIGHGSFGAVYFA-----RDVRNSEVVAIKKMSYSG---KQSNEKWQDIIKEVRF 68
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L L R+PN + + G R + LVME+ GS DLL
Sbjct: 69 LQKL-----RHPN--TIQYRGCYLREHTA-------WLVMEYCL-GSASDLLEVHKKPL- 112
Query: 135 PQLGWPNRVKIAMQISRAIQ---CLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
V+IA A+Q LH ++ +IHRD+K+ NIL KL DFG A
Sbjct: 113 ------QEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSA-- 162
Query: 192 ESDESSMVQPA----GTIGYLDPGY---TNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S++ PA GT ++ P + + KVDV+S G+ +E+ + P+
Sbjct: 163 -----SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS---KKLNNEIRVLSS 77
+ IGKG+ V A IL K + + Q NS +KL E+R++
Sbjct: 13 KTIGKGNFAKVKLA----------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 78 LQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQL 137
L N +V ++ LVME+ G ++D L
Sbjct: 63 LNHPN-------IVKLFEV-------IETEKTLYLVMEYASGGEVFDYLVAH-------- 100
Query: 138 GWPN----RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
GW R K QI A+Q H+ I+HRD+K+ N+L D+ + K+ADFG + +
Sbjct: 101 GWMKEKEARAKFR-QIVSAVQYCHQK--FIVHRDLKAENLLLDADMNIKIADFGFSNEFT 157
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDA 243
+ + G+ Y P K +VDV+S GV+L ++S P D
Sbjct: 158 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 32/223 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++GKGS G V K +D T ++ + I +AS +D S L E+ +L L
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKN----KDTSTILR-EVELLKKLD-- 79
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
H + ++ +S+ +V E G L+D + + +
Sbjct: 80 ------------HPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHD 122
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK---WDAKLADFGLAVSESDESSM 198
+I Q+ I +H+++ I+HRD+K NIL +SK D K+ DFGL+ + M
Sbjct: 123 AARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
GT Y+ P + +K DV+S GV+L ++S P
Sbjct: 181 KDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 66
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 67 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 176
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 177 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 26/233 (11%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E++ ++G+G V + I + + KI+ + + E +Q+ + E+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L V+ H + + + N+ LV + M G L+D L +
Sbjct: 77 LRK-------------VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 123
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ KI + I LH+ + I+HRD+K NIL D + KL DFG +
Sbjct: 124 KETR-----KIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 195 ESSMVQPAGTIGYLDPGYT------NPSKLSKKVDVFSYGVVLLEIISCRKPI 241
+ + GT YL P N K+VD++S GV++ +++ P
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT YL P +K VD ++ GV++ ++ + P A P I +
Sbjct: 194 RTWXL--CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 66
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 67 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 176
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 177 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 67
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 68 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 178 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 60
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 61 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 112
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 113 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 170
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 171 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS---KKLNNEIRVLSS 77
+ IGKG+ V A IL K + + Q NS +KL E+R++
Sbjct: 20 KTIGKGNFAKVKLA----------RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 78 LQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQL 137
L N +V ++ LVME+ G ++D L +
Sbjct: 70 LNHPN-------IVKLFEV-------IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE- 114
Query: 138 GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
R K QI A+Q H+ I+HRD+K+ N+L D+ + K+ADFG + + +
Sbjct: 115 ---ARAKFR-QIVSAVQYCHQK--FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 198 MVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDA 243
+ G+ Y P K +VDV+S GV+L ++S P D
Sbjct: 169 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 39/245 (15%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
+ F L+G+G++G V A H+ G+ I+AIK+ + + + EI+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSAT---HKPTGE--IVAIKKIEPFDKPLFALRTLR---EIK 61
Query: 74 VLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAAT 133
+L + N ++ +S N N++ +++ + L+ ++ +
Sbjct: 62 ILKHFKHEN-------IITIFNIQRPDSFE---NFNEVYIIQELMQTDLHRVI------S 105
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VS 191
T L + Q RA++ LH ++ +IHRD+K +N+L +S D K+ DFGLA +
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163
Query: 192 ES---------DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ES +S M + T Y P +K S+ +DV+S G +L E+ R+PI
Sbjct: 164 ESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPI 222
Query: 242 DAARD 246
RD
Sbjct: 223 FPGRD 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS---KKLNNEIRVLSS 77
+ IGKG+ V A IL K + + Q NS +KL E+R++
Sbjct: 20 KTIGKGNFAKVKLA----------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 78 LQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQL 137
L N +V ++ LVME+ G ++D L +
Sbjct: 70 LNHPN-------IVKLFEV-------IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE- 114
Query: 138 GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
R K QI A+Q H+ I+HRD+K+ N+L D+ + K+ADFG + + +
Sbjct: 115 ---ARAKFR-QIVSAVQYCHQK--FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 198 MVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDA 243
+ G+ Y P K +VDV+S GV+L ++S P D
Sbjct: 169 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS---KKLNNEIRVLSS 77
+ IGKG+ V A IL K + + Q NS +KL E+R++
Sbjct: 20 KTIGKGNFAKVKLA----------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 78 LQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQL 137
L N +V ++ LVME+ G ++D L +
Sbjct: 70 LNHPN-------IVKLFEV-------IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE- 114
Query: 138 GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
R K QI A+Q H+ I+HRD+K+ N+L D+ + K+ADFG + + +
Sbjct: 115 ---ARAKFR-QIVSAVQYCHQK--FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 198 MVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDA 243
+ G+ Y P K +VDV+S GV+L ++S P D
Sbjct: 169 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 73
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 74 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 125
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 126 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 183
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 184 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 45/293 (15%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G +G VY+ + + K + T + L++++ ++ ++ + ++E
Sbjct: 19 LGGGQYGEVYEGVWK-------------KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI- 64
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++PN +V G R +++EFM G+L D L +
Sbjct: 65 -KHPN--LVQLLGVCTREPPF-------YIIIEFMTYGNLLDYLRECNRQEVSAV---VL 111
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+ +A QIS A++ L + + IHRD+ + N L K+ADFGL+ + ++
Sbjct: 112 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 203 GT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKE 260
I + P +K S K DV+++GV+L EI + DP+ + + L+++
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE----LLEK 225
Query: 261 EKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
D R+ P EG +++ + C +RP EI F
Sbjct: 226 -------DYRMERP---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 93/229 (40%), Gaps = 20/229 (8%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
AT + IG G++G+VYKA H + NG E L ++ + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA----RDPHSGHFVALKSVRVPNGEEGLPISTVREVALL 57
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
R L + + N VV C S + D LV E + DL A
Sbjct: 58 RRLEAFEHPN-------VVRLMDV-CATSRT-DREIKVTLVFEHVDQ----DLRTYLDKA 104
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
P L + Q R + LH N I+HRD+K NIL S KLADFGLA
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARIY 162
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S + ++ T+ Y P S + VD++S G + E+ RKP+
Sbjct: 163 SYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 49/316 (15%)
Query: 1 MAENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEV 60
M+ N+D E+ + + +G G +G VY+ + + K + T +
Sbjct: 2 MSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKT 46
Query: 61 LQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG 120
L++++ ++ ++ + ++E ++PN +V G R ++ EFM G
Sbjct: 47 LKEDTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYG 95
Query: 121 SLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
+L D L + + +A QIS A++ L + + IHRD+ + N L
Sbjct: 96 NLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHL 150
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ADFGL+ + + + PAG I + P +K S K DV+++GV+L EI +
Sbjct: 151 VKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT- 208
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEE 297
P ID + EK D R+ P EG +++ + C
Sbjct: 209 -----YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPS 255
Query: 298 NRPGIGEILMGCSCFF 313
+RP EI F
Sbjct: 256 DRPSFAEIHQAFETMF 271
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 95
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 96 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 147
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + + K+ DFG
Sbjct: 148 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFG 205
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 206 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 49/316 (15%)
Query: 1 MAENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEV 60
M+ N+D E+ + + +G G +G VY+ + + K + T +
Sbjct: 3 MSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKT 47
Query: 61 LQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG 120
L++++ ++ ++ + ++E ++PN +V G R ++ EFM G
Sbjct: 48 LKEDTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYG 96
Query: 121 SLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
+L D L + + +A QIS A++ L + + IHRD+ + N L
Sbjct: 97 NLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHL 151
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ADFGL+ + + + PAG I + P +K S K DV+++GV+L EI +
Sbjct: 152 VKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT- 209
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEE 297
P ID + EK D R+ P EG +++ + C
Sbjct: 210 -----YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPS 256
Query: 298 NRPGIGEILMGCSCFF 313
+RP EI F
Sbjct: 257 DRPSFAEIHQAFETMF 272
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 39/245 (15%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
+ F L+G+G++G V A H+ G+ I+AIK+ + + + EI+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSAT---HKPTGE--IVAIKKIEPFDKPLFALRTLR---EIK 61
Query: 74 VLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAAT 133
+L + N ++ +S N N++ +++ + L+ ++ +
Sbjct: 62 ILKHFKHEN-------IITIFNIQRPDSFE---NFNEVYIIQELMQTDLHRVI------S 105
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VS 191
T L + Q RA++ LH ++ +IHRD+K +N+L +S D K+ DFGLA +
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163
Query: 192 ES---------DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ES +S M + T Y P +K S+ +DV+S G +L E+ R+PI
Sbjct: 164 ESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPI 222
Query: 242 DAARD 246
RD
Sbjct: 223 FPGRD 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 35/257 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F R+IG+GS+ V L+ +TD + + +K+ N E + + ++
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLK--KTDRIYAMKVVKKELVNDDEDI--------DWVQT 54
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ E +P +V H SC + S V+E++ G L + H
Sbjct: 55 EKHVFEQASNHP--FLVGLH--SCFQT-----ESRLFFVIEYVNGGDL--MFHMQRQRKL 103
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL---AVS 191
P+ + + +IS A+ LHE II+RD+K N+L DS+ KL D+G+ +
Sbjct: 104 PE---EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 158
Query: 192 ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPID---AARDP- 247
D +S GT Y+ P VD ++ GV++ E+++ R P D ++ +P
Sbjct: 159 PGDTTSXF--CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 216
Query: 248 ASIIDWALPLIKEEKLR 264
+ D+ +I E+++R
Sbjct: 217 QNTEDYLFQVILEKQIR 233
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 35/257 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F R+IG+GS+ V L+ +TD + + +K+ N E + + ++
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLK--KTDRIYAMKVVKKELVNDDEDI--------DWVQT 58
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ E +P +V H SC + S V+E++ G L + H
Sbjct: 59 EKHVFEQASNHP--FLVGLH--SCFQT-----ESRLFFVIEYVNGGDL--MFHMQRQRKL 107
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL---AVS 191
P+ + + +IS A+ LHE II+RD+K N+L DS+ KL D+G+ +
Sbjct: 108 PE---EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162
Query: 192 ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPID---AARDP- 247
D +S GT Y+ P VD ++ GV++ E+++ R P D ++ +P
Sbjct: 163 PGDTTSXF--CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 220
Query: 248 ASIIDWALPLIKEEKLR 264
+ D+ +I E+++R
Sbjct: 221 QNTEDYLFQVILEKQIR 237
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 35/257 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F R+IG+GS+ V L+ +TD + + +K+ N E + + ++
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLK--KTDRIYAMKVVKKELVNDDEDI--------DWVQT 69
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ E +P +V H SC + S V+E++ G L + H
Sbjct: 70 EKHVFEQASNHP--FLVGLH--SCFQT-----ESRLFFVIEYVNGGDL--MFHMQRQRKL 118
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL---AVS 191
P+ + + +IS A+ LHE II+RD+K N+L DS+ KL D+G+ +
Sbjct: 119 PE---EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 173
Query: 192 ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPID---AARDP- 247
D +S GT Y+ P VD ++ GV++ E+++ R P D ++ +P
Sbjct: 174 PGDTTSXF--CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 231
Query: 248 ASIIDWALPLIKEEKLR 264
+ D+ +I E+++R
Sbjct: 232 QNTEDYLFQVILEKQIR 248
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 32/223 (14%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++GKGS G V K +D T ++ + I +AS +D S L E+ +L L
Sbjct: 29 MLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKN----KDTSTILR-EVELLKKLD-- 79
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPN 141
H + ++ +S+ +V E G L+D + + +
Sbjct: 80 ------------HPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHD 122
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK---WDAKLADFGLAVSESDESSM 198
+I Q+ I +H+++ I+HRD+K NIL +SK D K+ DFGL+ + M
Sbjct: 123 AARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
GT Y+ P + +K DV+S GV+L ++S P
Sbjct: 181 KDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 35/257 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F R+IG+GS+ V L+ +TD + + +K+ N E + + ++
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLK--KTDRIYAMRVVKKELVNDDEDI--------DWVQT 101
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ E +P +V H SC + S V+E++ G L + H
Sbjct: 102 EKHVFEQASNHP--FLVGLH--SCFQT-----ESRLFFVIEYVNGGDL--MFHMQRQRKL 150
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL---AVS 191
P+ + + +IS A+ LHE II+RD+K N+L DS+ KL D+G+ +
Sbjct: 151 PE---EHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205
Query: 192 ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPID---AARDP- 247
D +S GT Y+ P VD ++ GV++ E+++ R P D ++ +P
Sbjct: 206 PGDTTSTF--CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 263
Query: 248 ASIIDWALPLIKEEKLR 264
+ D+ +I E+++R
Sbjct: 264 QNTEDYLFQVILEKQIR 280
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 35/227 (15%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS---KKLNNEIRVLSS 77
+ IGKG+ V A IL K + + Q NS +KL E+R++
Sbjct: 20 KTIGKGNFAKVKLA----------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 78 LQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQL 137
L N +V ++ LVME+ G ++D L +
Sbjct: 70 LNHPN-------IVKLFEV-------IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE- 114
Query: 138 GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
R K QI A+Q H+ I+HRD+K+ N+L D+ + K+ADFG + + +
Sbjct: 115 ---ARAKFR-QIVSAVQYCHQK--FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 198 MVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDA 243
+ G Y P K +VDV+S GV+L ++S P D
Sbjct: 169 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS---ESDESSMV 199
+ I +QI+ A++ LH ++HRD+K +NI F K+ DFGL + + +E +++
Sbjct: 167 LHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 200 QP----------AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEII-SCRKPIDAARDPA 248
P GT Y+ P + + S KVD+FS G++L E++ S ++ R
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIIT 284
Query: 249 SIIDWALPLIKEEKLRQ 265
+ + PL+ +K Q
Sbjct: 285 DVRNLKFPLLFTQKYPQ 301
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 62 QDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGS 121
Q+ + K+ N ++ + + +R C + H R S+ LV + + G
Sbjct: 30 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 122 LYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
L++ + + QI ++ H N I+HRD+K N+L SK
Sbjct: 90 LFEDI-----VAREYYSEADASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKSKG 142
Query: 182 ---KLADFGLAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
KLADFGLA+ + D+ + AGT GYL P K VD+++ GV+L ++
Sbjct: 143 AAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Query: 238 RKPI 241
P
Sbjct: 203 YPPF 206
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 107/253 (42%), Gaps = 49/253 (19%)
Query: 24 GKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESNK 83
+G G V+KA L + + +A+K F + S + E+ L ++ N
Sbjct: 33 ARGRFGCVWKAQLLN-------EYVAVKI-----FPIQDKQSWQNEYEVYSLPGMKHEN- 79
Query: 84 RNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRV 143
++ F G R + SVD + L+ F GSL D L + W
Sbjct: 80 ------ILQFIGAEKRGT-SVD--VDLWLITAFHEKGSLSDFLKANVVS------WNELC 124
Query: 144 KIAMQISRAIQCLHEN--------DPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDE 195
IA ++R + LHE+ P I HRDIKS N+L + A +ADFGLA+
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 196 SSMVQPAGTIG---YLDP----GYTNPSKLS-KKVDVFSYGVVLLEIISCRKPIDAARDP 247
S G +G Y+ P G N + + ++D+++ G+VL E+ S D D
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD- 243
Query: 248 ASIIDWALPLIKE 260
++ LP +E
Sbjct: 244 ----EYMLPFEEE 252
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 25/226 (11%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
+F Q R++GKG G V Q K+ A K+ + + + LN +
Sbjct: 185 TFRQYRVLGKGGFGEVCAC-----QVRATGKMYACKKLEKKRIKKRKGEAMALNEK---- 235
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
Q K N + V + +++ LV+ M G L +++ A P
Sbjct: 236 ---QILEKVNSRFVVSLAYAYETKDA--------LCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDE 195
+ V A +I ++ LH I++RD+K NIL D +++D GLAV +
Sbjct: 285 EA---RAVFYAAEICCGLEDLHRE--RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++ GT+GY+ P + + D ++ G +L E+I+ + P
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 26/233 (11%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E++ ++G+G V + I + + KI+ + + E +Q+ + E+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L V+ H + + + N+ LV + M G L+D L +
Sbjct: 77 LRK-------------VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 123
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ KI + I LH+ + I+HRD+K NIL D + KL DFG +
Sbjct: 124 KETR-----KIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 195 ESSMVQPAGTIGYLDPGYT------NPSKLSKKVDVFSYGVVLLEIISCRKPI 241
+ GT YL P N K+VD++S GV++ +++ P
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS---ESDESSMV 199
+ I +QI+ A++ LH ++HRD+K +NI F K+ DFGL + + +E +++
Sbjct: 121 LHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 200 QP----------AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
P GT Y+ P + + S KVD+FS G++L E++
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+VMEF+ G+L D++ T ++ + + + RA+ LH +IHRDIKS
Sbjct: 119 VVMEFLEGGALTDIV------THTRMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSD 170
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVV 230
+IL S KL+DFG S E + GT ++ P + +VD++S G++
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 230
Query: 231 LLEIISCRKP 240
++E+I P
Sbjct: 231 VIEMIDGEPP 240
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
+F Q R++GKG G V Q K+ A K+ + + + LN E ++L
Sbjct: 185 TFRQYRVLGKGGFGEVCAC-----QVRATGKMYACKKLEKKRIKKRKGEAMALN-EKQIL 238
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
K N + V + +++ LV+ M G L +++ A P
Sbjct: 239 ------EKVNSRFVVSLAYAYETKDA--------LCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDE 195
+ V A +I ++ LH I++RD+K NIL D +++D GLAV +
Sbjct: 285 EA---RAVFYAAEICCGLEDLHRE--RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339
Query: 196 SSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++ GT+GY+ P + + D ++ G +L E+I+ + P
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E + SR +G+GS G VY+ + + D +AIK + + + I
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---------NEAASMRERI 60
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN--AA 130
L+ + N ++ V R G V L++ME M G L L +
Sbjct: 61 EFLNEASVMKEFNCHHVV--------RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 112
Query: 131 AATTPQLGWPN---RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
P L P+ +++A +I+ + L+ N +HRD+ + N + K+ DFG
Sbjct: 113 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFG 170
Query: 188 LA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ + E+D G G L + +P L V DV+S+GVVL EI +
Sbjct: 171 MTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 34/264 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G G V + I HQ G+ +AIK+ E+ N ++ EI+++ L N
Sbjct: 23 LGTGGFGYVLRWI---HQDTGEQ--VAIKQCRQ---ELSPKNRERWCLEIQIMKKLNHPN 74
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
VV+ + N LL ME+ G L L+ + G P R
Sbjct: 75 -------VVSAREVP-DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIR 125
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFD---SKWDAKLADFGLAVSESDESSM- 198
++ IS A++ LHEN IIHRD+K NI+ + K+ D G A E D+ +
Sbjct: 126 TLLS-DISSALRYLHEN--RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA-KELDQGELC 181
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLI 258
+ GT+ YL P K + VD +S+G + E I+ +P + +W P+
Sbjct: 182 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF--------LPNWQ-PVQ 232
Query: 259 KEEKLRQVCDSRVGLPTFMEGAIK 282
K+R+ + + + + GA+K
Sbjct: 233 WHGKVREKSNEHIVVYDDLTGAVK 256
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 34/264 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G G V + I HQ G+ +AIK+ E+ N ++ EI+++ L N
Sbjct: 22 LGTGGFGYVLRWI---HQDTGEQ--VAIKQCRQ---ELSPKNRERWCLEIQIMKKLNHPN 73
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
VV+ + N LL ME+ G L L+ + G P R
Sbjct: 74 -------VVSAREVP-DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIR 124
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFD---SKWDAKLADFGLAVSESDESSM- 198
++ IS A++ LHEN IIHRD+K NI+ + K+ D G A E D+ +
Sbjct: 125 TLLS-DISSALRYLHEN--RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA-KELDQGELC 180
Query: 199 VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLI 258
+ GT+ YL P K + VD +S+G + E I+ +P + +W P+
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF--------LPNWQ-PVQ 231
Query: 259 KEEKLRQVCDSRVGLPTFMEGAIK 282
K+R+ + + + + GA+K
Sbjct: 232 WHGKVREKSNEHIVVYDDLTGAVK 255
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDN-SKKL 68
++K TE + +++G G+ G+VYK I DG++ + + +VL++N S K
Sbjct: 13 ILKETE-LRKVKVLGSGAFGTVYKGIW---IPDGENVKIPV------AIKVLRENTSPKA 62
Query: 69 NNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN 128
N EI L E+ Y + + S LV + MP G L D +
Sbjct: 63 NKEI-----LDEA------YVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRE 111
Query: 129 AAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
+LG + + MQI++ + L D ++HRD+ + N+L S K+ DFGL
Sbjct: 112 NRG----RLGSQDLLNWCMQIAKGMSYLE--DVRLVHRDLAARNVLVKSPNHVKITDFGL 165
Query: 189 A-VSESDESSMVQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPIDA 243
A + + DE+ G I ++ + + + DV+SYGV + E+++ KP D
Sbjct: 166 ARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 64
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 65 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGXLLDYVR 109
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 110 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 161
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 162 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 222 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 264
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 265 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 295
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAI 153
H R G G+S +L V +++P GSL D + A PQL + +QI++ +
Sbjct: 74 HAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQL----LLNWGVQIAKGM 128
Query: 154 QCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQPAGT-IGYLDP 210
L E+ ++HR++ + N+L S ++ADFG+A + D+ + A T I ++
Sbjct: 129 YYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 211 GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLR--QVCD 268
+ K + + DV+SYGV + E+++ A A + D L K E+L Q+C
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL---LEKGERLAQPQICT 243
Query: 269 SRVGL-------------PTFMEGA--IKQMLHVAARCVSSEEENRPGI 302
V + PTF E A +M R + + E+ PGI
Sbjct: 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGI 292
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 63
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 64 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGCLLDYVR 108
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 109 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 160
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 221 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 263
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 264 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 294
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 62 QDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGS 121
Q+ + K+ N ++ + + +R C + H R S+ LV + + G
Sbjct: 30 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 122 LYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
L++ + + QI ++ H N I+HRD+K N+L SK
Sbjct: 90 LFEDI-----VAREYYSEADASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKSKG 142
Query: 182 ---KLADFGLAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
KLADFGLA+ + D+ + AGT GYL P K VD+++ GV+L ++
Sbjct: 143 AAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Query: 238 RKPI 241
P
Sbjct: 203 YPPF 206
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 64
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 65 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGCLLDYVR 109
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 110 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 161
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 162 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 222 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 264
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 265 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 295
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 66
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 67 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGCLLDYVR 111
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 112 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 163
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 164 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 224 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 266
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 267 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 297
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGLA V E D + G I +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
S ++G+G+ +V++ H+ GD + AIK + F + ++ ++R L+
Sbjct: 14 SDILGQGATANVFRG---RHKKTGD--LFAIKVFNNISF------LRPVDVQMREFEVLK 62
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
+ N +N T+ R+ K+L+MEF P GSLY +L + A G
Sbjct: 63 KLNHKNIVKLFAIEEETTTRH---------KVLIMEFCPCGSLYTVLEEPSNA----YGL 109
Query: 140 PNR--VKIAMQISRAIQCLHENDPMIIHRDIKSTNILF----DSKWDAKLADFGLAVSES 193
P + + + + L EN I+HR+IK NI+ D + KL DFG A
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKLSK--------KVDVFSYGVVLLEIISCRKPIDAAR 245
D+ V GT YL P + L K VD++S GV + P
Sbjct: 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
Query: 246 DP 247
P
Sbjct: 228 GP 229
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 45/293 (15%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G +G VY+ + + K + T + L++++ ++ ++ + ++E
Sbjct: 19 LGGGQYGEVYEGVWK-------------KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI- 64
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++PN +V G R ++ EFM G+L D L +
Sbjct: 65 -KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLLDYLRECNRQEVSAV---VL 111
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+ +A QIS A++ L + + IHRD+ + N L K+ADFGL+ + ++
Sbjct: 112 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG 169
Query: 203 GT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKE 260
I + P +K S K DV+++GV+L EI + DP+ + + L+++
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE----LLEK 225
Query: 261 EKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
D R+ P EG +++ + C +RP EI F
Sbjct: 226 -------DYRMERP---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
L+V E + G L+ + + + +I I AIQ LH + I HRD+K
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTER---EASEIXKSIGEAIQYLHSIN--IAHRDVKP 189
Query: 171 TNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSY 227
N+L+ SK KL DFG A + +S+ P T Y+ P P K K D +S
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 228 GVVLLEIISCRKP 240
GV+ I+ C P
Sbjct: 250 GVIXY-ILLCGYP 261
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
++ + + + +G G++G V + +D T + I IK++S NS L +E+
Sbjct: 3 SDRYQRVKKLGSGAYGEV--LLCKDKLTGAERAIKIIKKSSVT----TTSNSGALLDEVA 56
Query: 74 VLSSLQESNKRNPNYC-VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
VL L +PN + F + N LVME G L+D +
Sbjct: 57 VLKQLD-----HPNIMKLYEF----------FEDKRNYYLVMEVYRGGELFDEI-----I 96
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK-WDA--KLADFGLA 189
+ + I Q+ LH+++ I+HRD+K N+L +SK DA K+ DFGL+
Sbjct: 97 LRQKFSEVDAAVIMKQVLSGTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Query: 190 VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
M + GT Y+ P K +K DV+S GV+L I+ C P
Sbjct: 155 AHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILY-ILLCGYP 203
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 65
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 66 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGCLLDYVR 110
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 111 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 162
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 163 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 223 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 265
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 266 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 296
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 67
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ C R G + S L+M+ MP G L D +
Sbjct: 68 ILDEAYVMASVD-----NPHVC---------RLLG-ICLTSTVQLIMQLMPFGCLLDYVR 112
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 113 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 164
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 165 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 225 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 267
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 268 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 298
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAI 153
H R G G+S +L V +++P GSL D + A PQL + +QI++ +
Sbjct: 92 HAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQL----LLNWGVQIAKGM 146
Query: 154 QCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDESSMVQPAGT-IGYLDP 210
L E+ ++HR++ + N+L S ++ADFG+A + D+ + A T I ++
Sbjct: 147 YYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 211 GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLR--QVCD 268
+ K + + DV+SYGV + E+++ A A + D L K E+L Q+C
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL---LEKGERLAQPQICT 261
Query: 269 SRVGL-------------PTFMEGA--IKQMLHVAARCVSSEEENRPGIG 303
V + PTF E A +M R + + E+ PGI
Sbjct: 262 IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIA 311
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 67
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 68 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 119
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 120 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 170
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 171 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+GS G V A + ++ G K++A+K+ Q + L NE+ ++ Q N
Sbjct: 32 IGEGSTGIVCIATV---RSSG--KLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN 82
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
VV + NS V +VMEF+ G+L D++ T ++
Sbjct: 83 -------VVEMY-----NSYLV--GDELWVVMEFLEGGALTDIV------THTRMNEEQI 122
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP- 201
+ + + +A+ LH +IHRDIKS +IL KL+DFG S E +
Sbjct: 123 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 180
Query: 202 AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT ++ P + +VD++S G++++E++ P
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAI 153
H R V ++ E+M GSL D L + ++ P + + QI+ +
Sbjct: 67 HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGG---KVLLPKLIDFSAQIAEGM 123
Query: 154 QCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPG 211
+ + IHRD+++ N+L K+ADFGLA V E +E + + A I + P
Sbjct: 124 AYIERKN--YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 181
Query: 212 YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII 251
N + K DV+S+G++L EI++ K R A ++
Sbjct: 182 AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 35/240 (14%)
Query: 6 DYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS 65
DY+EL+K E IG G V A H G+ ++AIK N L +
Sbjct: 4 DYDELLKYYELHET---IGTGGFAKVKLAC---HILTGE--MVAIKIMDKN---TLGSDL 52
Query: 66 KKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDL 125
++ EI L +L+ H C+ ++ + +V+E+ P G L+D
Sbjct: 53 PRIKTEIEALKNLR--------------HQHICQLYHVLETANKIFMVLEYCPGGELFDY 98
Query: 126 LHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
+ + + + RV + QI A+ +H HRD+K N+LFD KL D
Sbjct: 99 IISQDRLSEEE----TRV-VFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLID 151
Query: 186 FGL-AVSESDESSMVQP-AGTIGYLDPGYTN-PSKLSKKVDVFSYGVVLLEIISCRKPID 242
FGL A + ++ +Q G++ Y P S L + DV+S G++L ++ P D
Sbjct: 152 FGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LVME+ G ++D L + R K QI A+Q H+ I+HRD+K+
Sbjct: 91 LVMEYASGGEVFDYLVAHGRMKEKEA----RAKFR-QIVSAVQYCHQK--YIVHRDLKAE 143
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVV 230
N+L D + K+ADFG + + + + G+ Y P K +VDV+S GV+
Sbjct: 144 NLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 203
Query: 231 LLEIISCRKPIDA 243
L ++S P D
Sbjct: 204 LYTLVSGSLPFDG 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+GS G V A + ++ G K++A+K+ Q + L NE+ ++ Q N
Sbjct: 39 IGEGSTGIVCIATV---RSSG--KLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN 89
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
VV + NS V +VMEF+ G+L D++ T ++
Sbjct: 90 -------VVEMY-----NSYLV--GDELWVVMEFLEGGALTDIV------THTRMNEEQI 129
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP- 201
+ + + +A+ LH +IHRDIKS +IL KL+DFG S E +
Sbjct: 130 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 187
Query: 202 AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT ++ P + +VD++S G++++E++ P
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+GS G V A + ++ G K++A+K+ Q + L NE+ ++ Q N
Sbjct: 28 IGEGSTGIVCIATV---RSSG--KLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN 78
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
VV + NS V +VMEF+ G+L D++ T ++
Sbjct: 79 -------VVEMY-----NSYLV--GDELWVVMEFLEGGALTDIV------THTRMNEEQI 118
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP- 201
+ + + +A+ LH +IHRDIKS +IL KL+DFG S E +
Sbjct: 119 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 176
Query: 202 AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT ++ P + +VD++S G++++E++ P
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+GS G V A + ++ G K++A+K+ Q + L NE+ ++ Q N
Sbjct: 37 IGEGSTGIVCIATV---RSSG--KLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN 87
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
VV + NS V +VMEF+ G+L D++ T ++
Sbjct: 88 -------VVEMY-----NSYLV--GDELWVVMEFLEGGALTDIV------THTRMNEEQI 127
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP- 201
+ + + +A+ LH +IHRDIKS +IL KL+DFG S E +
Sbjct: 128 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 185
Query: 202 AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT ++ P + +VD++S G++++E++ P
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
S ++G+G+ +V++ H+ GD + AIK + F + ++ ++R L+
Sbjct: 14 SDILGQGATANVFRG---RHKKTGD--LFAIKVFNNISF------LRPVDVQMREFEVLK 62
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
+ N +N T+ R+ K+L+MEF P GSLY +L + A G
Sbjct: 63 KLNHKNIVKLFAIEEETTTRH---------KVLIMEFCPCGSLYTVLEEPSNA----YGL 109
Query: 140 PNR--VKIAMQISRAIQCLHENDPMIIHRDIKSTNILF----DSKWDAKLADFGLAVSES 193
P + + + + L EN I+HR+IK NI+ D + KL DFG A
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKLSK--------KVDVFSYGVVLLEIISCRKPIDAAR 245
D+ V GT YL P + L K VD++S GV + P
Sbjct: 168 DDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
Query: 246 DP 247
P
Sbjct: 228 GP 229
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 80
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 81 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 132
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 133 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 183
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 184 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 48/253 (18%)
Query: 2 AENFDYEELVKATESFSQS---------RLIGKGSHGSV-YKAILEDHQTDGDHKILAIK 51
AE YEE +A SF++ ++IG G G V Y + Q D I A+K
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 52 RASTNGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL 111
T + + +E ++ N ++ G R + +
Sbjct: 87 AGYT------ERQRRDFLSEASIMGQFDHPN-------IIRLEGVVTRGRLA-------M 126
Query: 112 LVMEFMPNGSLYDLL--HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+V E+M NGSL L H+ +G V M+ + +D +HRD+
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR--------YLSDLGYVHRDLA 178
Query: 170 STNILFDSKWDAKLADFGLA-VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----D 223
+ N+L DS K++DFGL+ V E D + G G + +T P ++ + D
Sbjct: 179 ARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG--GKIPIRWTAPEAIAFRTFSSASD 236
Query: 224 VFSYGVVLLEIIS 236
V+S+GVV+ E+++
Sbjct: 237 VWSFGVVMWEVLA 249
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 140/331 (42%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I+ ++ A++ +K+
Sbjct: 45 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATS------PKANKE 97
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ C R G + S L+ + MP G L D +
Sbjct: 98 ILDEAYVMASVD-----NPHVC---------RLLG-ICLTSTVQLITQLMPFGCLLDYVR 142
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 143 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 194
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 195 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 255 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 297
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 298 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 328
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 160 MKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 45/293 (15%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G G VY+ + + K + T + L++++ ++ ++ + ++E
Sbjct: 19 LGGGQFGEVYEGVWK-------------KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI- 64
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++PN +V G R ++ EFM G+L D L +
Sbjct: 65 -KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLLDYLRECNRQEVSAV---VL 111
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+ +A QIS A++ L + + IHRD+ + N L K+ADFGL+ + ++
Sbjct: 112 LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 203 GT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKE 260
I + P +K S K DV+++GV+L EI + DP+ + + L+++
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE----LLEK 225
Query: 261 EKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFF 313
D R+ P EG +++ + C +RP EI F
Sbjct: 226 -------DYRMERP---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAI 153
H R V ++ EFM GSL D L + ++ P + + QI+ +
Sbjct: 66 HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGG---KVLLPKLIDFSAQIAEGM 122
Query: 154 QCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPG 211
+ + IHRD+++ N+L K+ADFGLA V E +E + + A I + P
Sbjct: 123 AYIERKN--YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 180
Query: 212 YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII 251
N + K +V+S+G++L EI++ K R A ++
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 29/228 (12%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
F +L+GKG+ G K IL + G + + I + V +D E RVL
Sbjct: 152 EFEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVI---VAKDEVAHTLTENRVL 205
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
N R+P + + S + VME+ G L+ L +
Sbjct: 206 Q-----NSRHPFLTALKY---------SFQTHDRLCFVMEYANGGELFFHLSRERVFSE- 250
Query: 136 QLGWPNRVKI-AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-S 193
+R + +I A+ LH ++ +++RD+K N++ D K+ DFGL
Sbjct: 251 -----DRARFYGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 304
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
D ++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 305 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 48/253 (18%)
Query: 2 AENFDYEELVKATESFSQS---------RLIGKGSHGSV-YKAILEDHQTDGDHKILAIK 51
AE YEE +A SF++ ++IG G G V Y + Q D I A+K
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 52 RASTNGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL 111
T + + +E ++ N ++ G R + +
Sbjct: 87 AGYT------ERQRRDFLSEASIMGQFDHPN-------IIRLEGVVTRGRLA-------M 126
Query: 112 LVMEFMPNGSLYDLL--HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+V E+M NGSL L H+ +G V M+ + +D +HRD+
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR--------YLSDLGYVHRDLA 178
Query: 170 STNILFDSKWDAKLADFGLA-VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----D 223
+ N+L DS K++DFGL+ V E D + G G + +T P ++ + D
Sbjct: 179 ARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG--GKIPIRWTAPEAIAFRTFSSASD 236
Query: 224 VFSYGVVLLEIIS 236
V+S+GVV+ E+++
Sbjct: 237 VWSFGVVMWEVLA 249
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 144 KIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAG 203
KIA+ I +A++ LH + +IHRD+K +N+L ++ K DFG++ D+ + AG
Sbjct: 140 KIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAG 198
Query: 204 TIGYLDPGYTNPS----KLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIK 259
Y P NP S K D++S G+ +E+ R P D+ W P
Sbjct: 199 CKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS---------WGTPF-- 247
Query: 260 EEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEI 305
++L+QV + LP A + + ++C+ + RP E+
Sbjct: 248 -QQLKQVVEEPSPQLPADKFSA--EFVDFTSQCLKKNSKERPTYPEL 291
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L T L P V +A QI+ + + + +HRD+++
Sbjct: 255 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 309
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 370 LLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L T L P V +A QI+ + + + +HRD+++
Sbjct: 255 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 309
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 370 LLTELTT 376
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F + + +G GS G V +L H+ G+H A+K L+ LN E R+
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNH--YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L + VNF + S NSN +VME++ G ++ L +
Sbjct: 95 LQA-------------VNFPFL-VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
P + A QI + LH D +I+RD+K N+L D + ++ DFG A
Sbjct: 141 PHARF-----YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWA 254
+ + GT L P +K VD ++ GV++ E+ + P A P I +
Sbjct: 194 RTWXL--CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE-- 248
Query: 255 LPLIKEEKLRQVCDSRVGLPTFMEGAIKQML 285
++ +V P+ +K +L
Sbjct: 249 ----------KIVSGKVRFPSHFSSDLKDLL 269
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L T L P V +A QI+ + + + +HRD+++
Sbjct: 79 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 133
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 134 NILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 193
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 194 LLTELTT 200
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 29/228 (12%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
F +L+GKG+ G K IL + G + + I + V +D E RVL
Sbjct: 149 EFEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVI---VAKDEVAHTLTENRVL 202
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
N R+P + + S + VME+ G L+ L +
Sbjct: 203 Q-----NSRHPFLTALKY---------SFQTHDRLCFVMEYANGGELFFHLSRERVFSE- 247
Query: 136 QLGWPNRVKI-AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-S 193
+R + +I A+ LH ++ +++RD+K N++ D K+ DFGL
Sbjct: 248 -----DRARFYGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
D ++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 72
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 73 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 124
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 125 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 175
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 176 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+GS G V A + ++ G K++A+K+ Q + L NE+ ++ Q N
Sbjct: 82 IGEGSTGIVCIATV---RSSG--KLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN 132
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
VV + NS V +VMEF+ G+L D++ T ++
Sbjct: 133 -------VVEMY-----NSYLV--GDELWVVMEFLEGGALTDIV------THTRMNEEQI 172
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP- 201
+ + + +A+ LH +IHRDIKS +IL KL+DFG S E +
Sbjct: 173 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 230
Query: 202 AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT ++ P + +VD++S G++++E++ P
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 95
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 96 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 147
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 148 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 198
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 199 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 130
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAGTIGYLDPG 211
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G G +
Sbjct: 131 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG--GKIPIR 186
Query: 212 YTNPS-----KLSKKVDVFSYGVVLLEIIS 236
+T+P K + DV+SYG+VL E++S
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 101
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 102 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 153
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 154 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 204
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 205 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 32/235 (13%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
+ TE + +GKG+ V + + K+LA + + + N+KKL+
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCV----------KVLAGQE-----YAAMIINTKKLS- 50
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
+ + +R C + H R S+ + L+ + + G L++ +
Sbjct: 51 -----ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI---- 101
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA---KLADFG 187
+ QI A+ LH + ++HR++K N+L SK KLADFG
Sbjct: 102 -VAREYYSEADASHCIQQILEAV--LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFG 158
Query: 188 LAVS-ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
LA+ E ++ + AGT GYL P K VD+++ GV+L ++ P
Sbjct: 159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L T L P V +A QI+ + + + +HRD+++
Sbjct: 82 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 136
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 137 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 196
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 197 LLTELTT 203
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 147
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 148 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 157
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 158 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 103
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 104 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 155
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 156 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 206
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 207 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
L+ME+ G ++D L + R QI A+Q H+ I+HRD+K+
Sbjct: 88 LIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQYCHQK--RIVHRDLKAE 140
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVV 230
N+L D+ + K+ADFG + + + G+ Y P K +VDV+S GV+
Sbjct: 141 NLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 200
Query: 231 LLEIISCRKPIDA 243
L ++S P D
Sbjct: 201 LYTLVSGSLPFDG 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L T L P V +A QI+ + + + +HRD+++
Sbjct: 338 IVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 392
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 393 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 452
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 453 LLTELTT 459
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V+E+M GSL D L L P V +A QI+ + + + +HRD+++
Sbjct: 89 IVIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 204 LLTELTT 210
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 29/227 (12%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +L+GKG+ G K IL + G + + I + V +D E RVL
Sbjct: 10 FEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVI---VAKDEVAHTLTENRVLQ 63
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
N R+P + + S + VME+ G L+ L +
Sbjct: 64 -----NSRHPFLTALKY---------SFQTHDRLCFVMEYANGGELFFHLSRERVFSE-- 107
Query: 137 LGWPNRVKI-AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SD 194
+R + +I A+ LH ++ +++RD+K N++ D K+ DFGL D
Sbjct: 108 ----DRARFYGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 162
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 163 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 29/227 (12%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +L+GKG+ G K IL + G + + I + V +D E RVL
Sbjct: 11 FEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVI---VAKDEVAHTLTENRVLQ 64
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
N R+P + + S + VME+ G L+ L +
Sbjct: 65 -----NSRHPFLTALKY---------SFQTHDRLCFVMEYANGGELFFHLSRERVFSE-- 108
Query: 137 LGWPNRVKI-AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SD 194
+R + +I A+ LH ++ +++RD+K N++ D K+ DFGL D
Sbjct: 109 ----DRARFYGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 163
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 128/315 (40%), Gaps = 47/315 (14%)
Query: 1 MAENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEV 60
M+ N+D E+ + + +G G +G VY+ + + K + T +
Sbjct: 3 MSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKT 47
Query: 61 LQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG 120
L++++ ++ ++ + ++E ++PN +V G R ++ EFM G
Sbjct: 48 LKEDTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYG 96
Query: 121 SLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
+L D L + + +A QIS A++ L + + IHRD+ + N L
Sbjct: 97 NLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHL 151
Query: 181 AKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCR 238
K+ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 152 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-- 209
Query: 239 KPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEEN 298
P ID + EK D R+ P EG +++ + C +
Sbjct: 210 ----YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSD 257
Query: 299 RPGIGEILMGCSCFF 313
RP EI F
Sbjct: 258 RPSFAEIHQAFETMF 272
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 105
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 106 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 157
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 158 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 208
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 209 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 146
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 147 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 198
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 199 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 249
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 250 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E+M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL V E D + G I +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 29/227 (12%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +L+GKG+ G K IL + G + + I + V +D E RVL
Sbjct: 12 FEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVI---VAKDEVAHTLTENRVLQ 65
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
N R+P + + S + VME+ G L+ L +
Sbjct: 66 -----NSRHPFLTALKY---------SFQTHDRLCFVMEYANGGELFFHLSRERVFSE-- 109
Query: 137 LGWPNRVKI-AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SD 194
+R + +I A+ LH ++ +++RD+K N++ D K+ DFGL D
Sbjct: 110 ----DRARFYGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 164
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
++M GT YL P + + VD + GVV+ E++ R P
Sbjct: 165 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V+E+M GSL D L L P V +A QI+ + + + +HRD+++
Sbjct: 89 IVIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 204 LLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+VME+M G L D L L P V +A QI+ + + + +HRD+++
Sbjct: 89 IVMEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 204 LLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L T L P V +A QI+ + + + +HRD+++
Sbjct: 255 IVGEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 309
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 370 LLTELTT 376
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+GS G V A + ++ G K++A+K+ Q + L NE+ ++ Q N
Sbjct: 159 IGEGSTGIVCIATV---RSSG--KLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHEN 209
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
VV + NS V +VMEF+ G+L D++ T ++
Sbjct: 210 -------VVEMY-----NSYLV--GDELWVVMEFLEGGALTDIV------THTRMNEEQI 249
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP- 201
+ + + +A+ LH +IHRDIKS +IL KL+DFG S E +
Sbjct: 250 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 307
Query: 202 AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT ++ P + +VD++S G++++E++ P
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 30/240 (12%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
+ ++ F Q +G G++ +VYK + ++T G + +A+K + E + +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGL---NKTTGVY--VALKEVKLDSEEGTPSTAIR--- 52
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNA 129
EI ++ L+ N +V + V NKL LV EFM N L + +
Sbjct: 53 EISLMKELKHEN-------IVRLY--------DVIHTENKLTLVFEFMDN-DLKKYMDSR 96
Query: 130 AAATTPQLGWPNRVK-IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
TP+ N VK Q+ + + HEN I+HRD+K N+L + + KL DFGL
Sbjct: 97 TVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGL 154
Query: 189 AVSES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCRKPIDAARD 246
A + ++ T+ Y P S+ S +D++S G +L E+I+ + D
Sbjct: 155 ARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
L+ME+ G ++D L + R QI A+Q H+ I+HRD+K+
Sbjct: 91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQYCHQK--RIVHRDLKAE 143
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVV 230
N+L D+ + K+ADFG + + + G Y P K +VDV+S GV+
Sbjct: 144 NLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 203
Query: 231 LLEIISCRKPIDA 243
L ++S P D
Sbjct: 204 LYTLVSGSLPFDG 216
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
++F ++G G+ V+ +++ T + IK++ +D+S L NEI V
Sbjct: 9 KTFIFMEVLGSGAFSEVF--LVKQRLTGKLFALKCIKKSPA-----FRDSS--LENEIAV 59
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N +V + ++ LVM+ + G L+D + T
Sbjct: 60 LKKIKHEN-------IVTLEDI-------YESTTHYYLVMQLVSGGELFDRILERGVYTE 105
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF---DSKWDAKLADFGLAVS 191
+ Q+ A++ LHEN I+HRD+K N+L+ + + DFGL+
Sbjct: 106 KDASL-----VIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158
Query: 192 ESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
E + M GT GY+ P SK VD +S GV+ I+ C P
Sbjct: 159 EQN-GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITY-ILLCGYP 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 48
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R +++EFM G+L
Sbjct: 49 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIIIEFMTYGNLL 97
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 98 DYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 152
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 208 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 259 FAEIHQAFETMF 270
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 123/280 (43%), Gaps = 49/280 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQ + K N E++++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQGKAFK-NRELQIM 67
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 68 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 119
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 120 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 170
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEIISCRK--PIDAA 244
+V+ + Y+ Y +L + +DV+S G VL E++ + P D+
Sbjct: 171 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
Query: 245 RDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQM 284
D I L E++R++ P + E A Q+
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMN------PNYTEFAFPQI 262
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 57
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 58 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 102
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 103 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 154
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 155 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 214
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 215 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 257
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 258 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 288
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 129/314 (41%), Gaps = 51/314 (16%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 48
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R +++EFM G+L
Sbjct: 49 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIIIEFMTYGNLL 97
Query: 124 DLLH--NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
D L N + L + +A QIS A++ L + + IHRD+ + N L
Sbjct: 98 DYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLV 150
Query: 182 KLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
K+ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT--- 207
Query: 240 PIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
P ID + EK D R+ P EG +++ + C +R
Sbjct: 208 ---YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDR 256
Query: 300 PGIGEILMGCSCFF 313
P EI F
Sbjct: 257 PSFAEIHQAFETMF 270
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G+ GSV + + + D I +K+ + +++++ E +++ L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA------DTEEMMREAQIMHQLD--- 394
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
NP +V G C+ +LVME G L+ L ++ N
Sbjct: 395 --NPY--IVRLIGV-CQAEAL-------MLVMEMAGGGPLHKFL----VGKREEIPVSNV 438
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL--AVSESDESSMVQ 200
++ Q+S ++ L E + +HR++ + N+L ++ AK++DFGL A+ D +
Sbjct: 439 AELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496
Query: 201 PAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPIDAARDP 247
AG + + P N K S + DV+SYGV + E +S +KP + P
Sbjct: 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 546
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 5 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 49
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R +++EFM G+L
Sbjct: 50 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIIIEFMTYGNLL 98
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 99 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 153
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 154 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 208
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 209 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 259
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 260 FAEIHQAFETMF 271
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 128/320 (40%), Gaps = 63/320 (19%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLN- 69
++ F + ++G+G+ G V KA + D + AIK+ ++ +KL+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKA-----RNALDSRYYAIKK--------IRHTEEKLST 48
Query: 70 --NEIRVLSSLQESNKRNPNYCVVNFHGTSCRNS-----GSVDGNSNKLLVMEFMPNGSL 122
+E+ +L+SL N Y V + R + +V S + E+ N +L
Sbjct: 49 ILSEVXLLASL------NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL 102
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAK 182
YDL+H+ W ++ QI A+ +H IIHR++K NI D + K
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG--IIHRNLKPXNIFIDESRNVK 156
Query: 183 LADFGLA--VSES-------------DESSMVQPAGTIGYLDPGYTNPS-KLSKKVDVFS 226
+ DFGLA V S ++ GT Y+ + + ++K+D +S
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYS 216
Query: 227 YGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLH 286
G++ E I P + +I+ +KLR V S P F + K
Sbjct: 217 LGIIFFEXIY---PFSTGXERVNIL---------KKLRSV--SIEFPPDFDDNKXKVEKK 262
Query: 287 VAARCVSSEEENRPGIGEIL 306
+ + + RPG +L
Sbjct: 263 IIRLLIDHDPNKRPGARTLL 282
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E +R++G+G G VY+ + +H+ G+ +A+K + DN +K +E
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKD---CTLDNKEKFMSEA 60
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL-YDLLHNAAA 131
++ +L + +V G + ++ME P G L + L N +
Sbjct: 61 VIMKNLDHPH-------IVKLIG--------IIEEEPTWIIMELYPYGELGHYLERNKNS 105
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
L V ++QI +A+ L + +HRDI NIL S KL DFGL+
Sbjct: 106 LKVLTL-----VLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRY 158
Query: 192 ESDESSMVQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
DE I ++ P N + + DV+ + V + EI+S
Sbjct: 159 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L L P V +A QI+ + + + +HRD+++
Sbjct: 89 IVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 204 LLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L L P V +A QI+ + + + +HRD+++
Sbjct: 89 IVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 204 LLTELTT 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 53
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R +++EFM G+L
Sbjct: 54 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIIIEFMTYGNLL 102
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 103 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 157
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 213 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 263
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 264 FAEIHQAFETMF 275
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQ + K N E++++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQGKAFK-NRELQIM 67
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 68 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 119
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 120 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSA---- 170
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKL-------SKKVDVFSYGVVLLEII 235
+V+ + Y+ Y +L + +DV+S G VL E++
Sbjct: 171 --KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L L P V +A QI+ + + + +HRD+++
Sbjct: 80 IVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 134
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 135 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 195 LLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L L P V +A QI+ + + + +HRD+++
Sbjct: 78 IVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 132
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 133 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 192
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 193 LLTELTT 199
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E +R++G+G G VY+ + +H+ G+ +A+K + DN +K +E
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKD---CTLDNKEKFMSEA 76
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL-YDLLHNAAA 131
++ +L + +V G + ++ME P G L + L N +
Sbjct: 77 VIMKNLDHPH-------IVKLIG--------IIEEEPTWIIMELYPYGELGHYLERNKNS 121
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
L V ++QI +A+ L + +HRDI NIL S KL DFGL+
Sbjct: 122 LKVLTL-----VLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRY 174
Query: 192 ESDESSMVQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
DE I ++ P N + + DV+ + V + EI+S K
Sbjct: 175 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 63
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 64 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGXLLDYVR 108
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 109 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 160
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 221 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 263
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 264 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 294
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 67
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 68 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGCLLDYVR 112
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 113 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 164
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FG A E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 165 FGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 225 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 267
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 268 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 298
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 66
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 67 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 111
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 112 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 163
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 164 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 224 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 266
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 267 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 297
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 102 GSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRAIQCLHEND 160
G V + ++V E+M NGSL L N T QL V + IS ++ L +D
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL-----VGMLRGISAGMKYL--SD 142
Query: 161 PMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYLDPGYTNPS 216
+HRD+ + NIL +S K++DFGL+ V E D + G I + P
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 217 KLSKKVDVFSYGVVLLEIIS 236
K + DV+SYG+V+ E++S
Sbjct: 203 KFTSASDVWSYGIVMWEVVS 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 63
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 64 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 108
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 109 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 160
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 221 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 263
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 264 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 294
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 69
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ C R G + S L+ + MP G L D +
Sbjct: 70 ILDEAYVMASVD-----NPHVC---------RLLG-ICLTSTVQLITQLMPFGCLLDYVR 114
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 115 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 166
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 167 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 227 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 269
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 270 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 300
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
A E +R++G+G G VY+ + +H+ G+ +A+K + DN +K +E
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKD---CTLDNKEKFMSEA 64
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL-YDLLHNAAA 131
++ +L + +V G + ++ME P G L + L N +
Sbjct: 65 VIMKNLDHPH-------IVKLIG--------IIEEEPTWIIMELYPYGELGHYLERNKNS 109
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
L V ++QI +A+ L + +HRDI NIL S KL DFGL+
Sbjct: 110 LKVLTL-----VLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRY 162
Query: 192 ESDESSMVQPAG--TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
DE I ++ P N + + DV+ + V + EI+S K
Sbjct: 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 88
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 89 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 133
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 134 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 185
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 186 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 245
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 246 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 288
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 289 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 319
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++ G+ G+VYK I E + I ++ A++ +K+
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 70
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 71 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGCLLDYVR 115
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 116 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 167
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 168 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 228 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 270
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 271 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 301
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L L P V +A QI+ + + + +HRD+++
Sbjct: 89 IVCEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 204 LLTELTT 210
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 66
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 67 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 111
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 112 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 163
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 164 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 224 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 266
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 267 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 297
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 127/315 (40%), Gaps = 47/315 (14%)
Query: 1 MAENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEV 60
M N+D E+ + + +G G +G VY+ + + K + T +
Sbjct: 3 MDPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKT 47
Query: 61 LQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG 120
L++++ ++ ++ + ++E ++PN +V G R ++ EFM G
Sbjct: 48 LKEDTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYG 96
Query: 121 SLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
+L D L + + +A QIS A++ L + + IHRD+ + N L
Sbjct: 97 NLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHL 151
Query: 181 AKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCR 238
K+ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 152 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-- 209
Query: 239 KPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEEN 298
P ID + EK D R+ P EG +++ + C +
Sbjct: 210 ----YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSD 257
Query: 299 RPGIGEILMGCSCFF 313
RP EI F
Sbjct: 258 RPSFAEIHQAFETMF 272
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 5 FDYEELVKATESFSQS---------RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRAST 55
F +E+ +A F++ ++IG G G V L + G +I +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHL---KLPGKREIFVAIKTLK 70
Query: 56 NGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVME 115
+G+ + + +E ++ N V++ G V ++ +++ E
Sbjct: 71 SGYT--EKQRRDFLSEASIMGQFDHPN-------VIHLEGV-------VTKSTPVMIITE 114
Query: 116 FMPNGSLYDLL-HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNIL 174
FM NGSL L N T QL V + I+ ++ L + + +HRD+ + NIL
Sbjct: 115 FMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGMKYLADMN--YVHRDLAARNIL 167
Query: 175 FDSKWDAKLADFGLA-VSESDESSMVQPAGTIGYLDPGYTNPS-----KLSKKVDVFSYG 228
+S K++DFGL+ E D S + G + +T P K + DV+SYG
Sbjct: 168 VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 227
Query: 229 VVLLEIIS 236
+V+ E++S
Sbjct: 228 IVMWEVMS 235
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV E+ G ++D L + R K QI A+Q H+ I+HRD+K+
Sbjct: 90 LVXEYASGGEVFDYLVAHGRXKEKEA----RAKF-RQIVSAVQYCHQK--FIVHRDLKAE 142
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVV 230
N+L D+ + K+ADFG + + + + G Y P K +VDV+S GV+
Sbjct: 143 NLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 231 LLEIISCRKPIDA 243
L ++S P D
Sbjct: 203 LYTLVSGSLPFDG 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 51/314 (16%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 48
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 49 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 97
Query: 124 DLLH--NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
D L N + L + +A QIS A++ L + + IHRD+ + N L
Sbjct: 98 DYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLV 150
Query: 182 KLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
K+ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT--- 207
Query: 240 PIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
P ID + EK D R+ P EG +++ + C +R
Sbjct: 208 ---YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDR 256
Query: 300 PGIGEILMGCSCFF 313
P EI F
Sbjct: 257 PSFAEIHQAFETMF 270
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 65
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 66 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGCLLDYVR 110
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 111 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 162
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FG A E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 163 FGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 223 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 265
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 266 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 296
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R++ +G VY+A Q G + A+KR +N ++ ++ + E+ + L
Sbjct: 34 RVLAEGGFAFVYEA-----QDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKL-- 82
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
+PN +V F + D + L++ + G L + L + L
Sbjct: 83 --SGHPN--IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP--LSCD 136
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+KI Q RA+Q +H P IIHRD+K N+L ++ KL DFG A +
Sbjct: 137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
S+ +G+G V + I + + K L +R QD ++ +EI VL
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-------QDCRAEILHEIAVL---- 82
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
E K P V+N H + S +L++E+ G ++ L A +
Sbjct: 83 ELAKSCPR--VINLHEV-------YENTSEIILILEYAAGGEIFSLCLPELAEMVSE--- 130
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW---DAKLADFGLAVSESDES 196
+ +++ QI + LH+N+ I+H D+K NIL S + D K+ DFG++
Sbjct: 131 NDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
+ + GT YL P N ++ D+++ G++ +++ P
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 70
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ C R G + S L+ + MP G L D +
Sbjct: 71 ILDEAYVMASVD-----NPHVC---------RLLG-ICLTSTVQLITQLMPFGCLLDYVR 115
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 116 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 167
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 168 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 228 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 270
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 271 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 301
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 68
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 69 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 120
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 121 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 175
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 176 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 65
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 66 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 110
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 111 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 162
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 163 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 223 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 265
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 266 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 296
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 73
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 74 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 118
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 119 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 170
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 171 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 230
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 231 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMRKCWMIDADSR 273
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 274 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 304
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 67
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 68 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 119
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 120 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L T L P V ++ QI+ + + + +HRD+++
Sbjct: 86 IVTEYMNKGSLLDFLK---GETGKYLRLPQLVDMSAQIASGMAYVERMN--YVHRDLRAA 140
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 141 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 201 LLTELTT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 48
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 49 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 97
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 98 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 152
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 208 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 259 FAEIHQAFETMF 270
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 67
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 68 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 119
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 120 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 53
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 54 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 102
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 103 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 157
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 213 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 263
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 264 FAEIHQAFETMF 275
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 48
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 49 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 97
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 98 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 152
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 208 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 259 FAEIHQAFETMF 270
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 8 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 52
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 53 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 101
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 102 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 156
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 157 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 211
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 212 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 262
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 263 FAEIHQAFETMF 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 53
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 54 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 102
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 103 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 157
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 158 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 213 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 263
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 264 FAEIHQAFETMF 275
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 48
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 49 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 97
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 98 DYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 152
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 208 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 258
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 259 FAEIHQAFETMF 270
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 51/314 (16%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 53
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 54 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 102
Query: 124 DLLH--NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
D L N + L + +A QIS A++ L + + IHRD+ + N L
Sbjct: 103 DYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLV 155
Query: 182 KLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
K+ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT--- 212
Query: 240 PIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
P ID + EK D R+ P EG +++ + C +R
Sbjct: 213 ---YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDR 261
Query: 300 PGIGEILMGCSCFF 313
P EI F
Sbjct: 262 PSFAEIHQAFETMF 275
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 71
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 72 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 123
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 124 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 178
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 179 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 86
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 87 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 138
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 139 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 193
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 194 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
++Q + IG+G++G V A +T +AIK+ S FE Q ++ EI++L
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTR-----VAIKKISP--FE-HQTYCQRTLREIQILL 96
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
+ N V+ + +++ + +V + M LY LL + Q
Sbjct: 97 RFRHEN-------VIGIR--DILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQ------Q 140
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV---SES 193
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA E
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEH 198
Query: 194 DESS-MVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
D + + + T Y P N +K +D++S G +L E++S R
Sbjct: 199 DHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 75
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 76 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 127
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 128 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 182
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 183 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 89/229 (38%), Gaps = 17/229 (7%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
AT + IG G++G+VYKA H + NG E+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA----RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
+L L+ N VV C S + D LV E + DL A
Sbjct: 63 ALLRRLEAFEHPN----VVRLMDV-CATSRT-DREIKVTLVFEHVDQ----DLRTYLDKA 112
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
P L + Q R + LH N I+HRD+K NIL S KLADFGLA
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARIY 170
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S + ++ T+ Y P S + VD++S G + E+ RKP+
Sbjct: 171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 79
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 80 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 131
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 132 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 39/249 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ + S+ +G G+ G V A KI++ KR G D + + EI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 75 LSSLQESNKRNPNYCVV---NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNA 129
L L C++ NF + +V+E M G L+D + +
Sbjct: 69 LKKLNHP-------CIIKIKNFFDAE-----------DYYIVLELMEGGELFDKVVGNKR 110
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD---AKLADF 186
T +L + Q+ A+Q LHEN IIHRD+K N+L S+ + K+ DF
Sbjct: 111 LKEATCKLYF-------YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 187 GLAVSESDESSMVQPAGTIGYLDPGY---TNPSKLSKKVDVFSYGVVLLEIISCRKPIDA 243
G + + S M GT YL P + ++ VD +S GV+L +S P
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 244 ARDPASIID 252
R S+ D
Sbjct: 222 HRTQVSLKD 230
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 57/311 (18%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 63
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 64 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 108
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 109 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 160
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 221 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMRKCWMIDADSR 263
Query: 300 PGIGEILMGCS 310
P E+++ S
Sbjct: 264 PKFRELIIEFS 274
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 66
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 67 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 111
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 112 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 163
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 164 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 224 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMRKCWMIDADSR 266
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 267 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 297
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E M NGSL L + A T QL V + I+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 130
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAGTIGYLDPG 211
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G G +
Sbjct: 131 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG--GKIPIR 186
Query: 212 YTNPS-----KLSKKVDVFSYGVVLLEIIS 236
+T+P K + DV+SYG+VL E++S
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 39/249 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ + S+ +G G+ G V A KI++ KR G D + + EI +
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 67
Query: 75 LSSLQESNKRNPNYCVV---NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNA 129
L L C++ NF + +V+E M G L+D + +
Sbjct: 68 LKKLNHP-------CIIKIKNFFDAE-----------DYYIVLELMEGGELFDKVVGNKR 109
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD---AKLADF 186
T +L + Q+ A+Q LHEN IIHRD+K N+L S+ + K+ DF
Sbjct: 110 LKEATCKLYF-------YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDF 160
Query: 187 GLAVSESDESSMVQPAGTIGYLDPGY---TNPSKLSKKVDVFSYGVVLLEIISCRKPIDA 243
G + + S M GT YL P + ++ VD +S GV+L +S P
Sbjct: 161 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
Query: 244 ARDPASIID 252
R S+ D
Sbjct: 221 HRTQVSLKD 229
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 28/230 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ F R +GKG G+VY A + H I+A+K + E + +L EI +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLA-----REKKSHFIVALKVLFKSQIEK-EGVEHQLRREIEI 76
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ L H R L++E+ P G LY L +
Sbjct: 77 QAHLH--------------HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE 122
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ I +++ A+ H +IHRDIK N+L K + K+ADFG +V
Sbjct: 123 QRTA-----TIMEELADALMYCHGKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAPS 175
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
GT+ YL P ++KVD++ GV+ E++ P ++A
Sbjct: 176 LRRKTM-CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESA 224
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 79
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 80 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 131
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 132 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 67
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 68 RKLDHCNIVRLRY----FFYSSGEKKDVVYLN----LVLDYVPETVYRVARHYSRAKQTL 119
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 120 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEII 235
V + Y P + + +DV+S G VL E++
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 39/249 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ + S+ +G G+ G V A KI++ KR G D + + EI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 75 LSSLQESNKRNPNYCVV---NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNA 129
L L C++ NF + +V+E M G L+D + +
Sbjct: 69 LKKLNHP-------CIIKIKNFFDAE-----------DYYIVLELMEGGELFDKVVGNKR 110
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD---AKLADF 186
T +L + Q+ A+Q LHEN IIHRD+K N+L S+ + K+ DF
Sbjct: 111 LKEATCKLYF-------YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 187 GLAVSESDESSMVQPAGTIGYLDPGY---TNPSKLSKKVDVFSYGVVLLEIISCRKPIDA 243
G + + S M GT YL P + ++ VD +S GV+L +S P
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 244 ARDPASIID 252
R S+ D
Sbjct: 222 HRTQVSLKD 230
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 92 NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISR 151
N G + S ++ L+ + GSLYD L T L +I + I+
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIAS 116
Query: 152 AIQCLH------ENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA--- 202
+ LH + P I HRD+KS NIL +AD GLAV S ++ +
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 203 --GTIGYLDPGYTNPS------KLSKKVDVFSYGVVLLEI 234
GT Y+ P + + K+VD++++G+VL E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 17 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 61
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 62 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPFY-------IITEFMTYGNLL 110
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 111 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 165
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 166 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 220
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 221 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 271
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 272 FAEIHQAFETMF 283
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L T L P V ++ QI+ + + + +HRD+++
Sbjct: 86 IVTEYMNKGSLLDFLK---GETGKYLRLPQLVDMSAQIASGMAYVERMN--YVHRDLRAA 140
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 141 NILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 201 LLTELTT 207
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 39/249 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ + S+ +G G+ G V A KI++ KR G D + + EI +
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 74
Query: 75 LSSLQESNKRNPNYCVV---NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNA 129
L L C++ NF + +V+E M G L+D + +
Sbjct: 75 LKKLNHP-------CIIKIKNFFDAE-----------DYYIVLELMEGGELFDKVVGNKR 116
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD---AKLADF 186
T +L + Q+ A+Q LHEN IIHRD+K N+L S+ + K+ DF
Sbjct: 117 LKEATCKLYF-------YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDF 167
Query: 187 GLAVSESDESSMVQPAGTIGYLDPGY---TNPSKLSKKVDVFSYGVVLLEIISCRKPIDA 243
G + + S M GT YL P + ++ VD +S GV+L +S P
Sbjct: 168 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
Query: 244 ARDPASIID 252
R S+ D
Sbjct: 228 HRTQVSLKD 236
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 59 EVLQDNSKKLNNEIRVLSSLQESN--KRNPNYCVV-----NFHGTSCRNSGSVDGNSNKL 111
EV + + + N +++ SS E + + Y V N G + S ++
Sbjct: 23 EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLH------ENDPMIIH 165
L+ + GSLYD L T L +I + I+ + LH + P I H
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA-----GTIGYLDPGYTNPS---- 216
RD+KS NIL +AD GLAV S ++ + GT Y+ P + +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVD 196
Query: 217 --KLSKKVDVFSYGVVLLEI 234
K+VD++++G+VL E+
Sbjct: 197 CFDSYKRVDIWAFGLVLWEV 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 40/244 (16%)
Query: 9 ELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKL 68
+L E + ++IG+G+ G V L H++ K+ A+K S FE+++ +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQ---LVRHKST--RKVYAMKLLSK--FEMIKRSDSAF 120
Query: 69 NNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN 128
E R + + N + V F+ + + +VME+MP G L +L+ N
Sbjct: 121 FWEERDIMAFA-----NSPWVVQLFY--------AFQDDRYLYMVMEYMPGGDLVNLMSN 167
Query: 129 AAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
+ V +A+ AI + IHRD+K N+L D KLADFG
Sbjct: 168 YDVPEKWARFYTAEVVLALD---AIHSMG-----FIHRDVKPDNMLLDKSGHLKLADFGT 219
Query: 189 AVSESDESSMVQPAGTIGYLDPGYTNPSKL---------SKKVDVFSYGVVLLEIISCRK 239
+ + E MV+ +G P Y +P L ++ D +S GV L E++
Sbjct: 220 CMKMNKE-GMVRCDTAVG--TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
Query: 240 PIDA 243
P A
Sbjct: 277 PFYA 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 39/249 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ + S+ +G G+ G V A KI++ KR G D + + EI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 75 LSSLQESNKRNPNYCVV---NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNA 129
L L C++ NF + +V+E M G L+D + +
Sbjct: 69 LKKLNHP-------CIIKIKNFFDAE-----------DYYIVLELMEGGELFDKVVGNKR 110
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD---AKLADF 186
T +L + Q+ A+Q LHEN IIHRD+K N+L S+ + K+ DF
Sbjct: 111 LKEATCKLYF-------YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 187 GLAVSESDESSMVQPAGTIGYLDPGY---TNPSKLSKKVDVFSYGVVLLEIISCRKPIDA 243
G + + S M GT YL P + ++ VD +S GV+L +S P
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 244 ARDPASIID 252
R S+ D
Sbjct: 222 HRTQVSLKD 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
LVME + G L++ + + + + R K+ +S H +D ++HRD+K
Sbjct: 82 FLVMELLNGGELFERIKKKKHFSETEASYIMR-KLVSAVS------HMHDVGVVHRDLKP 134
Query: 171 TNILFDSKWD---AKLADFGLA-VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFS 226
N+LF + D K+ DFG A + D + P T+ Y P N + + D++S
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWS 194
Query: 227 YGVVLLEIISCRKPIDA 243
GV+L ++S + P +
Sbjct: 195 LGVILYTMLSGQVPFQS 211
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 65
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+M+ MP G L D +
Sbjct: 66 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLIMQLMPFGCLLDYVR 110
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 111 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 162
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FG A E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 163 FGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 223 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMRKCWMIDADSR 265
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 266 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 296
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 138/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 60
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 61 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 105
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI+ + L D ++HRD+ + N+L + K+ D
Sbjct: 106 EHKDNIGSQYLLNW------CVQIAEGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 157
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 158 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 217
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 218 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 260
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 261 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 291
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 47/312 (15%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
N+D E+ + + +G G +G VY+ + + K + T + L++
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWK-------------KYSLTVAVKTLKE 53
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLY 123
++ ++ ++ + ++E ++PN +V G R ++ EFM G+L
Sbjct: 54 DTMEVEEFLKEAAVMKEI--KHPN--LVQLLGVCTREPPF-------YIITEFMTYGNLL 102
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
D L + + +A QIS A++ L + + IHRD+ + N L K+
Sbjct: 103 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKV 157
Query: 184 ADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
P ID + EK D R+ P EG +++ + C +RP
Sbjct: 213 -YGMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNPSDRPS 263
Query: 302 IGEILMGCSCFF 313
EI F
Sbjct: 264 FAEIHQAFETMF 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLH------ENDPMIIH 165
L+ + GSLYD L T L +I + I+ + LH + P I H
Sbjct: 112 LITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQGKPAIAH 165
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA-----GTIGYLDPGYTNPS---- 216
RD+KS NIL +AD GLAV S ++ + GT Y+ P + +
Sbjct: 166 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVD 225
Query: 217 --KLSKKVDVFSYGVVLLEI 234
K+VD++++G+VL E+
Sbjct: 226 CFDSYKRVDIWAFGLVLWEV 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + ++V E M NGSL L + A T QL V + I+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYL 208
++ L +D +HRD+ + NIL +S K++DFGL+ V E D + G I +
Sbjct: 160 MKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 209 DPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+VL E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQD K N E++++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQDKRFK-NRELQIM 101
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 102 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPETVYRVARHYSRAKQTL 153
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 154 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
Query: 194 DESSMVQPAGTIGYLDP----GYTNPSKLSKKVDVFSYGVVLLEII 235
V + Y P G T+ + +DV+S G VL E++
Sbjct: 209 RGEPNVSXICSRYYRAPELIFGATD---YTSSIDVWSAGCVLAELL 251
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 40/244 (16%)
Query: 9 ELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKL 68
+L E + ++IG+G+ G V L H++ K+ A+K S FE+++ +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQ---LVRHKST--RKVYAMKLLSK--FEMIKRSDSAF 115
Query: 69 NNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN 128
E R + + N + V F+ + + +VME+MP G L +L+ N
Sbjct: 116 FWEERDIMAFA-----NSPWVVQLFY--------AFQDDRYLYMVMEYMPGGDLVNLMSN 162
Query: 129 AAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
+ V +A+ AI + IHRD+K N+L D KLADFG
Sbjct: 163 YDVPEKWARFYTAEVVLALD---AIHSMG-----FIHRDVKPDNMLLDKSGHLKLADFGT 214
Query: 189 AVSESDESSMVQPAGTIGYLDPGYTNPSKL---------SKKVDVFSYGVVLLEIISCRK 239
+ + E MV+ +G P Y +P L ++ D +S GV L E++
Sbjct: 215 CMKMNKE-GMVRCDTAVG--TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 271
Query: 240 PIDA 243
P A
Sbjct: 272 PFYA 275
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L L P V +A QI+ + + + +HRD+ +
Sbjct: 89 IVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLAAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 204 LLTELTT 210
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 40/244 (16%)
Query: 9 ELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKL 68
+L E + ++IG+G+ G V L H++ K+ A+K S FE+++ +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQ---LVRHKST--RKVYAMKLLSK--FEMIKRSDSAF 120
Query: 69 NNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN 128
E R + + N + V F+ + + +VME+MP G L +L+ N
Sbjct: 121 FWEERDIMAFA-----NSPWVVQLFY--------AFQDDRYLYMVMEYMPGGDLVNLMSN 167
Query: 129 AAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
+ V +A+ AI + IHRD+K N+L D KLADFG
Sbjct: 168 YDVPEKWARFYTAEVVLALD---AIHSMG-----FIHRDVKPDNMLLDKSGHLKLADFGT 219
Query: 189 AVSESDESSMVQPAGTIGYLDPGYTNPSKL---------SKKVDVFSYGVVLLEIISCRK 239
+ + E MV+ +G P Y +P L ++ D +S GV L E++
Sbjct: 220 CMKMNKE-GMVRCDTAVG--TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
Query: 240 PIDA 243
P A
Sbjct: 277 PFYA 280
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M GSL D L L P V +A QI+ + + + +HRD+++
Sbjct: 256 IVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 310
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGL + E +E + Q A I + P + + K DV+S+G+
Sbjct: 311 NILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 371 LLTELTT 377
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Query: 112 LVMEFMPNGSLYDLL--HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+V+E M G L+D + + T +L + Q+ A+Q LHEN IIHRD+K
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYF-------YQMLLAVQYLHENG--IIHRDLK 280
Query: 170 STNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGY---TNPSKLSKKVD 223
N+L S+ + K+ DFG + + S M GT YL P + ++ VD
Sbjct: 281 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 340
Query: 224 VFSYGVVLLEIISCRKPIDAARDPASIID 252
+S GV+L +S P R S+ D
Sbjct: 341 CWSLGVILFICLSGYPPFSEHRTQVSLKD 369
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV + MP+G L + +H QL + +QI++ + L E ++HRD+ +
Sbjct: 116 LVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMYLEERR--LVHRDLAAR 169
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG--TIGYLDPGYTNPSKLSKKVDVFSYG 228
N+L S K+ DFGLA + E DE G I ++ + K + + DV+SYG
Sbjct: 170 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 229
Query: 229 VVLLEIISC-RKPIDA 243
V + E+++ KP D
Sbjct: 230 VTIWELMTFGGKPYDG 245
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Query: 112 LVMEFMPNGSLYDLL--HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+V+E M G L+D + + T +L + Q+ A+Q LHEN IIHRD+K
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYF-------YQMLLAVQYLHENG--IIHRDLK 266
Query: 170 STNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGY---TNPSKLSKKVD 223
N+L S+ + K+ DFG + + S M GT YL P + ++ VD
Sbjct: 267 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 326
Query: 224 VFSYGVVLLEIISCRKPIDAARDPASIID 252
+S GV+L +S P R S+ D
Sbjct: 327 CWSLGVILFICLSGYPPFSEHRTQVSLKD 355
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 108 SNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRD 167
++ ++V+E+ G L+D + T + + QI AI+ H + I+HRD
Sbjct: 82 TDIVMVIEY-AGGELFDYIVEKKRMTEDE-----GRRFFQQIICAIEYCHRHK--IVHRD 133
Query: 168 IKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKL--SKKVDVF 225
+K N+L D + K+ADFGL+ +D + + G+ Y P N KL +VDV+
Sbjct: 134 LKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN-GKLYAGPEVDVW 192
Query: 226 SYGVVLLEIISCRKPID 242
S G+VL ++ R P D
Sbjct: 193 SCGIVLYVMLVGRLPFD 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E+M G L D L L P V +A QI+ + + + +HRD+++
Sbjct: 89 IVTEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAA 143
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG-TIGYLDPGYTNPSKLSKKVDVFSYGV 229
NIL K+ADFGLA + E +E + Q A I + P + + K DV+S+G+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 230 VLLEIIS 236
+L E+ +
Sbjct: 204 LLTELTT 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV + MP+G L + +H QL + +QI++ + L E ++HRD+ +
Sbjct: 93 LVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMYLEERR--LVHRDLAAR 146
Query: 172 NILFDSKWDAKLADFGLA-VSESDESSMVQPAG--TIGYLDPGYTNPSKLSKKVDVFSYG 228
N+L S K+ DFGLA + E DE G I ++ + K + + DV+SYG
Sbjct: 147 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 206
Query: 229 VVLLEIISC-RKPIDA 243
V + E+++ KP D
Sbjct: 207 VTIWELMTFGGKPYDG 222
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 45 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 95
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + LV M LY LL T
Sbjct: 96 LRFRHENIIGINDII---------RAPTIEQMKDVYLVTHLM-GADLYKLL------KTQ 139
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 140 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 197
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 198 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 32/254 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKA-ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
E+F +++G G++G V+ + H T + + +K+A+ ++Q K R
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKAT-----IVQ--KAKTTEHTR 106
Query: 74 VLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAAT 133
+ E +++P +++ + + L+++++ G L+ L T
Sbjct: 107 TERQVLEHIRQSPFLVTLHY---------AFQTETKLHLILDYINGGELFTHLSQRERFT 157
Query: 134 TPQLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--- 189
+ V+I + +I A++ LH+ II+RDIK NIL DS L DFGL+
Sbjct: 158 ------EHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEF 209
Query: 190 VSESDESSMVQPAGTIGYLDPGYT--NPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDP 247
V++ E + GTI Y+ P S K VD +S GV++ E+++ P +
Sbjct: 210 VADETERAY-DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK 268
Query: 248 ASIIDWALPLIKEE 261
S + + ++K E
Sbjct: 269 NSQAEISRRILKSE 282
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 26 GSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD--NSKKLNNEIRVLSSLQESNK 83
G+ GS + ++ G + + R G EV +S++ + R Q
Sbjct: 1 GAMGSTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML 60
Query: 84 RNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRV 143
R+ N ++ F +++G+ + LV ++ +GSL+D L N T + +
Sbjct: 61 RHEN--ILGFIAADNKDNGTW---TQLWLVSDYHEHGSLFDYL-NRYTVTVEGM-----I 109
Query: 144 KIAMQISRAIQCLH------ENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
K+A+ + + LH + P I HRD+KS NIL +AD GLAV +
Sbjct: 110 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 169
Query: 198 MVQPA-----GTIGYLDPGYTNPS------KLSKKVDVFSYGVVLLEI 234
+ A GT Y+ P + S + K+ D+++ G+V EI
Sbjct: 170 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNAAAATTPQLGWPNRVKIAMQISR 151
H G V ++V+EFM NG+L L H+ +G + M+
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMR--- 159
Query: 152 AIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGY 207
+ D +HRD+ + NIL +S K++DFGL+ V E D ++ G + +
Sbjct: 160 -----YLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW 214
Query: 208 LDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
P K + DV+SYG+V+ E++S
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 42/278 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E F L+GKGS VY+A E T + I I + + ++Q ++ NE+++
Sbjct: 11 EDFKVGNLLGKGSFAGVYRA--ESIHTGLEVAIKMIDKKAMYKAGMVQ----RVQNEVKI 64
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L+ H + + ++ LV+E NG + L N +
Sbjct: 65 HCQLK--------------HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFS 110
Query: 135 PQLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS-E 192
N + M QI + LH + I+HRD+ +N+L + K+ADFGLA +
Sbjct: 111 E-----NEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
GT Y+ P S + DV+S G + ++ R P D
Sbjct: 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD-------- 215
Query: 253 WALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAAR 290
+ L +V + +P+F+ K ++H R
Sbjct: 216 -----TVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLR 248
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 55/244 (22%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD--NSKKLNNEIRVLSSLQE 80
+GKG++G V+K+I D +T +++A+K+ F+ Q+ ++++ EI +L+ L
Sbjct: 17 LGKGAYGIVWKSI--DRRTG---EVVAVKKI----FDAFQNSTDAQRTFREIMILTEL-- 65
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
S N +VN N D + + LV ++M LH A L
Sbjct: 66 SGHEN----IVNL-----LNVLRADNDRDVYLVFDYMETD-----LHAVIRANI--LEPV 109
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS--------- 191
++ + Q+ + I+ LH ++HRD+K +NIL +++ K+ADFGL+ S
Sbjct: 110 HKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN 167
Query: 192 -------------ESDESSMVQPAGTIGYLDPG-YTNPSKLSKKVDVFSYGVVLLEIISC 237
+ D+ + T Y P +K +K +D++S G +L EI+ C
Sbjct: 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL-C 226
Query: 238 RKPI 241
KPI
Sbjct: 227 GKPI 230
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 27 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 77
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ + N N + + +++ + +V + M LY LL T
Sbjct: 78 LAFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 121
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 122 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 92 NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISR 151
N G + S + ++ L+ + +GSLYD L P L +++A+ +
Sbjct: 63 NILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLA----LRLAVSAAC 116
Query: 152 AIQCLH------ENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQ----- 200
+ LH + P I HRD KS N+L S +AD GLAV S S +
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 201 PAGTIGYLDPGY------TNPSKLSKKVDVFSYGVVLLEI 234
GT Y+ P T+ + K D++++G+VL EI
Sbjct: 177 RVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V + + S++ ++G G G V+K +T K LA K T G + + +++ N
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKC----EETATGLK-LAAKIIKTRGMK----DKEEVKN 135
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI V++ L +N ++ + + + ++ +LVME++ G L+D + + +
Sbjct: 136 EISVMNQLDHAN-------LIQLYD-------AFESKNDIVLVMEYVDGGELFDRIIDES 181
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNIL---FDSKWDAKLADFG 187
T + + QI I+ +H+ I+H D+K NIL D+K K+ DFG
Sbjct: 182 YNLTEL----DTILFMKQICEGIRHMHQ--MYILHLDLKPENILCVNRDAK-QIKIIDFG 234
Query: 188 LAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDP 247
LA + GT +L P N +S D++S GV+ ++S P D
Sbjct: 235 LARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA 294
Query: 248 ASI 250
++
Sbjct: 295 ETL 297
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLH------ENDPMIIH 165
LV ++ +GSL+D L N T + +K+A+ + + LH + P I H
Sbjct: 81 LVSDYHEHGSLFDYL-NRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAH 134
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA-----GTIGYLDPGYTNPS---- 216
RD+KS NIL +AD GLAV + + A GT Y+ P + S
Sbjct: 135 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 194
Query: 217 --KLSKKVDVFSYGVVLLEI 234
+ K+ D+++ G+V EI
Sbjct: 195 HFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLH------ENDPMIIH 165
LV ++ +GSL+D L N T + +K+A+ + + LH + P I H
Sbjct: 79 LVSDYHEHGSLFDYL-NRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAH 132
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA-----GTIGYLDPGYTNPS---- 216
RD+KS NIL +AD GLAV + + A GT Y+ P + S
Sbjct: 133 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 192
Query: 217 --KLSKKVDVFSYGVVLLEI 234
+ K+ D+++ G+V EI
Sbjct: 193 HFESFKRADIYAMGLVFWEI 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + +++ EFM NG+L L N T QL V + I+
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASG 130
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAGTIGYLDPG 211
++ L E +HRD+ + NIL +S K++DFGL+ E + S + + G +
Sbjct: 131 MRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR 188
Query: 212 YTNPS-----KLSKKVDVFSYGVVLLEIIS 236
+T P K + D +SYG+V+ E++S
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLH------ENDPMIIH 165
LV ++ +GSL+D L N T + +K+A+ + + LH + P I H
Sbjct: 78 LVSDYHEHGSLFDYL-NRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAH 131
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA-----GTIGYLDPGYTNPS---- 216
RD+KS NIL +AD GLAV + + A GT Y+ P + S
Sbjct: 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 191
Query: 217 --KLSKKVDVFSYGVVLLEI 234
+ K+ D+++ G+V EI
Sbjct: 192 HFESFKRADIYAMGLVFWEI 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 122/297 (41%), Gaps = 50/297 (16%)
Query: 18 SQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSS 77
++ ++IG G G VYK +L+ + G ++ + G+ + E ++
Sbjct: 47 TRQKVIGAGEFGEVYKGMLK--TSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQ 102
Query: 78 LQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-AAATTPQ 136
H R G + +++ E+M NG+L L + Q
Sbjct: 103 FS--------------HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ 148
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDE 195
L V + I+ ++ L + +HRD+ + NIL +S K++DFGL+ V E D
Sbjct: 149 L-----VGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201
Query: 196 SSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPIDAARDPASII 251
+ +G I + P + K + DV+S+G+V+ E+++ +P
Sbjct: 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY---------- 251
Query: 252 DWALPLIKEEKLRQVCDSRVGLPTFME--GAIKQMLHVAARCVSSEEENRPGIGEIL 306
W L E ++ + D LPT M+ AI Q++ +C E RP +I+
Sbjct: 252 -WELS--NHEVMKAINDG-FRLPTPMDCPSAIYQLM---MQCWQQERARRPKFADIV 301
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK-LNNEI 72
++ + R++GKGS G V IL + G A+K S +V Q K+ L E+
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQE--CAVKVISKR--QVKQKTDKESLLREV 83
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
++L L N ++ + + LV E G L+D +
Sbjct: 84 QLLKQLDHPN-------IMKLYEF-------FEDKGYFYLVGEVYTGGELFDEI-----I 124
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK---WDAKLADFGLA 189
+ + + +I Q+ I +H+N I+HRD+K N+L +SK + ++ DFGL+
Sbjct: 125 SRKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Query: 190 VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
M GT Y+ P + + +K DV+S GV+L ++S P + A +
Sbjct: 183 THFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANE 238
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 37/274 (13%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
S++ +++IG GS G VY+A L D +++AIK+ VLQ + K N E++++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD-----SGELVAIKK-------VLQGKAFK-NRELQIM 67
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
L N Y F +S V N LV++++P H + A T
Sbjct: 68 RKLDHCNIVRLRY----FFYSSGEKKDEVYLN----LVLDYVPATVYRVARHYSRAKQTL 119
Query: 136 QLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSES 193
+ + VK+ M Q+ R++ +H I HRDIK N+L D KL DFG A
Sbjct: 120 PVIY---VKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 194 DESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCRK--PIDAARDPASI 250
V + Y P + + +DV+S G VL E++ + P D+ D
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
Query: 251 IDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQM 284
I L E++R++ P + E A Q+
Sbjct: 235 IIKVLGTPTREQIREMN------PNYTEFAFPQI 262
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLH------ENDPMIIH 165
LV ++ +GSL+D L N T + +K+A+ + + LH + P I H
Sbjct: 104 LVSDYHEHGSLFDYL-NRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAH 157
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA-----GTIGYLDPGYTNPS---- 216
RD+KS NIL +AD GLAV + + A GT Y+ P + S
Sbjct: 158 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 217
Query: 217 --KLSKKVDVFSYGVVLLEI 234
+ K+ D+++ G+V EI
Sbjct: 218 HFESFKRADIYAMGLVFWEI 237
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 138/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 63
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 64 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 108
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 109 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 160
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FG A E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 161 FGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 221 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 263
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 264 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 294
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 75
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 76 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 119
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 120 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 27 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 77
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ + N N + + +++ + +V + M LY LL T
Sbjct: 78 LAFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 121
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 122 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPD 179
Query: 195 ESS---MVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
+ + T Y P N +K +D++S G +L E++S R
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 138/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 70
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 71 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 115
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 116 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 167
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FG A E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 168 FGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 228 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 270
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 271 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 301
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRA 152
H R G V + +++ EFM NG+L L N T QL V + I+
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASG 128
Query: 153 IQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDP-G 211
++ L E +HRD+ + NIL +S K++DFGL+ + SS ++G P
Sbjct: 129 MRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR 186
Query: 212 YTNPS-----KLSKKVDVFSYGVVLLEIIS 236
+T P K + D +SYG+V+ E++S
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 75
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 76 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 119
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 120 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 27 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 77
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 78 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 121
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 122 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 138/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++ G+ G+VYK I E + I ++ A++ +K+
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 70
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ C R G + S L+ + MP G L D +
Sbjct: 71 ILDEAYVMASVD-----NPHVC---------RLLG-ICLTSTVQLITQLMPFGCLLDYVR 115
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 116 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 167
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 168 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 228 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 270
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 271 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 301
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 45 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 95
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 96 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 139
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 140 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 197
Query: 195 ESS---MVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
+ + T Y P N +K +D++S G +L E++S R
Sbjct: 198 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLH------ENDPMIIH 165
LV ++ +GSL+D L N T + +K+A+ + + LH + P I H
Sbjct: 117 LVSDYHEHGSLFDYL-NRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 166 RDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA-----GTIGYLDPGYTNPS---- 216
RD+KS NIL +AD GLAV + + A GT Y+ P + S
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 230
Query: 217 --KLSKKVDVFSYGVVLLEI 234
+ K+ D+++ G+V EI
Sbjct: 231 HFESFKRADIYAMGLVFWEI 250
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 23 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 73
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 74 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 117
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 118 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 176 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 138/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++ G+ G+VYK I E + I ++ A++ +K+
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 63
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 64 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 108
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 109 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 160
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FGLA E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 221 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMVKCWMIDADSR 263
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 264 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 294
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 41/295 (13%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +G G+ G V +A + +A+K + D + L +E++++S L
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA---DEKEALMSELKIMSHLG 99
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ--- 136
+ +VN G +C + G V L++ E+ G L + L A A +
Sbjct: 100 QHEN------IVNLLG-ACTHGGPV------LVITEYCCYGDLLNFLRRKAEADLDKEDG 146
Query: 137 --LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
L + + + Q+++ + L + IHRD+ + N+L + AK+ DFGLA +
Sbjct: 147 RPLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 204
Query: 195 ESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII 251
+S+ + + ++ P + + DV+SYG++L EI S +P I
Sbjct: 205 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGI 258
Query: 252 DWALPLIKEEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEI 305
L+ + + V D ++ P F A K + + C + E +RP +I
Sbjct: 259 -----LVNSKFYKLVKDGYQMAQPAF---APKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 33/227 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F +G G+ V +L + + G K+ A+K + L+ + NEI VL
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATG--KLFAVKCIPK---KALKGKESSIENEIAVLR 75
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
++ N +V + ++ LVM+ + G L+D + T
Sbjct: 76 KIKHEN-------IVALEDI-------YESPNHLYLVMQLVSGGELFDRIVEKGFYTEK- 120
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF---DSKWDAKLADFGLAVSES 193
+ + Q+ A+ LH I+HRD+K N+L+ D + ++DFGL+ E
Sbjct: 121 ----DASTLIRQVLDAVYYLHRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG 174
Query: 194 DESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
M GT GY+ P SK VD +S GV+ I+ C P
Sbjct: 175 KGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 30 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 80
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 81 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 124
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 125 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 183 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 31 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 81
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 82 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 125
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 126 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 183
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 184 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 22 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 72
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 73 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 116
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 117 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 174
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 175 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 79
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 80 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 123
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 33 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 83
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 84 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 127
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 128 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 185
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 186 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 75
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 76 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 119
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 120 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 23 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 73
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 74 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 117
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 118 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 176 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 79
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 80 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 123
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 79
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 80 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 123
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 182 HDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 30 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 80
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 81 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 124
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 125 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 183 HDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYXQRTLREIKIL 79
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 80 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 123
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 75
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 76 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 119
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 120 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 41/295 (13%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +G G+ G V +A + +A+K + D + L +E++++S L
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA---DEKEALMSELKIMSHLG 107
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ--- 136
+ +VN G +C + G V L++ E+ G L + L A A +
Sbjct: 108 QHEN------IVNLLG-ACTHGGPV------LVITEYCCYGDLLNFLRRKAEADLDKEDG 154
Query: 137 --LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
L + + + Q+++ + L + IHRD+ + N+L + AK+ DFGLA +
Sbjct: 155 RPLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 212
Query: 195 ESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASII 251
+S+ + + ++ P + + DV+SYG++L EI S +P I
Sbjct: 213 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGI 266
Query: 252 DWALPLIKEEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEI 305
L+ + + V D ++ P F A K + + C + E +RP +I
Sbjct: 267 -----LVNSKFYKLVKDGYQMAQPAF---APKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY------DNVNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 75
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 76 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 119
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 120 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD 177
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 34/240 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS---KKLNNEIR 73
F ++IGKGS G K +L H+ + A+K VLQ + KK I
Sbjct: 40 FHFLKVIGKGSFG---KVLLARHK--AEEVFYAVK--------VLQKKAILKKKEEKHIM 86
Query: 74 VLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAAT 133
++ N ++P ++F S V++++ G L+ L
Sbjct: 87 SERNVLLKNVKHPFLVGLHF---------SFQTADKLYFVLDYINGGELFYHLQRERCFL 137
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
P+ + A +I+ A+ LH + I++RD+K NIL DS+ L DFGL
Sbjct: 138 EPRARF-----YAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENI 190
Query: 194 DESSMVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIID 252
+ +S GT YL P + + VD + G VL E++ P +R+ A + D
Sbjct: 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEMYD 249
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 112 LVMEFMPNGSL-YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+V EFM L ++++ A A + QI A++ H+N+ IIHRD+K
Sbjct: 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHY--MRQILEALRYCHDNN--IIHRDVKP 158
Query: 171 TNILFDSKWDA---KLADFGLAVSESDESSMVQPA--GTIGYLDPGYTNPSKLSKKVDVF 225
N+L SK ++ KL DFG+A+ + ES +V GT ++ P K VDV+
Sbjct: 159 ENVLLASKENSAPVKLGDFGVAI-QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
Query: 226 SYGVVLLEIISCRKPIDAARD 246
GV+L ++S P ++
Sbjct: 218 GCGVILFILLSGCLPFYGTKE 238
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV E G L+D + + + + +I Q+ I +H+N I+HRD+K
Sbjct: 127 LVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPE 179
Query: 172 NILFDSK---WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N+L +SK + ++ DFGL+ M GT Y+ P + + +K DV+S G
Sbjct: 180 NLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTG 238
Query: 229 VVLLEIISCRKPIDAARD 246
V+L ++S P + A +
Sbjct: 239 VILYILLSGCPPFNGANE 256
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV E G L+D + + + + +I Q+ I +H+N I+HRD+K
Sbjct: 126 LVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPE 178
Query: 172 NILFDSK---WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N+L +SK + ++ DFGL+ M GT Y+ P + + +K DV+S G
Sbjct: 179 NLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTG 237
Query: 229 VVLLEIISCRKPIDAARD 246
V+L ++S P + A +
Sbjct: 238 VILYILLSGCPPFNGANE 255
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 31/234 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLN-NE 71
++F R++GKGS G V A +++ GD + + + +LQD+ + E
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKE---TGDLYAVKVLKKDV----ILQDDDVECTMTE 73
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
R+LS + +C C + VMEF+ G L + H +
Sbjct: 74 KRILSLARNHPFLTQLFC--------CFQT-----PDRLFFVMEFVNGGDL--MFHIQKS 118
Query: 132 ATTPQLGWPNRVKI-AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
+ R + A +I A+ LH D II+RD+K N+L D + KLADFG+
Sbjct: 119 RRFDE----ARARFYAAEIISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
Query: 191 SE-SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDA 243
+ + GT Y+ P VD ++ GV+L E++ P +A
Sbjct: 173 EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 32/235 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ + + IG+G++G+V+KA ++ +T H+I+A+KR + D+ ++ +R
Sbjct: 2 QKYEKLEKIGEGTYGTVFKA--KNRET---HEIVALKRVRLD-----DDDEGVPSSALRE 51
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ L+E +N +V H + + LV EF + L +
Sbjct: 52 ICLLKELKHKN----IVRLHDV-------LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLD 99
Query: 135 PQLGWPNRVK-IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
P++ VK Q+ + + H + ++HRD+K N+L + + KLADFGLA +
Sbjct: 100 PEI-----VKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLADFGLARAFG 152
Query: 194 DESSMVQP-AGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAARD 246
T+ Y P +KL S +D++S G + E+ + +P+ D
Sbjct: 153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGND 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 102 GSVDGNSNKLLVMEFMPNGSLYDLL-HNAAAATTPQLGWPNRVKIAMQISRAIQCLHEND 160
G V ++ +++ EFM NGSL L N T QL V + I+ ++ L + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGMKYLADMN 129
Query: 161 PMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMVQPAGTIGYLDPGYTNPS--- 216
+HR + + NIL +S K++DFGL+ E D S + G + +T P
Sbjct: 130 --YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 217 --KLSKKVDVFSYGVVLLEIIS 236
K + DV+SYG+V+ E++S
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 138/331 (41%), Gaps = 57/331 (17%)
Query: 10 LVKATESFSQSRLIGKGSHGSVYKA--ILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
++K TE F + +++G G+ G+VYK I E + I ++ A++ +K+
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------PKANKE 65
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL- 126
+ +E V++S+ NP+ CR G + S L+ + MP G L D +
Sbjct: 66 ILDEAYVMASVD-----NPH---------VCRLLG-ICLTSTVQLITQLMPFGCLLDYVR 110
Query: 127 -HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
H + L W +QI++ + L D ++HRD+ + N+L + K+ D
Sbjct: 111 EHKDNIGSQYLLNW------CVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITD 162
Query: 186 FGLAVSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC-RKPI 241
FG A E G I ++ + + DV+SYGV + E+++ KP
Sbjct: 163 FGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 242 DAARDPASIIDWALPLIKEEKLRQ--VCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
D PAS I L K E+L Q +C V + + +C + ++R
Sbjct: 223 DGI--PASEISSILE--KGERLPQPPICTIDVYM-------------IMRKCWMIDADSR 265
Query: 300 PGIGEILMGCSCFFVDXXXXXXXXXVERVRL 330
P E+++ S D ER+ L
Sbjct: 266 PKFRELIIEFSKMARDPQRYLVIQGDERMHL 296
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 111 LLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+++ E+M NGSL L N T QL V + I ++ L +D +HRD+
Sbjct: 91 MIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL--SDMSYVHRDLA 143
Query: 170 STNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVF 225
+ NIL +S K++DFG++ V E D + G I + P K + DV+
Sbjct: 144 ARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 203
Query: 226 SYGVVLLEIIS 236
SYG+V+ E++S
Sbjct: 204 SYGIVMWEVMS 214
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G+G+ G V+ A + D ++A+K +D E +L++LQ
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD----FQREAELLTNLQH 76
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLL--HNAAA------ 131
+ +V F+G V G+ + L +V E+M +G L L H A
Sbjct: 77 EH-------IVKFYG--------VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 132 ---ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL 188
+LG + IA QI+ + L +HRD+ + N L + K+ DFG+
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 189 A--VSESDESSM-VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ V +D + I ++ P K + + DV+S+GV+L EI + K
Sbjct: 180 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 111 LLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+++ E+M NGSL L N T QL V + I ++ L +D +HRD+
Sbjct: 85 MIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL--SDMSYVHRDLA 137
Query: 170 STNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVF 225
+ NIL +S K++DFG++ V E D + G I + P K + DV+
Sbjct: 138 ARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 197
Query: 226 SYGVVLLEIIS 236
SYG+V+ E++S
Sbjct: 198 SYGIVMWEVMS 208
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 45/239 (18%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++GKG++G VY +Q +AIK E S+ L+ EI + L+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVR-----IAIKEIP----ERDSRYSQPLHEEIALHKHLKHK 65
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA---TTPQLG 138
N +V + G+ N G + + ME +P GSL LL + +G
Sbjct: 66 N-------IVQYLGSFSEN-GFIK------IFMEQVPGGSLSALLRSKWGPLKDNEQTIG 111
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSESDESS 197
+ + QI ++ LH+N I+HRDIK N+L ++ K++DFG S +
Sbjct: 112 FYTK-----QILEGLKYLHDN--QIVHRDIKGDNVLINTYSGVLKISDFGT----SKRLA 160
Query: 198 MVQP-----AGTIGYLDPGYTN--PSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPAS 249
+ P GT+ Y+ P + P K D++S G ++E+ + + P +P +
Sbjct: 161 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA 219
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV E G L+D + + + + +I Q+ I +H+N I+HRD+K
Sbjct: 103 LVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPE 155
Query: 172 NILFDSK---WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N+L +SK + ++ DFGL+ M GT Y+ P + + +K DV+S G
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTG 214
Query: 229 VVLLEIISCRKPIDAARD 246
V+L ++S P + A +
Sbjct: 215 VILYILLSGCPPFNGANE 232
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 126/300 (42%), Gaps = 47/300 (15%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
+ +G G+ G V +A + +A+K + D + L +E++++S L +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA---DEKEALMSELKIMSHLGQ 108
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNA 129
+VN G +C + G V L++ E+ G L + L +N
Sbjct: 109 HEN------IVNLLG-ACTHGGPV------LVITEYCCYGDLLNFLRRKRPPGLEYSYNP 155
Query: 130 AAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA 189
+ QL + + + Q+++ + L + IHRD+ + N+L + AK+ DFGLA
Sbjct: 156 SHNPEEQLSSRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 190 VSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
++S+ + + ++ P + + DV+SYG++L EI S +
Sbjct: 214 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLN 267
Query: 247 PASIIDWALPLIKEEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEI 305
P I L+ + + V D ++ P F A K + + C + E +RP +I
Sbjct: 268 PYPGI-----LVNSKFYKLVKDGYQMAQPAF---APKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 47/306 (15%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 24 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA---THSEHRALMSE 80
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 128
Query: 132 ATTPQ-------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLA 184
P L + + + Q+++ ++ L IHRD+ + NIL K K+
Sbjct: 129 EFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKIX 186
Query: 185 DFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
DFGLA + V+ + ++ P + + DV+S+GV+L EI S +
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----L 242
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEEENRP 300
A+ P ID EE R++ + +R+ P + +M C E RP
Sbjct: 243 GASPYPGVKID-------EEFXRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRP 292
Query: 301 GIGEIL 306
E++
Sbjct: 293 TFSELV 298
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 45/241 (18%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
++GKG++G VY +Q +AIK E S+ L+ EI + L+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVR-----IAIKEIP----ERDSRYSQPLHEEIALHKHLKHK 79
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA---TTPQLG 138
N +V + G+ N G + + ME +P GSL LL + +G
Sbjct: 80 N-------IVQYLGSFSEN-GFIK------IFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSESDESS 197
+ + QI ++ LH+N I+HRDIK N+L ++ K++DFG S +
Sbjct: 126 FYTK-----QILEGLKYLHDN--QIVHRDIKGDNVLINTYSGVLKISDFGT----SKRLA 174
Query: 198 MVQP-----AGTIGYLDPGYTN--PSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASI 250
+ P GT+ Y+ P + P K D++S G ++E+ + + P +P +
Sbjct: 175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 234
Query: 251 I 251
+
Sbjct: 235 M 235
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 50
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ + L D + +A
Sbjct: 51 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFL-HQDLKDFMDASAL 97
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
P P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 98 TGIP---LPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARA 152
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 125/317 (39%), Gaps = 51/317 (16%)
Query: 1 MAENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEV 60
++ N+D E+ + + +G G +G VY+ + + + +A+K + EV
Sbjct: 208 VSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDTMEV 260
Query: 61 LQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG 120
++ E V+ ++ N +V G R ++ EFM G
Sbjct: 261 -----EEFLKEAAVMKEIKHPN-------LVQLLGVCTREPPF-------YIITEFMTYG 301
Query: 121 SLYDLLH--NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
+L D L N + L + +A QIS A++ L + + IHR++ + N L
Sbjct: 302 NLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN--FIHRNLAARNCLVGEN 354
Query: 179 WDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
K+ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 355 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
Query: 237 CRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEE 296
P ID + EK D R+ P EG +++ + C
Sbjct: 415 Y------GMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNP 460
Query: 297 ENRPGIGEILMGCSCFF 313
+RP EI F
Sbjct: 461 SDRPSFAEIHQAFETMF 477
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AI++ S FE Q ++ EI++L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIRKISP--FEH-QTYCQRTLREIKIL 79
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL T
Sbjct: 80 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KTQ 123
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 111 LLVMEFMPNGSLYDLLH-NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+++ E+M NGSL L N T QL V + I ++ L +D +HRD+
Sbjct: 106 MIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL--SDMSAVHRDLA 158
Query: 170 STNILFDSKWDAKLADFGLA-VSESDESSMVQPAG---TIGYLDPGYTNPSKLSKKVDVF 225
+ NIL +S K++DFG++ V E D + G I + P K + DV+
Sbjct: 159 ARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 218
Query: 226 SYGVVLLEIIS 236
SYG+V+ E++S
Sbjct: 219 SYGIVMWEVMS 229
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++MEF+ G+L D++ +L + + +A+ LH +IHRDIKS
Sbjct: 119 VLMEFLQGGALTDIVSQV------RLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSD 170
Query: 172 NILFDSKWDAKLADFGLAVSES-DESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVV 230
+IL KL+DFG S D GT ++ P + S + +VD++S G++
Sbjct: 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 231 LLEIISCRKP 240
++E++ P
Sbjct: 231 VIEMVDGEPP 240
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 33/218 (15%)
Query: 51 KRASTNGFEV------LQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSV 104
+RA+ N F + + + + EI+ +S L R+P +VN H +
Sbjct: 72 ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHP--TLVNLHD-------AF 117
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
+ ++ +++ EFM G L++ A ++ V+ Q+ + + +HEN+ +
Sbjct: 118 EDDNEMVMIYEFMSGGELFE----KVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YV 171
Query: 165 HRDIKSTNILFDSKW--DAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
H D+K NI+F +K + KL DFGL + S+ GT + P +
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 231
Query: 223 DVFSYGVVLLEIISCRKPIDAARDPASI-----IDWAL 255
D++S GV+ ++S P D ++ DW +
Sbjct: 232 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 269
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
L+ +MP GSLY++LH Q VK A+ ++R + LH +P+I + S
Sbjct: 86 LITHWMPYGSLYNVLHEGTNFVVDQ---SQAVKFALDMARGMAFLHTLEPLIPRHALNSR 142
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK--------VD 223
+++ D A+++ + S M PA + P L KK D
Sbjct: 143 SVMIDEDMTARISMADVKFSFQSPGRMYAPA---------WVAPEALQKKPEDTNRRSAD 193
Query: 224 VFSYGVVLLEIISCRKPI 241
++S+ V+L E+++ P
Sbjct: 194 MWSFAVLLWELVTREVPF 211
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 51 KRASTNGFEVL------QDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSV 104
+RA+ N F + + + + EI+ +S L R+P +VN H +
Sbjct: 178 ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHP--TLVNLHD-------AF 223
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
+ ++ +++ EFM G L++ + A ++ V+ Q+ + + +HEN+ +
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YV 277
Query: 165 HRDIKSTNILFDSKW--DAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
H D+K NI+F +K + KL DFGL + S+ GT + P +
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 337
Query: 223 DVFSYGVVLLEIISCRKPIDAARDPASI-----IDWAL 255
D++S GV+ ++S P D ++ DW +
Sbjct: 338 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK-LNNEIRVLSSLQ 79
R +G+G+ G V+ A + + D ++A+K DN++K + E +L++LQ
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQ 73
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL--HNAAAATTPQL 137
+ +V F+G V+G+ ++V E+M +G L L H A +
Sbjct: 74 HEH-------IVKFYGVC------VEGDP-LIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 138 GWPNRV------KIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-- 189
P + IA QI+ + L +HRD+ + N L K+ DFG++
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSRD 177
Query: 190 VSESDESSM-VQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
V +D + I ++ P K + + DV+S GVVL EI + K
Sbjct: 178 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 57/304 (18%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
+ +G G+ G V +A + +A+K + D + L +E++++S L +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA---DEKEALMSELKIMSHLGQ 108
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH------------- 127
+VN G +C + G V L++ E+ G L + L
Sbjct: 109 HEN------IVNLLG-ACTHGGPV------LVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 128 --NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
N+ A+T L + ++V M + C IHRD+ + N+L + AK+ D
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNC--------IHRDVAARNVLLTNGHVAKIGD 207
Query: 186 FGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPID 242
FGLA ++S+ + + ++ P + + DV+SYG++L EI S
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL----- 262
Query: 243 AARDPASIIDWALPLIKEEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEENRPG 301
+P I L+ + + V D ++ P F A K + + C + E +RP
Sbjct: 263 -GLNPYPGI-----LVNSKFYKLVKDGYQMAQPAF---APKNIYSIMQACWALEPTHRPT 313
Query: 302 IGEI 305
+I
Sbjct: 314 FQQI 317
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 71/316 (22%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +G+G G V KA + + +A+K N + +L + + + L+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA------SPSELRDLLSEFNVLK 81
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA---------- 129
+ N +P+ V+ +G +C G + LL++E+ GSL L +
Sbjct: 82 QVN--HPH--VIKLYG-ACSQDGPL------LLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 130 -AAATTPQLGWPNR--------VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
+ + L P+ + A QIS+ +Q L E ++HRD+ + NIL
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGRK 188
Query: 181 AKLADFGLAVSESDESSMVQPA-GTI--------GYLDPGYTNPSKLSKKVDVFSYGVVL 231
K++DFGL+ +E S V+ + G I D YT S DV+S+GV+L
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS------DVWSFGVLL 242
Query: 232 LEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDS--RVGLPTFMEGAIKQMLHVAA 289
EI++ +P P I E+L + + R+ P + ++M +
Sbjct: 243 WEIVTL------GGNP-------YPGIPPERLFNLLKTGHRMERP---DNCSEEMYRLML 286
Query: 290 RCVSSEEENRPGIGEI 305
+C E + RP +I
Sbjct: 287 QCWKQEPDKRPVFADI 302
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 53
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ + L D + +A
Sbjct: 54 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFL-SMDLKDFMDASAL 100
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
P P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 101 TGIP---LPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 155
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 71/316 (22%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +G+G G V KA + + +A+K N + +L + + + L+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA------SPSELRDLLSEFNVLK 81
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA---------- 129
+ N +P+ V+ +G +C G + LL++E+ GSL L +
Sbjct: 82 QVN--HPH--VIKLYG-ACSQDGPL------LLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 130 -AAATTPQLGWPNR--------VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
+ + L P+ + A QIS+ +Q L E ++HRD+ + NIL
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRK 188
Query: 181 AKLADFGLAVSESDESSMVQPA-GTI--------GYLDPGYTNPSKLSKKVDVFSYGVVL 231
K++DFGL+ +E S V+ + G I D YT S DV+S+GV+L
Sbjct: 189 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS------DVWSFGVLL 242
Query: 232 LEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDS--RVGLPTFMEGAIKQMLHVAA 289
EI++ +P P I E+L + + R+ P + ++M +
Sbjct: 243 WEIVTL------GGNP-------YPGIPPERLFNLLKTGHRMERP---DNCSEEMYRLML 286
Query: 290 RCVSSEEENRPGIGEI 305
+C E + RP +I
Sbjct: 287 QCWKQEPDKRPVFADI 302
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 47/306 (15%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 24 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA---THSEHRALMSE 80
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 128
Query: 132 ATTPQ-------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLA 184
P L + + + Q+++ ++ L IHRD+ + NIL K K+
Sbjct: 129 EFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKIC 186
Query: 185 DFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
DFGLA + V+ + ++ P + + DV+S+GV+L EI S +
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----L 242
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEEENRP 300
A+ P ID EE R++ + +R+ P + +M C E RP
Sbjct: 243 GASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRP 292
Query: 301 GIGEIL 306
E++
Sbjct: 293 TFSELV 298
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 71/316 (22%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +G+G G V KA + + +A+K N + +L + + + L+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA------SPSELRDLLSEFNVLK 81
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA---------- 129
+ N +P+ V+ +G +C G + LL++E+ GSL L +
Sbjct: 82 QVN--HPH--VIKLYG-ACSQDGPL------LLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 130 -AAATTPQLGWPNR--------VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
+ + L P+ + A QIS+ +Q L E ++HRD+ + NIL
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRK 188
Query: 181 AKLADFGLAVSESDESSMVQPA-GTI--------GYLDPGYTNPSKLSKKVDVFSYGVVL 231
K++DFGL+ +E S V+ + G I D YT S DV+S+GV+L
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS------DVWSFGVLL 242
Query: 232 LEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDS--RVGLPTFMEGAIKQMLHVAA 289
EI++ +P P I E+L + + R+ P + ++M +
Sbjct: 243 WEIVTL------GGNP-------YPGIPPERLFNLLKTGHRMERP---DNCSEEMYRLML 286
Query: 290 RCVSSEEENRPGIGEI 305
+C E + RP +I
Sbjct: 287 QCWKQEPDKRPVFADI 302
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 45/298 (15%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
+ +G G+ G V +A + +A+K + D + L +E++++S L +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA---DEKEALMSELKIMSHLGQ 108
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHN---------AAA 131
+VN G +C + G V L++ E+ G L + L A A
Sbjct: 109 HEN------IVNLLG-ACTHGGPV------LVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
L + + + Q+++ + L + IHRD+ + N+L + AK+ DFGLA
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 192 ESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPA 248
++S+ + + ++ P + + DV+SYG++L EI S +P
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPY 267
Query: 249 SIIDWALPLIKEEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEI 305
I L+ + + V D ++ P F A K + + C + E +RP +I
Sbjct: 268 PGI-----LVNSKFYKLVKDGYQMAQPAF---APKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 52
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ + L D + +A
Sbjct: 53 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFL-SMDLKDFMDASAL 99
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
P P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 100 TGIP---LPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 154
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 124/317 (39%), Gaps = 51/317 (16%)
Query: 1 MAENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEV 60
++ N+D E+ + + +G G +G VY+ + + + +A+K + EV
Sbjct: 205 VSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDTMEV 257
Query: 61 LQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG 120
++ E V+ ++ N +V G R ++ EFM G
Sbjct: 258 -----EEFLKEAAVMKEIKHPN-------LVQLLGVCTREPPF-------YIITEFMTYG 298
Query: 121 SLYDLLH--NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
+L D L N L + +A QIS A++ L + + IHR++ + N L
Sbjct: 299 NLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN--FIHRNLAARNCLVGEN 351
Query: 179 WDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
K+ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 352 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
Query: 237 CRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEE 296
P ID + EK D R+ P EG +++ + C
Sbjct: 412 Y------GMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNP 457
Query: 297 ENRPGIGEILMGCSCFF 313
+RP EI F
Sbjct: 458 SDRPSFAEIHQAFETMF 474
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 122/308 (39%), Gaps = 49/308 (15%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA---THSEHRALMSE 82
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 83 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 130
Query: 132 ATTPQ---------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAK 182
P L + + + Q+++ ++ L IHRD+ + NIL K K
Sbjct: 131 EFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVK 188
Query: 183 LADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 189 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--- 245
Query: 240 PIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEEEN 298
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 246 -LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQ 294
Query: 299 RPGIGEIL 306
RP E++
Sbjct: 295 RPTFSELV 302
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 31/240 (12%)
Query: 4 NFDYEELVKAT----ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFE 59
F +EL K E + +G G++GSV A T H++ A+K+ S
Sbjct: 3 TFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQS 57
Query: 60 VLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPN 119
++ ++K+ E+R+L ++ N V+ + S++ ++ LV M
Sbjct: 58 II--HAKRTYRELRLLKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM-- 105
Query: 120 GSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW 179
G+ + + A T + + + QI R ++ +H D IIHRD+K +N+ +
Sbjct: 106 GADLNNIVKCAKLTDDHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDC 158
Query: 180 DAKLADFGLAVSESDESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
+ K+ DFGLA DE M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 159 ELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 43/242 (17%)
Query: 4 NFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD 63
NFD+ E+++A IGKGS G V I++ + T K+ A+K + V ++
Sbjct: 13 NFDHFEILRA---------IGKGSFGKV--CIVQKNDTK---KMYAMKYMNKQKC-VERN 57
Query: 64 NSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL- 122
+ + E++++ L+ N Y S + +V++ + G L
Sbjct: 58 EVRNVFKELQIMQGLEHPFLVNLWY--------------SFQDEEDMFMVVDLLLGGDLR 103
Query: 123 YDLLHNAAAATTPQLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
Y L N VK+ + ++ A+ L + IIHRD+K NIL D
Sbjct: 104 YHLQQNVHFKE-------ETVKLFICELVMALDYLQ--NQRIIHRDMKPDNILLDEHGHV 154
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSK---LSKKVDVFSYGVVLLEIISCR 238
+ DF +A E+ + AGT Y+ P + K S VD +S GV E++ R
Sbjct: 155 HITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
Query: 239 KP 240
+P
Sbjct: 215 RP 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
++ E+M NG L + L Q +++ + A++ L +HRD+ +
Sbjct: 95 FIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESKQ--FLHRDLAA 148
Query: 171 TNILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N L + + K++DFGL+ V + +E+S V + + P SK S K D++++G
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 229 VVLLEIISCRK 239
V++ EI S K
Sbjct: 209 VLMWEIYSLGK 219
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV+E + G L+D + + + VK QI A+ LHEN I+HRD+K
Sbjct: 125 LVLELVTGGELFDRIVEKGYYSERDAA--DAVK---QILEAVAYLHENG--IVHRDLKPE 177
Query: 172 NILFDSKW-DA--KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N+L+ + DA K+ADFGL+ + M GT GY P +VD++S G
Sbjct: 178 NLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVG 237
Query: 229 VVLLEIISCRKPI 241
++ ++ +P
Sbjct: 238 IITYILLCGFEPF 250
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 124/317 (39%), Gaps = 51/317 (16%)
Query: 1 MAENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEV 60
++ N+D E+ + + +G G +G VY+ + + + +A+K + EV
Sbjct: 247 VSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDTMEV 299
Query: 61 LQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG 120
++ E V+ ++ N +V G R ++ EFM G
Sbjct: 300 -----EEFLKEAAVMKEIKHPN-------LVQLLGVCTREPPF-------YIITEFMTYG 340
Query: 121 SLYDLLH--NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
+L D L N L + +A QIS A++ L + + IHR++ + N L
Sbjct: 341 NLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN--FIHRNLAARNCLVGEN 393
Query: 179 WDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
K+ADFGL+ + ++ I + P +K S K DV+++GV+L EI +
Sbjct: 394 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
Query: 237 CRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEE 296
P ID + EK D R+ P EG +++ + C
Sbjct: 454 Y------GMSPYPGIDLSQVYELLEK-----DYRMERP---EGCPEKVYELMRACWQWNP 499
Query: 297 ENRPGIGEILMGCSCFF 313
+RP EI F
Sbjct: 500 SDRPSFAEIHQAFETMF 516
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 35/213 (16%)
Query: 112 LVMEFMPNGSLYDLLH--NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+V E+MP G+L D L N T L + +A QIS A++ L + + IHRD+
Sbjct: 105 IVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSAMEYLEKKN--FIHRDLA 157
Query: 170 STNILFDSKWDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSY 227
+ N L K+ADFGL+ + ++ I + P + S K DV+++
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 228 GVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCD-----SRVGLPTFMEGAIK 282
GV+L EI + P ID L QV D R+ P EG
Sbjct: 218 GVLLWEIAT------YGMSPYPGID----------LSQVYDLLEKGYRMEQP---EGCPP 258
Query: 283 QMLHVAARCVSSEEENRPGIGEILMGCSCFFVD 315
++ + C +RP E F D
Sbjct: 259 KVYELMRACWKWSPADRPSFAETHQAFETMFHD 291
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
VME++ G DL+++ + P+ V A +I+ + L II+RD+K
Sbjct: 98 FVMEYVNGG---DLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLD 150
Query: 172 NILFDSKWDAKLADFGLAVSES-DESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVV 230
N++ DS+ K+ADFG+ D + GT Y+ P K VD +++GV+
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 231 LLEIISCRKPIDA 243
L E+++ + P +
Sbjct: 211 LYEMLAGQAPFEG 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
VME++ G DL+++ + P+ V A +I+ + L II+RD+K
Sbjct: 419 FVMEYVNGG---DLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLD 471
Query: 172 NILFDSKWDAKLADFGLAVSE-SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVV 230
N++ DS+ K+ADFG+ D + GT Y+ P K VD +++GV+
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 531
Query: 231 LLEIISCRKPIDA 243
L E+++ + P +
Sbjct: 532 LYEMLAGQAPFEG 544
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 48/242 (19%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ ++ IG+GS G V A+ K I+RA+ + ++ + EI +
Sbjct: 9 QYYTLENTIGRGSWGEVKIAV---------QKGTRIRRAAKKIPKYFVEDVDRFKQEIEI 59
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD-LLHNAAAAT 133
+ SL N ++ + T + N++ LVME G L++ ++H
Sbjct: 60 MKSLDHPN-------IIRLYET-------FEDNTDIYLVMELCTGGELFERVVHKRVFRE 105
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF-----DSKWDAKLADFGL 188
+ + +I + A+ H+ + + HRD+K N LF DS KL DFGL
Sbjct: 106 S------DAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSP--LKLIDFGL 155
Query: 189 AVSESDESSMVQPAGTIGYLDP----GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
A M GT Y+ P G P + D +S GV++ ++ P A
Sbjct: 156 AARFKPGKMMRTKVGTPYYVSPQVLEGLYGP-----ECDEWSAGVMMYVLLCGYPPFSAP 210
Query: 245 RD 246
D
Sbjct: 211 TD 212
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKI-LAIKRASTNGFEVLQDNSKKLNNEIRVL 75
++ IG+G++G V A D +K+ +AIK+ S FE Q ++ EI++L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISP--FEH-QTYCQRTLREIKIL 79
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTP 135
+ N N + + +++ + +V + M LY LL
Sbjct: 80 LRFRHENIIGINDII---------RAPTIEQMKDVYIVQDLM-ETDLYKLL------KCQ 123
Query: 136 QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESD 194
L + QI R ++ +H + ++HRD+K +N+L ++ D K+ DFGLA V++ D
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 195 ESS---MVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ + T Y P SK +K +D++S G +L E++S R
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 36/299 (12%)
Query: 8 EELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK 67
E+++ + F+ R++GKG GSV +A L+ Q DG +A+K + S
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLK--QEDGSFVKVAVKMLKADIIA-----SSD 68
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH 127
+ +R + ++E + +P+ V G S R S + ++++ FM +G L+ L
Sbjct: 69 IEEFLREAACMKEFD--HPH--VAKLVGVSLR-SRAKGRLPIPMVILPFMKHGDLHAFLL 123
Query: 128 NAAAATTP-QLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADF 186
+ P L V+ + I+ ++ L + IHRD+ + N + +ADF
Sbjct: 124 ASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADF 181
Query: 187 GLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIISCRKPI 241
GL S S G L + L+ + DV+++GV + EI++ +
Sbjct: 182 GL--SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
Query: 242 DAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRP 300
A + A I ++ LI +L+Q P ME ++ + +C S++ + RP
Sbjct: 240 YAGIENAEIYNY---LIGGNRLKQP-------PECME----EVYDLMYQCWSADPKQRP 284
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 48/242 (19%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ ++ IG+GS G V A+ K I+RA+ + ++ + EI +
Sbjct: 26 QYYTLENTIGRGSWGEVKIAV---------QKGTRIRRAAKKIPKYFVEDVDRFKQEIEI 76
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD-LLHNAAAAT 133
+ SL N ++ + T + N++ LVME G L++ ++H
Sbjct: 77 MKSLDHPN-------IIRLYET-------FEDNTDIYLVMELCTGGELFERVVHKRVFRE 122
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF-----DSKWDAKLADFGL 188
+ + +I + A+ H+ + + HRD+K N LF DS KL DFGL
Sbjct: 123 S------DAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSP--LKLIDFGL 172
Query: 189 AVSESDESSMVQPAGTIGYLDP----GYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAA 244
A M GT Y+ P G P + D +S GV++ ++ P A
Sbjct: 173 AARFKPGKMMRTKVGTPYYVSPQVLEGLYGP-----ECDEWSAGVMMYVLLCGYPPFSAP 227
Query: 245 RD 246
D
Sbjct: 228 TD 229
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 40/233 (17%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
FS R+IG+G G VY D K+ A+K ++ Q + LN R++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNE--RIML 243
Query: 77 SLQESNKRNPNYCV-VNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAATT 134
SL + C+ FH +KL +++ M G L+ L +
Sbjct: 244 SLVSTGDCPFIVCMSYAFH------------TPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + A +I ++ +H +++RD+K NIL D +++D GLA S
Sbjct: 292 ADMRF-----YAAEIILGLEHMHNR--FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKV------DVFSYGVVLLEIISCRKPI 241
+ +P ++G GY P L K V D FS G +L +++ P
Sbjct: 345 K----KPHASVG--THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 40/233 (17%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
FS R+IG+G G VY D K+ A+K ++ Q + LN R++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNE--RIML 243
Query: 77 SLQESNKRNPNYCV-VNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAATT 134
SL + C+ FH +KL +++ M G L+ L +
Sbjct: 244 SLVSTGDCPFIVCMSYAFH------------TPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + A +I ++ +H +++RD+K NIL D +++D GLA S
Sbjct: 292 ADMRF-----YAAEIILGLEHMHNR--FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKV------DVFSYGVVLLEIISCRKPI 241
+ +P ++G GY P L K V D FS G +L +++ P
Sbjct: 345 K----KPHASVG--THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 40/233 (17%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
FS R+IG+G G VY D K+ A+K ++ Q + LN R++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNE--RIML 243
Query: 77 SLQESNKRNPNYCV-VNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAATT 134
SL + C+ FH +KL +++ M G L+ L +
Sbjct: 244 SLVSTGDCPFIVCMSYAFH------------TPDKLSFILDLMNGGDLHYHLSQHGVFSE 291
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + A +I ++ +H +++RD+K NIL D +++D GLA S
Sbjct: 292 ADMRF-----YAAEIILGLEHMHNR--FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKV------DVFSYGVVLLEIISCRKPI 241
+ +P ++G GY P L K V D FS G +L +++ P
Sbjct: 345 K----KPHASVG--THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 40/233 (17%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
FS R+IG+G G VY D K+ A+K ++ Q + LN R++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNE--RIML 242
Query: 77 SLQESNKRNPNYCV-VNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAATT 134
SL + C+ FH +KL +++ M G L+ L +
Sbjct: 243 SLVSTGDCPFIVCMSYAFH------------TPDKLSFILDLMNGGDLHYHLSQHGVFSE 290
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + A +I ++ +H +++RD+K NIL D +++D GLA S
Sbjct: 291 ADMRF-----YAAEIILGLEHMHNR--FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 343
Query: 195 ESSMVQPAGTIGYLDPGYTNPSKLSKKV------DVFSYGVVLLEIISCRKPI 241
+ +P ++G GY P L K V D FS G +L +++ P
Sbjct: 344 K----KPHASVG--THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 35/244 (14%)
Query: 5 FDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDN 64
F +E + E + R +G+GS G VY+ D +A+K +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---------NE 57
Query: 65 SKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD 124
S L I L+ ++ V R G V L+VME M +G L
Sbjct: 58 SASLRERIEFLNEASVMKGFTCHHVV--------RLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 125 LLHNAAAATTPQLGWP-----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW 179
L + G P +++A +I+ + L N +HRD+ + N + +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL--NAKKFVHRDLAARNCMVAHDF 167
Query: 180 DAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLL 232
K+ DFG+ + E+D G G L + P L V D++S+GVVL
Sbjct: 168 TVKIGDFGMTRDIXETDXXR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 233 EIIS 236
EI S
Sbjct: 224 EITS 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 32/235 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ + + IG+G++G+V+KA ++ +T H+I+A+KR + D+ ++ +R
Sbjct: 2 QKYEKLEKIGEGTYGTVFKA--KNRET---HEIVALKRVRLD-----DDDEGVPSSALRE 51
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ L+E +N +V H + + LV EF + L +
Sbjct: 52 ICLLKELKHKN----IVRLHDV-------LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLD 99
Query: 135 PQLGWPNRVK-IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
P++ VK Q+ + + H + ++HRD+K N+L + + KLA+FGLA +
Sbjct: 100 PEI-----VKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFG 152
Query: 194 DESSMVQP-AGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAARD 246
T+ Y P +KL S +D++S G + E+ + +P+ D
Sbjct: 153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 45/229 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G+ G VYKA ++ +T + A K T E L+D EI +L++
Sbjct: 19 LGDGAFGKVYKA--KNKETGA---LAAAKVIETKSEEELEDYIV----EIEILATCD--- 66
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL-YDLLHNAAAATTPQLGWPN 141
H + G+ + +++EF P G++ +L T PQ+
Sbjct: 67 -----------HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ--- 112
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP 201
+ Q+ A+ LH IIHRD+K+ N+L + D +LADFG VS + ++ +
Sbjct: 113 --VVCRQMLEALNFLHSK--RIIHRDLKAGNVLMTLEGDIRLADFG--VSAKNLKTLQKR 166
Query: 202 AGTIGYLDPGYTNP----------SKLSKKVDVFSYGVVLLEIISCRKP 240
IG P + P + K D++S G+ L+E+ P
Sbjct: 167 DSFIG--TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 35/244 (14%)
Query: 5 FDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDN 64
F +E + E + R +G+GS G VY+ D +A+K +
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---------NE 54
Query: 65 SKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD 124
S L I L+ ++ V R G V L+VME M +G L
Sbjct: 55 SASLRERIEFLNEASVMKGFTCHHVV--------RLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 125 LLHNAAAATTPQLGWP-----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW 179
L + G P +++A +I+ + L N +HRD+ + N + +
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL--NAKKFVHRDLAARNCMVAHDF 164
Query: 180 DAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLL 232
K+ DFG+ + E+D G G L + P L V D++S+GVVL
Sbjct: 165 TVKIGDFGMTRDIXETDXXR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 220
Query: 233 EIIS 236
EI S
Sbjct: 221 EITS 224
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 52
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N +PN + V NKL LV EF+ DL A+
Sbjct: 53 ISLLKELN--HPNIVKLL----------DVIHTENKLYLVFEFLHQ----DLKKFMDASA 96
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 97 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 45/229 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G+ G VYKA ++ +T + A K T E L+D EI +L++
Sbjct: 27 LGDGAFGKVYKA--KNKETGA---LAAAKVIETKSEEELEDYIV----EIEILATCD--- 74
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL-YDLLHNAAAATTPQLGWPN 141
H + G+ + +++EF P G++ +L T PQ+
Sbjct: 75 -----------HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ--- 120
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP 201
+ Q+ A+ LH IIHRD+K+ N+L + D +LADFG VS + ++ +
Sbjct: 121 --VVCRQMLEALNFLHSK--RIIHRDLKAGNVLMTLEGDIRLADFG--VSAKNLKTLQKR 174
Query: 202 AGTIGYLDPGYTNP----------SKLSKKVDVFSYGVVLLEIISCRKP 240
IG P + P + K D++S G+ L+E+ P
Sbjct: 175 DSFIG--TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 52
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N N + H NKL LV EF+ DL A+
Sbjct: 53 ISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDASA 96
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 97 LTGIPLPLIKSYLFQLLQGLSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 35/234 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + R +G+GS G VY+ D +A+K + S L I
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---------NESASLRERIEF 67
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L+ ++ V R G V L+VME M +G L L +
Sbjct: 68 LNEASVMKGFTCHHVV--------RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 135 PQLGWP-----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA 189
G P +++A +I+ + L N +HRD+ + N + + K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYL--NAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 190 --VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ E+D G G L + P L V D++S+GVVL EI S
Sbjct: 178 RDIXETDXXR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 51
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 52 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 95
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 SALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 153
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 59
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N N + H NKL LV EF+ DL A+
Sbjct: 60 ISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDASA 103
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 104 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 161
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 162 VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 52
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N +PN + V NKL LV EF+ DL A+
Sbjct: 53 ISLLKELN--HPNIVKLL----------DVIHTENKLYLVFEFLHQ----DLKKFMDASA 96
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 97 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 122/309 (39%), Gaps = 50/309 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 25 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 81
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 82 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 129
Query: 132 ATTPQ----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 130 EFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVV 187
Query: 182 KLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCR 238
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-- 245
Query: 239 KPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEEE 297
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 246 --LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPS 293
Query: 298 NRPGIGEIL 306
RP E++
Sbjct: 294 QRPTFSELV 302
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 51
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N +PN + V NKL LV EF+ DL A+
Sbjct: 52 ISLLKELN--HPNIVKLL----------DVIHTENKLYLVFEFLHQ----DLKKFMDASA 95
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 51
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N +PN + V NKL LV EF+ DL A+
Sbjct: 52 ISLLKELN--HPNIVKLL----------DVIHTENKLYLVFEFLHQ----DLKKFMDASA 95
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 LTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 52
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N N + H NKL LV EF+ DL A+
Sbjct: 53 ISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDASA 96
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 97 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 59
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N N + H NKL LV EF+ DL A+
Sbjct: 60 ISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDASA 103
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 104 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 161
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 162 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 54
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 55 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 98
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 99 SALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 156
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 157 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 50
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 51 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 94
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA 152
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 51
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 52 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 95
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 SALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 153
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 51
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 52 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 95
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 SALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARA 153
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 56
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N N + H NKL LV EF+ DL A+
Sbjct: 57 ISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDASA 100
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 101 LTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 159 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 51
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N +PN + V NKL LV EF+ DL A+
Sbjct: 52 ISLLKELN--HPNIVKLL----------DVIHTENKLYLVFEFLHQ----DLKKFMDASA 95
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 54/308 (17%)
Query: 20 SRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQ 79
+ +G G+ G V +A + +A+K + D + L +E++++S L
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA---DEKEALMSELKIMSHLG 92
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT-PQL- 137
+ +VN G +C + G V L++ E+ G L + L A A P L
Sbjct: 93 QHEN------IVNLLG-ACTHGGPV------LVITEYCCYGDLLNFLRRKAEAMLGPSLA 139
Query: 138 ------------GWP----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
G P + + + Q+++ + L + IHRD+ + N+L + A
Sbjct: 140 PGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVA 197
Query: 182 KLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCR 238
K+ DFGLA ++S+ + + ++ P + + DV+SYG++L EI S
Sbjct: 198 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL- 256
Query: 239 KPIDAARDPASIIDWALPLIKEEKLRQVCDS-RVGLPTFMEGAIKQMLHVAARCVSSEEE 297
+P I L+ + + V D ++ P F A K + + C + E
Sbjct: 257 -----GLNPYPGI-----LVNSKFYKLVKDGYQMAQPAF---APKNIYSIMQACWALEPT 303
Query: 298 NRPGIGEI 305
+RP +I
Sbjct: 304 HRPTFQQI 311
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 122/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 71
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 72 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 119
Query: 132 ATTPQ-----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 177
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 236
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 237 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 283
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 284 SQRPTFSELV 293
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 122/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 80
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 128
Query: 132 ATTPQ-----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 186
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 245
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 246 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 292
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 293 SQRPTFSELV 302
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 122/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 80
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 128
Query: 132 ATTPQ-----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 186
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 245
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 246 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 292
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 293 SQRPTFSELV 302
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 52
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 53 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 96
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 97 SALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPENLLINTEGAIKLADFGLARA 154
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 52
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 53 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 96
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 97 SALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA 154
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 53
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 54 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 97
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 98 SALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA 155
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 53
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 54 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 97
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 98 SALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 155
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 52
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 53 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 96
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 97 SALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 154
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 50
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 51 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 94
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA 152
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 50
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 51 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 94
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 152
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 51
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N N + H NKL LV EF+ DL A+
Sbjct: 52 ISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDASA 95
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 LTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 122/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 82
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 83 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 130
Query: 132 ATTPQLGWP-----------NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P P + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 131 EFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 188
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 189 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 247
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 248 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 294
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 295 SQRPTFSELV 304
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 51
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 52 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLS----MDLKKFMDA 95
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 SALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARA 153
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 122/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 117
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 118 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 165
Query: 132 ATTPQ-----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 166 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 223
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 282
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 283 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 329
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 330 SQRPTFSELV 339
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQI 149
++ F + +GS + L+ ++ NGSLYD L + L K+A
Sbjct: 93 ILGFIAADIKGTGSW---TQLYLITDYHENGSLYDYLKSTTLDAKSML------KLAYSS 143
Query: 150 SRAIQCLH------ENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE-SDESSMVQP- 201
+ LH + P I HRD+KS NIL +AD GLAV SD + + P
Sbjct: 144 VSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP 203
Query: 202 ---AGTIGYLDPGYTNPSKLSKK-------VDVFSYGVVLLEI 234
GT Y+ P + S L++ D++S+G++L E+
Sbjct: 204 NTRVGTKRYMPPEVLDES-LNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV EFM +G L D L + + + + + + L E +IHRD+ +
Sbjct: 82 LVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEE--ACVIHRDLAAR 135
Query: 172 NILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGV 229
N L K++DFG+ V + +S + + P + S+ S K DV+S+GV
Sbjct: 136 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 195
Query: 230 VLLEIIS 236
++ E+ S
Sbjct: 196 LMWEVFS 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 50
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 51 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDA 94
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 95 SALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA 152
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 153 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 53
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ + L + +A
Sbjct: 54 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFL-HQDLKTFMDASAL 100
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
P P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 101 TGIP---LPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA 155
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 122/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 80
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + ++++EF G+L L +
Sbjct: 81 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVIVEFCKFGNLSTYLRSKRN 128
Query: 132 ATTPQ-----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 186
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 187 VKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 245
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 246 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 292
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 293 SQRPTFSELV 302
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 53
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N +PN + V NKL LV EF+ DL A+
Sbjct: 54 ISLLKELN--HPNIVKLL----------DVIHTENKLYLVFEFLHQ----DLKKFMDASA 97
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 98 LTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 53
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV EF+ DL A
Sbjct: 54 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLS----MDLKKFMDA 97
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 98 SALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARA 155
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD------NSKK 67
++ +S +G G+ G V+ A+ D + + + + IK+ +VL+D K
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAV--DKEKNKEVVVKFIKKE-----KVLEDCWIEDPKLGK 75
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH 127
+ EI +LS ++ +N V++ N G LVME +GS DL
Sbjct: 76 VTLEIAILSRVEHANIIK----VLDIF----ENQGFFQ------LVME--KHGSGLDLF- 118
Query: 128 NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFG 187
A P+L P I Q+ A+ L D IIHRDIK NI+ + KL DFG
Sbjct: 119 -AFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFG 175
Query: 188 LAVSESDESSMVQPAGTIGYLDPGYT--NPSKLSKKVDVFSYGVVLLEIISCRKP----- 240
A GTI Y P NP + +++++S GV L ++ P
Sbjct: 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYR-GPELEMWSLGVTLYTLVFEENPFCELE 234
Query: 241 --IDAARDPASIIDWALPLIKEEKLRQVCDSRVGL 273
++AA P ++ L + L+ V + R L
Sbjct: 235 ETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTL 269
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV EFM +G L D L + + + + + + L E +IHRD+ +
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEE--ACVIHRDLAAR 132
Query: 172 NILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGV 229
N L K++DFG+ V + +S + + P + S+ S K DV+S+GV
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 230 VLLEIIS 236
++ E+ S
Sbjct: 193 LMWEVFS 199
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 121/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 71
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + +++ EF G+L L +
Sbjct: 72 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVITEFCKFGNLSTYLRSKRN 119
Query: 132 ATTPQ-----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 177
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 236
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 237 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 283
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 284 SQRPTFSELV 293
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 95/229 (41%), Gaps = 45/229 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G+ G VYKA Q + A K T E L+D EI +L+S
Sbjct: 45 LGDGAFGKVYKA-----QNKETSVLAAAKVIDTKSEEELEDYMV----EIDILASCD--- 92
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD-LLHNAAAATTPQLGWPN 141
H + + +N +++EF G++ +L T Q+
Sbjct: 93 -----------HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ--- 138
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP 201
+ Q A+ LH+N IIHRD+K+ NILF D KLADFG VS + ++ +
Sbjct: 139 --VVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFG--VSAKNTRTIQRR 192
Query: 202 AGTIGYLDPGYTNPS----KLSK------KVDVFSYGVVLLEIISCRKP 240
IG P + P + SK K DV+S G+ L+E+ P
Sbjct: 193 DSFIG--TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV EFM +G L D L + + + + + + L E +IHRD+ +
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEEAS--VIHRDLAAR 132
Query: 172 NILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGV 229
N L K++DFG+ V + +S + + P + S+ S K DV+S+GV
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 192
Query: 230 VLLEIIS 236
++ E+ S
Sbjct: 193 LMWEVFS 199
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 35/244 (14%)
Query: 5 FDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDN 64
F +E + E + R +G+GS G VY+ D +A+K +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---------NE 57
Query: 65 SKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD 124
S L I L+ ++ V R G V L+VME M +G L
Sbjct: 58 SASLRERIEFLNEASVMKGFTCHHVV--------RLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 125 LLHNAAAATTPQLGWP-----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW 179
L + G P +++A +I+ + L N +HRD+ + N + +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL--NAKKFVHRDLAARNCMVAHDF 167
Query: 180 DAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLL 232
K+ DFG+ + E+D G G L + P L V D++S+GVVL
Sbjct: 168 TVKIGDFGMTRDIYETDYYR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 233 EIIS 236
EI S
Sbjct: 224 EITS 227
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV EFM +G L D L + + + + + + L E +IHRD+ +
Sbjct: 77 LVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEE--ACVIHRDLAAR 130
Query: 172 NILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGV 229
N L K++DFG+ V + +S + + P + S+ S K DV+S+GV
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 190
Query: 230 VLLEIIS 236
++ E+ S
Sbjct: 191 LMWEVFS 197
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 39/263 (14%)
Query: 14 TESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIR 73
+ + + +G+G +VYKA D T+ +I+AIK+ +D + +R
Sbjct: 9 AKRYEKLDFLGEGQFATVYKA--RDKNTN---QIVAIKKIKLGHRSEAKDGINR--TALR 61
Query: 74 VLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDG---NSNKLLVMEFMPNGSLYDLLHNAA 130
+ LQE + +PN G +D SN LV +FM + N+
Sbjct: 62 EIKLLQELS--HPNII------------GLLDAFGHKSNISLVFDFMETDLEVIIKDNSL 107
Query: 131 AATTPQLGWPNRVKIAMQIS-RAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA 189
T P+ +K M ++ + ++ LH++ I+HRD+K N+L D KLADFGLA
Sbjct: 108 VLT------PSHIKAYMLMTLQGLEYLHQH--WILHRDLKPNNLLLDENGVLKLADFGLA 159
Query: 190 VS-ESDESSMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPI---DAA 244
S S + T Y P +++ VD+++ G +L E++ R P D+
Sbjct: 160 KSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL-LRVPFLPGDSD 218
Query: 245 RDPASIIDWALPLIKEEKLRQVC 267
D + I L EE+ +C
Sbjct: 219 LDQLTRIFETLGTPTEEQWPDMC 241
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P SK D+++ G ++ ++++ P A +
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
++ E+M NG L + L Q +++ + A++ L +HRD+ +
Sbjct: 79 FIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESKQ--FLHRDLAA 132
Query: 171 TNILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N L + + K++DFGL+ V + + +S V + + P SK S K D++++G
Sbjct: 133 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 192
Query: 229 VVLLEIISCRK 239
V++ EI S K
Sbjct: 193 VLMWEIYSLGK 203
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA +DE M T Y
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVATRWY 195
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA +DE M T Y
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVATRWY 195
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA +DE M T Y
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVATRWY 195
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 53/256 (20%)
Query: 7 YEELVKAT----ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKIL----AIKRASTNGF 58
+ +LVK E F ++IG+G+ G V +++ + KIL +KRA T F
Sbjct: 62 FTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACF 121
Query: 59 EVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFM 117
++ +N + + +++L + + + N L LVM++
Sbjct: 122 R--EERDVLVNGDCQWITALHYAFQ-----------------------DENHLYLVMDYY 156
Query: 118 PNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS 177
G L LL + R I ++ AI +H+ +HRDIK N+L D
Sbjct: 157 VGGDLLTLLSKFEDKLPEDMA---RFYIG-EMVLAIDSIHQ--LHYVHRDIKPDNVLLDV 210
Query: 178 KWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNP----------SKLSKKVDVFSY 227
+LADFG + +D+ + VQ + +G P Y +P K + D +S
Sbjct: 211 NGHIRLADFGSCLKMNDDGT-VQSSVAVG--TPDYISPEILQAMEDGMGKYGPECDWWSL 267
Query: 228 GVVLLEIISCRKPIDA 243
GV + E++ P A
Sbjct: 268 GVCMYEMLYGETPFYA 283
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
++ E+M NG L + L Q +++ + A++ L +HRD+ +
Sbjct: 86 FIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESKQ--FLHRDLAA 139
Query: 171 TNILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N L + + K++DFGL+ V + + +S V + + P SK S K D++++G
Sbjct: 140 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 199
Query: 229 VVLLEIISCRK 239
V++ EI S K
Sbjct: 200 VLMWEIYSLGK 210
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 121/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 71
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + +++ EF G+L L +
Sbjct: 72 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVITEFCKFGNLSTYLRSKRN 119
Query: 132 ATTPQ-----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 177
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 236
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 237 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 283
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 284 SQRPTFSELV 293
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 35/234 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + R +G+GS G VY+ D +A+K + S L I
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---------NESASLRERIEF 66
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L+ ++ V R G V L+VME M +G L L +
Sbjct: 67 LNEASVMKGFTCHHVV--------RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 118
Query: 135 PQLGWP-----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA 189
G P +++A +I+ + L N +HRD+ + N + + K+ DFG+
Sbjct: 119 NNPGRPPPTLQEMIQMAAEIADGMAYL--NAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 176
Query: 190 --VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ E+D G G L + P L V D++S+GVVL EI S
Sbjct: 177 RDIYETDYYR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
++ E+M NG L + L Q +++ + A++ L +HRD+ +
Sbjct: 80 FIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESKQ--FLHRDLAA 133
Query: 171 TNILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N L + + K++DFGL+ V + + +S V + + P SK S K D++++G
Sbjct: 134 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 229 VVLLEIISCRK 239
V++ EI S K
Sbjct: 194 VLMWEIYSLGK 204
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV EFM +G L D L + + + + + + L E +IHRD+ +
Sbjct: 80 LVTEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEE--ACVIHRDLAAR 133
Query: 172 NILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGV 229
N L K++DFG+ V + +S + + P + S+ S K DV+S+GV
Sbjct: 134 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 193
Query: 230 VLLEIIS 236
++ E+ S
Sbjct: 194 LMWEVFS 200
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV EFM +G L D L + + + + + + L E +IHRD+ +
Sbjct: 99 LVFEFMEHGCLSDYLRTQRGLFAAE----TLLGMCLDVCEGMAYLEE--ACVIHRDLAAR 152
Query: 172 NILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGV 229
N L K++DFG+ V + +S + + P + S+ S K DV+S+GV
Sbjct: 153 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 212
Query: 230 VLLEIIS 236
++ E+ S
Sbjct: 213 LMWEVFS 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 70
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 71 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 120
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 121 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 174 E--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
++ E+M NG L + L Q +++ + A++ L +HRD+ +
Sbjct: 75 FIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESKQ--FLHRDLAA 128
Query: 171 TNILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N L + + K++DFGL+ V + + +S V + + P SK S K D++++G
Sbjct: 129 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 188
Query: 229 VVLLEIISCRK 239
V++ EI S K
Sbjct: 189 VLMWEIYSLGK 199
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
++ E+M NG L + L Q +++ + A++ L +HRD+ +
Sbjct: 95 FIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESKQ--FLHRDLAA 148
Query: 171 TNILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N L + + K++DFGL+ V + + +S V + + P SK S K D++++G
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 229 VVLLEIISCRK 239
V++ EI S K
Sbjct: 209 VLMWEIYSLGK 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP--- 201
+ Q A+ LH+N IIHRD+K+ NILF D KLADFG VS + + +Q
Sbjct: 113 VCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFG--VSAKNTRTXIQRRDS 168
Query: 202 -AGTIGYLDPGY-----TNPSKLSKKVDVFSYGVVLLEIISCRKP 240
GT ++ P + K DV+S G+ L+E+ P
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 95 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 144
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 145 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 198 E--MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 74
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 75 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 125 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 178 E--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP-AGTIG 206
+IS A+ LH+ II+RD+K NI+ + + KL DFGL + ++ GTI
Sbjct: 129 EISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 207 YLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASI 250
Y+ P S ++ VD +S G ++ ++++ P +I
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 121/310 (39%), Gaps = 51/310 (16%)
Query: 17 FSQSRL-----IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
F + RL +G+G+ G V +A + +A+K + L +E
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSE 71
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+++L + + VVN G + G + +++ EF G+L L +
Sbjct: 72 LKILIHIGH------HLNVVNLLGACTKPGGPL------MVITEFCKFGNLSTYLRSKRN 119
Query: 132 ATTPQ-----------LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
P L + + + Q+++ ++ L IHRD+ + NIL K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNV 177
Query: 181 AKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISC 237
K+ DFGLA + V+ + ++ P + + DV+S+GV+L EI S
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS- 236
Query: 238 RKPIDAARDPASIIDWALPLIKEEKLRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEE 296
+ A+ P ID EE R++ + +R+ P + +M C E
Sbjct: 237 ---LGASPYPGVKID-------EEFCRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEP 283
Query: 297 ENRPGIGEIL 306
RP E++
Sbjct: 284 SQRPTFSELV 293
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 95/242 (39%), Gaps = 31/242 (12%)
Query: 5 FDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDN 64
F +E + E + R +G+GS G VY+ D +A+K +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---------NE 57
Query: 65 SKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD 124
S L I L+ ++ V R G V L+VME M +G L
Sbjct: 58 SASLRERIEFLNEASVMKGFTCHHVV--------RLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 125 LLHNAAAATTPQLGWP-----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW 179
L + G P +++A +I+ + L N +HRD+ + N + +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL--NAKKFVHRDLAARNCMVAHDF 167
Query: 180 DAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEI 234
K+ DFG+ + E++ + G G L + P L V D++S+GVVL EI
Sbjct: 168 TVKIGDFGMT-RDIYETAYYRKGGK-GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 235 IS 236
S
Sbjct: 226 TS 227
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 94
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 95 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 144
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 145 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 198 E--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 84
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 85 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 134
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 135 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 187
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 188 E--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LV E G L+D + + + + +I Q+ I H+N I+HRD+K
Sbjct: 103 LVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYXHKN--KIVHRDLKPE 155
Query: 172 NILFDSK---WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N+L +SK + ++ DFGL+ GT Y+ P + + +K DV+S G
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTG 214
Query: 229 VVLLEIISCRKPIDAARD 246
V+L ++S P + A +
Sbjct: 215 VILYILLSGCPPFNGANE 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 144 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--MTGYVATRWY 199
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGXVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 53/256 (20%)
Query: 7 YEELVKAT----ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKIL----AIKRASTNGF 58
+ +LVK E F ++IG+G+ G V +++ + KIL +KRA T F
Sbjct: 78 FTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACF 137
Query: 59 EVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFM 117
++ +N + + +++L + + + N L LVM++
Sbjct: 138 R--EERDVLVNGDCQWITALHYAFQ-----------------------DENHLYLVMDYY 172
Query: 118 PNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS 177
G L LL + R I ++ AI +H+ +HRDIK N+L D
Sbjct: 173 VGGDLLTLLSKFEDKLPEDMA---RFYIG-EMVLAIDSIHQ--LHYVHRDIKPDNVLLDV 226
Query: 178 KWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNP----------SKLSKKVDVFSY 227
+LADFG + +D+ + VQ + +G P Y +P K + D +S
Sbjct: 227 NGHIRLADFGSCLKMNDDGT-VQSSVAVG--TPDYISPEILQAMEDGMGKYGPECDWWSL 283
Query: 228 GVVLLEIISCRKPIDA 243
GV + E++ P A
Sbjct: 284 GVCMYEMLYGETPFYA 299
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP-AGTIG 206
+IS A+ LH+ II+RD+K NI+ + + KL DFGL + ++ GTI
Sbjct: 129 EISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 207 YLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASI 250
Y+ P S ++ VD +S G ++ ++++ P +I
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI 230
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 45/187 (24%)
Query: 71 EIRVLSSLQESNKRNPNYCVV-----NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDL 125
EI VL ++E +K N CV+ NFHG C + E + + ++
Sbjct: 75 EINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC-------------IAFELLGKNT-FEF 120
Query: 126 LHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF-DSKWDA--- 181
L P P+ +A Q+ A++ LHEN + H D+K NILF +S+++
Sbjct: 121 LKENNFQPYP---LPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYN 175
Query: 182 ---------------KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFS 226
++ADFG A + + + + T Y P ++ DV+S
Sbjct: 176 EHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI--VATRHYRPPEVILELGWAQPCDVWS 233
Query: 227 YGVVLLE 233
G +L E
Sbjct: 234 IGCILFE 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 49/189 (25%)
Query: 71 EIRVLSSLQESNKRNPNYCVV-----NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL--Y 123
EI VL ++E +K N CV+ NFHG C + N+ EF+ + Y
Sbjct: 66 EINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNT-----FEFLKENNFQPY 120
Query: 124 DLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF-DSKWDA- 181
L P+ +A Q+ A++ LHEN + H D+K NILF +S+++
Sbjct: 121 PL--------------PHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETL 164
Query: 182 -----------------KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDV 224
++ADFG A + + + + T Y P ++ DV
Sbjct: 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI--VATRHYRPPEVILELGWAQPCDV 222
Query: 225 FSYGVVLLE 233
+S G +L E
Sbjct: 223 WSIGCILFE 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 93
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 94 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 143
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 144 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 197 E--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 138 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--MTGYVATRWY 193
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 138 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--MTGYVATRWY 193
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ L R T + + IR
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALXKIRLDT-------ETEGVPSTAIRE 52
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N N + H NKL LV EF+ DL A+
Sbjct: 53 ISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDASA 96
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 97 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ L R T + + IR
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALXKIRLDT-------ETEGVPSTAIRE 51
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAAAT 133
+S L+E N N + H NKL LV EF+ DL A+
Sbjct: 52 ISLLKELNHPNIVKLLDVIH------------TENKLYLVFEFLHQ----DLKKFMDASA 95
Query: 134 TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES 193
+ P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 96 LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
Query: 194 -DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 80
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 81 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 130
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 131 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 184 E--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 156 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 211
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 70
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 71 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 120
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 121 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 174 E--MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 153 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 208
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 139 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 194
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R+I + G K IL + D+K A+K+ + E +D +K N++I + S +
Sbjct: 34 RIIRTLNQGKFNKIIL----CEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSL-------YDLLHNAAAA 132
+N + + C + N +++ ++ E+M N S+ + L N
Sbjct: 90 F--KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 133 TTPQLGWPNRVK-IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
Q+ +K I + + +H N+ I HRD+K +NIL D KL+DFG +
Sbjct: 148 IPIQV-----IKCIIKSVLNSFSYIH-NEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 192 ESDESSMVQPAGTIGYLDPG-YTNPSKLS-KKVDVFSYGVVL 231
D+ + GT ++ P ++N S + KVD++S G+ L
Sbjct: 202 MVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G+ G VYKA Q + A K T E L+D EI +L+S
Sbjct: 45 LGDGAFGKVYKA-----QNKETSVLAAAKVIDTKSEEELEDYMV----EIDILASCD--- 92
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD-LLHNAAAATTPQLGWPN 141
H + + +N +++EF G++ +L T Q+
Sbjct: 93 -----------HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ--- 138
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP 201
+ Q A+ LH+N IIHRD+K+ NILF D KLADFG VS + + +
Sbjct: 139 --VVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFG--VSAKNTRXIQRR 192
Query: 202 AGTIGYLDPGYTNPS----KLSK------KVDVFSYGVVLLEIISCRKP 240
IG P + P + SK K DV+S G+ L+E+ P
Sbjct: 193 DSFIG--TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 74
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 75 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 125 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 178 E--MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 152 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 207
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 139 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 194
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 144 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 199
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 138 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 193
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 135 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 190
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 132 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 187
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 145 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 200
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT 204
+ QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T
Sbjct: 127 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVAT 182
Query: 205 IGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
Y P N ++ VD++S G ++ E+++ R
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 145 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 200
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 74
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 75 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA D
Sbjct: 125 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 178 E--MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 145 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 200
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 135 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 190
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 45/187 (24%)
Query: 71 EIRVLSSLQESNKRNPNYCVV-----NFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDL 125
EI VL ++E +K N CV+ NFHG C + E + + ++
Sbjct: 98 EINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC-------------IAFELLGKNT-FEF 143
Query: 126 LHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF-DSKWDA--- 181
L P P+ +A Q+ A++ LHEN + H D+K NILF +S+++
Sbjct: 144 LKENNFQPYP---LPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYN 198
Query: 182 ---------------KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFS 226
++ADFG A + + + + T Y P ++ DV+S
Sbjct: 199 EHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI--VATRHYRPPEVILELGWAQPCDVWS 256
Query: 227 YGVVLLE 233
G +L E
Sbjct: 257 IGCILFE 263
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 131 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 186
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT 204
+ QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T
Sbjct: 126 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVAT 181
Query: 205 IGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
Y P N ++ VD++S G ++ E+++ R
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 195
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 138 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 193
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 130 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 185
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 139 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--MTGYVATRWY 194
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 135 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 190
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+++ +M +G L + + T + + + +Q++R ++ L E +HRD+ +
Sbjct: 100 VLLPYMCHGDLLQFIRSPQRNPTVK----DLISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYT-----NPSKLSKKVDVFS 226
N + D + K+ADFGLA D L +T + + K DV+S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 227 YGVVLLEIISCRKPIDAARDPASI 250
+GV+L E+++ P DP +
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDL 237
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 39/221 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+G+ G V+ L D+ ++A+K + D K E R+L N
Sbjct: 122 IGRGNFGEVFSGRLR-----ADNTLVAVKSCRET---LPPDLKAKFLQEARILKQYSHPN 173
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V G C + +VME + G L A R
Sbjct: 174 -------IVRLIGV-CTQKQPI------YIVMELVQGGDFLTFLRTEGARL--------R 211
Query: 143 VKIAMQI--SRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQ 200
VK +Q+ A + IHRD+ + N L K K++DFG++ E+D +
Sbjct: 212 VKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD--GVYA 269
Query: 201 PAGTIGYLDPGYTNPSKL-----SKKVDVFSYGVVLLEIIS 236
+G + + +T P L S + DV+S+G++L E S
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 26/199 (13%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E++ NG L + L + P +++ + + L + IHRD+ +
Sbjct: 80 IVTEYISNGCLLNYLRSHGKGLEPS----QLLEMCYDVCEGMAFLESHQ--FIHRDLAAR 133
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYG 228
N L D K++DFG+ D+ V GT + + P + K S K DV+++G
Sbjct: 134 NCLVDRDLCVKVSDFGMTRYVLDD-QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192
Query: 229 VVLLEIISCRK-PIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHV 287
+++ E+ S K P D + ++ K+ Q R+ P I Q+++
Sbjct: 193 ILMWEVFSLGKMPYDLYTNSEVVL----------KVSQ--GHRLYRPHLASDTIYQIMY- 239
Query: 288 AARCVSSEEENRPGIGEIL 306
C E RP ++L
Sbjct: 240 --SCWHELPEKRPTFQQLL 256
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 135 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--MTGYVATRWY 190
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 39/221 (17%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG+G+ G V+ L D+ ++A+K + D K E R+L N
Sbjct: 122 IGRGNFGEVFSGRLR-----ADNTLVAVKSCRET---LPPDLKAKFLQEARILKQYSHPN 173
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
+V G C + +VME + G L A R
Sbjct: 174 -------IVRLIGV-CTQKQPI------YIVMELVQGGDFLTFLRTEGARL--------R 211
Query: 143 VKIAMQI--SRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQ 200
VK +Q+ A + IHRD+ + N L K K++DFG++ E+D +
Sbjct: 212 VKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD--GVXA 269
Query: 201 PAGTIGYLDPGYTNPSKL-----SKKVDVFSYGVVLLEIIS 236
+G + + +T P L S + DV+S+G++L E S
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 88/227 (38%), Gaps = 42/227 (18%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+SF + +G GS+G V+K ++ D ++ A+KR S + F +D ++KL
Sbjct: 57 QSFQRLSRLGHGSYGEVFKV-----RSKEDGRLYAVKR-SMSPFRGPKDRARKL------ 104
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ + K + C V +L ++ G A A+
Sbjct: 105 -AEVGSHEKVGQHPCCVRLEQAW---------EEGGILYLQTELCGPSLQQHCEAWGASL 154
Query: 135 PQL---GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
P+ G+ +A+ H + ++H D+K NI + KL DFGL V
Sbjct: 155 PEAQVWGYLRDTLLALA--------HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206
Query: 192 ESDESSMVQPAGTIGYLDPGYTNPSKL----SKKVDVFSYGVVLLEI 234
AG + DP Y P L DVFS G+ +LE+
Sbjct: 207 LGTAG-----AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G+ G VYKA Q + A K T E L+D EI +L+S
Sbjct: 45 LGDGAFGKVYKA-----QNKETSVLAAAKVIDTKSEEELEDYMV----EIDILASCD--- 92
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYD-LLHNAAAATTPQLGWPN 141
H + + +N +++EF G++ +L T Q+
Sbjct: 93 -----------HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ--- 138
Query: 142 RVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP 201
+ Q A+ LH+N IIHRD+K+ NILF D KLADFG VS + + +
Sbjct: 139 --VVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFG--VSAKNTRXIQRR 192
Query: 202 AGTIGYLDPGYTNPS----KLSK------KVDVFSYGVVLLEIISCRKP 240
IG P + P + SK K DV+S G+ L+E+ P
Sbjct: 193 DXFIG--TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 47/243 (19%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKIL----AIKRASTNGFEVLQDNSKKLNN 70
E F ++IG+G+ G V L++ KIL +KRA T F ++ +N
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFR--EERDVLVNG 131
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
+ + +++L + ++N LVM++ G L LL
Sbjct: 132 DSKWITTLHYA----------------------FQDDNNLYLVMDYYVGGDLLTLLSKFE 169
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
++ R +A ++ AI +H+ +HRDIK NIL D +LADFG +
Sbjct: 170 DRLPEEMA---RFYLA-EMVIAIDSVHQ--LHYVHRDIKPDNILMDMNGHIRLADFGSCL 223
Query: 191 SESDESSMVQPAGTIGYLDPGYTNP----------SKLSKKVDVFSYGVVLLEIISCRKP 240
++ + VQ + +G P Y +P + + D +S GV + E++ P
Sbjct: 224 KLMEDGT-VQSSVAVG--TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
Query: 241 IDA 243
A
Sbjct: 281 FYA 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAM---QISRAIQCLHENDPMIIHRDI 168
LVM+ + GS+ D++ + A + G + IA ++ ++ LH+N IHRD+
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDV 142
Query: 169 KSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYL-DPGYTNPSKLSK------K 221
K+ NIL ++ADFG++ + + + ++ P + P + + K
Sbjct: 143 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 202
Query: 222 VDVFSYGVVLLEIISCRKP 240
D++S+G+ +E+ + P
Sbjct: 203 ADIWSFGITAIELATGAAP 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T Y
Sbjct: 156 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MXGYVATRWY 211
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAM---QISRAIQCLHENDPMIIHRDI 168
LVM+ + GS+ D++ + A + G + IA ++ ++ LH+N IHRD+
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDV 147
Query: 169 KSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYL-DPGYTNPSKLSK------K 221
K+ NIL ++ADFG++ + + + ++ P + P + + K
Sbjct: 148 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 207
Query: 222 VDVFSYGVVLLEIISCRKP 240
D++S+G+ +E+ + P
Sbjct: 208 ADIWSFGITAIELATGAAP 226
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK--WDAKLADFGLA-----VSESDESS 197
I QI A+ LH I HRDIK N LF + ++ KL DFGL+ ++ +
Sbjct: 173 IMRQIFSALHYLHNQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYG 230
Query: 198 MVQPAGTIGYLDPGYTNPSKLS--KKVDVFSYGVVLLEIISCRKPIDAARDPASI 250
M AGT ++ P N + S K D +S GV+L ++ P D +I
Sbjct: 231 MTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI 285
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLS 76
F R +G G+ G V+ ++E+ + + I I + + Q +++ EI VL
Sbjct: 24 FIFKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRS------QVPMEQIEAEIEVLK 75
Query: 77 SLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ 136
SL N ++H N +VME G L + + +A A
Sbjct: 76 SLDHPNIIKIFEVFEDYH--------------NMYIVMETCEGGELLERI-VSAQARGKA 120
Query: 137 LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDS---KWDAKLADFGLA-VSE 192
L ++ Q+ A+ H ++H+D+K NILF K+ DFGLA + +
Sbjct: 121 LSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178
Query: 193 SDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
SDE S AGT Y+ P ++ K D++S GVV+ +++
Sbjct: 179 SDEHS-TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLT 220
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT 204
+ QI R ++ +H D IIHRD+K +N+ + + K+ DFGLA DE M T
Sbjct: 159 LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVAT 214
Query: 205 IGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
Y P N + VD++S G ++ E+++ R
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 37/232 (15%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G+G+ G V+ A + + D ++A+K E + + E +L+ LQ +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQREAELLTMLQHQH 81
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA-----------A 131
+V F G C + L+V E+M +G L L +
Sbjct: 82 -------IVRFFGV-CTEGRPL------LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 127
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
A P LG + +A Q++ + ++ +HRD+ + N L K+ DFG++
Sbjct: 128 APGP-LGLGQLLAVASQVAAGM--VYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS-R 183
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ + + G I ++ P K + + DV+S+GVVL EI + K
Sbjct: 184 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 37/232 (15%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G+G+ G V+ A + + D ++A+K E + + E +L+ LQ +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQREAELLTMLQHQH 75
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA-----------A 131
+V F G C + L+V E+M +G L L +
Sbjct: 76 -------IVRFFGV-CTEGRPL------LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 121
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
A P LG + +A Q++ + ++ +HRD+ + N L K+ DFG++
Sbjct: 122 APGP-LGLGQLLAVASQVAAGM--VYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS-R 177
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ + + G I ++ P K + + DV+S+GVVL EI + K
Sbjct: 178 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 91/238 (38%), Gaps = 41/238 (17%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R IG+G+ G V++A ++A+K E D E +++
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE---EASADMQADFQREAALMAEFD- 108
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT------ 134
NPN +V G L+ E+M G L + L + + T
Sbjct: 109 ----NPN--IVKLLGVCAVGKPMC-------LLFEYMAYGDLNEFLRSMSPHTVCSLSHS 155
Query: 135 -------------PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
P L ++ IA Q++ + L E +HRD+ + N L
Sbjct: 156 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMVV 213
Query: 182 KLADFGLA---VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
K+ADFGL+ S + A I ++ P ++ + + DV++YGVVL EI S
Sbjct: 214 KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 92
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + ++ME M G L L T P+ P
Sbjct: 93 QN-------IVRCIGVSLQSL-------PRFILMELMAGGDLKSFLRE----TRPRPSQP 134
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 191
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 138 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 143 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 141 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ D+GLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 9 ELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKR-----ASTNGFEVLQD 63
EL ++ R I GS+G+V + D + +AIKR + +L D
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGV------DSEGIPVAIKRVFNTVSDGRTVNILSD 69
Query: 64 N--SKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGS 121
+ K++ EIR+L+ N V+F + +KL ++ +
Sbjct: 70 SFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM----------HKLYLVTELMRTD 119
Query: 122 LYDLLHNAAAATTPQLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
L ++H+ +PQ ++ M I + LHE ++HRD+ NIL D
Sbjct: 120 LAQVIHDQRIVISPQ-----HIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNND 172
Query: 181 AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIIS 236
+ DF LA ++ +++ Y P K +K VD++S G V+ E+ +
Sbjct: 173 ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 145 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 138 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 30/219 (13%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
++IGKGS G V KA DH+ H+ +A+K + ++ EIR+L L++
Sbjct: 103 KVIGKGSFGQVVKAY--DHKV---HQHVALKMVRNE-----KRFHRQAAEEIRILEHLRK 152
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
+K N + + RN + + +LL M +LY+L+ P
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICM---TFELLSM------NLYELIKKNKFQG---FSLP 200
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA--KLADFGLAVSESDE-SS 197
K A I + + LH+N IIH D+K NIL + + K+ DFG + E +
Sbjct: 201 LVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT 258
Query: 198 MVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+Q + Y P ++ +D++S G +L E+++
Sbjct: 259 XIQ---SRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 138 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 9 ELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKR-----ASTNGFEVLQD 63
EL ++ R I GS+G+V + D + +AIKR + +L D
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGV------DSEGIPVAIKRVFNTVSDGRTVNILSD 69
Query: 64 N--SKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGS 121
+ K++ EIR+L+ N V+F + +KL ++ +
Sbjct: 70 SFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM----------HKLYLVTELMRTD 119
Query: 122 LYDLLHNAAAATTPQLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWD 180
L ++H+ +PQ ++ M I + LHE ++HRD+ NIL D
Sbjct: 120 LAQVIHDQRIVISPQ-----HIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNND 172
Query: 181 AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIIS 236
+ DF LA ++ +++ Y P K +K VD++S G V+ E+ +
Sbjct: 173 ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 141 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 30/219 (13%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
++IGKGS G V KA DH+ H+ +A+K + ++ EIR+L L++
Sbjct: 103 KVIGKGSFGQVVKAY--DHKV---HQHVALKMVRNE-----KRFHRQAAEEIRILEHLRK 152
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
+K N + + RN + + +LL M +LY+L+ P
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICM---TFELLSM------NLYELIKKNKFQG---FSLP 200
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA--KLADFGLAVSESDE-SS 197
K A I + + LH+N IIH D+K NIL + + K+ DFG + E +
Sbjct: 201 LVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT 258
Query: 198 MVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+Q + Y P ++ +D++S G +L E+++
Sbjct: 259 XIQ---SRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 137 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 138 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 137 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 115 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 122 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 118 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 116 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 107
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + ++ME M G L L T P+ P
Sbjct: 108 QN-------IVRCIGVSLQSL-------PRFILMELMAGGDLKSFLRE----TRPRPSQP 149
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 206
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQP---AGT 204
+I A++ LH IIHRD+K NIL + ++ DFG A S ES + GT
Sbjct: 117 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 205 IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
Y+ P K D+++ G ++ ++++ P A +
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 112 LVMEFMPNGSL-YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+V EFM L ++++ A A + QI A++ H+N+ IIHRD+K
Sbjct: 105 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHY--MRQILEALRYCHDNN--IIHRDVKP 160
Query: 171 TNILFDSKWDA---KLADFGLAVSESDESSMVQPA--GTIGYLDPGYTNPSKLSKKVDVF 225
+L SK ++ KL FG+A+ + ES +V GT ++ P K VDV+
Sbjct: 161 HCVLLASKENSAPVKLGGFGVAI-QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 219
Query: 226 SYGVVLLEIISCRKPIDAARD 246
GV+L ++S P ++
Sbjct: 220 GCGVILFILLSGCLPFYGTKE 240
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
K + F R+ G+G+ G+V L ++ G +AIK+ V+QD + N E
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQ---LGKEKSTG--MSVAIKK-------VIQDPRFR-NRE 66
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
++++ L + N F+ R+ + N +VME++P D LH
Sbjct: 67 LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLN----VVMEYVP-----DTLHRCCR 117
Query: 132 ATTPQLGWPNRVKIAM---QISRAIQCLHENDPMIIHRDIKSTNILF-DSKWDAKLADFG 187
+ P + I + Q+ R+I CLH + HRDIK N+L ++ KL DFG
Sbjct: 118 NYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG 177
Query: 188 LAVSESDESSMVQPAGTIGYLDPG--YTNPSKLSKKVDVFSYGVVLLEII 235
A S V + Y P + N + VD++S G + E++
Sbjct: 178 SAKKLSPSEPNVAYICSRYYRAPELIFGN-QHYTTAVDIWSVGCIFAEMM 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 90/234 (38%), Gaps = 35/234 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + R +G+GS G VY+ D +A+K + S L I
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---------NESASLRERIEF 67
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L+ ++ V R G V L+VME M +G L L +
Sbjct: 68 LNEASVMKGFTCHHVV--------RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 135 PQLGWP-----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA 189
G P +++A +I+ + L N +HR++ + N + + K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYL--NAKKFVHRNLAARNCMVAHDFTVKIGDFGMT 177
Query: 190 --VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ E+D G G L + P L V D++S+GVVL EI S
Sbjct: 178 RDIYETDYYR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 90/234 (38%), Gaps = 35/234 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + R +G+GS G VY+ D +A+K + S L I
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---------NESASLRERIEF 68
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L+ ++ V R G V L+VME M +G L L +
Sbjct: 69 LNEASVMKGFTCHHVV--------RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 120
Query: 135 PQLGWP-----NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA 189
G P +++A +I+ + L N +HR++ + N + + K+ DFG+
Sbjct: 121 NNPGRPPPTLQEMIQMAAEIADGMAYL--NAKKFVHRNLAARNCMVAHDFTVKIGDFGMT 178
Query: 190 --VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
+ E+D G G L + P L V D++S+GVVL EI S
Sbjct: 179 RDIYETDYYR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 112 LVMEFMPNGSL-YDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
+V EFM L ++++ A A + QI A++ H+N+ IIHRD+K
Sbjct: 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHY--MRQILEALRYCHDNN--IIHRDVKP 158
Query: 171 TNILFDSKWDA---KLADFGLAVSESDESSMVQPA--GTIGYLDPGYTNPSKLSKKVDVF 225
+L SK ++ KL FG+A+ + ES +V GT ++ P K VDV+
Sbjct: 159 HCVLLASKENSAPVKLGGFGVAI-QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
Query: 226 SYGVVLLEIISCRKPIDAARD 246
GV+L ++S P ++
Sbjct: 218 GCGVILFILLSGCLPFYGTKE 238
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 35/231 (15%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G+G+ G V+ A + + D ++A+K E + + E +L+ LQ +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQREAELLTMLQHQH 104
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSL----------YDLLHNAAAA 132
+V F G C + L+V E+M +G L LL
Sbjct: 105 -------IVRFFGV-CTEGRPL------LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 150
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
LG + +A Q++ + L +HRD+ + N L K+ DFG++ +
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS-RD 207
Query: 193 SDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRK 239
+ + G I ++ P K + + DV+S+GVVL EI + K
Sbjct: 208 IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S L
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKLNH 107
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 108 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 149
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 206
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S L
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKLNH 93
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 94 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 135
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 192
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 111 LLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKS 170
++ E+M NG L + L Q +++ + A++ L +HRD+ +
Sbjct: 80 FIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLESKQ--FLHRDLAA 133
Query: 171 TNILFDSKWDAKLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYG 228
N L + + K++DFGL+ V + + +S + + P SK S K D++++G
Sbjct: 134 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 229 VVLLEIISCRK 239
V++ EI S K
Sbjct: 194 VLMWEIYSLGK 204
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 120/307 (39%), Gaps = 60/307 (19%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E LIGKG G VY H +AI+ ++ +DN +L R
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRW--------HGEVAIRL-----IDIERDNEDQLKAFKRE 79
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+ + +++ N VV F G +C + + ++ +LY ++ +A
Sbjct: 80 VMAYRQTRHEN----VVLFMG-ACMSPPHL------AIITSLCKGRTLYSVVRDAKIV-- 126
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL------ 188
L +IA +I + + LH I+H+D+KS N+ +D+ + DFGL
Sbjct: 127 --LDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYDNG-KVVITDFGLFSISGV 181
Query: 189 AVSESDESSMVQPAGTIGYLDPGY-------TNPSKL--SKKVDVFSYGVVLLEIISCRK 239
+ E + G + +L P T KL SK DVF+ G + E+ +
Sbjct: 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREW 241
Query: 240 PIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENR 299
P PA I W + + L Q+ G K++ + C + E+E R
Sbjct: 242 PFKT--QPAEAIIWQMGTGMKPNLSQI------------GMGKEISDILLFCWAFEQEER 287
Query: 300 PGIGEIL 306
P +++
Sbjct: 288 PTFTKLM 294
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+ + Q++R ++ L IHRD+ + NIL K+ DFGLA V+
Sbjct: 202 ISYSFQVARGMEFLSSRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKG 259
Query: 203 GT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
T + ++ P S K DV+SYGV+L EI S
Sbjct: 260 DTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ DFGL DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 16 SFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVL 75
+++ ++IG GS G V++A L + D +AIK+ VLQD K N E++++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKL----VESDE--VAIKK-------VLQDKRFK-NRELQIM 86
Query: 76 SSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA-AATT 134
++ N VV+ N D LV+E++P H A T
Sbjct: 87 RIVKHPN-------VVDLKAFFYSNGDKKDEVFLN-LVLEYVPETVYRASRHYAKLKQTM 138
Query: 135 PQLGWPNRVKIAM-QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA-KLADFG----L 188
P L +K+ M Q+ R++ +H I HRDIK N+L D KL DFG L
Sbjct: 139 PML----LIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
Query: 189 AVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
E + S + L G TN + +D++S G V+ E++
Sbjct: 193 IAGEPNVSXICSRYYRAPELIFGATN---YTTNIDIWSTGCVMAELM 236
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 56/239 (23%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN- 70
++ E + L+G+GS+G V K +D +I+AIK+ + D+ K +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKD-----TGRIVAIKKFLES------DDDKMVKKI 70
Query: 71 ---EIRVLSSLQESN---------KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMP 118
EI++L L+ N K+ Y V F + + +E P
Sbjct: 71 AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD------------LELFP 118
Query: 119 NGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
NG Y ++ K QI I H ++ IIHRDIK NIL
Sbjct: 119 NGLDYQVVQ----------------KYLFQIINGIGFCHSHN--IIHRDIKPENILVSQS 160
Query: 179 WDAKLADFGLAVSESDESSMV-QPAGTIGYLDPG-YTNPSKLSKKVDVFSYGVVLLEII 235
KL DFG A + + + T Y P K K VDV++ G ++ E+
Sbjct: 161 GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 86/283 (30%)
Query: 7 YEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK 66
YE + + + F IG+G+ SVY A + Q + KI A+K
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQ-LQVGPEEKI-ALKHLIPT---------- 60
Query: 67 KLNNEIRVLSSLQ-------ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPN 119
++ IR+ + LQ + N YC N + ++ M ++ +
Sbjct: 61 --SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK--------------NDHVVIAMPYLEH 104
Query: 120 GSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKW 179
S D+L++ L + + + + +A++ +H+ I+HRD+K +N L++ +
Sbjct: 105 ESFLDILNS--------LSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRL 154
Query: 180 DA-KLADFGLAVSESD----------------------------ESSMVQP-AGTIGYLD 209
L DFGLA D V P AGT
Sbjct: 155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGT----- 209
Query: 210 PGYTNPSKLSK------KVDVFSYGVVLLEIISCRKPIDAARD 246
PG+ P L+K +D++S GV+ L ++S R P A D
Sbjct: 210 PGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 31/229 (13%)
Query: 13 ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEI 72
+ E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + I
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAI 53
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKL-LVMEFMPNGSLYDLLHNAAA 131
R +S L+E N N + H NKL LV E + DL A
Sbjct: 54 REISLLKELNHPNIVKLLDVIH------------TENKLYLVFEHVDQ----DLKKFMDA 97
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVS 191
+ + P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 98 SALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARA 155
Query: 192 ES-DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 156 FGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 92
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 93 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 134
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 191
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK-KLNNEIRVLSSLQES 81
+G+ G VYK L + +AIK L+D ++ L E R + L+ +
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIK--------TLKDKAEGPLREEFRHEAMLR-A 84
Query: 82 NKRNPNY-CVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----HNAAAAT-- 133
++PN C++ G V + ++ + +G L++ L H+ +T
Sbjct: 85 RLQHPNVVCLL----------GVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 134 ----TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL- 188
L P+ V + QI+ ++ L + ++H+D+ + N+L K + K++D GL
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLF 192
Query: 189 -AVSESDESSMV-QPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
V +D ++ I ++ P K S D++SYGVVL E+ S
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK-KLNNEIRVLSSLQES 81
+G+ G VYK L + +AIK L+D ++ L E R + L+ +
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIK--------TLKDKAEGPLREEFRHEAMLR-A 67
Query: 82 NKRNPNY-CVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----HNAAAAT-- 133
++PN C++ G V + ++ + +G L++ L H+ +T
Sbjct: 68 RLQHPNVVCLL----------GVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 134 ----TPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGL- 188
L P+ V + QI+ ++ L + ++H+D+ + N+L K + K++D GL
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 189 -AVSESDESSMV-QPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
V +D ++ I ++ P K S D++SYGVVL E+ S
Sbjct: 176 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 84
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 85 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 126
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 127 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 183
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 184 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 29/226 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E+F + IG+G++G VYKA ++ G+ ++A+K+ + + + IR
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGE--VVALKKIRLD-----TETEGVPSTAIRE 51
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
+S L+E N +PN + V NKL ++ + L + +A
Sbjct: 52 ISLLKELN--HPNIVKLL----------DVIHTENKLYLVFEHVHQDLKTFMDASALTGI 99
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSES- 193
P P Q+ + + H + ++HRD+K N+L +++ KLADFGLA +
Sbjct: 100 P---LPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154
Query: 194 DESSMVQPAGTIGYLDPGYTNPSK-LSKKVDVFSYGVVLLEIISCR 238
+ T+ Y P K S VD++S G + E+++ R
Sbjct: 155 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
+ ++ +L++E + G L+D L A L QI + LH I
Sbjct: 85 ENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDIKSTNILFDSK----WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSK 220
H D+K NI+ K KL DFGLA D GT ++ P N L
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 221 KVDVFSYGVVLLEIISCRKPI 241
+ D++S GV+ ++S P
Sbjct: 198 EADMWSIGVITYILLSGASPF 218
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
A Q+S A+ L +HRDI + N+L S KL DFGL+ D + G
Sbjct: 117 AYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 205 -IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
I ++ P N + + DV+ +GV + EI+
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 140 PNRV--KIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
P R K +Q+ A++ +H ++HRDIK N+ + KL D GL S +++
Sbjct: 134 PERTVWKYFVQLCSALEHMHSR--RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191
Query: 198 MVQP-AGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPI 241
GT Y+ P + + + K D++S G +L E+ + + P
Sbjct: 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
+ Q+++ ++ L IHRD+ + NIL K K+ DFGLA + V+
Sbjct: 199 SFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 205 --IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEK 262
+ ++ P + + DV+S+GV+L EI S + A+ P ID EE
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKID-------EEF 305
Query: 263 LRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
R++ + +R+ P + +M C E RP E++
Sbjct: 306 CRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELV 347
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G G++GSV A T H++ A+K+ S ++ ++K+ E+R+
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAF----DTKTGHRV-AVKKLSRPFQSII--HAKRTYRELRL 74
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATT 134
L ++ N V+ + S++ ++ LV M G+ + + T
Sbjct: 75 LKHMKHEN-------VIGLLDVFT-PARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTD 124
Query: 135 PQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESD 194
+ + + QI R ++ +H D IIHRD+K +N+ + + K+ DF LA D
Sbjct: 125 DHVQF-----LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDD 177
Query: 195 ESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
E M T Y P N ++ VD++S G ++ E+++ R
Sbjct: 178 E--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
+ Q+++ ++ L IHRD+ + NIL K K+ DFGLA + V+
Sbjct: 197 SFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 205 --IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEK 262
+ ++ P + + DV+S+GV+L EI S + A+ P ID EE
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKID-------EEF 303
Query: 263 LRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
R++ + +R+ P + +M C E RP E++
Sbjct: 304 CRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELV 345
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 67 KLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL 126
+ E R LQE + VV H + G +DG +L V + NG
Sbjct: 80 RXQREARTAGRLQEPH-------VVPIH-----DFGEIDG---QLYVDXRLINGV----- 119
Query: 127 HNAAAATTPQ--LGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLA 184
+ AA Q L P V I QI A+ H HRD+K NIL + A L
Sbjct: 120 -DLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAA--GATHRDVKPENILVSADDFAYLV 176
Query: 185 DFGLAVSESDE--SSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKP 240
DFG+A + +DE + + GT+ Y P + S + + D+++ VL E ++ P
Sbjct: 177 DFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPP 234
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 109
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 110 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 151
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 152 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 208
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 209 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 93
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 94 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 135
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-Q 192
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ME G L L + L + + A Q+S A+ L +HRDI +
Sbjct: 90 IIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 143
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGV 229
N+L S KL DFGL+ D + G I ++ P N + + DV+ +GV
Sbjct: 144 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 203
Query: 230 VLLEII 235
+ EI+
Sbjct: 204 CMWEIL 209
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
+ ++ +L++E + G L+D L A L QI + LH I
Sbjct: 85 ENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDIKSTNILFDSK----WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSK 220
H D+K NI+ K KL DFGLA D GT ++ P N L
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 221 KVDVFSYGVVLLEIISCRKPI 241
+ D++S GV+ ++S P
Sbjct: 198 EADMWSIGVITYILLSGASPF 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ FGLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
+ ++ +L++E + G L+D L A L QI + LH I
Sbjct: 85 ENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDIKSTNILFDSK----WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSK 220
H D+K NI+ K KL DFGLA D GT ++ P N L
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 221 KVDVFSYGVVLLEIISCRKPI 241
+ D++S GV+ ++S P
Sbjct: 198 EADMWSIGVITYILLSGASPF 218
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ME G L L + L + + A Q+S A+ L +HRDI +
Sbjct: 89 IIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 142
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGV 229
N+L S KL DFGL+ D + G I ++ P N + + DV+ +GV
Sbjct: 143 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 202
Query: 230 VLLEII 235
+ EI+
Sbjct: 203 CMWEIL 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
A Q+S A+ L +HRDI + N+L S KL DFGL+ D + G
Sbjct: 122 AYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 205 -IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
I ++ P N + + DV+ +GV + EI+
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
+ ++ +L++E + G L+D L A L QI + LH I
Sbjct: 85 ENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDIKSTNILFDSK----WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSK 220
H D+K NI+ K KL DFGLA D GT ++ P N L
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 221 KVDVFSYGVVLLEIISCRKPI 241
+ D++S GV+ ++S P
Sbjct: 198 EADMWSIGVITYILLSGASPF 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ME G L L + L + + A Q+S A+ L +HRDI +
Sbjct: 87 IIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 140
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGV 229
N+L S KL DFGL+ D + G I ++ P N + + DV+ +GV
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 200
Query: 230 VLLEII 235
+ EI+
Sbjct: 201 CMWEIL 206
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 93
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 94 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 135
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 192
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ME G L L + L + + A Q+S A+ L +HRDI +
Sbjct: 87 IIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 140
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGV 229
N+L S KL DFGL+ D + G I ++ P N + + DV+ +GV
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 200
Query: 230 VLLEII 235
+ EI+
Sbjct: 201 CMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ME G L L + L + + A Q+S A+ L +HRDI +
Sbjct: 84 IIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 137
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGT--IGYLDPGYTNPSKLSKKVDVFSYGV 229
N+L S KL DFGL+ D + G I ++ P N + + DV+ +GV
Sbjct: 138 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 197
Query: 230 VLLEII 235
+ EI+
Sbjct: 198 CMWEIL 203
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
+ ++ +L++E + G L+D L A L QI + LH I
Sbjct: 85 ENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDIKSTNILFDSK----WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSK 220
H D+K NI+ K KL DFGLA D GT ++ P N L
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 221 KVDVFSYGVVLLEIISCRKPI 241
+ D++S GV+ ++S P
Sbjct: 198 EADMWSIGVITYILLSGASPF 218
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
+ Q+++ ++ L IHRD+ + NIL K K+ DFGLA + V+
Sbjct: 204 SFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 205 --IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEK 262
+ ++ P + + DV+S+GV+L EI S + A+ P ID EE
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKID-------EEF 310
Query: 263 LRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
R++ + +R+ P + +M C E RP E++
Sbjct: 311 CRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELV 352
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
A Q+S A+ L +HRDI + N+L S KL DFGL+ D + G
Sbjct: 145 AYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 205 -IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
I ++ P N + + DV+ +GV + EI+
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 11/141 (7%)
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
+ ++ +L++E + G L+D L A L QI + LH I
Sbjct: 85 ENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDIKSTNILFDSK----WDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSK 220
H D+K NI+ K KL DFGLA D GT ++ P N L
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 221 KVDVFSYGVVLLEIISCRKPI 241
+ D++S GV+ ++S P
Sbjct: 198 EADMWSIGVITYILLSGASPF 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 36/270 (13%)
Query: 50 IKRASTNGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYC--VVNF----HGTSCRNSGS 103
+K + F V + K +NE+ + ++ K + N ++N H R
Sbjct: 23 VKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEV 82
Query: 104 VDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMI 163
+ ++ +VME+ G L++ + NA + + R IS C + +
Sbjct: 83 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEA----RFFFQQLISGVSYC---HAMQV 135
Query: 164 IHRDIKSTNILFDSKWDAKL--ADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK 221
HRD+K N L D +L DFG + S S QP T+G P Y P L KK
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVG--TPAYIAPEVLLKK 190
Query: 222 ------VDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPT 275
DV+S GV L ++ P + +P + + + ++ + + +P
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF---------RKTIHRILNVQYAIPD 241
Query: 276 FMEGAIKQMLHVAARCVSSEEENRPGIGEI 305
++ + + H+ +R ++ R I EI
Sbjct: 242 YVHIS-PECRHLISRIFVADPAKRISIPEI 270
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
+ Q+++ ++ L IHRD+ + NIL K K+ DFGLA + V+
Sbjct: 206 SFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 205 --IGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEK 262
+ ++ P + + DV+S+GV+L EI S + A+ P ID EE
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKID-------EEF 312
Query: 263 LRQVCD-SRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEIL 306
R++ + +R+ P + +M C E RP E++
Sbjct: 313 CRRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELV 354
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 99
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 100 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 141
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 142 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 198
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 199 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 119
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 120 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 161
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 162 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 218
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 219 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG G++G V A + G +AIK+ N F+V+ N+K+ E+++L + N
Sbjct: 62 IGNGAYGVVSSA---RRRLTGQQ--VAIKKIP-NAFDVVT-NAKRTLRELKILKHFKHDN 114
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ R + + +V++ M L+ ++H++ T + +
Sbjct: 115 -------IIAIKDI-LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRY--- 162
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-----VSESDESS 197
Q+ R ++ +H +IHRD+K +N+L + + K+ DFG+A +
Sbjct: 163 --FLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF 218
Query: 198 MVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCRK 239
M + T Y P + + ++ +D++S G + E+++ R+
Sbjct: 219 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
+G G++G+V A+ D +T I + R + +K+ E+R+L ++ N
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSEL-----FAKRAYRELRLLKHMRHEN 85
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
V+ + ++D ++ LVM FM L L+ + +LG
Sbjct: 86 -------VIGLLDVFTPDE-TLDDFTDFYLVMPFM-GTDLGKLMKHE------KLGEDRI 130
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPA 202
+ Q+ + ++ +H IIHRD+K N+ + + K+ DFGLA +S M
Sbjct: 131 QFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLA--RQADSEMXGXV 186
Query: 203 GTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
T Y P N + ++ VD++S G ++ E+I+ +
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 39/230 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK-KLNNEIRVLSSLQ 79
R +G G+ G VY+ + D +A+K EV + + E ++S
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP----EVYSEQDELDFLMEALIISKFN 106
Query: 80 ESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N +V G S ++ + +++E M G L L T P+
Sbjct: 107 HQN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQ 148
Query: 140 PNRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAV 190
P+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA- 205
Query: 191 SESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ +S + G + ++ P + K D +S+GV+L EI S
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESN 82
IG G++G V A + G +AIK+ N F+V+ N+K+ E+++L + N
Sbjct: 63 IGNGAYGVVSSA---RRRLTGQQ--VAIKKIP-NAFDVVT-NAKRTLRELKILKHFKHDN 115
Query: 83 KRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNR 142
++ R + + +V++ M L+ ++H++ T + +
Sbjct: 116 -------IIAIKDI-LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRY--- 163
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-----VSESDESS 197
Q+ R ++ +H +IHRD+K +N+L + + K+ DFG+A +
Sbjct: 164 --FLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF 219
Query: 198 MVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCRK 239
M + T Y P + + ++ +D++S G + E+++ R+
Sbjct: 220 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
A Q+S A+ L +HRDI + N+L S KL DFGL+ D + G
Sbjct: 497 AYQLSTALAYLESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 205 -IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
I ++ P N + + DV+ +GV + EI+
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 38/199 (19%)
Query: 1 MAENFDYEELVKATESFSQSRL--IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGF 58
MA+ +D E E +L IG+G+ G V+KA H+ G +A+K+
Sbjct: 1 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKA---RHRKTGQK--VALKK------ 49
Query: 59 EVLQDNSKK-----LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDG--NSNKL 111
VL +N K+ EI++L L+ N VVN CR S +
Sbjct: 50 -VLMENEKEGFPITALREIKILQLLKHEN-------VVNLIEI-CRTKASPYNRCKGSIY 100
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQ-ISRAIQCLHENDPMIIHRDIKS 170
LV +F + L LL N T + +K MQ + + +H N I+HRD+K+
Sbjct: 101 LVFDFCEH-DLAGLLSNVLVKFTL-----SEIKRVMQMLLNGLYYIHRNK--ILHRDMKA 152
Query: 171 TNILFDSKWDAKLADFGLA 189
N+L KLADFGLA
Sbjct: 153 ANVLITRDGVLKLADFGLA 171
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
L+ + P GSLY++LH Q VK A+ +R LH +P+I + S
Sbjct: 86 LITHWXPYGSLYNVLHEGTNFVVDQS---QAVKFALDXARGXAFLHTLEPLIPRHALNSR 142
Query: 172 NILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK--------VD 223
++ D D +S +D Q G P + P L KK D
Sbjct: 143 SVXIDE-------DXTARISXADVKFSFQSPGR--XYAPAWVAPEALQKKPEDTNRRSAD 193
Query: 224 VFSYGVVLLEIISCRKPI 241
+S+ V+L E+++ P
Sbjct: 194 XWSFAVLLWELVTREVPF 211
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 42/242 (17%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G+ G V A E D D K A T ++L+D++ K L++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 88
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++E+ G+L + L
Sbjct: 89 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 138
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 139 GMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 196
Query: 182 KLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEI 234
K+ADFGLA ++ D T G L + P L +V DV+S+GV++ EI
Sbjct: 197 KIADFGLARDINNIDXXKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 235 IS 236
+
Sbjct: 253 FT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 42/242 (17%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G+ G V A E D D K A T ++L+D++ K L++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 88
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++E+ G+L + L
Sbjct: 89 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 138
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 196
Query: 182 KLADFGLA--VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEI 234
K+ADFGLA ++ D T G L + P L +V DV+S+GV++ EI
Sbjct: 197 KIADFGLARDINNIDXXKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 235 IS 236
+
Sbjct: 253 FT 254
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ D GLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 56/244 (22%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + +G+G+ G V + + DH+ G L I + ++ + EI V
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCV--DHRRGGARVALKIIKN-------VEKYKEAARLEINV 83
Query: 75 LSSLQESNKRNPNYCV-----VNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA 129
L + E + N N CV ++HG C S +LL + S +D L +
Sbjct: 84 LEKINEKDPDNKNLCVQMFDWFDYHGHMC--------ISFELLGL------STFDFLKDN 129
Query: 130 AAATTPQLGWPNRVK-IAMQISRAIQCLHENDPMIIHRDIKSTNILF-----------DS 177
P ++V+ +A Q+ +A++ LH+N + H D+K NILF +
Sbjct: 130 NYLPYP----IHQVRHMAFQLCQAVKFLHDNK--LTHTDLKPENILFVNSDYELTYNLEK 183
Query: 178 KWD--------AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGV 229
K D ++ DFG A + + S + T Y P S+ DV+S G
Sbjct: 184 KRDERSVKSTAVRVVDFGSATFDHEHHSTI--VSTRHYRAPEVILELGWSQPCDVWSIGC 241
Query: 230 VLLE 233
++ E
Sbjct: 242 IIFE 245
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 68 LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH 127
+ NEI +++ L ++N H + + +L++EF+ G L+D +
Sbjct: 95 VKNEISIMNQLHHPK-------LINLHD-------AFEDKYEMVLILEFLSGGELFDRI- 139
Query: 128 NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK--WDAKLAD 185
AA ++ + Q ++ +HE+ I+H DIK NI+ ++K K+ D
Sbjct: 140 ---AAEDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIID 194
Query: 186 FGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAAR 245
FGLA + + + T + P + + D+++ GV+ ++S P
Sbjct: 195 FGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED 254
Query: 246 D 246
D
Sbjct: 255 D 255
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 30/202 (14%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+VME+ G L++ + NA + + + Q+ + H + HRD+K
Sbjct: 92 IVMEYASGGELFERICNAGRFSEDEARF-----FFQQLISGVSYCHAM--QVCHRDLKLE 144
Query: 172 NILFDSKWDAKL--ADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK------VD 223
N L D +L DFG + S S QP T+G P Y P L KK D
Sbjct: 145 NTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVG--TPAYIAPEVLLKKEYDGKVAD 199
Query: 224 VFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQ 283
V+S GV L ++ P + +P + + + ++ + + +P ++ + +
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEEPKNF---------RKTIHRILNVQYAIPDYVHIS-PE 249
Query: 284 MLHVAARCVSSEEENRPGIGEI 305
H+ +R ++ R I EI
Sbjct: 250 CRHLISRIFVADPAKRISIPEI 271
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ D GLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
QI R ++ +H D IIHRD+K +N+ + + K+ D GLA DE M T Y
Sbjct: 133 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDE--MTGYVATRWY 188
Query: 208 LDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
P N ++ VD++S G ++ E+++ R
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
A Q+S A+ L +HRDI + N+L + KL DFGL+ D + G
Sbjct: 117 AYQLSTALAYLESKR--FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 205 -IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
I ++ P N + + DV+ +GV + EI+
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
+ VD++S G ++ E++ C K + RD
Sbjct: 201 GYKENVDIWSVGCIMGEMV-CHKILFPGRD 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 146 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 205
Query: 217 KLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
+ VD++S G ++ E++ C K + RD
Sbjct: 206 GYKENVDLWSVGCIMGEMV-CHKILFPGRD 234
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 217 KLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
+ VD++S G ++ E++ C K + RD
Sbjct: 195 GYKENVDLWSVGCIMGEMV-CHKILFPGRD 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 110
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 111 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 152
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 153 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 209
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ + + G + ++ P + K D +S+GV+L EI S
Sbjct: 210 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNAAAATTPQLG 138
++N G +C G + +++E+ G+L + L +N + QL
Sbjct: 81 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 133
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 134 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
T G L + P L ++ DV+S+GV+L EI +
Sbjct: 192 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 30/236 (12%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G+ G V A E D D K A T ++L+D++ K L++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 88
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGS---VDGNSNKLLVMEFM----PNGSLYDL 125
+ ++ K ++N G +C G + G ++K + E++ P G Y
Sbjct: 89 SEMEMMKMIGKHK---NIINLLG-ACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYS- 143
Query: 126 LHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLAD 185
++ Q+ + + V Q++R ++ L IHRD+ + N+L K+AD
Sbjct: 144 -YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 186 FGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
FGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 201 FGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNAAAATTPQLG 138
++N G +C G + +++E+ G+L + L +N + QL
Sbjct: 88 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 140
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 141 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
T G L + P L ++ DV+S+GV+L EI +
Sbjct: 199 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 146 AMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT- 204
A Q+S A+ L +HRDI + N+L + KL DFGL+ D + G
Sbjct: 497 AYQLSTALAYLESK--RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 205 -IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
I ++ P N + + DV+ +GV + EI+
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNAAAATTPQLG 138
++N G +C G + +++E+ G+L + L +N + QL
Sbjct: 96 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 148
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 149 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
T G L + P L ++ DV+S+GV+L EI +
Sbjct: 207 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNAAAATTPQLG 138
++N G +C G + +++E+ G+L + L +N + QL
Sbjct: 85 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 137
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 138 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
T G L + P L ++ DV+S+GV+L EI +
Sbjct: 196 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNAAAATTPQLG 138
++N G +C G + +++E+ G+L + L +N + QL
Sbjct: 96 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 148
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 149 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
T G L + P L ++ DV+S+GV+L EI +
Sbjct: 207 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNAAAATTPQLG 138
++N G +C G + +++E+ G+L + L +N + QL
Sbjct: 89 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 141
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 142 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
T G L + P L ++ DV+S+GV+L EI +
Sbjct: 200 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
R +G G+ G VY+ + D +A+K E QD L E ++S
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLM-EALIISKFNH 133
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWP 140
N +V G S ++ + +++E M G L L T P+ P
Sbjct: 134 QN-------IVRCIGVSLQSL-------PRFILLELMAGGDLKSFLRE----TRPRPSQP 175
Query: 141 NRVKIA--MQISRAIQC----LHENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVS 191
+ + + + ++R I C L EN IHRDI + N L AK+ DFG+A
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-R 232
Query: 192 ESDESSMVQPAG----TIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIIS 236
+ + + G + ++ P + K D +S+GV+L EI S
Sbjct: 233 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNAAAATTPQLG 138
++N G +C G + +++E+ G+L + L +N + QL
Sbjct: 96 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLS 148
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 149 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
T G L + P L ++ DV+S+GV+L EI +
Sbjct: 207 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G+ G V A E D D K A T ++L+D++ K L++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 88
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++E+ G+L + L
Sbjct: 89 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 138
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 196
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
K+ADFGLA ++ T G L + P L +V DV+S+GV++ EI +
Sbjct: 197 KIADFGLARDINNIDYYKN--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLH-----------NAAAATTPQLG 138
++N G +C G + +++E+ G+L + L N + QL
Sbjct: 96 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS 148
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 149 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
T G L + P L ++ DV+S+GV+L EI +
Sbjct: 207 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 46/191 (24%)
Query: 7 YEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK 66
YE+L K IG+G+ G V+KA H+ G +A+K+ VL +N K
Sbjct: 20 YEKLAK----------IGQGTFGEVFKA---RHRKTGQK--VALKK-------VLMENEK 57
Query: 67 K-----LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDG--NSNKLLVMEFMPN 119
+ EI++L L+ N VVN CR S ++ LV +F +
Sbjct: 58 EGFPITALREIKILQLLKHEN-------VVNLIEI-CRTKASPYNRCKASIYLVFDFCEH 109
Query: 120 GSLYDLLHNAAAATTPQLGWPNRVKIAMQ-ISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
L LL N T + +K MQ + + +H N I+HRD+K+ N+L
Sbjct: 110 -DLAGLLSNVLVKFTL-----SEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD 161
Query: 179 WDAKLADFGLA 189
KLADFGLA
Sbjct: 162 GVLKLADFGLA 172
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 126/311 (40%), Gaps = 57/311 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS-----KKLNNE 71
S + +G G+ G V +A + ++ A T ++L+ ++ + L +E
Sbjct: 25 LSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 76
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-- 129
++VLS L N N +VN G +C G L++ E+ G L + L
Sbjct: 77 LKVLSYL--GNHMN----IVNLLG-ACTIGGPT------LVITEYCCYGDLLNFLRRKRD 123
Query: 130 ---AAATTPQL--------GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
+ T+P + + + + Q+++ + L + IHRD+ + NIL
Sbjct: 124 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHG 181
Query: 179 WDAKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
K+ DFGLA ++S+ V + ++ P + + DV+SYG+ L E+
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
Query: 236 SCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSE 295
S + ++ P +D + +E R + E A +M + C ++
Sbjct: 242 S----LGSSPYPGMPVDSKFYKMIKEGFRMLSP---------EHAPAEMYDIMKTCWDAD 288
Query: 296 EENRPGIGEIL 306
RP +I+
Sbjct: 289 PLKRPTFKQIV 299
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G G V A E D D K A T ++L+D++ K L++ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 80
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++E+ G+L + L
Sbjct: 81 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 130
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 131 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 188
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
K+ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 189 KIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 21 RLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQE 80
+++G+G GSV + L+ Q DG +A+K DNS + E + +
Sbjct: 40 KILGEGEFGSVMEGNLK--QEDGTSLKVAVKTMKL-------DNSSQREIEEFLSEAACM 90
Query: 81 SNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQ-LGW 139
+ +PN V+ G S G ++++ FM G L+ L + T P+ +
Sbjct: 91 KDFSHPN--VIRLLGVCIEMSSQ--GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL 146
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMV 199
+K + I+ ++ L + +HRD+ + N + +ADFGL S+ S
Sbjct: 147 QTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGL--SKKIYSGDY 202
Query: 200 QPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
G I + + L+ +V DV+++GV + EI +
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G G V A E D D K A T ++L+D++ K L++ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 75
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++E+ G+L + L
Sbjct: 76 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 125
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 126 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENNVM 183
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
K+ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 184 KIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
+ VD++S G ++ E++ C K + RD
Sbjct: 201 GYKENVDLWSVGCIMGEMV-CHKILFPGRD 229
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 90 VVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-----------HNAAAATTPQLG 138
++N G +C G + +++E+ G+L + L +N + QL
Sbjct: 137 IINLLG-ACTQDGPL------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 189
Query: 139 WPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA--VSESDES 196
+ V A Q++R ++ L IHRD+ + N+L K+ADFGLA + D
Sbjct: 190 SKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 197 SMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIISCRKPIDAARDPASII 251
T G L + P L ++ DV+S+GV+L EI + + + P +
Sbjct: 248 KKT----TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPV 299
Query: 252 DWALPLIKE 260
+ L+KE
Sbjct: 300 EELFKLLKE 308
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + MV T Y P
Sbjct: 143 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGM 202
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E+I
Sbjct: 203 GYKENVDIWSVGCIMGEMI 221
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 126/311 (40%), Gaps = 57/311 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS-----KKLNNE 71
S + +G G+ G V +A + ++ A T ++L+ ++ + L +E
Sbjct: 48 LSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 99
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-- 129
++VLS L N N +VN G +C G L++ E+ G L + L
Sbjct: 100 LKVLSYL--GNHMN----IVNLLG-ACTIGGPT------LVITEYCCYGDLLNFLRRKRD 146
Query: 130 ---AAATTPQL--------GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
+ T+P + + + + Q+++ + L + IHRD+ + NIL
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHG 204
Query: 179 WDAKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
K+ DFGLA ++S+ V + ++ P + + DV+SYG+ L E+
Sbjct: 205 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 236 SCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSE 295
S + ++ P +D + +E R + E A +M + C ++
Sbjct: 265 S----LGSSPYPGMPVDSKFYKMIKEGFRMLSP---------EHAPAEMYDIMKTCWDAD 311
Query: 296 EENRPGIGEIL 306
RP +I+
Sbjct: 312 PLKRPTFKQIV 322
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 126/311 (40%), Gaps = 57/311 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS-----KKLNNE 71
S + +G G+ G V +A + ++ A T ++L+ ++ + L +E
Sbjct: 43 LSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 94
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-- 129
++VLS L N N +VN G +C G L++ E+ G L + L
Sbjct: 95 LKVLSYL--GNHMN----IVNLLG-ACTIGGPT------LVITEYCCYGDLLNFLRRKRD 141
Query: 130 ---AAATTPQL--------GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
+ T+P + + + + Q+++ + L + IHRD+ + NIL
Sbjct: 142 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHG 199
Query: 179 WDAKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
K+ DFGLA ++S+ V + ++ P + + DV+SYG+ L E+
Sbjct: 200 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
Query: 236 SCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSE 295
S + ++ P +D + +E R + E A +M + C ++
Sbjct: 260 S----LGSSPYPGMPVDSKFYKMIKEGFRMLSP---------EHAPAEMYDIMKTCWDAD 306
Query: 296 EENRPGIGEIL 306
RP +I+
Sbjct: 307 PLKRPTFKQIV 317
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 126/311 (40%), Gaps = 57/311 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS-----KKLNNE 71
S + +G G+ G V +A + ++ A T ++L+ ++ + L +E
Sbjct: 41 LSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 92
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-- 129
++VLS L N N +VN G +C G L++ E+ G L + L
Sbjct: 93 LKVLSYL--GNHMN----IVNLLG-ACTIGGPT------LVITEYCCYGDLLNFLRRKRD 139
Query: 130 ---AAATTPQL--------GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
+ T+P + + + + Q+++ + L + IHRD+ + NIL
Sbjct: 140 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHG 197
Query: 179 WDAKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
K+ DFGLA ++S+ V + ++ P + + DV+SYG+ L E+
Sbjct: 198 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
Query: 236 SCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSE 295
S + ++ P +D + +E R + E A +M + C ++
Sbjct: 258 S----LGSSPYPGMPVDSKFYKMIKEGFRMLSP---------EHAPAEMYDIMKTCWDAD 304
Query: 296 EENRPGIGEIL 306
RP +I+
Sbjct: 305 PLKRPTFKQIV 315
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
Q+ I+ LH IIHRD+K +NI+ S K+ DFGLA + M T Y
Sbjct: 134 QMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 208 LDPGYTNPSKLSKKVDVFSYGVVLLEII 235
P + VD++S GV++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G G V A E D D K A T ++L+D++ K L++ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 77
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++E+ G+L + L
Sbjct: 78 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 127
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 128 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 185
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
K+ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 186 KIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G+ G V A E D D K A T ++L+D++ K L++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 88
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++E+ G+L + L
Sbjct: 89 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 138
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 196
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
++ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 197 RIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G G V A E D D K A T ++L+D++ K L++ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 134
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++E+ G+L + L
Sbjct: 135 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 184
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 185 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 242
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
K+ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 243 KIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 126/311 (40%), Gaps = 57/311 (18%)
Query: 17 FSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS-----KKLNNE 71
S + +G G+ G V +A + ++ A T ++L+ ++ + L +E
Sbjct: 48 LSFGKTLGAGAFGKVVEAT--------AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 99
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNA-- 129
++VLS L N N +VN G +C G L++ E+ G L + L
Sbjct: 100 LKVLSYL--GNHMN----IVNLLG-ACTIGGPT------LVITEYCCYGDLLNFLRRKRD 146
Query: 130 ---AAATTPQL--------GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
+ T+P + + + + Q+++ + L + IHRD+ + NIL
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHG 204
Query: 179 WDAKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVLLEII 235
K+ DFGLA ++S+ V + ++ P + + DV+SYG+ L E+
Sbjct: 205 RITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 236 SCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSE 295
S + ++ P +D + +E R + E A +M + C ++
Sbjct: 265 S----LGSSPYPGMPVDSKFYKMIKEGFRMLSP---------EHAPAEMYDIMKTCWDAD 311
Query: 296 EENRPGIGEIL 306
RP +I+
Sbjct: 312 PLKRPTFKQIV 322
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
Q+ I+ LH IIHRD+K +NI+ S K+ DFGLA + M T Y
Sbjct: 134 QMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 208 LDPGYTNPSKLSKKVDVFSYGVVLLEII 235
P + VD++S GV++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 30/202 (14%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+VME+ G L++ + NA + + + Q+ + H + HRD+K
Sbjct: 92 IVMEYASGGELFERICNAGRFSEDEARF-----FFQQLISGVSYAHAM--QVAHRDLKLE 144
Query: 172 NILFDSKWDAKL--ADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK------VD 223
N L D +L ADFG + + S QP +G P Y P L KK D
Sbjct: 145 NTLLDGSPAPRLKIADFGYSKASVLHS---QPKSAVG--TPAYIAPEVLLKKEYDGKVAD 199
Query: 224 VFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEGAIKQ 283
V+S GV L ++ P + +P + + + ++ + + +P ++ + +
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEEPKNF---------RKTIHRILNVQYAIPDYVHIS-PE 249
Query: 284 MLHVAARCVSSEEENRPGIGEI 305
H+ +R ++ R I EI
Sbjct: 250 CRHLISRIFVADPAKRISIPEI 271
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 83/191 (43%), Gaps = 46/191 (24%)
Query: 7 YEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK 66
YE+L K IG+G+ G V+KA H+ G +A+K+ VL +N K
Sbjct: 20 YEKLAK----------IGQGTFGEVFKA---RHRKTGQK--VALKK-------VLMENEK 57
Query: 67 K-----LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDG--NSNKLLVMEFMPN 119
+ EI++L L+ N VVN CR S + LV +F +
Sbjct: 58 EGFPITALREIKILQLLKHEN-------VVNLIEI-CRTKASPYNRCKGSIYLVFDFCEH 109
Query: 120 GSLYDLLHNAAAATTPQLGWPNRVKIAMQ-ISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
L LL N T + +K MQ + + +H N I+HRD+K+ N+L
Sbjct: 110 -DLAGLLSNVLVKFTL-----SEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD 161
Query: 179 WDAKLADFGLA 189
KLADFGLA
Sbjct: 162 GVLKLADFGLA 172
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
+ + + +G+G+ G V A E D D K A T ++L+D++ + + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATE-EDLSDL 87
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL-------- 126
+S ++ + ++N G +C G + +++E+ G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPPGM 140
Query: 127 ---HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKL 183
++ Q+ + + V Q++R ++ L IHRD+ + N+L K+
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKI 198
Query: 184 ADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 199 ADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + S M T Y P
Sbjct: 139 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGM 198
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 199 GYKENVDIWSVGCIMGELV 217
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 83/191 (43%), Gaps = 46/191 (24%)
Query: 7 YEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSK 66
YE+L K IG+G+ G V+KA H+ G +A+K+ VL +N K
Sbjct: 20 YEKLAK----------IGQGTFGEVFKA---RHRKTGQK--VALKK-------VLMENEK 57
Query: 67 K-----LNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDG--NSNKLLVMEFMPN 119
+ EI++L L+ N VVN CR S + LV +F +
Sbjct: 58 EGFPITALREIKILQLLKHEN-------VVNLIEI-CRTKASPYNRCKGSIYLVFDFCEH 109
Query: 120 GSLYDLLHNAAAATTPQLGWPNRVKIAMQ-ISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
L LL N T + +K MQ + + +H N I+HRD+K+ N+L
Sbjct: 110 -DLAGLLSNVLVKFTL-----SEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD 161
Query: 179 WDAKLADFGLA 189
KLADFGLA
Sbjct: 162 GVLKLADFGLA 172
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 40/229 (17%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLN-NE 71
E + + IG+GS+G V+K D +I+AIK+ F +D+ KK+ E
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRD-----TGQIVAIKK-----FLESEDDPVIKKIALRE 52
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
IR+L L+ N +VN R LV E+ + L++L
Sbjct: 53 IRMLKQLKHPN-------LVNLLEVFRRKR-------RLHLVFEYCDHTVLHEL------ 92
Query: 132 ATTPQLGWPNRV--KIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA 189
Q G P + I Q +A+ H+++ IHRD+K NIL KL DFG A
Sbjct: 93 -DRYQRGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFA 149
Query: 190 VSESDESSMV-QPAGTIGYLDPG-YTNPSKLSKKVDVFSYGVVLLEIIS 236
+ S T Y P ++ VDV++ G V E++S
Sbjct: 150 RLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 20/144 (13%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
++ME+ G LY+ + NA + + + Q+ + H I HRD+K
Sbjct: 93 IIMEYASGGELYERICNAGRFSEDEARF-----FFQQLLSGVSYCHSM--QICHRDLKLE 145
Query: 172 NILFDSKWDAKL--ADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKL------SKKVD 223
N L D +L DFG + S S QP T+G P Y P L K D
Sbjct: 146 NTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVG--TPAYIAPEVLLRQEYDGKIAD 200
Query: 224 VFSYGVVLLEIISCRKPIDAARDP 247
V+S GV L ++ P + +P
Sbjct: 201 VWSCGVTLYVMLVGAYPFEDPEEP 224
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 104 VDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMI 163
V G+ N +LV EF+ GSL L + W ++++A Q++ A+ L EN +
Sbjct: 82 VCGDEN-ILVQEFVKFGSLDTYLKKNKNCIN--ILW--KLEVAKQLAAAMHFLEEN--TL 134
Query: 164 IHRDIKSTNILFDSKWD--------AKLADFGLAVSESDESSMVQPAGTIGYLDPG-YTN 214
IH ++ + NIL + D KL+D G++++ + + + I ++ P N
Sbjct: 135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE---RIPWVPPECIEN 191
Query: 215 PSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLP 274
P L+ D +S+G L EI S P S +D + KL Q + R LP
Sbjct: 192 PKNLNLATDKWSFGTTLWEICS------GGDKPLSALD------SQRKL-QFYEDRHQLP 238
Query: 275 TFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFFV 314
+ +++ C+ E ++RP I+ + F
Sbjct: 239 APKAAELANLIN---NCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 94 HGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAI 153
H N G +LV EF+ GSL L + W ++++A Q++ A+
Sbjct: 71 HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCIN--ILW--KLEVAKQLAWAM 126
Query: 154 QCLHENDPMIIHRDIKSTNILFDSKWD--------AKLADFGLAVSESDESSMVQPAGTI 205
L EN +IH ++ + NIL + D KL+D G++++ + + + I
Sbjct: 127 HFLEEN--TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE---RI 181
Query: 206 GYLDPG-YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLR 264
++ P NP L+ D +S+G L EI S P S +D + KL
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICS------GGDKPLSALD------SQRKL- 228
Query: 265 QVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILMGCSCFFV 314
Q + R LP + +++ C+ E ++RP I+ + F
Sbjct: 229 QFYEDRHQLPAPKAAELANLIN---NCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 147 MQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMV-QPAGTI 205
Q+ R + H ++HRD+K N+L + + + KLADFGLA ++S + T+
Sbjct: 107 FQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL 164
Query: 206 GYLDPG-YTNPSKLSKKVDVFSYGVVLLEIISCR 238
Y P + S ++D++ G + E+ + R
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G+ G V A E D D K A T ++L+D++ K L++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 88
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K +++ G +C G + +++E+ G+L + L
Sbjct: 89 SEMEMMKMIGKHK---NIIHLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 138
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 196
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
K+ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 197 KIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 107/270 (39%), Gaps = 36/270 (13%)
Query: 50 IKRASTNGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYC--VVNF----HGTSCRNSGS 103
+K + F V + K +NE+ + ++ K + N ++N H R
Sbjct: 24 VKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 104 VDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMI 163
+ ++ +VME+ G L++ + NA + + + Q+ + H +
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF-----FFQQLISGVSYCHAM--QV 136
Query: 164 IHRDIKSTNILFDSKWDAKL--ADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK 221
HRD+K N L D +L FG + S S QP T+G P Y P L KK
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHS---QPKSTVG--TPAYIAPEVLLKK 191
Query: 222 ------VDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPT 275
DV+S GV L ++ P + +P + + + ++ + + +P
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF---------RKTIHRILNVQYAIPD 242
Query: 276 FMEGAIKQMLHVAARCVSSEEENRPGIGEI 305
++ + + H+ +R ++ R I EI
Sbjct: 243 YVHIS-PECRHLISRIFVADPAKRISIPEI 271
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E+I
Sbjct: 202 GYKENVDIWSVGCIMGEMI 220
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G+ G V A E D D K A T ++L+D++ K L++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 88
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++ G +C G + +++E+ G+L + L
Sbjct: 89 SEMEMMKMIGKHK---NIITLLG-ACTQDGPL------YVIVEYASKGNLREYLRARRPP 138
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 196
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
K+ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 197 KIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E P GSL D L LG +R A+Q++ + L IHRD+ +
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFL--LGTLSRY--AVQVAEGMGYLESK--RFIHRDLAAR 150
Query: 172 NILFDSKWDAKLADFGL--AVSESDESSMVQPAGTI--GYLDPGYTNPSKLSKKVDVFSY 227
N+L ++ K+ DFGL A+ ++D+ ++Q + + P S D + +
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
Query: 228 GVVLLEIIS 236
GV L E+ +
Sbjct: 211 GVTLWEMFT 219
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNS--KKLNNEI 72
+ + + +G+G+ G V A E D D K A T ++L+D++ K L++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMA--EAVGIDKDKP----KEAVTVAVKMLKDDATEKDLSDLV 88
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLL------ 126
+ ++ K ++N G +C G + +++ + G+L + L
Sbjct: 89 SEMEMMKMIGKHK---NIINLLG-ACTQDGPL------YVIVAYASKGNLREYLRARRPP 138
Query: 127 -----HNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
++ Q+ + + V Q++R ++ L IHRD+ + N+L
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVM 196
Query: 182 KLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV-----DVFSYGVVLLEIIS 236
K+ADFGLA ++ + T G L + P L +V DV+S+GV++ EI +
Sbjct: 197 KIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E P GSL D L LG +R A+Q++ + L IHRD+ +
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFL--LGTLSRY--AVQVAEGMGYLESK--RFIHRDLAAR 140
Query: 172 NILFDSKWDAKLADFGL--AVSESDESSMVQPAGTI--GYLDPGYTNPSKLSKKVDVFSY 227
N+L ++ K+ DFGL A+ ++D+ ++Q + + P S D + +
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 228 GVVLLEIIS 236
GV L E+ +
Sbjct: 201 GVTLWEMFT 209
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 43/245 (17%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKK--LNNEI 72
E+ +++G G+ G V A G +A+K D+S++ L +E+
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-----DSSEREALMSEL 99
Query: 73 RVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAAA 132
++++ L +VN G +C SG + L+ E+ G L + L +
Sbjct: 100 KMMTQLGSHEN------IVNLLG-ACTLSGPI------YLIFEYCCYGDLLNYLRSKREK 146
Query: 133 -TTPQLGWPNRVKI-----------------AMQISRAIQCLHENDPMIIHRDIKSTNIL 174
+ ++ + N+ ++ A Q+++ ++ L +HRD+ + N+L
Sbjct: 147 FSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVL 204
Query: 175 FDSKWDAKLADFGLAVSESDESSMVQPAGT---IGYLDPGYTNPSKLSKKVDVFSYGVVL 231
K+ DFGLA +S+ V + ++ P + K DV+SYG++L
Sbjct: 205 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
Query: 232 LEIIS 236
EI S
Sbjct: 265 WEIFS 269
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E P GSL D L LG +R A+Q++ + L IHRD+ +
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFL--LGTLSRY--AVQVAEGMGYLESK--RFIHRDLAAR 140
Query: 172 NILFDSKWDAKLADFGL--AVSESDESSMVQPAGTI--GYLDPGYTNPSKLSKKVDVFSY 227
N+L ++ K+ DFGL A+ ++D+ ++Q + + P S D + +
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 228 GVVLLEIIS 236
GV L E+ +
Sbjct: 201 GVTLWEMFT 209
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 107/270 (39%), Gaps = 36/270 (13%)
Query: 50 IKRASTNGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYC--VVNF----HGTSCRNSGS 103
+K + F V + K +NE+ + ++ K + N ++N H R
Sbjct: 24 VKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 104 VDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMI 163
+ ++ +VME+ G L++ + NA + + + Q+ + H +
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF-----FFQQLISGVSYCHAM--QV 136
Query: 164 IHRDIKSTNILFDSKWDAKL--ADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKK 221
HRD+K N L D +L FG + S S QP T+G P Y P L KK
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHS---QPKDTVG--TPAYIAPEVLLKK 191
Query: 222 ------VDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPT 275
DV+S GV L ++ P + +P + + + ++ + + +P
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF---------RKTIHRILNVQYAIPD 242
Query: 276 FMEGAIKQMLHVAARCVSSEEENRPGIGEI 305
++ + + H+ +R ++ R I EI
Sbjct: 243 YVHIS-PECRHLISRIFVADPAKRISIPEI 271
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 151 RAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDP 210
+ I+ LH IIHRDIK +N+L K+ADFG VS + S + T+G P
Sbjct: 148 KGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFG--VSNEFKGSDALLSNTVG--TP 201
Query: 211 GYTNPSKLS--------KKVDVFSYGVVLLEIISCRKPIDAAR 245
+ P LS K +DV++ GV L + + P R
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E P GSL D L LG +R A+Q++ + L IHRD+ +
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFL--LGTLSRY--AVQVAEGMGYLESK--RFIHRDLAAR 144
Query: 172 NILFDSKWDAKLADFGL--AVSESDESSMVQPAGTI--GYLDPGYTNPSKLSKKVDVFSY 227
N+L ++ K+ DFGL A+ ++D+ ++Q + + P S D + +
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
Query: 228 GVVLLEIIS 236
GV L E+ +
Sbjct: 205 GVTLWEMFT 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E P GSL D L LG +R A+Q++ + L IHRD+ +
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFL--LGTLSRY--AVQVAEGMGYLESK--RFIHRDLAAR 144
Query: 172 NILFDSKWDAKLADFGL--AVSESDESSMVQPAGTI--GYLDPGYTNPSKLSKKVDVFSY 227
N+L ++ K+ DFGL A+ ++D+ ++Q + + P S D + +
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
Query: 228 GVVLLEIIS 236
GV L E+ +
Sbjct: 205 GVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E P GSL D L LG +R A+Q++ + L IHRD+ +
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFL--LGTLSRY--AVQVAEGMGYLESK--RFIHRDLAAR 150
Query: 172 NILFDSKWDAKLADFGL--AVSESDESSMVQPAGTI--GYLDPGYTNPSKLSKKVDVFSY 227
N+L ++ K+ DFGL A+ ++D+ ++Q + + P S D + +
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
Query: 228 GVVLLEIIS 236
GV L E+ +
Sbjct: 211 GVTLWEMFT 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 37/243 (15%)
Query: 1 MAENFDYEELVKATESFSQS----RLIGKGSHGSV---YKAILEDHQTDGDHKILAIKRA 53
M F +EL K Q R +G G++GSV Y A L +A+K+
Sbjct: 2 MRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--------VAVKKL 53
Query: 54 STNGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLV 113
S F+ L ++++ E+R+L L+ N V+ + S++ S LV
Sbjct: 54 S-RPFQSLI-HARRTYRELRLLKHLKHEN-------VIGLLDVFT-PATSIEDFSEVYLV 103
Query: 114 MEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNI 173
M G+ + + A + + + + Q+ R ++ +H IIHRD+K +N+
Sbjct: 104 TTLM--GADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIHSAG--IIHRDLKPSNV 154
Query: 174 LFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYT-NPSKLSKKVDVFSYGVVLL 232
+ + ++ DFGLA +E M T Y P N ++ VD++S G ++
Sbjct: 155 AVNEDCELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 233 EII 235
E++
Sbjct: 213 ELL 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 201 GYAANVDIWSVGCIMGELV 219
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 14/188 (7%)
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
D + LV E M G L D + + + + + I + ++ LH ++
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQG--VV 143
Query: 165 HRDIKSTNILF-DSKWDA---KLADFGLAVSESDESSMV-QPAGTIGYLDPGYTNPSKLS 219
HRD+K +NIL+ D + ++ DFG A E+ ++ P T ++ P
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 220 KKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEG 279
+ D++S G++L +++ P A P+ + L I K + + +
Sbjct: 204 EGCDIWSLGILLYTMLAGYTPF--ANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 280 AIKQMLHV 287
+ +MLHV
Sbjct: 262 LVSKMLHV 269
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
Q+ I+ LH IIHRD+K +NI+ S K+ DFGLA + M T Y
Sbjct: 127 QMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 184
Query: 208 LDPGYTNPSKLSKKVDVFSYGVVLLEII 235
P + VD++S G ++ E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
+V E P GSL D L LG +R A+Q++ + L IHRD+ +
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFL--LGTLSRY--AVQVAEGMGYLESK--RFIHRDLAAR 140
Query: 172 NILFDSKWDAKLADFGL--AVSESDESSMVQPAGTI--GYLDPGYTNPSKLSKKVDVFSY 227
N+L ++ K+ DFGL A+ ++D+ ++Q + + P S D + +
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 228 GVVLLEIIS 236
GV L E+ +
Sbjct: 201 GVTLWEMFT 209
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
Q+ I+ LH IIHRD+K +NI+ S K+ DFGLA + M T Y
Sbjct: 134 QMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 208 LDPGYTNPSKLSKKVDVFSYGVVLLEII 235
P + VD++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 14/188 (7%)
Query: 105 DGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMII 164
D + LV E M G L D + + + + + I + ++ LH ++
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQG--VV 143
Query: 165 HRDIKSTNILF-DSKWDA---KLADFGLAVSESDESSMVQ-PAGTIGYLDPGYTNPSKLS 219
HRD+K +NIL+ D + ++ DFG A E+ ++ P T ++ P
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 220 KKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWALPLIKEEKLRQVCDSRVGLPTFMEG 279
+ D++S G++L +++ P A P+ + L I K + + +
Sbjct: 204 EGCDIWSLGILLYTMLAGYTPF--ANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 280 AIKQMLHV 287
+ +MLHV
Sbjct: 262 LVSKMLHV 269
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 36/185 (19%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
VK +++ LIG+GS+G VY A +K +AIK+ + FE L D K++
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLA-----YDKNANKNVAIKKVN-RMFEDLID-CKRILR 76
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI +L+ L+ ++ H ++ + + LY +L A
Sbjct: 77 EITILNRLKSD-------YIIRLHDL--------------IIPEDLLKFDELYIVLEIAD 115
Query: 131 A-----ATTPQLGWPNRVK-IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLA 184
+ TP VK I + + +HE+ IIHRD+K N L + K+
Sbjct: 116 SDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG--IIHRDLKPANCLLNQDCSVKIC 173
Query: 185 DFGLA 189
DFGLA
Sbjct: 174 DFGLA 178
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 52/292 (17%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTN---GFEVLQDNSKKLNNEIRVLSSL 78
L+GKG G+V+ H+ D +AIK N G+ L D S E+ +L +
Sbjct: 38 LLGKGGFGTVFAG----HRLT-DRLQVAIKVIPRNRVLGWSPLSD-SVTCPLEVALLWKV 91
Query: 79 QESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEF-MPNGSLYDLLHNAAAATTPQL 137
H R + +LV+E +P L+D + P
Sbjct: 92 GAGGG----------HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG----PLG 137
Query: 138 GWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWD-AKLADFGLAVSESDES 196
P+R Q+ AIQ H ++HRDIK NIL D + AKL DFG DE
Sbjct: 138 EGPSRCFFG-QVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE- 193
Query: 197 SMVQPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPIDAARDPASIIDWAL 255
GT Y P + + + + V+S G++L +++ P
Sbjct: 194 PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF-------------- 239
Query: 256 PLIKEEKLRQVCDSRVGLPTFMEGAIKQMLHVAARCVSSEEENRPGIGEILM 307
E+ +++ ++ + P + ++ RC++ + +RP + EIL+
Sbjct: 240 -----ERDQEILEAELHFPAHVSPDCCALIR---RCLAPKPSSRPSLEEILL 283
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 30/138 (21%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIH 165
G L+VME + G L+ + + + +I I AIQ LH + I H
Sbjct: 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTER---EASEIMKSIGEAIQYLHSIN--IAH 140
Query: 166 RDIKSTNILFDSKWD---AKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKLSKKV 222
RD+K N+L+ SK KL DFG A + E K K
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTGE---------------------KYDKSC 179
Query: 223 DVFSYGVVLLEIISCRKP 240
D++S GV++ I+ C P
Sbjct: 180 DMWSLGVIMY-ILLCGYP 196
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
Q+ I+ LH IIHRD+K +NI+ S K+ DFGLA + M T Y
Sbjct: 134 QMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 208 LDPGYTNPSKLSKKVDVFSYGVVLLEII 235
P + VD++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 195 GYKENVDIWSVGCIMGEMV 213
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGY 207
Q+ I+ LH IIHRD+K +NI+ S K+ DFGLA + M T Y
Sbjct: 134 QMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 208 LDPGYTNPSKLSKKVDVFSYGVVLLEII 235
P + VD++S G ++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 202 GYKENVDIWSVGCIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 194 GYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 202 GYKENVDIWSVGCIMGEMV 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 239 GYKENVDIWSVGCIMGEMV 257
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 239 GYKENVDIWSVGCIMGEMV 257
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 199
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 200 GYKENVDIWSVGCIMGEMV 218
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 195 GYKENVDIWSVGCIMGEMV 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 157 HENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPS 216
H + IIHRD+K +NI+ S K+ DFGLA + M T Y P
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 27/121 (22%)
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF--DSKWDAK-----------LADFG 187
N + + QI+ + LH IIHRD+K NIL S++ A ++DFG
Sbjct: 116 NPISLLRQIASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 188 L-----AVSESDESSMVQPAGTIGYLDPGYTNPS-------KLSKKVDVFSYGVVLLEII 235
L + S +++ P+GT G+ P S +L++ +D+FS G V I+
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 236 S 236
S
Sbjct: 234 S 234
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT 204
+ Q+ R ++ +H IIHRD+K +N+ + + ++ DFGLA +E M T
Sbjct: 136 LVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVAT 191
Query: 205 IGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
Y P N ++ VD++S G ++ E++ +
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESSMVQPAGT 204
+ Q+ R ++ +H IIHRD+K +N+ + + ++ DFGLA +E M T
Sbjct: 136 LVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVAT 191
Query: 205 IGYLDPGYT-NPSKLSKKVDVFSYGVVLLEIISCR 238
Y P N ++ VD++S G ++ E++ +
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 65/165 (39%), Gaps = 22/165 (13%)
Query: 112 LVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKST 171
LVME+ G L LL ++ R +A +I AI +H +HRDIK
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMA---RFYLA-EIVMAIDSVHRLG--YVHRDIKPD 191
Query: 172 NILFDSKWDAKLADFG--LAVSESDESSMVQPAGTIGYLDPGYTNP-------SKLSKKV 222
NIL D +LADFG L + + GT YL P +
Sbjct: 192 NILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPEC 251
Query: 223 DVFSYGVVLLEIISCRKPIDA---ARDPASIIDW----ALPLIKE 260
D ++ GV E+ + P A A I+ + +LPL+ E
Sbjct: 252 DWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDE 296
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILF----DSKWDAKLADFGLAVSESDESSMVQ 200
+ I++ ++ LH ++HRD+K +NIL+ + ++ DFG A E+ ++
Sbjct: 121 VLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 201 -PAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
P T ++ P D++S GV+L +++ P D
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD 225
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 35/226 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + IG+G++G VYKA +T KI K ++ EI +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR--------EISI 53
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG--SLYDLLHNAAAA 132
L L+ SN +V + + +LV E + L D+ +
Sbjct: 54 LKELKHSN-------IVKLYDV-------IHTKKRLVLVFEHLDQDLKKLLDVCEGGLES 99
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
T + +Q+ I H D ++HRD+K N+L + + + K+ADFGLA +
Sbjct: 100 VTAK-------SFLLQLLNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF 150
Query: 193 S-DESSMVQPAGTIGYLDPGYTNPS-KLSKKVDVFSYGVVLLEIIS 236
T+ Y P S K S +D++S G + E+++
Sbjct: 151 GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 35/226 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + IG+G++G VYKA +T KI K ++ EI +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR--------EISI 53
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG--SLYDLLHNAAAA 132
L L+ SN +V + + +LV E + L D+ +
Sbjct: 54 LKELKHSN-------IVKLYDV-------IHTKKRLVLVFEHLDQDLKKLLDVCEGGLES 99
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
T + +Q+ I H D ++HRD+K N+L + + + K+ADFGLA +
Sbjct: 100 VTAK-------SFLLQLLNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF 150
Query: 193 S-DESSMVQPAGTIGYLDPGYTNPS-KLSKKVDVFSYGVVLLEIIS 236
T+ Y P S K S +D++S G + E+++
Sbjct: 151 GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 23/117 (19%)
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF--DSKWDAK-----------LADFG 187
N + + QI+ + LH IIHRD+K NIL S++ A ++DFG
Sbjct: 134 NPISLLRQIASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 188 L-----AVSESDESSMVQPAGTIGYLDPGYTNPS---KLSKKVDVFSYGVVLLEIIS 236
L + ++ P+GT G+ P S +L++ +D+FS G V I+S
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 23/117 (19%)
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF--DSKWDAK-----------LADFG 187
N + + QI+ + LH IIHRD+K NIL S++ A ++DFG
Sbjct: 134 NPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 188 L-----AVSESDESSMVQPAGTIGYLDPGYTNPS---KLSKKVDVFSYGVVLLEIIS 236
L + ++ P+GT G+ P S +L++ +D+FS G V I+S
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 35/226 (15%)
Query: 15 ESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRV 74
E + IG+G++G VYKA + + A+K+ + +++ + IR
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA------QNNYGETFALKK-----IRLEKEDEGIPSTTIRE 50
Query: 75 LSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNG--SLYDLLHNAAAA 132
+S L+E N +V + + +LV E + L D+ +
Sbjct: 51 ISILKELKHSN----IVKLYDV-------IHTKKRLVLVFEHLDQDLKKLLDVCEGGLES 99
Query: 133 TTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAVSE 192
T + +Q+ I H D ++HRD+K N+L + + + K+ADFGLA +
Sbjct: 100 VTAK-------SFLLQLLNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF 150
Query: 193 S-DESSMVQPAGTIGYLDPGYTNPS-KLSKKVDVFSYGVVLLEIIS 236
T+ Y P S K S +D++S G + E+++
Sbjct: 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 89/225 (39%), Gaps = 26/225 (11%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
K + + LIGKGS G V KA Q KI+ K+A N ++ E
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI----------E 100
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+R+L + + + Y V RN + LV E M + +LYDLL N
Sbjct: 101 VRLLELMNKHDTEMKYYIVHLKRHFMFRN--------HLCLVFE-MLSYNLYDLLRNTNF 151
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF--DSKWDAKLADFGLA 189
L K A Q+ A+ L + IIH D+K NIL + K+ DFG +
Sbjct: 152 RGV-SLNLTR--KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS 208
Query: 190 VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEI 234
+ Q + Y P +D++S G +L+E+
Sbjct: 209 CQLGQR--IYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 145 IAMQISRAIQCLHENDPMIIHRDIKSTNILF----DSKWDAKLADFGLAVSESDESSMV- 199
+ I++ ++ LH ++HRD+K +NIL+ + ++ DFG A E+ ++
Sbjct: 121 VLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLX 178
Query: 200 QPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAARD 246
P T ++ P D++S GV+L ++ P D
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD 225
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 26/225 (11%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
K + + LIGKGS G V KA Q KI+ K+A N ++ E
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI----------E 100
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+R+L + + + Y V RN + LV E M + +LYDLL N
Sbjct: 101 VRLLELMNKHDTEMKYYIVHLKRHFMFRN--------HLCLVFE-MLSYNLYDLLRNTNF 151
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF-DSKWDA-KLADFGLA 189
+ K A Q+ A+ L + IIH D+K NIL + K A K+ DFG +
Sbjct: 152 RG---VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208
Query: 190 VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEI 234
+ Q + Y P +D++S G +L+E+
Sbjct: 209 CQLGQR--IYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 26/225 (11%)
Query: 12 KATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNE 71
K + + LIGKGS G V KA Q KI+ K+A N ++ E
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI----------E 81
Query: 72 IRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAAA 131
+R+L + + + Y V RN + LV E M + +LYDLL N
Sbjct: 82 VRLLELMNKHDTEMKYYIVHLKRHFMFRN--------HLCLVFE-MLSYNLYDLLRNTNF 132
Query: 132 ATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF-DSKWDA-KLADFGLA 189
+ K A Q+ A+ L + IIH D+K NIL + K A K+ DFG +
Sbjct: 133 RG---VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 189
Query: 190 VSESDESSMVQPAGTIGYLDPGYTNPSKLSKKVDVFSYGVVLLEI 234
+ Q + Y P +D++S G +L+E+
Sbjct: 190 CQLGQR--IYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 232
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 27/121 (22%)
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILF--DSKWDAK-----------LADFG 187
N + + QI+ + LH IIHRD+K NIL S++ A ++DFG
Sbjct: 116 NPISLLRQIASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 188 L-----AVSESDESSMVQPAGTIGYLDPGYTNPS-------KLSKKVDVFSYGVVLLEII 235
L + ++ P+GT G+ P S +L++ +D+FS G V I+
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 236 S 236
S
Sbjct: 234 S 234
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMV 199
+ + IA +I + LH+ND +IH D+ ++N +FD D + DFGL +S DE V
Sbjct: 432 DNLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLA-VSESDESSMV 199
+ + IA +I + LH+ND +IH D+ ++N +FD D + DFGL +S DE V
Sbjct: 427 DNLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 482
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 33/151 (21%)
Query: 112 LVMEFMPNGSLYDLLH-----NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHR 166
LV E M GS+ +H N A+ + ++ A+ LH I HR
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV----------VVQDVASALDFLHNKG--IAHR 135
Query: 167 DIKSTNILFDSK---WDAKLADFGLA--------VSESDESSMVQPAGTIGYLDPGYT-- 213
D+K NIL + K+ DFGL S ++ P G+ Y+ P
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 214 ---NPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S K+ D++S GV+L ++S P
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 143 VKIAMQISRAIQCLHENDPMIIHRDIKSTNILFD-----SKWDAKLADFG----LAVSES 193
+ + Q + + LH + I+HRD+K NIL K A ++DFG LAV
Sbjct: 121 ITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
Query: 194 DESSMVQPAGTIGYLDPGY------TNPSKLSKKVDVFSYGVVLLEIIS 236
S GT G++ P NP + VD+FS G V +IS
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLSEDCKENP---TYTVDIFSAGCVFYYVIS 224
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 118/255 (46%), Gaps = 32/255 (12%)
Query: 23 IGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQD--NSKKLNNEIRVLSSLQE 80
+G G +G V+ A+ D D ++ AIK+ VL D + K EI+++ L
Sbjct: 19 LGCGGNGLVFSAV----DNDCDKRV-AIKKI------VLTDPQSVKHALREIKIIRRLDH 67
Query: 81 SNKRNPNYCVVNFHGTSCRNS-GSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGW 139
N + ++ G+ + GS+ ++ +V E+M L ++L P L
Sbjct: 68 DNIVK-VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQG-----PLLEE 120
Query: 140 PNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK-WDAKLADFGLA----VSESD 194
R+ Q+ R ++ +H + ++HRD+K N+ +++ K+ DFGLA S
Sbjct: 121 HARL-FMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
Query: 195 ESSMVQPAGTIGYLDPG-YTNPSKLSKKVDVFSYGVVLLEIISCRKPIDAAR--DPASII 251
+ + + T Y P +P+ +K +D+++ G + E+++ + A + +I
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 252 DWALPLIKEEKLRQV 266
++P++ EE +++
Sbjct: 238 LESIPVVHEEDRQEL 252
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 106 GNSNKLLVMEFMPNGSLYDLLH------NAAAATTPQLGWPNR--VKIAMQISRAIQCLH 157
GN N L ++EF + + + L+ + A Q + R ++ ++ A+ LH
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH 128
Query: 158 ENDPMIIHRDIKSTNILFDSKWD---AKLADFGLAVSESDESS--------MVQPAGTIG 206
I HRD+K NIL +S K+ DF L +S + P G+
Sbjct: 129 TKG--IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 207 YLDPG----YTNPSKL-SKKVDVFSYGVVLLEIISCRKPI 241
Y+ P +T+ + K+ D++S GVVL ++S P
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 24/185 (12%)
Query: 11 VKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNN 70
V +++ LIG+GS+G VY A D T+ K +AIK+ + FE L D K++
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAY--DKNTE---KNVAIKKVNR-MFEDLID-CKRILR 74
Query: 71 EIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGSLYDLLHNAA 130
EI +L+ L+ +Y + + + D +L ++ + + L L
Sbjct: 75 EITILNRLKS------DYIIRLYDLIIPDDLLKFD----ELYIVLEIADSDLKKLFKTPI 124
Query: 131 AATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDAKLADFGLAV 190
T + I + +HE+ IIHRD+K N L + K+ DFGLA
Sbjct: 125 FLTEEHIK-----TILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
Query: 191 SESDE 195
+ + E
Sbjct: 178 TINSE 182
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 31/156 (19%)
Query: 42 DGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNS 101
D H IL + + N +E L+NEI+ L+ + V HG + ++
Sbjct: 270 DMPHGILTAEESQRNKYE--------LHNEIKFLTQ----PPAGFDAPAVLAHGENAQSG 317
Query: 102 GSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDP 161
LVME +P L D+L AA +R KI + R++ L +
Sbjct: 318 ---------WLVMEKLPGRLLSDML--AAGEEI------DREKILGSLLRSLAALEKQG- 359
Query: 162 MIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
H D++ N++ D++ A+L DFG V+ + S
Sbjct: 360 -FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 112 LVMEFMPNGSLYD----LLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRD 167
L++ F G+L++ L T Q+ W + + I R ++ +H HRD
Sbjct: 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEAIHAKG--YAHRD 159
Query: 168 IKSTNILFDSKWDAKLADFG------LAVSESDESSMVQPAG----TIGYLDP---GYTN 214
+K TNIL + L D G + V S ++ +Q TI Y P +
Sbjct: 160 LKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS 219
Query: 215 PSKLSKKVDVFSYGVVLLEIISCRKPID 242
+ ++ DV+S G VL ++ P D
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 31/156 (19%)
Query: 42 DGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNS 101
D H IL + + N +E L+NEI+ L+ + V HG + ++
Sbjct: 270 DMPHGILTAEESQRNKYE--------LHNEIKFLTQ----PPAGFDAPAVLAHGENAQSG 317
Query: 102 GSVDGNSNKLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDP 161
LVME +P L D+L AA +R KI + R++ L +
Sbjct: 318 ---------WLVMEKLPGRLLSDML--AAGEEI------DREKILGSLLRSLAALEKQG- 359
Query: 162 MIIHRDIKSTNILFDSKWDAKLADFGLAVSESDESS 197
H D++ N++ D++ A+L DFG V+ + S
Sbjct: 360 -FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 116/292 (39%), Gaps = 61/292 (20%)
Query: 2 AENFDYEELVKATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVL 61
EN ++ + +S + IG G V++ + E Q I AIK N E
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQ------IYAIKYV--NLEEAD 66
Query: 62 QDNSKKLNNEIRVLSSLQE-SNK--RNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMP 118
NEI L+ LQ+ S+K R +Y + + + G++D NS ++
Sbjct: 67 NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNS-------WLK 119
Query: 119 NGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSK 178
D + W N ++ A+ +H++ I+H D+K N L
Sbjct: 120 KKKSIDPWERKSY-------WKNMLE-------AVHTIHQHG--IVHSDLKPANFLIVDG 163
Query: 179 WDAKLADFGLAVS-ESDESSMVQPA--GTIGYLDPGYTNPSKLSKK-----------VDV 224
KL DFG+A + D +S+V+ + GT+ Y+ P S++ DV
Sbjct: 164 M-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 222
Query: 225 FSYGVVLLEIISCRKP----------IDAARDPASIIDWALPLIKEEKLRQV 266
+S G +L + + P + A DP I++ P I E+ L+ V
Sbjct: 223 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF--PDIPEKDLQDV 272
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 104 VDGNSNKLL--VMEFMPNGSLYDLLHN--AAAATTPQLGWPNRVKIAM-QISRAIQCLHE 158
V+ + NK L +ME++P+ +L+ +L + + + P N + I + Q+ RA+ +H
Sbjct: 105 VNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPM----NLISIYIYQLFRAVGFIHS 159
Query: 159 NDPMIIHRDIKSTNILFDSKWDA-KLADFGLAVSESDESSMVQPAGTIGYLDPGYT-NPS 216
I HRDIK N+L +SK + KL DFG A V + Y P +
Sbjct: 160 LG--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGAT 217
Query: 217 KLSKKVDVFSYGVVLLEII 235
+ + +D++S G V E+I
Sbjct: 218 EYTPSIDLWSIGCVFGELI 236
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 23/136 (16%)
Query: 62 QDNSKKLNNEIRVLSSLQESNKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFMPNGS 121
Q N +L+NEI+ L+ + V HG + ++ LVME +P
Sbjct: 282 QRNKHELHNEIKFLTQ----PPAGFDAPAVLAHGENAQSG---------WLVMEKLPGRL 328
Query: 122 LYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFDSKWDA 181
L D+L AA +R KI + R++ L + H D++ N++ D++ A
Sbjct: 329 LSDML--AAGEEI------DREKILGSLLRSLAALEKKG--FWHDDVRPWNVMVDARQHA 378
Query: 182 KLADFGLAVSESDESS 197
+L DFG V+ + S
Sbjct: 379 RLIDFGSIVTTPQDCS 394
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 33/151 (21%)
Query: 112 LVMEFMPNGSLYDLLH-----NAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHR 166
LV E M GS+ +H N A+ + ++ A+ LH I HR
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV----------VVQDVASALDFLHNKG--IAHR 135
Query: 167 DIKSTNILFDSK---WDAKLADFGLA--------VSESDESSMVQPAGTIGYLDPGYT-- 213
D+K NIL + K+ DF L S ++ P G+ Y+ P
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 214 ---NPSKLSKKVDVFSYGVVLLEIISCRKPI 241
S K+ D++S GV+L ++S P
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 26/224 (11%)
Query: 22 LIGKGSHGSVYKAILEDHQTDGDHKILAIKRASTNGFEVLQDNSKKLNNEIRVLSSLQES 81
L+G G GSVY I D+ +AIK + + +L N RV +
Sbjct: 15 LLGSGGFGSVYSGI-----RVSDNLPVAIKHVEKDRIS----DWGELPNGTRVPMEVVLL 65
Query: 82 NKRNPNYCVVNFHGTSCRNSGSVDGNSNKLLVMEFM-PNGSLYDLLHNAAAATTPQLGWP 140
K + + V R + + +L++E M P L+D + A +L
Sbjct: 66 KKVSSGFSGV------IRLLDWFERPDSFVLILERMEPVQDLFDFI-TERGALQEELA-- 116
Query: 141 NRVKIAMQISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMV 199
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D +
Sbjct: 117 --RSFFWQVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYT 171
Query: 200 QPAGTIGYLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
GT Y P + + + V+S G++L +++ P +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 109/274 (39%), Gaps = 41/274 (14%)
Query: 1 MAENFDYEELVK--ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIK-RASTNG 57
+AE F E++ A + + IG+G G +Y A + ++ G +K S NG
Sbjct: 19 LAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG 78
Query: 58 -------FEVLQDNSKKLNNEIRVLSSLQESNKRNPNYC-VVNFHGTSCRNSGSVDGNSN 109
F +++ IR R Y V + G+ + +G S
Sbjct: 79 PLFTELKFYQRAAKPEQIQKWIRT---------RKLKYLGVPKYWGSGLHDK---NGKSY 126
Query: 110 KLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+ ++M+ + L A + ++++++I ++ +HE++ +H DIK
Sbjct: 127 RFMIMDRFGSD-----LQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIK 179
Query: 170 STNILFDSKW--DAKLADFGLAV--------SESDESSMVQPAGTIGYLDPGYTNPSKLS 219
++N+L + K L D+GLA E E GTI + N S
Sbjct: 180 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPS 239
Query: 220 KKVDVFSYGVVLLEIISCRKPI-DAARDPASIID 252
++ D+ G +++ ++ P D +DP + D
Sbjct: 240 RRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 109/274 (39%), Gaps = 41/274 (14%)
Query: 1 MAENFDYEELVK--ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIK-RASTNG 57
+AE F E++ A + + IG+G G +Y A + ++ G +K S NG
Sbjct: 19 LAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG 78
Query: 58 -------FEVLQDNSKKLNNEIRVLSSLQESNKRNPNYC-VVNFHGTSCRNSGSVDGNSN 109
F +++ IR R Y V + G+ + +G S
Sbjct: 79 PLFTELKFYQRAAKPEQIQKWIRT---------RKLKYLGVPKYWGSGLHDK---NGKSY 126
Query: 110 KLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+ ++M+ + L A + ++++++I ++ +HE++ +H DIK
Sbjct: 127 RFMIMDRFGSD-----LQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIK 179
Query: 170 STNILFDSKW--DAKLADFGLAV--------SESDESSMVQPAGTIGYLDPGYTNPSKLS 219
++N+L + K L D+GLA E E GTI + N S
Sbjct: 180 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPS 239
Query: 220 KKVDVFSYGVVLLEIISCRKPI-DAARDPASIID 252
++ D+ G +++ ++ P D +DP + D
Sbjct: 240 RRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 118 QVLEAVR--HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 174
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 109/274 (39%), Gaps = 41/274 (14%)
Query: 1 MAENFDYEELVK--ATESFSQSRLIGKGSHGSVYKAILEDHQTDGDHKILAIK-RASTNG 57
+AE F E++ A ++ IG+G G +Y A + ++ G +K S NG
Sbjct: 19 LAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG 78
Query: 58 -------FEVLQDNSKKLNNEIRVLSSLQESNKRNPNYC-VVNFHGTSCRNSGSVDGNSN 109
F +++ IR R Y V + G+ + +G S
Sbjct: 79 PLFTELKFYQRAAKPEQIQKWIRT---------RKLKYLGVPKYWGSGLHDK---NGKSY 126
Query: 110 KLLVMEFMPNGSLYDLLHNAAAATTPQLGWPNRVKIAMQISRAIQCLHENDPMIIHRDIK 169
+ ++M+ + L A + ++++++I ++ +HE++ +H DIK
Sbjct: 127 RFMIMDRFGSD-----LQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIK 179
Query: 170 STNILFDSKW--DAKLADFGLAVSESDESSMVQPA--------GTIGYLDPGYTNPSKLS 219
++N+L + K L D+GLA E A GTI + N S
Sbjct: 180 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPS 239
Query: 220 KKVDVFSYGVVLLEIISCRKPI-DAARDPASIID 252
++ D+ G +++ ++ P D +DP + D
Sbjct: 240 RRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 163 IIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIGYLDPGYTNPSKL-SK 220
++HRDIK NIL D ++ + KL DFG D + GT Y P + + +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGR 236
Query: 221 KVDVFSYGVVLLEIISCRKPID 242
V+S G++L +++ P +
Sbjct: 237 SAAVWSLGILLYDMVCGDIPFE 258
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 150 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 206
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 170 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 226
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 151 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 207
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 150 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 206
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 118 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 174
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 165 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 221
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 121 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 177
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 165 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 221
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 150 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 206
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 150 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 206
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 148 QISRAIQCLHENDPMIIHRDIKSTNILFD-SKWDAKLADFGLAVSESDESSMVQPAGTIG 206
Q+ A++ H ++ ++HRDIK NIL D ++ + KL DFG D + GT
Sbjct: 151 QVLEAVR--HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 207
Query: 207 YLDPGYTNPSKL-SKKVDVFSYGVVLLEIISCRKPID 242
Y P + + + V+S G++L +++ P +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,737,464
Number of Sequences: 62578
Number of extensions: 414563
Number of successful extensions: 3106
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 1282
Number of HSP's gapped (non-prelim): 1085
length of query: 379
length of database: 14,973,337
effective HSP length: 100
effective length of query: 279
effective length of database: 8,715,537
effective search space: 2431634823
effective search space used: 2431634823
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)