BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035574
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SX38|DRL4_ARATH Putative disease resistance protein At1g50180 OS=Arabidopsis
thaliana GN=At1g50180 PE=3 SV=2
Length = 857
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWI 51
+E+L++ L+ G +L V +I GL KT + ++ ++ +FD AW+
Sbjct: 171 LEKLVNDLVSGGEKLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAWV 221
>sp|Q4JBP0|SYL1_SULAC Leucine--tRNA ligase 1 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=leuS1 PE=3 SV=1
Length = 942
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 59 PDQILDIVAVILLPFSMFKILPDNQNGSRVLITLTQIKMVTSFQLEDRENIRLDLVPTGG 118
P+ I VA+++ P S + I+ DN+NG R++++ K + SFQ+ E R GG
Sbjct: 222 PETIFGAVAILINPDSDYSIVVDNKNGKRLVMSTEAFKKL-SFQMSLTEEER----KKGG 276
Query: 119 PL 120
L
Sbjct: 277 EL 278
>sp|Q9M667|RPP13_ARATH Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13
PE=2 SV=2
Length = 835
Score = 33.9 bits (76), Expect = 0.39, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWIPAPYHYDPD 60
+E+LLD E + +++I GL KTA + YNS +K F+Y AW Y
Sbjct: 174 LEKLLDY--EEKNRF-IISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVSQEYKTG 230
Query: 61 QIL 63
IL
Sbjct: 231 DIL 233
>sp|Q8W3K3|DRL8_ARATH Putative disease resistance protein At1g58400 OS=Arabidopsis
thaliana GN=At1g58400 PE=3 SV=1
Length = 910
Score = 33.9 bits (76), Expect = 0.44, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWI 51
+++L+ L+E + +V++ GL KT + +N +KH FD LAW+
Sbjct: 171 VKKLVGYLVE-EDDIQIVSVTGMGGLGKTTLARQVFNHEDVKHQFDRLAWV 220
>sp|P37124|C77A2_SOLME Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1
Length = 511
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 54 PYHYDPDQ---------ILDIVAVILLPFSMFKILPDNQNGSRVLITLTQIKMVTSFQLE 104
P +DPD+ I + V ++PF M + + N + V ++L ++V F+
Sbjct: 421 PEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWA 480
Query: 105 DRENIRLDL 113
D EN R+D
Sbjct: 481 DPENTRVDF 489
>sp|Q8W474|DRL7_ARATH Probable disease resistance protein At1g58390 OS=Arabidopsis
thaliana GN=At1g58390 PE=2 SV=4
Length = 907
Score = 33.9 bits (76), Expect = 0.47, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 15 LSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWI 51
+ VV+I GL KT + +N +KH FD LAW+
Sbjct: 183 VQVVSITGMGGLGKTTLARQVFNHEDVKHQFDRLAWV 219
>sp|Q38834|R13L4_ARATH Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana
GN=RPP13L4 PE=2 SV=2
Length = 852
Score = 33.1 bits (74), Expect = 0.77, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 13 TQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWIPAPYHYDPDQIL 63
+QL ++A + GL KT E +N ++H F+ W+ + +QI+
Sbjct: 180 SQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIM 230
>sp|P0DI16|DRL44_ARATH Probable disease resistance protein RDL5 OS=Arabidopsis thaliana
GN=RDL5 PE=1 SV=1
Length = 1017
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWI 51
+++L+ L++ + VV+I GL KT + +N +KH FD L+W+
Sbjct: 170 VKKLVGYLVD-EANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWV 219
>sp|F4IBE4|DRL10_ARATH Probable disease resistance protein RF45 OS=Arabidopsis thaliana
GN=RF45 PE=1 SV=1
Length = 1017
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWI 51
+++L+ L++ + VV+I GL KT + +N +KH FD L+W+
Sbjct: 170 VKKLVGYLVD-EANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWV 219
>sp|P0DI18|DRL45_ARATH Probable disease resistance protein RDL6 OS=Arabidopsis thaliana
GN=RDL6 PE=2 SV=1
Length = 1049
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWI 51
+++L+ L++ + VV+I GL KT + +N +KH FD L+W+
Sbjct: 170 VKKLVGYLVD-EANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWV 219
>sp|P0DI17|DRL11_ARATH Probable disease resistance protein RF9 OS=Arabidopsis thaliana
GN=RF9 PE=2 SV=1
Length = 1049
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWI 51
+++L+ L++ + VV+I GL KT + +N +KH FD L+W+
Sbjct: 170 VKKLVGYLVD-EANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWV 219
>sp|Q9STE7|R13L3_ARATH Putative disease resistance RPP13-like protein 3 OS=Arabidopsis
thaliana GN=RPP13L3 PE=3 SV=1
Length = 847
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 17 VVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWIPAPYHYDPDQIL 63
+++I GL KTA + YNS +K FD AW Y IL
Sbjct: 187 IISIFGMGGLGKTALARKLYNSGDVKRRFDCRAWTYVSQEYKTRDIL 233
>sp|P0C8S1|RP8L2_ARATH Probable disease resistance RPP8-like protein 2 OS=Arabidopsis
thaliana GN=RPP8L2 PE=1 SV=1
Length = 906
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWI 51
+EEL+D L+E + + VV++ G+ KT + ++ ++ +FD +W+
Sbjct: 170 VEELVDHLVENDS-VQVVSVSGMGGIGKTTLARQVFHHDIVRRHFDGFSWV 219
>sp|Q9STE5|R13L2_ARATH Putative disease resistance RPP13-like protein 2 OS=Arabidopsis
thaliana GN=RPP13L2 PE=3 SV=1
Length = 847
Score = 31.2 bits (69), Expect = 2.7, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 1 MEELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAW 50
+ +LLD +G ++ +++I GL KT+ + +NSS +K F+Y W
Sbjct: 172 LTKLLD--DDGDNKIYMISIFGMEGLGKTSLARKLFNSSDVKESFEYRVW 219
>sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1
PE=1 SV=1
Length = 926
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 3 ELLDLLIEGPTQLSVVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLAWIPAPYHY 57
+L+ L+ Q VVA++ G KT +A + S ++ +F+ AW+ Y
Sbjct: 181 KLIGRLLSPEPQRIVVAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVTISKSY 235
>sp|B5Z8R2|NUOH_HELPG NADH-quinone oxidoreductase subunit H OS=Helicobacter pylori
(strain G27) GN=nuoH PE=3 SV=1
Length = 329
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 17 VVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLA-WIPAPY-HYDPDQILDIVAVILLPFS 74
V++I+ G + F +F +L+ W+ A Y H PDQ++D+ I+LP +
Sbjct: 257 VISIVFFGGFNAWGFIPGGLAILIKAGFFVFLSMWVRATYPHVRPDQLMDMCWKIMLPLA 316
Query: 75 MFKIL 79
+ I+
Sbjct: 317 LLNIV 321
>sp|O25857|NUOH_HELPY NADH-quinone oxidoreductase subunit H OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=nuoH PE=3 SV=1
Length = 329
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 17 VVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLA-WIPAPY-HYDPDQILDIVAVILLPFS 74
V++I+ G + F +F +L+ W+ A Y H PDQ++D+ I+LP +
Sbjct: 257 VISIVFFGGFNAWGFIPGGIAILIKAGFFVFLSMWVRATYPHVRPDQLMDMCWKIMLPLA 316
Query: 75 MFKIL 79
+ I+
Sbjct: 317 LLNIV 321
>sp|B6JNA7|NUOH_HELP2 NADH-quinone oxidoreductase subunit H OS=Helicobacter pylori
(strain P12) GN=nuoH PE=3 SV=1
Length = 329
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 17 VVAILDSIGLDKTAFTAEAYNSSYMKHYFDYLA-WIPAPY-HYDPDQILDIVAVILLPFS 74
V++I+ G + F +F +L+ W+ A Y H PDQ++D+ I+LP +
Sbjct: 257 VISIVFFGGFNAWGFIPGGIAILIKAGFFVFLSMWVRATYPHVRPDQLMDMCWKIMLPLA 316
Query: 75 MFKIL 79
+ I+
Sbjct: 317 LLNIV 321
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.141 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,352,701
Number of Sequences: 539616
Number of extensions: 2385244
Number of successful extensions: 4744
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4722
Number of HSP's gapped (non-prelim): 32
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)