BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035578
(377 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 184/334 (55%), Gaps = 38/334 (11%)
Query: 41 LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN 100
++L +Y CP+A VRS + Q D ++ A+L+RL FHDCF+ GCDAS+ LDD+
Sbjct: 1 MQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG 60
Query: 101 GNESHPIERQAIPS-QTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPY 159
+S E+ A P+ + +GF+ ++ IK LE ACPG+VSC+D LALA+ + LAGGP
Sbjct: 61 SIQS---EKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPS 117
Query: 160 YPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISC 219
+ V GRRDS+ + A + IP P + L+ I FS G + + V+L GAH G+ C
Sbjct: 118 WTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARC 177
Query: 220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLC-GDGNQTSLHGXXXXXXXXXXXXXXGMR 278
NRL++F GTG PDPT++ L ++ LC +G+ +++
Sbjct: 178 GVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTIT------------------ 219
Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAE--EKTAKLVWAYAS 336
+ +S+ FD +Y+ NL GLL +DQ+L + T +V ++AS
Sbjct: 220 ------------NLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFAS 267
Query: 337 DCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+ T + FA+ M+ M N+ L+GS G++R +C
Sbjct: 268 N-QTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 300
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 178/329 (54%), Gaps = 41/329 (12%)
Query: 43 LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGN 102
L ++Y KCP+A T++S + +++ ++ A+LLRL FHDCF+ GCDASV LDD+
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDT--- 58
Query: 103 ESHPIERQAIP-SQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYP 161
+ E+ A P + +++GF+ I+ IK ++E CPG+VSCAD LA+A RD ++ GG +
Sbjct: 59 SNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWN 118
Query: 162 VFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQF 221
V GRRDS + A +++P P +L+ ++ FS +GF+ +E V+L GAH IG+ C
Sbjct: 119 VLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTA 178
Query: 222 IRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGXXXXXXXXXXXXXXGMREST 281
R R+Y+ DPT + + GD N +
Sbjct: 179 FRTRIYN---ESNIDPTYAKSLQANCPSVGGDTNLSPFD--------------------- 214
Query: 282 LGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTA 341
+++ FD YY NL +GLLH+DQQL T V AY+++ T
Sbjct: 215 ------------VTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAAT- 261
Query: 342 YRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+ TDF M+KM NL L+G+ GQ+RTNC
Sbjct: 262 FNTDFGNAMIKMGNLSPLTGTSGQIRTNC 290
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 179/331 (54%), Gaps = 36/331 (10%)
Query: 43 LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGN 102
L +Y CP+A VR+ + Q + D ++ A+L+RL FHDCF++GCDAS+ LD+S
Sbjct: 4 LNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSG-- 61
Query: 103 ESHPIERQAIP-SQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYP 161
S E+ A P + + +GF+ ++ IK LE ACPG+VSC D LALA++ + L+GGP +
Sbjct: 62 -SIISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWT 120
Query: 162 VFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQF 221
V GRRD++ + A + IP P L+ I FS G + + V+L GAH G+ +C
Sbjct: 121 VDLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGV 180
Query: 222 IRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGXXXXXXXXXXXXXXGMREST 281
NRL++F G G PDPT++ L ++ LC G +
Sbjct: 181 FSNRLFNFSGKGNPDPTLNTTLLSTLQELC-------------------PQKGRGSGSTN 221
Query: 282 LGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTA--KLVWAYASDCG 339
L +S+ FD +Y+ NL GLL +DQ+L + +A +V ++AS+
Sbjct: 222 L----------DLSTPDAFDNNYFTNLQSNNGLLQSDQELFSTTGSATIAIVTSFASN-Q 270
Query: 340 TAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
T + FA+ M+ M N+ L+GS G++R +C
Sbjct: 271 TLFFQAFAQSMINMGNISPLTGSSGEIRLDC 301
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 176/334 (52%), Gaps = 44/334 (13%)
Query: 42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
+L D Y CP+ + VR ++A + ++ A+L+RL FHDCF+ GCDAS+ LD ++
Sbjct: 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS 60
Query: 102 NESHPIERQAIPS-QTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
E+ AIP+ + +GF+ I+ IK +E ACPG+VSCAD L LA RD ++L+GGP +
Sbjct: 61 ------EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGW 114
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
V GR+D + + Q + +P P + L+ I+ F + + V+L GAH G+ C
Sbjct: 115 RVALGRKDGLVAN-QNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCA 173
Query: 221 FIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGXXXXXXXXXXXXXXGMRES 280
NRL++F G G PD T+ L ++ +C
Sbjct: 174 VFSNRLFNFTGAGNPDATLETSLLSNLQTVC----------------------------- 204
Query: 281 TLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQL----MAEEKTAKLVWAYAS 336
LG N S+ FD +Y++NLL G+GLL +DQ L +A T KLV AY+
Sbjct: 205 PLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSR 264
Query: 337 DCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+R DF M++M N+ +G+ G+VRTNC
Sbjct: 265 SQSLFFR-DFTCAMIRMGNIS--NGASGEVRTNC 295
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 177/336 (52%), Gaps = 40/336 (11%)
Query: 41 LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN 100
++L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 MQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT- 59
Query: 101 GNESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPY 159
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP
Sbjct: 60 --TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS 117
Query: 160 YPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKIS 218
+ V GRRDS++++ A A +PGP L ++ F G + + V+L G H GK
Sbjct: 118 WRVPLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQ 177
Query: 219 CQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGM 277
C+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +
Sbjct: 178 CRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDL 224
Query: 278 RESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAY 334
R T+ FD YY NL +GL+ +DQ+L + T LV ++
Sbjct: 225 RTPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSF 267
Query: 335 ASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
A+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 ANSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 302
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 171/331 (51%), Gaps = 32/331 (9%)
Query: 43 LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGN 102
L+ +Y CP AE V+ +A ++ + + L+R+ FHDCF+ GCDASV LD + N
Sbjct: 2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 103 ESHPIERQAIPSQ-TLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYP 161
+ E+ AIP+ +L+GF+ I K +E ACP VSCAD LA A RD LAG Y
Sbjct: 62 TA---EKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQ 118
Query: 162 VFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQF 221
V +GRRD S EA A+IP P + ++++ F+ + + E V+L GAH+IG C
Sbjct: 119 VPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSS 178
Query: 222 IRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGXXXXXXXXXXXXXXGMREST 281
NRLY+F DPT+S + +R C N T
Sbjct: 179 FTNRLYNFNSGSGIDPTLSPSYAALLRNTC-PANSTRFTPIT------------------ 219
Query: 282 LGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASDCGTA 341
+S I + + D YY + GLL +DQ L+ E + V A A + TA
Sbjct: 220 --------VSLDIITPSVLDNMYYTGVQLTLGLLTSDQALVTEANLSAAVKANAMNL-TA 270
Query: 342 YRTDFARVMLKMSNLGVLSGSQGQVRTNCSL 372
+ + FA+ M+KM + VL+G+QG++RTNCS+
Sbjct: 271 WASKFAQAMVKMGQIEVLTGTQGEIRTNCSV 301
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 176/336 (52%), Gaps = 40/336 (11%)
Query: 41 LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN 100
++L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 MQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT- 59
Query: 101 GNESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPY 159
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP
Sbjct: 60 --TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS 117
Query: 160 YPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKIS 218
+ V GRRDS++++ A A +P P L ++ F G + + V+L G H GK
Sbjct: 118 WRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQ 177
Query: 219 CQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGM 277
C+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +
Sbjct: 178 CRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDMDL 224
Query: 278 RESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAY 334
R T+ FD YY NL +GL+ +DQ+L + T LV ++
Sbjct: 225 RTPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSF 267
Query: 335 ASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
A+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 ANSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 302
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 176/336 (52%), Gaps = 40/336 (11%)
Query: 41 LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN 100
++L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 MQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT- 59
Query: 101 GNESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPY 159
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP
Sbjct: 60 --TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS 117
Query: 160 YPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKIS 218
+ V GRRDS++++ A A +P P L ++ F G + + V+L G H GK
Sbjct: 118 WRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQ 177
Query: 219 CQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGM 277
C+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +
Sbjct: 178 CRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDL 224
Query: 278 RESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAY 334
R T+ FD YY NL +GL+ +DQ+L + T LV ++
Sbjct: 225 RTPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSF 267
Query: 335 ASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
A+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 ANSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 302
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 175/335 (52%), Gaps = 40/335 (11%)
Query: 42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
+L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 102 NESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP +
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKISC 219
V GRRDS++++ A A +P P L ++ F G + + V+L G H GK C
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQC 177
Query: 220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGMR 278
+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +R
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDLR 224
Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAYA 335
T+ FD YY NL +GL+ +DQ+L + T LV ++A
Sbjct: 225 TPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFA 267
Query: 336 SDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 NSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 301
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 176/335 (52%), Gaps = 40/335 (11%)
Query: 42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
+L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 102 NESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP +
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKISC 219
V GRRDS++++ A A +P P L ++ F G + + V+L G H+ GK C
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQC 177
Query: 220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGMR 278
+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +R
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDLR 224
Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAYA 335
T+ FD YY NL +GL+ +DQ+L + T LV ++A
Sbjct: 225 TPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFA 267
Query: 336 SDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 NSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 301
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 175/335 (52%), Gaps = 40/335 (11%)
Query: 42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
+L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 102 NESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP +
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKISC 219
V GRRDS++++ A A +P P L ++ F G + + V+L G H GK C
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 177
Query: 220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGMR 278
+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +R
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDLR 224
Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAYA 335
T+ FD YY NL +GL+ +DQ+L + T LV ++A
Sbjct: 225 TPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFA 267
Query: 336 SDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 NSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 301
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 176/336 (52%), Gaps = 40/336 (11%)
Query: 41 LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN 100
++L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 MQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT- 59
Query: 101 GNESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPY 159
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP
Sbjct: 60 --TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS 117
Query: 160 YPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKIS 218
+ V GRRDS++++ A A +P P L ++ F G + + V+L G H GK
Sbjct: 118 WRVPLGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQ 177
Query: 219 CQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGM 277
C+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +
Sbjct: 178 CRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDL 224
Query: 278 RESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAY 334
R T+ FD YY NL +GL+ +DQ+L + T LV ++
Sbjct: 225 RTPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSF 267
Query: 335 ASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
A+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 ANSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 302
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 175/335 (52%), Gaps = 40/335 (11%)
Query: 42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
+L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 102 NESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP +
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKISC 219
V GRRDS++++ A A +P P L ++ F G + + V+L G H GK C
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 177
Query: 220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGMR 278
+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +R
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDLR 224
Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAYA 335
T+ FD YY NL +GL+ +DQ+L + T LV ++A
Sbjct: 225 TPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFA 267
Query: 336 SDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 NSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 301
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 175/335 (52%), Gaps = 40/335 (11%)
Query: 42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
+L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT-- 58
Query: 102 NESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP +
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKISC 219
V GRRDS++++ A A +P P L ++ F G + + V+L G H GK C
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 177
Query: 220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGMR 278
+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +R
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDLR 224
Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAYA 335
T+ FD YY NL +GL+ +DQ+L + T LV ++A
Sbjct: 225 TPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFA 267
Query: 336 SDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 NSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 301
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 175/336 (52%), Gaps = 40/336 (11%)
Query: 41 LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN 100
++L +Y + CP+ VR + D ++ A++LRL F DCF+ GCDAS+ LD++
Sbjct: 1 MQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNT- 59
Query: 101 GNESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPY 159
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP
Sbjct: 60 --TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS 117
Query: 160 YPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKIS 218
+ V GRRDS++++ A A +P P L ++ F G + + V+L G H GK
Sbjct: 118 WRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQ 177
Query: 219 CQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGM 277
C+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +
Sbjct: 178 CRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDL 224
Query: 278 RESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAY 334
R T+ FD YY NL +GL+ +DQ+L + T LV ++
Sbjct: 225 RTPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSF 267
Query: 335 ASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
A+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 ANSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 302
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 175/336 (52%), Gaps = 40/336 (11%)
Query: 41 LRLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN 100
++L +Y + CP+ VR + D ++ A++LRL FHDCF+ GCDAS+ LD++
Sbjct: 1 MQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT- 59
Query: 101 GNESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPY 159
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP
Sbjct: 60 --TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPS 117
Query: 160 YPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKIS 218
+ V GRRDS++++ A A +P P L ++ F G + + V+L G H GK
Sbjct: 118 WRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQ 177
Query: 219 CQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGM 277
C+ I +RLY+F TG PDPT++ +L +R LC +GN ++L +
Sbjct: 178 CRSIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDL 224
Query: 278 RESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAY 334
R T+ FD YY NL +GL+ +DQ+L + T LV ++
Sbjct: 225 RTPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSF 267
Query: 335 ASDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
A+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 ANSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 302
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 173/335 (51%), Gaps = 40/335 (11%)
Query: 42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
+L +Y + CP+ VR + D ++ A++L L F DCF+ GCDAS+ LD++
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNT-- 58
Query: 102 NESHPIERQAI-PSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
S E+ A + + +GF I+ +K +E ACP VSCAD L +A + + LAGGP +
Sbjct: 59 -TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSW 117
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFS-PRETVSLIGAHNIGKISC 219
V GRRDS++++ A A +P P L ++ F G + + V+L G H GK C
Sbjct: 118 RVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQC 177
Query: 220 QFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCG-DGNQTSLHGXXXXXXXXXXXXXXGMR 278
+FI +RLY+F TG PDPT++ +L +R LC +GN ++L +R
Sbjct: 178 RFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSAL-------------VDFDLR 224
Query: 279 ESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEK---TAKLVWAYA 335
T+ FD YY NL +GL+ +DQ+L + T LV ++A
Sbjct: 225 TPTI-----------------FDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFA 267
Query: 336 SDCGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNC 370
+ T + F M +M N+ L+G+QGQ+R NC
Sbjct: 268 NSTQTFFNA-FVEAMDRMGNITPLTGTQGQIRLNC 301
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 180/334 (53%), Gaps = 36/334 (10%)
Query: 42 RLEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNG 101
+L +YR+ CP+ V + D ++ A+L+RL FHDCF+ GCD SV L++++
Sbjct: 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60
Query: 102 NESHPIERQAIPS-QTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
ES E+ A+P+ +++G D +N IK +E +CP VSCAD LA+A +L GGP +
Sbjct: 61 IES---EQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGW 117
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
PV GRRDS+ + A +P P +L ++ F+++G + + V+L G H G+ C
Sbjct: 118 PVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCS 177
Query: 221 FIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGXXXXXXXXXXXXXXGMRES 280
NRLY+F TG PDPT++ +L +R C ++
Sbjct: 178 TFINRLYNFSNTGNPDPTLNTTYLEVLRARC--------------------------PQN 211
Query: 281 TLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAE--EKTAKLVWAYASDC 338
G N + +S+ FD YY NLL+ GLL +DQ+L + T +V +++S+
Sbjct: 212 ATGDNLT---NLDLSTPDQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQ 268
Query: 339 GTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSL 372
T + ++F M+KM N+GVL+G +G++R C+
Sbjct: 269 NTFF-SNFRVSMIKMGNIGVLTGDEGEIRLQCNF 301
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 165/335 (49%), Gaps = 45/335 (13%)
Query: 43 LEYDYYRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGN 102
L +D+Y CP AE VR + + +D + A LLRL FHDCF+ GCDASV LD G+
Sbjct: 9 LSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLD---GS 65
Query: 103 ESHPIERQAIPSQTLK--GFDKINLIKEELEEACPG-MVSCADALALATRDGILLAGGPY 159
+ P E+QA P+ TL+ F +N I++ LE C G +VSC+D LALA RD ++++GGP
Sbjct: 66 ATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPD 125
Query: 160 YPVFTGRRDSIRSY--FQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKI 217
Y V GRRDS RS+ Q+ +++PGP ++ +L L G + V++ G H IG
Sbjct: 126 YRVPLGRRDS-RSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLA 184
Query: 218 SCQFIRNRLYDFLGTGQPDPTMSDDFLVEMRVLCGDGNQTSLHGXXXXXXXXXXXXXXGM 277
C +RL+ +PDPT+S FL ++ C
Sbjct: 185 HCSSFEDRLFP-----RPDPTISPTFLSRLKRTCP------------------------- 214
Query: 278 RESTLGMNYYQRLSTSISSGAGFDAHYYQNLLRGRGLLHADQQLMAEEKTAKLVWAYASD 337
+R + + FD YY +L+ GL +DQ L T +V +A
Sbjct: 215 -----AKGTDRRTVLDVRTPNVFDNKYYIDLVNREGLFVSDQDLFTNAITRPIVERFAQS 269
Query: 338 CGTAYRTDFARVMLKMSNLGVLSGSQGQVRTNCSL 372
+ F + KM + V + QG+VR NCS+
Sbjct: 270 -QQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCSV 303
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 57 KTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQT 116
+ +R+ + + S+ ++ +L+RL +H+ C F D + N + +
Sbjct: 10 RALRADIEDMISEKLELGPSLIRLAWHEAASYDC----FKKDGSPNSASMRFKPECLYAG 65
Query: 117 LKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQE 176
KG D E L++ P +S AD LA I GGP P GR D+
Sbjct: 66 NKGLDIPRKALETLKKKYP-QISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCG 124
Query: 177 ATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQF 221
+P + + +F GF+ +ETV+LIGAH G+ +F
Sbjct: 125 PDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGETHIEF 169
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 57 KTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQT 116
+ +R+ + + S+ ++ +L+RL +H+ C F D + N + +
Sbjct: 10 RALRADIEDMISEKLELGPSLIRLAWHEAASYDC----FKKDGSPNSASMRFKPECLYAG 65
Query: 117 LKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQE 176
KG D E L++ P +S AD LA I GGP P GR D+
Sbjct: 66 NKGLDIPRKALETLKKKYP-QISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCG 124
Query: 177 ATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQF 221
+P + + +F GF+ +ETV+LIGAH G+ +F
Sbjct: 125 PDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEF 169
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 57 KTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQT 116
+ +R+ + + S+ ++ +L+RL +H+ C F D + N + +
Sbjct: 9 RALRADIEDMISEKLELGPSLIRLAWHEAASYDC----FKKDGSPNSASMRFKPECLYAG 64
Query: 117 LKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQE 176
KG D E L++ P +S AD LA I GGP P GR D+
Sbjct: 65 NKGLDIPRKALETLKKKYP-QISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCG 123
Query: 177 ATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIGKISCQF 221
+P + + +F GF+ +ETV+LIGAH G+ +F
Sbjct: 124 PDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEF 168
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +PGP D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPGPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSIA 172
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +PGP D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPGPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSIA 172
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +PGP D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPGPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNI 214
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSI 171
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 77 LLRLFFHDCFIMGCDASVFLDDSNGNESHPIERQAIPSQTLKGFDKINLIKEELEEACPG 136
++RL +HD + + N S + + + +NL+K +++ G
Sbjct: 28 MVRLGWHDAGTYNKNIEEWPQRGGANGSLRFDVELKHGANAGLVNALNLLKP-IKDKYSG 86
Query: 137 MVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIP--GPDDDLNKILHL 194
V+ AD LA+ I AGGP P+ GR D +P GP + +
Sbjct: 87 -VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDV 145
Query: 195 FSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDD 242
F G + +E V+L GAH +G R+R D G G+P+ + D
Sbjct: 146 FYRMGLNDKEIVALSGAHTLG-------RSRP-DRSGWGKPETKYTKD 185
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNI 214
GFSP E VSL+ +H+I
Sbjct: 154 DAGFSPVEVVSLLASHSI 171
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPQDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNI 214
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSI 171
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPD 236
+ + F + RE V+L+GAH +GK ++N Y+ T P+
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHTLGKTH---LKNSGYEGPWTANPN 196
>pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSIA 172
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile
Peroxidase (Vp)
Length = 316
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVYLLASHSIA 172
>pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan
Environment In Pleurotus Eryngii Versatile Peroxidase
Length = 317
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSIA 172
>pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSIA 172
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase
Length = 331
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSIA 172
>pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
pdb|3FJW|B Chain B, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNI 214
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSI 171
>pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNI 214
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSI 171
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEPFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSIA 172
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHTLGKTHLK 183
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHTLGKTHLK 183
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHTLGKTHLK 183
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 18/174 (10%)
Query: 48 YRDKCPDAEKTVRSKMAQL--YSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESH 105
Y PD +K + +L + +K+ +LRL +H A F DS
Sbjct: 4 YPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHS-------AGTF--DSKTKTGG 54
Query: 106 P---IERQA-IPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYP 161
P I+ QA + G D + E ++E P +VS AD LA + + GGP P
Sbjct: 55 PFGTIKHQAELAHGANNGLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITGGPEVP 113
Query: 162 VFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
GR D + + D L + G S ++ V+L G H IG
Sbjct: 114 FHPGREDKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLSDQDIVALSGGHTIG 165
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 153 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 153 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 153 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEWQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 153 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 92 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 149
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 150 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 182
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 148 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
pdb|1LY8|B Chain B, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
Length = 343
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 181 IPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNI 214
IPGP + + IL F GFSP E V L+ AH++
Sbjct: 152 IPGPGNTVTAILDRFGDAGFSPDEVVDLLAAHSL 185
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 92 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 149
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 150 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 182
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 86 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 143
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L+GAH +GK +
Sbjct: 144 ADYVRTFFQRLNMNDREVVALMGAHALGKTHLK 176
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEM 247
+ F + RE V+L+GAH +GK ++N Y+ G G + +++F + +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTH---LKNSGYEGPG-GAANNVFTNEFYLNL 206
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEM 247
+ F + RE V+L+GAH +GK ++N Y+ G G + +++F + +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTH---LKNSGYEGPG-GAANNVFTNEFYLNL 206
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTELK 180
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEM 247
+ F + RE V+L+GAH +GK ++N Y+ G G + +++F + +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTH---LKNSGYEGPG-GAANNVFTNEFYLNL 206
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEM 247
+ F + RE V+L+GAH +GK ++N Y+ G G + +++F + +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTH---LKNSGYEGPG-GAANNVFTNEFYLNL 208
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 91 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 148
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEM 247
+ F + RE V+L+GAH +GK ++N Y+ G G + +++F + +
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAHALGKTH---LKNSGYEGPG-GAANNVFTNEFYLNL 204
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQFIRNRLYDFLGTGQPDPTMSDDFLVEM 247
+ F + RE V+L+GAH +GK ++N Y+ G G + +++F + +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTH---LKNSGYEGPG-GAANNVFTNEFYLNL 203
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 96 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 153
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 186
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 96 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 153
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 186
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 91 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 148
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 181
>pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase
Length = 338
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 155 AGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNI 214
AGGP GR + + +P P D +KIL + GFSP E V L+ +H+I
Sbjct: 122 AGGPRLQFLAGRSNISQP---SPDGLVPDPTDSADKILARMADIGFSPTEVVHLLASHSI 178
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 96 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 153
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 186
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 96 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 153
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 186
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ + F + RE V+L GAH +GK +
Sbjct: 151 ADYVRTFFQRLNMNDREVVALSGAHTLGKTHLK 183
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 180
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 95 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 152
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 185
>pdb|1CK6|A Chain A, Binding Mode Of Salicylhydroxamic Acid To Arthromyces
Ramosus Peroxidase
pdb|1C8I|A Chain A, Binding Mode Of Hydroxylamine To Arthromyces Ramosus
Peroxidase
pdb|1ARP|A Chain A, Crystal Structure Of The Fungal Peroxidase From
Arthromyces Ramosus At 1.9 Angstroms Resolution:
Structural Comparisons With The Lignin And Cytochrome C
Peroxidases
pdb|1ARU|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARV|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARW|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARX|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARY|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1GZA|A Chain A, Peroxidase
pdb|1GZB|A Chain A, Peroxidase
pdb|1HSR|A Chain A, Binding Mode Of Benzhydroxamic Acid To Arthromyces Ramosus
Peroxidase
pdb|2E3B|A Chain A, Crystal Structure Of The Ha-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E3A|A Chain A, Crystal Structure Of The No-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E39|A Chain A, Crystal Structure Of The Cn-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
Length = 344
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
VS D + AT G+ G P TGR S + IPGP + + IL
Sbjct: 112 VSFGDLIQFATAVGMSNCPGSPRLEFLTGRS---NSSQPSPPSLIPGPGNTVTAILDRMG 168
Query: 197 LRGFSPRETVSLIGAHNIGK 216
GFSP E V L+ AH++
Sbjct: 169 DAGFSPDEVVDLLAAHSLAS 188
>pdb|1LYK|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYK|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
VS D + AT G+ G P TGR S + IPGP + + IL
Sbjct: 111 VSFGDLIQFATAVGMSNCPGSPRLEFLTGRS---NSSQPSPPSLIPGPGNTVTAILDRMG 167
Query: 197 LRGFSPRETVSLIGAHNIGK 216
GFSP E V L+ AH++
Sbjct: 168 DAGFSPDEVVDLLAAHSLAS 187
>pdb|1LY9|A Chain A, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LY9|B Chain B, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
VS D + AT G+ G P TGR S + + IPGP + + IL
Sbjct: 111 VSFGDLIQFATAVGMSNCPGSPRLEFLTGRSSSSQPS---PPSLIPGPGNTVTAILDRMG 167
Query: 197 LRGFSPRETVSLIGAHNIGK 216
GFSP E V L+ AH++
Sbjct: 168 DAGFSPDEVVDLLAAHSLAS 187
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDMDKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 93 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDYDKD 150
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GAH +GK +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLK 183
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 181 IPGPDDDLNKILHLFS-LRGFSPRETVSLIGAHNIGK 216
IP P D + KIL F GF+P E VSL+ +H++ +
Sbjct: 141 IPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVAR 177
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 181 IPGPDDDLNKILHLFS-LRGFSPRETVSLIGAHNIGK 216
IP P D + KIL F GF+P E VSL+ +H++ +
Sbjct: 141 IPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVAR 177
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 181 IPGPDDDLNKILHLFS-LRGFSPRETVSLIGAHNIGK 216
IP P D + KIL F GF+P E VSL+ +H++ +
Sbjct: 141 IPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVAR 177
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L GAH +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALKGAHALGKTHLK 180
>pdb|2RJQ|A Chain A, Crystal Structure Of Adamts5 With Inhibitor Bound
Length = 378
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 95 FLDDSNGNESHPIERQAI------PSQTLKGFDKINLIKEELEEACPGMVSCADALALAT 148
FLDD +GN + R+ I P QT + NL CPGM CA
Sbjct: 202 FLDDGHGNCLLDLPRKQILGPEELPGQTYDATQQCNLTFGPEYSVCPGMDVCARLWCAVV 261
Query: 149 RDGILLAGGPYYPVFTG 165
R G ++ P G
Sbjct: 262 RQGQMVCLTKKLPAVEG 278
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
+S D + A G+ GG P F GR D++ + +P D ++ IL
Sbjct: 97 ISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEGFDSVDSILARMG 153
Query: 197 LRGFSPRETVSLIGAHNIG 215
GFSP E V L+ +H+I
Sbjct: 154 DAGFSPVEVVWLLASHSIA 172
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 13/168 (7%)
Query: 48 YRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPI 107
Y+ A+K +R +A+ K+ +LRL +H D G HP
Sbjct: 23 YQKAVEKAKKKLRGFIAE-----KRCAPLMLRLAWHSAGTF--DKGTKTGGPFGTIKHPA 75
Query: 108 ERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRR 167
E + G D + E L+ P ++S AD LA + + GGP P GR
Sbjct: 76 E---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 168 DSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
D + + D L + G + ++ V+L G H IG
Sbjct: 132 DKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 177
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 13/168 (7%)
Query: 48 YRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPI 107
Y+ A+K +R +A+ K+ +LRL +H D G HP
Sbjct: 23 YQKAVEKAKKKLRGFIAE-----KRCAPLMLRLAWHSAGTF--DKGTKTGGPFGTIKHPA 75
Query: 108 ERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRR 167
E + G D + E L+ P ++S AD LA + + GGP P GR
Sbjct: 76 E---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 168 DSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
D + + D L + G + ++ V+L G H IG
Sbjct: 132 DKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 177
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 13/168 (7%)
Query: 48 YRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPI 107
Y+ A+K +R +A+ K+ +LRL +H D G HP
Sbjct: 23 YQKAVEKAKKKLRGFIAE-----KRCAPLMLRLAWHSAGTF--DKGTKTGGPFGTIKHPA 75
Query: 108 ERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRR 167
E + G D + E L+ P ++S AD LA + + GGP P GR
Sbjct: 76 E---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 168 DSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
D + + D L + G + ++ V+L G H IG
Sbjct: 132 DKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 177
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 13/168 (7%)
Query: 48 YRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPI 107
Y+ A+K +R +A+ K+ +LRL +H D G HP
Sbjct: 11 YQKAVEKAKKKLRGFIAE-----KRCAPLMLRLAWHSAGTF--DKGTKTGGPFGTIKHPA 63
Query: 108 ERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRR 167
E + G D + E L+ P ++S AD LA + + GGP P GR
Sbjct: 64 E---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 119
Query: 168 DSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
D + + D L + G + ++ V+L G H IG
Sbjct: 120 DKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 165
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 13/168 (7%)
Query: 48 YRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPI 107
Y+ A+K +R +A+ K+ +L+L +H D G HP
Sbjct: 11 YQKAVEKAKKKLRGFIAE-----KRCAPLMLKLAWHSAGTF--DKGTKTGGPFGTIKHPA 63
Query: 108 ERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRR 167
E + G D + E L+ P ++S AD LA + + GGP P GR
Sbjct: 64 E---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 119
Query: 168 DSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
D + + D L + G + ++ V+L G H IG
Sbjct: 120 DKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 165
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
With Phosphate Bound, Ph 6, 100k
Length = 292
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 91 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 148
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GA +GK +
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAGALGKTHLK 181
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
Ph 6, 100k
pdb|1DSG|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 5, Room Temperature.
pdb|1DSO|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 6, Room Temperature.
pdb|1DSP|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 7, Room Temperature
Length = 292
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 91 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 148
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GA +GK +
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAGALGKTHLK 181
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
pdb|1CCG|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
Length = 291
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 128 EELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDD 187
E + + P +S D +L + GP P GR D+ + +P D D
Sbjct: 90 EPIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKD 147
Query: 188 LNKILHLFSLRGFSPRETVSLIGAHNIGKISCQ 220
+ F + RE V+L+GA +GK +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAGALGKTHLK 180
>pdb|1H3J|A Chain A, Structure Of Recombinant Coprinus Cinereus Peroxidase
Determined To 2.0 A
pdb|1H3J|B Chain B, Structure Of Recombinant Coprinus Cinereus Peroxidase
Determined To 2.0 A
Length = 342
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFS 196
VS D + AT G+ G P TGR S + IPGP + + IL
Sbjct: 110 VSFGDLIQFATAVGMSNCPGSPRLEFLTGRS---NSSQPSPPSLIPGPGNTVTAILDRMG 166
Query: 197 LRGFSPRETVSLIGAHNIGK 216
GFSP E V L+ A ++
Sbjct: 167 DAGFSPDEVVDLLAAXSLAS 186
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 62/168 (36%), Gaps = 13/168 (7%)
Query: 48 YRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPI 107
Y+ A+K +R +A+ K+ +LRL H D G HP
Sbjct: 23 YQKAVEKAKKKLRGFIAE-----KRCAPLMLRLAAHSAGTF--DKGTKTGGPFGTIKHPA 75
Query: 108 ERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRR 167
E + G D + E L+ P ++S AD LA + + GGP P GR
Sbjct: 76 E---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 168 DSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
D + + D L + G + ++ V+L G H IG
Sbjct: 132 DKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 177
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 64/173 (36%), Gaps = 23/173 (13%)
Query: 48 YRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSN-----GN 102
Y+ A+K +R +A+ K+ +LRL C A F + G
Sbjct: 23 YQKAVEKAKKKLRGFIAE-----KRCAPLMLRL-------AACSAGTFDKGTKTGGPFGT 70
Query: 103 ESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPV 162
HP E + G D + E L+ P ++S AD LA + + GGP P
Sbjct: 71 IKHPAE---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPF 126
Query: 163 FTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
GR D + + D L + G + ++ V+L G H IG
Sbjct: 127 HPGREDKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 177
>pdb|1CC4|A Chain A, Phe161 And Arg166 Variants Of P-Hydroxybenzoate
Hydroxylase. Implications For Nadph Recognition And
Structural Stability
Length = 394
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 12/41 (29%)
Query: 84 DC-FIMGCDASVFLDDSNGNESHPIERQAIPSQTLKGFDKI 123
DC +I GCD + H I RQ+IP++ LK F+++
Sbjct: 151 DCDYIAGCDGA-----------HGISRQSIPAERLKVFERV 180
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 13/168 (7%)
Query: 48 YRDKCPDAEKTVRSKMAQLYSQDKQVPANLLRLFFHDCFIMGCDASVFLDDSNGNESHPI 107
Y+ A+K +R +A+ K+ +L L +H D G HP
Sbjct: 11 YQKAVEKAKKKLRGFIAE-----KRCAPLMLALAWHSAGTF--DKGTKTGGPFGTIKHPA 63
Query: 108 ERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYYPVFTGRR 167
E + G D + E L+ P ++S AD LA + + GGP P GR
Sbjct: 64 E---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 119
Query: 168 DSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
D + + D L + G + ++ V+L G H IG
Sbjct: 120 DKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 165
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 101 GNESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
G HP E + G D + E L+ P ++S AD LA + + GGP
Sbjct: 69 GTIKHPAE---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEV 124
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
P GR D + + D L + G + ++ V+L G H IG
Sbjct: 125 PFHPGREDKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 177
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 101 GNESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
G HP E + G D + E L+ P ++S AD LA + + GGP
Sbjct: 69 GTIKHPAE---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEV 124
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
P GR D + + D L + G + ++ V+L G H IG
Sbjct: 125 PFHPGREDKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 177
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 101 GNESHPIERQAIPSQTLKGFDKINLIKEELEEACPGMVSCADALALATRDGILLAGGPYY 160
G HP E + G D + E L+ P ++S AD LA + + GGP
Sbjct: 57 GTIKHPAE---LAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEV 112
Query: 161 PVFTGRRDSIRSYFQEATAEIPGPDDDLNKILHLFSLRGFSPRETVSLIGAHNIG 215
P GR D + + D L + G + ++ V+L G H IG
Sbjct: 113 PFHPGREDKPEPPPEGRLPDATKGSDHLRDVFG--KAMGLTDQDIVALSGGHTIG 165
>pdb|1QPA|A Chain A, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65)
pdb|1QPA|B Chain B, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65)
Length = 345
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 138 VSCADALALATRDGIL-LAGGPYYPVFTGRRDSIRSYFQEATAEIPGPDDDLNKIL-HLF 195
V+ D +A A G+ G P F GR ++ ++ +P P ++++L +
Sbjct: 104 VTPGDFIAFAGAVGVSNCPGAPQMQFFLGRPEATQA---APDGLVPEPFHTIDQVLARML 160
Query: 196 SLRGFSPRETVSLIGAHNIG 215
GF ETV L+ AH+I
Sbjct: 161 DAGGFDEIETVXLLSAHSIA 180
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,667,948
Number of Sequences: 62578
Number of extensions: 421215
Number of successful extensions: 1185
Number of sequences better than 100.0: 123
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1010
Number of HSP's gapped (non-prelim): 142
length of query: 377
length of database: 14,973,337
effective HSP length: 100
effective length of query: 277
effective length of database: 8,715,537
effective search space: 2414203749
effective search space used: 2414203749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)