BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035581
(476 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL+ + +++ D+ E L FR D G+++ A++ + ++ +K +
Sbjct: 65 FPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 119 ------EEVDEMIREAD 129
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 317 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGNG------TID 365
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 366 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 419
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 420 ------EEVDEMIREAD 430
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 17 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEV-----DADGNGT-ID 65
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 119
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 120 ------EEVDEMIREAD 130
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 318 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGNG------TID 366
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 367 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 420
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 421 ------EEVDEMIREAD 431
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 317 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 365
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 366 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 419
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 420 ------EEVDEMIREAD 430
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 32/136 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELC 413
F FL ++A + KD+ E + FR D G+++ A++ + ++ +K +
Sbjct: 65 FPEFL-TMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD------- 116
Query: 414 IEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 117 -----EEVDEMIREAD 127
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 13 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 61
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL+ + +++ D+ E L FR D G+++ A++ + ++ +K +
Sbjct: 62 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTD------ 115
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 116 ------EEVDEMIREAD 126
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL+ + +++ D+ E L FR D G+++ A++ + ++ +K +
Sbjct: 65 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 119 ------EEVDEMIREAD 129
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 280 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 328
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 329 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 382
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 383 ------EEVDEMIREAD 393
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 308 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGDG------TID 356
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 357 FPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 410
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 411 ------EEVDEMIREAD 421
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + + F DKD NG +S ELR L E + DE +R G +++
Sbjct: 373 SEEEIREAFRVFDKDGNGYISAAELRHVMT-NLGEKLTDEEVDEMIREADIDGDG--QVN 429
Query: 354 FDNFLDFVLA 363
++ F+ + A
Sbjct: 430 YEEFVQMMTA 439
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 316 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGDG------TID 364
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 365 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 418
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 419 ------EEVDEMIREAD 429
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 283 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 331
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 332 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 385
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 386 ------EEVDEMIREAD 396
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 283 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 331
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 332 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 385
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 386 ------EEVDEMIREAD 396
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 14 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 62
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 116
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 117 ------EEVDEMIREAD 127
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 317 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGNG------TID 365
Query: 354 FDNFLDFVLA-LENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 366 FPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 419
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 420 ------EEVDEMIREAD 430
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 289 WFSLT-SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGG 347
W T S + + + F DKD NG +S ELR L E + DE +R G
Sbjct: 376 WMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT-NLGEKLTDEEVDEMIREADIDGD 434
Query: 348 NAREMDFDNFLDFVLA 363
+++++ F+ + A
Sbjct: 435 G--QVNYEEFVQMMTA 448
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 18 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 66
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 67 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 120
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 121 ------EEVDEMIREAD 131
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 20 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 68
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 122
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 123 ------EEVDEMIREAD 133
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 17 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 65
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 119
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 120 ------EEVDEMIREAD 130
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 14 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 62
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 116
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 117 ------EEVDEMIREAD 127
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 12 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 60
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 114
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 115 ------EEVDEMIREAD 125
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 17 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 65
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 119
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 120 ------EEVDEMIREAD 130
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 17 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 65
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 119
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 120 ------EEVDEMIREAD 130
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 13 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 61
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 62 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 115
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 116 ------EEVDEMIREAD 126
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 22 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 70
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 71 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 124
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 125 ------EEVDEMIREAD 135
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 119 ------EEVDEMIREAD 129
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 119 ------EEVDEMIREAD 129
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 14 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 62
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 116
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 117 ------EEVDEMIREAD 127
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 161 FMKFEKDESGRIAI--LPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYI---R 215
F +F+ + G+I+ L L + +V+ + R M+E+D D DGF+ E + R
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR 76
Query: 216 GLIPSLAQL 224
GL+ ++++
Sbjct: 77 GLVKDVSKI 85
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 15 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 63
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 64 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 117
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 118 ------EEVDEMIREAD 128
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FALFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + ++ +D+ E L F+ D G ++ A++ + ++ +K +
Sbjct: 65 FPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
DE+ +M++ AD
Sbjct: 119 ------DEVDEMIREAD 129
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FALFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + ++ +D+ E L F+ D G ++ A++ + ++ +K +
Sbjct: 65 FPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
DE+ +M++ AD
Sbjct: 119 ------DEVDEMIREAD 129
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + D+F DK+A+G + +EL+ T E E +E ++ G N +D
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 149
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 150 YDEFLEFMKGVE 161
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + D+F DK+A+G + +EL+ T E E +E ++ G N +D
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 61
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 62 YDEFLEFMKGVE 73
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 289 WFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGT---LTEIFIERVFDEHVRRGKSG 345
W +T Q V F D+D +G + K EL++ G L++ F + + + R+G+
Sbjct: 70 WKYITDWQNV---FRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRG- 125
Query: 346 GGNAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTA 391
++ FD+F+ + L+ LT +FR D + G++ +
Sbjct: 126 -----QIAFDDFIQGCIVLQR------LTDIFRRYDTDQDGWIQVS 160
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + D+F DK+A+G + +EL+ T E E +E ++ G N +D
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 59
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 60 YDEFLEFMKGVE 71
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 289 WFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGT-LTEIFIERVFDEHVRRGKSGGG 347
W +T Q V F D+D +G + K EL++ G L++ F + + + R+G+
Sbjct: 67 WKYITDWQNV---FRTYDRDNSGMIDKNELKQALSGYRLSDQFHDILIRKFDRQGRG--- 120
Query: 348 NAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTA 391
++ FD+F+ + L+ LT +FR D + G++ +
Sbjct: 121 ---QIAFDDFIQGCIVLQR------LTDIFRRYDTDQDGWIQVS 155
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 295 AQRVCDMFIALDKDANGTLSKQELRE 320
++ + D F ALDK+ NGT+ + ELR+
Sbjct: 75 SKEMLDAFRALDKEGNGTIQEAELRQ 100
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 17 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 65
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 119
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ M++ AD
Sbjct: 120 ------EEVDQMIREAD 130
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 161 FMKFEKDESGRI--AILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAY---IR 215
F +F+ + G+I A L L + +++ + + M+E+D D DGF+ E + R
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEFTDFGRANR 74
Query: 216 GLIPSLAQL 224
GL+ +A++
Sbjct: 75 GLLKDVAKI 83
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 284 EQAENWFSLTSAQR--VCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRR 341
+Q + LT Q+ + + F D D +GT+ +EL+ E E +
Sbjct: 14 DQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEI 73
Query: 342 GKSGGGNAREMDFDNFLDFVLA-LENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDV 400
K G G +DF+ FL + A + +D+ E + FR D G +T D+ + +++
Sbjct: 74 DKDGSGT---IDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL 130
Query: 401 HQKWIEGGNYELCIEDVRDE 420
+ E E+ E R++
Sbjct: 131 GENLTEEELQEMIAEADRND 150
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 317 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGNG------TID 365
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + ++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 366 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 419
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 420 ------EEVDEMIREAD 430
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 295 AQRVCDMFIALDKDANGTLSKQELREYAD--GTLTEIFIERVFDEHVRRGKSGGGNAREM 352
Q++ F+ LD++ G ++K +LR+ + G + + + D+ G GN +
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDLLLDQI---DSDGSGN---I 107
Query: 353 DFDNFLDFVLALENKDTPEGLTY-LFRSLDLQERGYLTTADI-HSLF----------RDV 400
D+ FL A++ + + L Y FR D+ G +TTA++ H LF RDV
Sbjct: 108 DYTEFL--AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDV 165
Query: 401 HQ 402
+Q
Sbjct: 166 NQ 167
>pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21
Length = 816
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 342 GKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRD 399
GK+ + + DFD F F LAL + EG +F+ L + +G +TT +FRD
Sbjct: 203 GKNDAIDLKAFDFDTFFKFYLALLERSEIEG---IFKELS-KNKGNITTV----MFRD 252
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGDGT------ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 119 ------EEVDEMIREAD 129
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIE 406
F FL + +++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 118
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 316 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGDG------TID 364
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + ++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 365 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 418
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 419 ------EEVDEMIREAD 429
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 317 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGDG------TID 365
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + ++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 366 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 419
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 420 ------EEVDEMIREAD 430
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E G +D
Sbjct: 316 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGDG------TID 364
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + ++ D+ E + FR D GY++ A++ + ++ +K +
Sbjct: 365 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD------ 418
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 419 ------EEVDEMIREAD 429
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 161 FMKFEKDESGRIAI--LPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIR--- 215
F +F+ + G+I++ L L + + S + + M+E+D D DGF+ +E ++
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNANP 67
Query: 216 GLIPSLAQL 224
GL+ +A++
Sbjct: 68 GLMKDVAKV 76
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
+ + + D+F DK+A+G + +EL+ T E E +E ++ G N +D
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 149
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 150 YDEFLEFMKGVE 161
>pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21
pdb|3QR1|D Chain D, Crystal Structure Of L. Pealei Plc21
Length = 813
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 342 GKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRD 399
GK+ + DFD F F L+L + EG +F+ L Q +G +TT +FRD
Sbjct: 203 GKNDAIEIKAFDFDTFFKFYLSLLERSEIEG---IFKELS-QNKGNITTV----MFRD 252
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 289 WFSLTSAQRVCDMFIALDKDANGTLSKQELREYADG---TLTEIFIERVFDEHVRRGKSG 345
W +T Q V F D+D +G + K EL++ G L++ F + + + R+G+
Sbjct: 89 WKYITDWQNV---FRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG- 144
Query: 346 GGNAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTA 391
++ FD+F+ + L+ LT +FR D + G++ +
Sbjct: 145 -----QIAFDDFIQGCIVLQR------LTDIFRRYDTDQDGWIQVS 179
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 289 WFSLTSAQRVCDMFIALDKDANGTLSKQELREYADG---TLTEIFIERVFDEHVRRGKSG 345
W +T Q V F D+D +G + K EL++ G L++ F + + + R+G+
Sbjct: 70 WKYITDWQNV---FRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG- 125
Query: 346 GGNAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTA 391
++ FD+F+ + L+ LT +FR D + G++ +
Sbjct: 126 -----QIAFDDFIQGCIVLQR------LTDIFRRYDTDQDGWIQVS 160
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + D+F DK+A+G + EL+ T E E +E ++ G N +D
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 60
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 61 YDEFLEFMKGVE 72
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 161 FMKFEKDESGRIAI--LPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIR--- 215
F +F+ + G+I++ L L + + S + + M+E+D D DGF+ +E ++
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNANP 68
Query: 216 GLIPSLAQL 224
GL+ +A++
Sbjct: 69 GLMKDVAKV 77
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 285 QAENWFSLTSAQRVCDMFIALDKDANGTLSK---QELREYADGTLTEIFIERVFDE 337
+ E FS + R+ F +LDK NGTLS+ Q + E A L + I F E
Sbjct: 18 KKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSE 73
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 289 WFSLTSAQRVCDMFIALDKDANGTLSKQELREYADG---TLTEIFIERVFDEHVRRGKSG 345
W +T Q V F D+D +G + K EL++ G L++ F + + + R+G+
Sbjct: 67 WKYITDWQNV---FRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG- 122
Query: 346 GGNAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTA 391
++ FD+F+ + L+ LT +FR D + G++ +
Sbjct: 123 -----QIAFDDFIQGCIVLQR------LTDIFRRYDTDQDGWIQVS 157
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
+ + + D+F DK+A+G + +EL+ T E E +E ++ G N +D
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 149
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 150 YDEFLEFMKGVE 161
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 335 FDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLT-YLFRSLDLQERGYLTTADI 393
F E + R S + F++FLD + + TP+ + Y FR D + G L D+
Sbjct: 61 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 120
Query: 394 HSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPAD 429
L V+ EG + L +++ I ++++ +D
Sbjct: 121 SRL---VNCLTGEGEDTRLSASEMKQLIDNILEESD 153
>pdb|1DR1|A Chain A, 2.2 Angstroms Crystal Structure Of Chicken Liver
Dihydrofolate Reductase Complexed With Nadp+ And
Biopterin
pdb|1DR2|A Chain A, 2.3 Angstroms Crystal Structure Of Chicken Liver
Dihydrofolate Reductase Complexed With Thionadp+ And
Biopterin
pdb|1DR3|A Chain A, 2.3 Angstroms Crystal Structure Of Chicken Liver
Dihydrofolate Reductase Complexed With Thionadp+ And
Biopterin
pdb|1DR4|A Chain A, Crystal Structures Of Organomercurial-Activated Chicken
Liver Dihydrofolate Reductase Complexes
pdb|1DR5|A Chain A, Crystal Structures Of Organomercurial-Activated Chicken
Liver Dihydrofolate Reductase Complexes
pdb|1DR6|A Chain A, Crystal Structures Of Organomercurial-Activated Chicken
Liver Dihydrofolate Reductase Complexes
pdb|1DR7|A Chain A, Crystal Structures Of Organomercurial-Activated Chicken
Liver Dihydrofolate Reductase Complexes
pdb|8DFR|A Chain A, Refined Crystal Structures Of Chicken Liver Dihydrofolate
Reductase. 3 Angstroms Apo-Enzyme And 1.7 Angstroms
Nadph Holo-Enzyme Complex
Length = 189
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGG 408
++ VL+ E K+ P+G YL +SLD L D L V WI GG
Sbjct: 71 INIVLSRELKEAPKGAHYLSKSLD----DALALLDSPELKSKVDMVWIVGG 117
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
+ + + D+F DK+A+G + +EL+ T E E +E ++ G N +D
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 69
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 70 YDEFLEFMKGVE 81
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 289 WFSLTSAQRVCDMFIALDKDANGTLSKQELREYADG---TLTEIFIERVFDEHVRRGKSG 345
W +T Q V F D+D +G + K EL++ G L++ F + + + R+G+
Sbjct: 88 WKYITDWQNV---FRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG- 143
Query: 346 GGNAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTA 391
++ FD+F+ + L+ LT +FR D + G++ +
Sbjct: 144 -----QIAFDDFIQGCIVLQR------LTDIFRRYDTDQDGWIQVS 178
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 289 WFSLTSAQRVCDMFIALDKDANGTLSKQELREYADG---TLTEIFIERVFDEHVRRGKSG 345
W +T Q V F D+D +G + K EL++ G L++ F + + + R+G+
Sbjct: 66 WKYITDWQNV---FRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG- 121
Query: 346 GGNAREMDFDNFLDFVLALENKDTPEGLTYLFRSLDLQERGYLTTA 391
++ FD+F+ + L+ LT +FR D + G++ +
Sbjct: 122 -----QIAFDDFIQGCIVLQR------LTDIFRRYDTDQDGWIQVS 156
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 285 QAENWFSLTSAQRVCDMFIALDKDANGTLSK---QELREYADGTLTEIFIERVFDE 337
+ E FS + R+ F +LDK NGTLS+ Q + E A L + I F E
Sbjct: 18 KKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPE 73
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
+ + + D+F DK+A+G + +EL+ T E E +E ++ G N +D
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 64
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 65 YDEFLEFMKGVE 76
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + D+F DK+A+G + EL+ T E E +E ++ G N +D
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 149
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 150 YDEFLEFMKGVE 161
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 17 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 65
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D G+++ A++ + ++ +K +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD------ 119
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 120 ------EEVDEMIREAD 130
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 21/114 (18%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 12 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 60
Query: 354 FDNFLDFVLALENKDT-PEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIE 406
F FL ++A + KDT E + FR D GY++ A++ + ++ +K +
Sbjct: 61 FPEFL-TMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 113
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 293 TSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREM 352
T ++ + + F DKD NG +S ELR + L E + DE +R G ++
Sbjct: 75 TDSEEIREAFRVFDKDGNGYISAAELR-HVMTNLGEKLTDEEVDEMIREANIDGDG--QV 131
Query: 353 DFDNFLDFVLA 363
+++ F+ + A
Sbjct: 132 NYEEFVQMMTA 142
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 17 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 65
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D G+++ A++ + ++ +K +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD------ 119
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 120 ------EEVDEMIREAD 130
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D G+++ A++ + ++ +K +
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 119 ------EEVDEMIREAD 129
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + D+F DK+A+G + EL+ T E E +E ++ G N +D
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQAT-GETITEDDIEELMKDGDK--NNDGRID 149
Query: 354 FDNFLDFVLALE 365
+D FL+F+ +E
Sbjct: 150 YDEFLEFMKGVE 161
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D G+++ A++ + ++ +K +
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 119 ------EEVDEMIREAD 129
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 335 FDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLT-YLFRSLDLQERGYLTTADI 393
F E + R S + F++FLD + + TP+ + Y FR D + G L D+
Sbjct: 92 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 151
Query: 394 HSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPAD 429
L V+ EG + L +++ I ++++ +D
Sbjct: 152 SRL---VNCLTGEGEDTRLSASEMKQLIDNILEESD 184
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + + F DKD NG +S ELR + L E + DE +R G +++
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELR-HVXTNLGEKLTDEEVDEXIREADIDGDG--QVN 137
Query: 354 FDNFL 358
++ F+
Sbjct: 138 YEEFV 142
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 8/32 (25%)
Query: 295 AQRVCD--------MFIALDKDANGTLSKQEL 318
A+ +CD +FIALD D +GTLS QE+
Sbjct: 48 AKHLCDVEINNLRNIFIALDVDNSGTLSSQEI 79
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + + F DKD NG +S ELR + L E + DE +R G +++
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELR-HVMTNLGEKLTDEEVDEMIREADVDGDG--QIN 138
Query: 354 FDNFLDFVLA 363
+D F+ ++A
Sbjct: 139 YDEFVKVMMA 148
>pdb|1HFQ|A Chain A, Comparison Of Ternary Crystal Complexes Of Human
Dihydrofolate Reductase With Nadph And A Classical
Antitumor Furopyrimdine
Length = 186
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|3F8Z|A Chain A, Human Dihydrofolate Reductase Structural Data With Active
Site Mutant Enzyme Complexes
Length = 187
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 72 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 119
>pdb|3EIG|A Chain A, Crystal Structure Of A Methotrexate-Resistant Mutant Of
Human Dihydrofolate Reductase
Length = 186
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|1MVS|A Chain A, Analysis Of Two Polymorphic Forms Of A Pyrido[2,3-
D]pyrimidine N9-C10 Reverse-Bridge Antifolate Binary
Complex With Human Dihydrofolate Reductase
pdb|1MVT|A Chain A, Analysis Of Two Polymorphic Forms Of A Pyrido[2,3-
D]pyrimidine N9-C10 Reverse-Bridge Antifolate Binary
Complex With Human Dihydrofolate Reductase
pdb|3FS6|A Chain A, Correlations Of Inhibitor Kinetics For Pneumocystis
Jirovecii And Human Dihydrofolate Reductase With
Structural Data For Human Active Site Mutant Enzyme
Complexes
pdb|3GYF|A Chain A, Human Dhfr With Z-Isomer In Orthorhombic Lattice
pdb|2W3A|A Chain A, Human Dihydrofolate Reductase Complexed With Nadph And
Trimethoprim
pdb|2W3A|B Chain B, Human Dihydrofolate Reductase Complexed With Nadph And
Trimethoprim
pdb|2W3B|A Chain A, Human Dihydrofolate Reductase Complexed With Nadph And A
Lipophilic Antifolate Selective For Mycobacterium Avium
Dhfr, 6-((2,5-Diethoxyphenyl)aminomethyl)-2,4-Diamino-5-
Methylpyrido(2,3-D)pyrimidine (Sri-8686)
pdb|2W3B|B Chain B, Human Dihydrofolate Reductase Complexed With Nadph And A
Lipophilic Antifolate Selective For Mycobacterium Avium
Dhfr, 6-((2,5-Diethoxyphenyl)aminomethyl)-2,4-Diamino-5-
Methylpyrido(2,3-D)pyrimidine (Sri-8686)
pdb|2W3M|A Chain A, Human Dihydrofolate Reductase Complexed With Nadph And
Folate
pdb|2W3M|B Chain B, Human Dihydrofolate Reductase Complexed With Nadph And
Folate
Length = 187
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 72 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 119
>pdb|3F91|A Chain A, Structural Data For Human Active Site Mutant Enzyme
Complexes
Length = 187
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 72 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 119
>pdb|1U71|A Chain A, Understanding The Role Of Leu22 Variants In Methotrexate
Resistance: Comparison Of Wild-type And Leu22arg Variant
Mouse And Human Dihydrofolate Reductase Ternary Crystal
Complexes With Methotrexate And Nadph
Length = 186
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|3GHC|A Chain A, Design, Synthesis, And X-Ray Crystal Structure Of
Classical And Nonclassical
2-Amino-4-Oxo-5-Substituted-6-Thieno[2,3- D]pyrimidines
As Dual Thymidylate Synthase And Dihydrofolate Reductase
Inhibitors And As Potential Antitumor Agenst
Length = 186
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|3GHV|A Chain A, Human Dihydrofolate Reductase Q35kN64F DOUBLE MUTANT
INHIBITOR Complex
pdb|3S3V|A Chain A, Human Dihydrofolate Reductase Q35kN64F DOUBLE MUTANT
BINARY COMPLEX With Trimethoprim
Length = 186
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|3F8Y|A Chain A, Correlations Of Human Dihydrofolate Reductase With
Structural Data For Human Active Site Mutant Enzyme
Complexes
pdb|3GI2|A Chain A, Human Dihydrofolate Reductase Q35k Mutant Inhibitor
Complex
Length = 187
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 72 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 119
>pdb|1DHF|A Chain A, Crystal Structures Of Recombinant Human Dihydrofolate
Reductase Complexed With Folate And 5-Deazofolate
pdb|1DHF|B Chain B, Crystal Structures Of Recombinant Human Dihydrofolate
Reductase Complexed With Folate And 5-Deazofolate
pdb|2DHF|A Chain A, Crystal Structures Of Recombinant Human Dihydrofolate
Reductase Complexed With Folate And 5-Deazofolate
pdb|2DHF|B Chain B, Crystal Structures Of Recombinant Human Dihydrofolate
Reductase Complexed With Folate And 5-Deazofolate
pdb|1KMS|A Chain A, Human Dihydrofolate Reductase Complexed With Nadph And 6-
([5-Quinolylamino]methyl)-2,4-Diamino-5-Methylpyrido[2,
3- D]pyrimidine (Sri-9439), A Lipophilic Antifolate
pdb|1KMV|A Chain A, Human Dihydrofolate Reductase Complexed With Nadph And
(Z)-
6-(2-[2,5-Dimethoxyphenyl]ethen-1-Yl)-2,4-Diamino-5-
Methylpyrido[2,3-D]pyrimidine (Sri-9662), A Lipophilic
Antifolate
pdb|1PD8|A Chain A, Analysis Of Three Crystal Structure Determinations Of A 5-
Methyl-6-n-methylanilino Pyridopyrimidine Antifolate
Complex With Human Dihydrofolate Reductase
pdb|1PD9|A Chain A, Analysis Of Three Crystal Structure Determinations Of A 5-
Methyl-6-N-Methylanilino Pyridopyrimidine Antifolate
Complex With Human Dihydrofolate Reductase
pdb|1PDB|A Chain A, Analysis Of Three Crystal Structure Determinations Of A 5-
Methyl-6-N-Methylanilino Pyridopyrimidine Antifolate
Complex With Human Dihydrofolate Reductase
pdb|1S3U|A Chain A, Structure Determination Of Tetrahydroquinazoline
Antifolates In Complex With Human And Pneumocystis
Carinii Dihydrofolate Reductase: Correlations Of Enzyme
Selectivity And Stereochemistry
pdb|1S3V|A Chain A, Structure Determination Of Tetrahydroquinazoline
Antifolates In Complex With Human And Pneumocystis
Carinii Dihydrofolate Reductase: Correlations Of Enzyme
Selectivity And Stereochemistry
pdb|1S3W|A Chain A, Structure Determination Of Tetrahydroquinazoline
Antifoaltes In Complex With Human And Pneumocystis
Carinii Dihydrofolate Reductase: Correlations Of Enzyme
Selectivity And Stereochemistry
pdb|1U72|A Chain A, Understanding The Role Of Leu22 Variants In Methotrexate
Resistance: Comparison Of Wild-Type And Leu22arg Variant
Mouse And Human Dihydrfolate Reductase Ternary Crystal
Complexes With Methotrexate And Nadph
pdb|1YHO|A Chain A, Solution Structure Of Human Dihydrofolate Reductase
Complexed With Trimethoprim And Nadph, 25 Structures
pdb|2C2S|A Chain A, Human Dihydrofolate Reductase Complexed With Nadph And
2,4-
Diamino-5-(1-O-Carboranylmethyl)-6-Methylpyrimidine, A
Novel Boron Containing, Nonclassical Antifolate
pdb|2C2S|B Chain B, Human Dihydrofolate Reductase Complexed With Nadph And
2,4-
Diamino-5-(1-O-Carboranylmethyl)-6-Methylpyrimidine, A
Novel Boron Containing, Nonclassical Antifolate
pdb|2C2T|A Chain A, Human Dihydrofolate Reductase Complexed With Nadph And
2,4- Diamino-5-((7,8-Dicarbaundecaboran-7-Yl)methyl)-6-
Methylpyrimidine, A Novel Boron Containing, Nonclassical
Antifolate
pdb|2C2T|B Chain B, Human Dihydrofolate Reductase Complexed With Nadph And
2,4- Diamino-5-((7,8-Dicarbaundecaboran-7-Yl)methyl)-6-
Methylpyrimidine, A Novel Boron Containing, Nonclassical
Antifolate
pdb|1DRF|A Chain A, Crystal Structure Of Human Dihydrofolate Reductase
Complexed With Folate
pdb|1HFR|A Chain A, Comparison Of Ternary Crystal Complexes Of Human
Dihydrofolate Reductase With Nadph And A Classical
Antitumor Furopyrimdine
pdb|1OHJ|A Chain A, Human Dihydrofolate Reductase, Monoclinic (P21) Crystal
Form
pdb|1OHK|A Chain A, Human Dihydrofolate Reductase, Orthorhombic (P21 21 21)
Crystal Form
pdb|3GHW|A Chain A, Human Dihydrofolate Reductase Inhibitor Complex
pdb|3NXR|A Chain A, Perferential Selection Of Isomer Binding From Chiral
Mixtures: Alternate Binding Modes Observed For The E-
And Z-Isomers Of A Series Of 5-Substituted
2,4-Diaminofuro[2,3-D]pyrimidines As Ternary Complexes
With Nadph And Human Dihydrofolate Reductase
pdb|3NXT|A Chain A, Preferential Selection Of Isomer Binding From Chiral
Mixtures: Alternate Binding Modes Observed For The E-And
Z-Isomers Of A Series Of 5-Substituted
2,4-Diaminofuro[2m,3-D]pyrimidines As Ternary Complexes
With Nadph And Human Dihydrofolate Reductase
pdb|3NXV|A Chain A, Preferential Selection Of Isomer Binding From Chiral
Mixtures: Alternate Binding Modes Observed For The E-
And Z-Isomers Of A Series Of 5-Substituted
2,4-Diaminofuro[2,3-D]pyrimidines As Ternary Complexes
With Nadph And Human Dihydrofolate Reductase
pdb|3NXX|A Chain A, Preferential Selection Of Isomer Binding From Chiral
Mixtures: Alternate Binding Modes Observed For The E-
And Z-Isomers Of A Series Of 5-Substituted
2,4-Diaminofuro-2,3-D]pyrimidines As Ternary Complexes
With Nadph And Human Dihydrofolate Reductase
pdb|3NXY|A Chain A, Preferential Selection Of Isomer Binding From Chiral
Mixtures: Alernate Binding Modes Observed Fro The E- And
Z-Isomers Of A Series Of 5-Substituted
2,4-Diaminofuro[2,3-D]pyrimidines As Ternary Complexes
With Nadph And Human Dihydrofolate Reductase
pdb|3NZD|A Chain A, Structural Analysis Of Pneumocystis Carinii And Human Dhfr
Complexes With Nadph And A Series Of Five
5-(Omega-Carboxy(Alkyloxy(Pyrido[2,3- D]pyrimidine
Derivatives
pdb|3NTZ|A Chain A, Design, Synthesis, Biological Evaluation And X-Ray Crystal
Structures Of Novel Classical
6,5,6-Tricyclicbenzo[4,5]thieno[2,3-D]pyrimidines As
Dual Thymidylate Synthase And Dihydrofolate Reductase
Inhibitors
pdb|3NU0|A Chain A, Design, Synthesis, Biological Evaluation And X-ray Crystal
Structure Of Novel Classical
6,5,6-tricyclicbenzo[4,5]thieno[2,3-d]pyrimidines As
Dual Thymidylate Synthase And Dihydrofolate Reductase
Inhibitors
pdb|3S7A|A Chain A, Human Dihydrofolate Reductase Binary Complex With Pt684
pdb|4DDR|A Chain A, Human Dihydrofolate Reductase Complexed With Nadph And
P218
Length = 186
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 28.5 bits (62), Expect = 8.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 294 SAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMD 353
S + + + F DKD NG +S ELR + L E + DE +R G +++
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELR-HVXTNLGEKLTDEEVDEXIREADIDGDG--QVN 137
Query: 354 FDNFL 358
++ F+
Sbjct: 138 YEEFV 142
Score = 28.5 bits (62), Expect = 9.3, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 300 DMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFL- 358
+ F DKD +GT++ +EL +L + E + + + G +DF FL
Sbjct: 14 EAFSLFDKDGDGTITTKELGT-VXRSLGQNPTEAELQDXINEVDADGNGT--IDFPEFLT 70
Query: 359 DFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQK 403
++ D+ E + FR D GY++ A++ + ++ +K
Sbjct: 71 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 115
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 17 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 65
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ + +
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTD------ 119
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 120 ------EEVDEMIREAD 130
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 32/137 (23%)
Query: 302 FIALDKDANGTLSKQELREYADGTL--------TEIFIERVFDEHVRRGKSGGGNAREMD 353
F DKD +GT++ +EL GT+ TE ++ + +E GN +D
Sbjct: 16 FSLFDKDGDGTITTKEL-----GTVMRSLGQNPTEAELQDMINE-----VDADGNGT-ID 64
Query: 354 FDNFLDFVL-ALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGNYEL 412
F FL + +++ D+ E + FR D GY++ A++ + ++ + +
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTD------ 118
Query: 413 CIEDVRDEIWDMVKPAD 429
+E+ +M++ AD
Sbjct: 119 ------EEVDEMIREAD 129
>pdb|3NXO|A Chain A, Perferential Selection Of Isomer Binding From Chiral
Mixtures: Alternate Binding Modes Observed For The E-
And Z-Isomers Of A Series Of 5-Substituted
2,4-Diaminofuro[2,3-D]pyrimidines As Ternary Complexes
With Nadph And Human Dihydrofolate Reductase
Length = 186
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|3L3R|A Chain A, Structural, Computational And Kinetic Data For Antifolate
Interactions Against Pneumocystis Jirovecii,
Pneumocystis Carinii And Human Dihydrofolate Reductase
And Their Active Site Mutants
Length = 186
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|1DLR|A Chain A, Methotrexate-Resistant Variants Of Human Dihydrofolate
Reductase With Substitution Of Leucine 22: Kinetics,
Crystallography And Potential As Selectable Markers
Length = 186
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|1BOZ|A Chain A, Structure-Based Design And Synthesis Of Lipophilic 2,4-
Diamino-6-Substituted Quinazolines And Their Evaluation
As Inhibitors Of Dihydrofolate Reductase And Potential
Antitumor Agents
pdb|1HFP|A Chain A, Comparison Of Ternary Crystal Complexes Of Human
Dihydrofolate Reductase With Nadph And A Classical
Antitumor Furopyrimdine
Length = 186
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|4A5Z|A Chain A, Structures Of Mitd1
pdb|4A5Z|B Chain B, Structures Of Mitd1
pdb|4A5Z|C Chain C, Structures Of Mitd1
pdb|4A5Z|D Chain D, Structures Of Mitd1
Length = 163
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Query: 303 IALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVL 362
I ++++A G + REY + T+TE++IE + H + NFL F
Sbjct: 12 IKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQ------------LYNFLRFCE 59
Query: 363 ALENKDTPEGLTYLFRSLD 381
L + +L SLD
Sbjct: 60 XLIKRPCKVKTIHLLTSLD 78
>pdb|3OAF|A Chain A, Structural And Kinetic Data For Antifolate Interactions
Against Pneumocystis Jirovecii, Pneumocystis Carinii And
Human Dihydrofolate Reductase And Thier Active Site
Mutants
pdb|3N0H|A Chain A, Hdhfr Double Mutant Q35sN64F TRIMETHOPRIM BINARY COMPLEX
Length = 186
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|1DLS|A Chain A, Methotrexate-Resistant Variants Of Human Dihydrofolate
Reductase With Substitution Of Leucine 22: Kinetics,
Crystallography And Potential As Selectable Markers
Length = 186
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 358 LDFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQKWIEGGN 409
++ VL+ E K+ P+G +L RSLD L + L V WI GG+
Sbjct: 71 INLVLSRELKEPPQGAHFLSRSLD----DALKLTEQPELANKVDMVWIVGGS 118
>pdb|2YMB|A Chain A, Structures Of Mitd1
pdb|2YMB|B Chain B, Structures Of Mitd1
pdb|2YMB|C Chain C, Structures Of Mitd1
pdb|2YMB|D Chain D, Structures Of Mitd1
Length = 257
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Query: 303 IALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVL 362
I ++++A G + REY + T+TE++IE + H + NFL F
Sbjct: 100 IKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQ------------LYNFLRFCE 147
Query: 363 ALENKDTPEGLTYLFRSLD 381
L + +L SLD
Sbjct: 148 MLIKRPCKVKTIHLLTSLD 166
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 28.5 bits (62), Expect = 9.2, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 300 DMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFL- 358
+ F DKD +GT++ +EL +L + E + + + G +DF FL
Sbjct: 15 EAFSLFDKDGDGTITTKELGT-VXRSLGQNPTEAELQDXINEVDADGNGT--IDFPEFLT 71
Query: 359 DFVLALENKDTPEGLTYLFRSLDLQERGYLTTADIHSLFRDVHQK 403
++ D+ E + FR D GY++ A++ + ++ +K
Sbjct: 72 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 116
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,437,377
Number of Sequences: 62578
Number of extensions: 542099
Number of successful extensions: 1298
Number of sequences better than 100.0: 132
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 1226
Number of HSP's gapped (non-prelim): 188
length of query: 476
length of database: 14,973,337
effective HSP length: 102
effective length of query: 374
effective length of database: 8,590,381
effective search space: 3212802494
effective search space used: 3212802494
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)