BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035573
         (95 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P10349|PLSB_CUCMO Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucurbita
           moschata PE=1 SV=1
          Length = 396

 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 56/61 (91%)

Query: 14  VFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVD 73
           V +SGN +ADEIVLSNM VA DR+LLD+E+PF FSS+HK++REPFDYY+FGQNYIRPL+D
Sbjct: 77  VIESGNPKADEIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYYIFGQNYIRPLID 136

Query: 74  F 74
           F
Sbjct: 137 F 137


>sp|Q39639|PLSB_CUCSA Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucumis
           sativus PE=2 SV=1
          Length = 470

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 55/61 (90%)

Query: 14  VFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVD 73
           VF+SGN +ADEIVLSNM VA DR+LLD+E+PF FS +HK++REPFDYY FGQNY+RPL+D
Sbjct: 150 VFESGNPKADEIVLSNMTVALDRILLDVEDPFMFSPHHKAIREPFDYYTFGQNYVRPLID 209

Query: 74  F 74
           F
Sbjct: 210 F 210


>sp|P30706|PLSB_PEA Glycerol-3-phosphate acyltransferase, chloroplastic OS=Pisum
           sativum GN=GPAT PE=1 SV=1
          Length = 457

 Score =  100 bits (248), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/61 (67%), Positives = 51/61 (83%)

Query: 14  VFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVD 73
           V +SG+ +A+EIVLSNM    DR+ LD++EPF F ++HK+ REPFDYYMFGQNYIRPLVD
Sbjct: 137 VIKSGDPKANEIVLSNMTALLDRIFLDVKEPFVFEAHHKAKREPFDYYMFGQNYIRPLVD 196

Query: 74  F 74
           F
Sbjct: 197 F 197


>sp|Q43822|PLSB_PHAVU Glycerol-3-phosphate acyltransferase, chloroplastic OS=Phaseolus
           vulgaris GN=PLSB PE=2 SV=1
          Length = 461

 Score = 99.0 bits (245), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 51/64 (79%)

Query: 14  VFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVD 73
           V QSG+ +A+EIVLSNM    DRV LD+ +PF F  +HK+ REPFDYY+FGQNYIRPLVD
Sbjct: 141 VIQSGDPKANEIVLSNMIALLDRVFLDVTDPFVFQPHHKAKREPFDYYVFGQNYIRPLVD 200

Query: 74  FRLA 77
           F+ A
Sbjct: 201 FKNA 204


>sp|Q43307|PLSB_ARATH Glycerol-3-phosphate acyltransferase, chloroplastic OS=Arabidopsis
           thaliana GN=ATS1 PE=1 SV=2
          Length = 459

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 53/62 (85%)

Query: 14  VFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVD 73
           V  SG SRADE V+SNM+VAFDR+LL +E+P+TF+ YHK++REPFDYYMF   YIRPL+D
Sbjct: 139 VLSSGASRADETVVSNMSVAFDRMLLGVEDPYTFNPYHKAVREPFDYYMFVHTYIRPLID 198

Query: 74  FR 75
           F+
Sbjct: 199 FK 200


>sp|Q42713|PLSB_CARTI Glycerol-3-phosphate acyltransferase, chloroplastic OS=Carthamus
           tinctorius PE=2 SV=1
          Length = 463

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 52/62 (83%)

Query: 14  VFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVD 73
           V QS    A++IVLSNM VAFDR+ LD++EPF FS YH+++ EPF+YYMFGQNYIRPLV+
Sbjct: 139 VLQSAAPHAEDIVLSNMRVAFDRMFLDVKEPFEFSPYHEAILEPFNYYMFGQNYIRPLVN 198

Query: 74  FR 75
           FR
Sbjct: 199 FR 200


>sp|Q43869|PLSB_SPIOL Glycerol-3-phosphate acyltransferase, chloroplastic OS=Spinacia
           oleracea GN=GAT PE=1 SV=1
          Length = 472

 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 49/61 (80%)

Query: 14  VFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVD 73
           V  SG S ADEIVLSNM+V  D VLLDIE+PF F  +HK++REP DYY FGQ+YIRPLVD
Sbjct: 151 VLSSGISHADEIVLSNMSVMLDFVLLDIEDPFVFPPFHKAIREPADYYSFGQDYIRPLVD 210

Query: 74  F 74
           F
Sbjct: 211 F 211


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.328    0.140    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,756,440
Number of Sequences: 539616
Number of extensions: 1224233
Number of successful extensions: 2602
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2593
Number of HSP's gapped (non-prelim): 10
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)