BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035575
         (132 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A4FVI0|ZSWM7_DANRE Zinc finger SWIM domain-containing protein 7 OS=Danio rerio
           GN=zswim7 PE=2 SV=2
          Length = 140

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 8/130 (6%)

Query: 7   VAESVWKSIESTRS----VTEDQLSILHFLFGKNIERATRIVDQRGVRRISGEPSGRSIF 62
           VAE + K ++ T S    + +D L  L F+FG    +A  +VDQ  V  +S  PSGR  F
Sbjct: 8   VAEQLLKDLQRTYSEIKQIPDDLLIALRFVFGPCALQALDLVDQHSVTCVSS-PSGRKAF 66

Query: 63  KVVGESRRKEEYLCFAE-NYCACYSFFYDIVNKGEQLCCKHQLAARLASALGACVEVNVS 121
           +V+G S R   Y CF   +YC C +F + ++ + E L CKH LA  L+ A+G C +  VS
Sbjct: 67  QVLGGSGRL--YTCFTSCHYCPCPAFSFTVLRRNESLMCKHLLAVILSQAMGLCQQEQVS 124

Query: 122 DEQLALLLAK 131
           D+Q+  +L++
Sbjct: 125 DQQMTHILSR 134


>sp|Q19AV6|ZSWM7_HUMAN Zinc finger SWIM domain-containing protein 7 OS=Homo sapiens
           GN=ZSWIM7 PE=1 SV=1
          Length = 140

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 5/125 (4%)

Query: 6   LVAESVWKSIESTRSVTEDQLSILHFLFGKNIERATRIVDQRGVRRISGEPSGRSIFKVV 65
           L++E      ES R + ++ L  L FLFG +  +A  +VD++ +  IS  PSGR +++V+
Sbjct: 12  LLSEMAAAVQESAR-IPDEYLLSLKFLFGSSATQALDLVDRQSITLISS-PSGRRVYQVL 69

Query: 66  GESRRKEEYLCFAE-NYCACYSFFYDIVNKGEQLCCKHQLAARLASALGACVEVNVSDEQ 124
           G S +   Y C A  +YC+C +F + ++ K + + CKH LA  L+  +  C +++VSD+Q
Sbjct: 70  GSSSKT--YTCLASCHYCSCPAFAFSVLRKSDSILCKHLLAVYLSQVMRTCQQLSVSDKQ 127

Query: 125 LALLL 129
           L  +L
Sbjct: 128 LTDIL 132


>sp|Q9CWQ2|ZSWM7_MOUSE Zinc finger SWIM domain-containing protein 7 OS=Mus musculus
           GN=Zswim7 PE=2 SV=1
          Length = 152

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 4/117 (3%)

Query: 14  SIESTRSVTEDQLSILHFLFGKNIERATRIVDQRGVRRISGEPSGRSIFKVVGESRRKEE 73
           ++  +  + ++ L  L F+FG +  +A  +VD+  V  IS  PSGR +++V+G S +   
Sbjct: 19  AVRDSARIPDELLLSLEFVFGSSAIQALDLVDRESVTLISS-PSGRRVYQVLGSSGKT-- 75

Query: 74  YLCFAE-NYCACYSFFYDIVNKGEQLCCKHQLAARLASALGACVEVNVSDEQLALLL 129
           Y C A  +YC+C +F + ++ K + L CKH LA  L+  L  C +++VSD+QL  LL
Sbjct: 76  YTCLASCHYCSCPAFSFSVLRKSDSLLCKHLLAIYLSQLLRNCQQLHVSDKQLTDLL 132


>sp|Q55FI7|ZSWM7_DICDI Zinc finger SWIM domain-containing protein 7 homolog
           OS=Dictyostelium discoideum GN=zswim7 PE=3 SV=1
          Length = 156

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 66/114 (57%), Gaps = 5/114 (4%)

Query: 18  TRSVTEDQLSILHFLFGKNIERATRIVDQRGVRRISGEPSGRSIFKVVGESRRKEEYLCF 77
           T +++E+ L  L+++F + I  +  ++D+  + +   +PS R  +  V E R+  +Y+C 
Sbjct: 28  TNTISEETLLSLYYIFDQTIFASLELIDKELITKYVFQPSNRYFY--VVEGRKGAKYMCL 85

Query: 78  AE-NYCACYSFFYDIVNKGEQLCCKHQLAARLASALG--ACVEVNVSDEQLALL 128
            + +YC+C SF + ++ K + + CKHQ+++ LA  +     +E + S+ Q  +L
Sbjct: 86  IQGDYCSCPSFNFSVLLKSDSVYCKHQISSILAEIISNVKVIEFDDSEYQSQIL 139


>sp|Q183P3|RUVC_CLOD6 Crossover junction endodeoxyribonuclease RuvC OS=Clostridium
           difficile (strain 630) GN=ruvC PE=3 SV=1
          Length = 169

 Score = 29.6 bits (65), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 9   ESVWKSIES-TRSVTEDQLSILHFLFGKNIERATRIVDQRGVRRISGEPSGRSIF 62
           E V+K I++  ++   D++ +    F KN++ A  +   RGV  ++   +G+ ++
Sbjct: 46  ELVYKGIDTIVKNYNIDEVGMEELFFNKNVKTAITVAQARGVTMLACAHNGKPVY 100


>sp|P73997|AROB_SYNY3 3-dehydroquinate synthase OS=Synechocystis sp. (strain PCC 6803 /
           Kazusa) GN=aroB PE=3 SV=1
          Length = 361

 Score = 29.6 bits (65), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 89  YDIVNKGEQLCCKHQLAARLASALGACVEVNVSDEQLALLL 129
           Y ++N GE +    + AA++A  LG C + ++ D Q  LLL
Sbjct: 263 YGVINHGEAVAIGMEAAAKIAHYLGLC-DQSLGDRQRQLLL 302


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.133    0.384 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,668,803
Number of Sequences: 539616
Number of extensions: 1503736
Number of successful extensions: 3997
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3986
Number of HSP's gapped (non-prelim): 7
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)