Query 035582
Match_columns 268
No_of_seqs 154 out of 1220
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 06:34:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035582.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035582hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 8.7E-55 3E-59 406.5 27.4 251 1-265 39-348 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 8.8E-53 3E-57 391.0 22.5 255 1-265 38-333 (421)
3 2xr7_A Malonyltransferase; xen 100.0 9.1E-50 3.1E-54 373.8 22.5 254 2-263 36-365 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 4.7E-49 1.6E-53 369.1 25.2 249 2-264 41-361 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 9.4E-44 3.2E-48 332.6 18.8 252 1-265 19-351 (451)
6 3fot_A 15-O-acetyltransferase; 94.5 0.12 4.1E-06 48.6 8.6 86 150-235 279-365 (519)
7 1q9j_A PAPA5, polyketide synth 93.8 0.97 3.3E-05 40.1 13.0 102 149-256 212-314 (422)
8 2jgp_A Tyrocidine synthetase 3 92.4 3.3 0.00011 38.0 14.6 97 149-256 304-401 (520)
9 2xhg_A Tyrocidine synthetase A 92.0 5.2 0.00018 35.8 15.2 103 148-257 233-337 (466)
10 2vsq_A Surfactin synthetase su 90.7 17 0.00059 37.6 21.0 99 149-256 229-328 (1304)
11 1l5a_A Amide synthase, VIBH; n 90.5 8.7 0.0003 34.0 19.4 96 149-256 209-305 (436)
12 4hvm_A Tlmii; PSI-biology, mid 69.4 11 0.00037 34.1 7.2 103 148-256 215-328 (493)
13 2k1o_A Putative; repressor, tr 48.9 49 0.0017 21.0 5.2 44 148-198 15-58 (66)
14 2xl1_A Arginine attenuator pep 43.1 13 0.00044 19.0 1.5 17 174-190 7-23 (26)
15 1x93_A Hypothetical protein HP 34.1 81 0.0028 19.3 4.8 38 150-194 3-40 (55)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=8.7e-55 Score=406.53 Aligned_cols=251 Identities=21% Similarity=0.341 Sum_probs=216.2
Q ss_pred CcccEEEEecCCCCCCCCCCCccccchhhhHHHHHHHHHHHhhhcccCCceecC---CCeeEEecCCceEEEEEEecCCh
Q 035582 1 MYFPVALYYPINQDINLTSPTDIHRMISKRLQLLKQSLSETLARFHQFAGKLND---DNLSVDCKDKGIYFVESRVDSPL 77 (268)
Q Consensus 1 ~yi~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~L~~sLs~~L~~~~~LaGrl~~---g~~~i~~~~~Gv~f~~a~~~~~l 77 (268)
+|++.+|||+.++.. + ...+++ ||+||+++|++||||||||+. |+++|+||++||.|+||++|+++
T Consensus 39 ~~~~~~~~y~~~~~~---~-----~~~~~~---Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l 107 (439)
T 4g22_A 39 FHTPSVYFYRPTGSS---N-----FFDAKV---LKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVV 107 (439)
T ss_dssp TCCCEEEEECCCSCT---T-----TTCHHH---HHHHHHHHTTTTGGGGCEEEECTTSCEEEECCCCCEEEEEEEESSCG
T ss_pred cceeeEEEEcCCCCc---c-----ccHHHH---HHHHHHHHHhhccccceeeeeCCCCCEEEEECCCCCEEEEEEcCCcH
Confidence 589999999865432 2 456899 999999999999999999984 89999999999999999999999
Q ss_pred hhhcCCCChHHhhcccccc-----CCCce-eEEEEeeeecCceeee----------------HHHHHHHHccCCCCCCCC
Q 035582 78 NEFLNQPDLFLINKLLRSE-----AGIRV-AKIQVTTFECSGLIIT----------------FKNWAATACKNTEAAICP 135 (268)
Q Consensus 78 ~~l~~~~~~~~~~~l~p~~-----~~~~P-l~vQvt~f~cGG~~lg----------------l~~Wa~~~rg~~~~~~~P 135 (268)
+|+.+..+...+++|+|.. ..+.| +.||||+|+|||++|| +++||++|||... ..+|
T Consensus 108 ~~l~~~~p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~~-~~~P 186 (439)
T 4g22_A 108 DDFGDFAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLDV-TLPP 186 (439)
T ss_dssp GGGTTCCCCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHTTCCC-SSCC
T ss_pred HHhcCCCCCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhCCCCC-CCCC
Confidence 9997632334567788754 24679 9999999999999999 9999999999753 5678
Q ss_pred CCCccccc---C--------------------------C-CCccEEEEEECHHHHHHHHHHhhcCC-CCCCChhhhHHHH
Q 035582 136 NNDVSYLF---P--------------------------Q-NNDATRRFVFDAKAIATLKAKATSSW-VQNPTRAEAAPAV 184 (268)
Q Consensus 136 ~~dr~~~~---p--------------------------~-~~~~~~~f~fs~~~i~~Lk~~a~~~~-~~~~St~d~l~A~ 184 (268)
.+||+.+. | + .++..+.|+|++++|++||+++.++. ..++||||+|+||
T Consensus 187 ~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~ 266 (439)
T 4g22_A 187 FIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGH 266 (439)
T ss_dssp BCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHH
T ss_pred ccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHH
Confidence 88875431 1 0 24678899999999999999998653 4689999999999
Q ss_pred HHHHHHHHhcCCCCCCcceEEEEEecCcCCCCCCCCcCccccceecceeeecCCC---ccHHHHHHHHHHHHHhchHHHH
Q 035582 185 LCKSIIAAFKAKSSSLKPTLLTHLVNLRRKARPPLSEYSMGKIVWMANALCTDDE---PELDSLVCLLREAIKKIDGDFM 261 (268)
Q Consensus 185 lW~~~~rar~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v~~~~~~~~~~e---~~l~~~A~~Ir~~i~~~~~~~~ 261 (268)
+|+|++|||+..+ ++++.+.++||+|+|++||+|++||||++..+.+.++++| .+|+++|.+||++|+++|+||+
T Consensus 267 iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~ 344 (439)
T 4g22_A 267 VWRCACKARGLEV--DQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYL 344 (439)
T ss_dssp HHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHH
T ss_pred HHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHH
Confidence 9999999998754 5889999999999999999999999999999999988887 6999999999999999999999
Q ss_pred hhhc
Q 035582 262 KSLQ 265 (268)
Q Consensus 262 ~s~~ 265 (268)
++++
T Consensus 345 ~~~~ 348 (439)
T 4g22_A 345 RSAL 348 (439)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=8.8e-53 Score=391.02 Aligned_cols=255 Identities=34% Similarity=0.547 Sum_probs=217.0
Q ss_pred CcccEEEEecCCCCCCCCCCCccccchhhhHHHHHHHHHHHhhhcccCCceecCCCeeEEecCCceEEEEEEecCChhhh
Q 035582 1 MYFPVALYYPINQDINLTSPTDIHRMISKRLQLLKQSLSETLARFHQFAGKLNDDNLSVDCKDKGIYFVESRVDSPLNEF 80 (268)
Q Consensus 1 ~yi~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~L~~sLs~~L~~~~~LaGrl~~g~~~i~~~~~Gv~f~~a~~~~~l~~l 80 (268)
.|++.+|||+.++... .+. ..++++ ||+||+++|++||||||||+ ++++|+||++||.|++|++|++++|+
T Consensus 38 ~~~~~~~~y~~~~~~~-~~~----~~~~~~---Lk~sLs~~L~~~~plAGRl~-~~~~i~c~~~Gv~fv~A~~d~~l~~~ 108 (421)
T 2bgh_A 38 CHIPFILFYPNPLDSN-LDP----AQTSQH---LKQSLSKVLTHFYPLAGRIN-VNSSVDCNDSGVPFVEARVQAQLSQA 108 (421)
T ss_dssp SEEEEEEEECCCSSCC-CCH----HHHHHH---HHHHHHHHTTTSGGGGSEEE-TTTEEECCCCCEEEEEEEESSCHHHH
T ss_pred cccceEEEEeCCCccc-cch----hhHHHH---HHHHHHHHhhhcchhccccC-CCcEEEEcCCceEEEEEEEcCCHHHH
Confidence 4899999998654310 012 568899 99999999999999999998 57999999999999999999999999
Q ss_pred cCC-CChHHhhcccccc--------CCCce-eEEEEeeeecCceeee----------------HHHHHHHHccCCCCCCC
Q 035582 81 LNQ-PDLFLINKLLRSE--------AGIRV-AKIQVTTFECSGLIIT----------------FKNWAATACKNTEAAIC 134 (268)
Q Consensus 81 ~~~-~~~~~~~~l~p~~--------~~~~P-l~vQvt~f~cGG~~lg----------------l~~Wa~~~rg~~~~~~~ 134 (268)
.+. |+...++.|+|.. ..+.| +.||||+|+|||++|| +++||++|||...+ ++
T Consensus 109 ~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~-~~ 187 (421)
T 2bgh_A 109 IQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETEI-VL 187 (421)
T ss_dssp HSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCSCC-CC
T ss_pred hccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHhcCCCCC-CC
Confidence 865 6655677888754 13579 9999999999999999 99999999997543 67
Q ss_pred CCCCc-ccccCC------------CCccEEEEEECHHHHHHHHHHhhcCCC-CCCChhhhHHHHHHHHHHHHhcCCCCCC
Q 035582 135 PNNDV-SYLFPQ------------NNDATRRFVFDAKAIATLKAKATSSWV-QNPTRAEAAPAVLCKSIIAAFKAKSSSL 200 (268)
Q Consensus 135 P~~dr-~~~~p~------------~~~~~~~f~fs~~~i~~Lk~~a~~~~~-~~~St~d~l~A~lW~~~~rar~~~~~~~ 200 (268)
|.+|| ..+.|+ .++..+.|+|++++|++||+.+.++.. .++|+||+|+||+|+|++|||....+.+
T Consensus 188 P~~dr~~~l~p~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~ 267 (421)
T 2bgh_A 188 PNFDLAARHFPPVDNTPSPELVPDENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAK 267 (421)
T ss_dssp CBCSHHHHHSCCCTTCCCCCCCCCSSEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CccccccccCCCcccCCCCccCCccceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCC
Confidence 89999 655543 257899999999999999999976543 6899999999999999999987533335
Q ss_pred cceEEEEEecCcCCCCCCCCcCccccceecceeeecCCC-ccHHHHHHHHHHHHHhchHHHHhhhc
Q 035582 201 KPTLLTHLVNLRRKARPPLSEYSMGKIVWMANALCTDDE-PELDSLVCLLREAIKKIDGDFMKSLQ 265 (268)
Q Consensus 201 ~~~~l~~~vd~R~r~~p~lp~~y~GN~v~~~~~~~~~~e-~~l~~~A~~Ir~~i~~~~~~~~~s~~ 265 (268)
+++.+.++||+|+|++||+|++||||++..+.+.+++++ .+|+++|.+||++|.++|++|++++.
T Consensus 268 ~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~~~~l~~~a~~ir~ai~~~~~~~~~~~~ 333 (421)
T 2bgh_A 268 NKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELL 333 (421)
T ss_dssp SCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTCCCCGGGGHHHHHHHTCCCSSCHHHHHH
T ss_pred CceEEEEEecCccccCCCCCCCccceEEEEEEEEecccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999888876 79999999999999999999988764
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=9.1e-50 Score=373.78 Aligned_cols=254 Identities=19% Similarity=0.203 Sum_probs=209.7
Q ss_pred cccEEEEecCCCCCCCCCCCccccchhhhHHHHHHHHHHHhhhcccCCceec-----CCCeeEEec-CCceEEEEEEecC
Q 035582 2 YFPVALYYPINQDINLTSPTDIHRMISKRLQLLKQSLSETLARFHQFAGKLN-----DDNLSVDCK-DKGIYFVESRVDS 75 (268)
Q Consensus 2 yi~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~L~~sLs~~L~~~~~LaGrl~-----~g~~~i~~~-~~Gv~f~~a~~~~ 75 (268)
|++.+|||+.++.. +. +++.++++ ||+||+++|++||||||||+ .|+++|+|+ ++||.|+||+++.
T Consensus 36 ~~~~~~~y~~~~~~---~~--~~~~~~~~---Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~ 107 (453)
T 2xr7_A 36 RMRRILFYKLPISR---PD--FVQTIIPT---LKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDM 107 (453)
T ss_dssp CEEEEEEEECCCCS---HH--HHHTHHHH---HHHHHHHHHTTSGGGGSCCEEESSTTCCCEEEEETTCCCEEEEEECCS
T ss_pred CccEEEEEeCCCCC---ch--hHHHHHHH---HHHHHHHHhhhccccCeeEEccCCCCCCEEEEecCCCceEEEEEecCC
Confidence 89999999865431 10 01567899 99999999999999999995 368999999 5999999999999
Q ss_pred ChhhhcCC--CChHHhhcccccc---CCC-----ce-eEEEEeeeecCceeee----------------HHHHHHHHc-c
Q 035582 76 PLNEFLNQ--PDLFLINKLLRSE---AGI-----RV-AKIQVTTFECSGLIIT----------------FKNWAATAC-K 127 (268)
Q Consensus 76 ~l~~l~~~--~~~~~~~~l~p~~---~~~-----~P-l~vQvt~f~cGG~~lg----------------l~~Wa~~~r-g 127 (268)
+++|+... .+...++.|+|.. ... .| +.||||+|+|||++|| +++||++|| |
T Consensus 108 ~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G 187 (453)
T 2xr7_A 108 DFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFG 187 (453)
T ss_dssp CHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTT
T ss_pred CHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhcC
Confidence 99999752 2345567888864 122 89 9999999999999999 999999999 7
Q ss_pred C-C---CCCCCCCCCcccccC--------------------------CCCccEEEEEECHHHHHHHHHHhhcCCC--CCC
Q 035582 128 N-T---EAAICPNNDVSYLFP--------------------------QNNDATRRFVFDAKAIATLKAKATSSWV--QNP 175 (268)
Q Consensus 128 ~-~---~~~~~P~~dr~~~~p--------------------------~~~~~~~~f~fs~~~i~~Lk~~a~~~~~--~~~ 175 (268)
. . .+..+|.+||+.+.+ +.++..+.|+|++++|++||+.+.++.. .++
T Consensus 188 ~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~ 267 (453)
T 2xr7_A 188 GDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHV 267 (453)
T ss_dssp TCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCC
T ss_pred CCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccccccccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcc
Confidence 6 2 134568888764431 1235688999999999999999976542 689
Q ss_pred ChhhhHHHHHHHHHHHHhcCC--C-CCCcceEEEEEecCcCCCCCCCCcCccccceecceeeecCCC----ccHHHHHHH
Q 035582 176 TRAEAAPAVLCKSIIAAFKAK--S-SSLKPTLLTHLVNLRRKARPPLSEYSMGKIVWMANALCTDDE----PELDSLVCL 248 (268)
Q Consensus 176 St~d~l~A~lW~~~~rar~~~--~-~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v~~~~~~~~~~e----~~l~~~A~~ 248 (268)
|+||+|+||+|+|++|||... . ++++++.+.++||+|+|++||+|++||||++..+.+.++++| .+|+++|.+
T Consensus 268 St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~ 347 (453)
T 2xr7_A 268 TSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVEL 347 (453)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHH
Confidence 999999999999999999752 0 225789999999999999999999999999999998888864 689999999
Q ss_pred HHHHHHh--chHH-HHhh
Q 035582 249 LREAIKK--IDGD-FMKS 263 (268)
Q Consensus 249 Ir~~i~~--~~~~-~~~s 263 (268)
||++|.+ .|++ |+++
T Consensus 348 Ir~ai~~~~~~~e~~~~~ 365 (453)
T 2xr7_A 348 IGEAIRKRMKDEEWILSG 365 (453)
T ss_dssp HHHHHTTSSSCHHHHHSS
T ss_pred HHHHHHhhccCCccchhh
Confidence 9999999 5788 9885
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=4.7e-49 Score=369.08 Aligned_cols=249 Identities=20% Similarity=0.236 Sum_probs=207.0
Q ss_pred cccEEEEecCCCCCCCCCCCccccchhhhHHHHHHHHHHHhhhcccCCceec-C----CCeeEEec-CCceEEEEEEecC
Q 035582 2 YFPVALYYPINQDINLTSPTDIHRMISKRLQLLKQSLSETLARFHQFAGKLN-D----DNLSVDCK-DKGIYFVESRVDS 75 (268)
Q Consensus 2 yi~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~L~~sLs~~L~~~~~LaGrl~-~----g~~~i~~~-~~Gv~f~~a~~~~ 75 (268)
|++.+|||+.++.. +. +.+.++++ ||+||+++|++||||||||+ . |+++|+|+ ++||.|+||+++.
T Consensus 41 ~~~~~~~y~~~~~~---~~--~~~~~~~~---Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~ 112 (454)
T 2e1v_A 41 PINNLFFYELPITR---SQ--FTETVVPN---IKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNL 112 (454)
T ss_dssp CEEEEEEEECCCCH---HH--HHHTHHHH---HHHHHHHHHTTCGGGGSEEEECSSSSSCCEEEECTTCCEEEEEEEECS
T ss_pred CccEEEEEeCCCCc---ch--hhHHHHHH---HHHHHHHHhhhccccceeeeeccCCCCCEEEEECCCCcEEEEEEEeCC
Confidence 89999999865431 10 01467899 99999999999999999998 3 78999999 5999999999999
Q ss_pred ChhhhcCC-C-ChHHhhccccccC--------CCce-eEEEEeeeecCceeee----------------HHHHHHHHc-c
Q 035582 76 PLNEFLNQ-P-DLFLINKLLRSEA--------GIRV-AKIQVTTFECSGLIIT----------------FKNWAATAC-K 127 (268)
Q Consensus 76 ~l~~l~~~-~-~~~~~~~l~p~~~--------~~~P-l~vQvt~f~cGG~~lg----------------l~~Wa~~~r-g 127 (268)
+++|+... + +...++.|+|... .+.| +.||||+|+|||++|| +++||++|| |
T Consensus 113 ~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g 192 (454)
T 2e1v_A 113 DLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSG 192 (454)
T ss_dssp CGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred CHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccC
Confidence 99999653 2 3345677887641 2349 9999999999999999 999999999 7
Q ss_pred CC-----CCCCCCCCCccccc---------------------------CCCCccEEEEEECHHHHHHHHHHhhcCCC--C
Q 035582 128 NT-----EAAICPNNDVSYLF---------------------------PQNNDATRRFVFDAKAIATLKAKATSSWV--Q 173 (268)
Q Consensus 128 ~~-----~~~~~P~~dr~~~~---------------------------p~~~~~~~~f~fs~~~i~~Lk~~a~~~~~--~ 173 (268)
.. .+..+|.+|| .+. ++.+...+.|+|++++|++||+++.++.. .
T Consensus 193 ~~~~~~~~~~~~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~ 271 (454)
T 2e1v_A 193 NNDESFLANGTRPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLE 271 (454)
T ss_dssp SCCHHHHHHSCCCBCCC-CCCCHHHHHHHHHHTTCTTHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCS
T ss_pred CCccccCCCCCCCcccc-cCCCCCcchHHHHhhhccccccccCcccCCCCCCceEEEEEECHHHHHHHHHHHhhcCCCCC
Confidence 52 1245688888 432 12246789999999999999999976542 5
Q ss_pred CCChhhhHHHHHHHHHHHHhcCCCCCCcceEEEEEecCcCCCCCCCCcCccccceecceeeecCCC----ccHHHHHHHH
Q 035582 174 NPTRAEAAPAVLCKSIIAAFKAKSSSLKPTLLTHLVNLRRKARPPLSEYSMGKIVWMANALCTDDE----PELDSLVCLL 249 (268)
Q Consensus 174 ~~St~d~l~A~lW~~~~rar~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v~~~~~~~~~~e----~~l~~~A~~I 249 (268)
++|+||+|+||+|+|++||| + ++++.+.++||+|+|++||+|++||||++..+.+.++++| .+|+++|.+|
T Consensus 272 ~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~I 346 (454)
T 2e1v_A 272 YVSSFTVACAYIWSCIAKSR---N--DKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLI 346 (454)
T ss_dssp CCCHHHHHHHHHHHHHHHHH---C--CSEEEEEEEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhhc---C--CCceEEEEEecchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHH
Confidence 89999999999999999999 2 5789999999999999999999999999999999888886 5899999999
Q ss_pred HHHHHhchHHHHhhh
Q 035582 250 REAIKKIDGDFMKSL 264 (268)
Q Consensus 250 r~~i~~~~~~~~~s~ 264 (268)
|++|.+++++|+++.
T Consensus 347 r~ai~~~~~~~~~~~ 361 (454)
T 2e1v_A 347 GENLHKTLTDYKDGV 361 (454)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHhhhhhhhHHH
Confidence 999999986666554
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=9.4e-44 Score=332.62 Aligned_cols=252 Identities=18% Similarity=0.185 Sum_probs=194.8
Q ss_pred CcccEEEEecCCCCCCCCCCCccccchhhhHHHHHHHHHHHhhhcccCCceecC--------CCeeEEecCCceEEEEEE
Q 035582 1 MYFPVALYYPINQDINLTSPTDIHRMISKRLQLLKQSLSETLARFHQFAGKLND--------DNLSVDCKDKGIYFVESR 72 (268)
Q Consensus 1 ~yi~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~L~~sLs~~L~~~~~LaGrl~~--------g~~~i~~~~~Gv~f~~a~ 72 (268)
+|++.+|||+.++.. +. ++++++ ||+||+++|++||||||||+. |+++|+|++.++.|++++
T Consensus 19 ~y~~~~~~y~~~~~~---~~----~~~~~~---Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~~~va~ 88 (451)
T 2rkv_A 19 IYTQISLLYPVSDSS---QY----PTIVST---FEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPRVVVKD 88 (451)
T ss_dssp CEEEEEEEEECSCGG---GH----HHHHHH---HHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCEEEEEE
T ss_pred cceeEEEEEECCCCC---CH----HHHHHH---HHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCeEEEEe
Confidence 489999999854321 22 667899 999999999999999999863 679999887777799988
Q ss_pred ecC-----ChhhhcC-CCChHHhh--cc-----cccc-----CCCce-eEEEEeeeecCceeee----------------
Q 035582 73 VDS-----PLNEFLN-QPDLFLIN--KL-----LRSE-----AGIRV-AKIQVTTFECSGLIIT---------------- 117 (268)
Q Consensus 73 ~~~-----~l~~l~~-~~~~~~~~--~l-----~p~~-----~~~~P-l~vQvt~f~cGG~~lg---------------- 117 (268)
++. +++++.. ..+...++ .| +|.. ..+.| +.|||| |.|||++||
T Consensus 89 ~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v~Dg~g~~~F 167 (451)
T 2rkv_A 89 LRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGAMDMVGQDAV 167 (451)
T ss_dssp CTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTTCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhccccHHHHHHH
Confidence 864 5777753 22111111 23 2311 23489 999999 558999999
Q ss_pred HHHHHHHHccCCCCC---CCCCCCcccccC----------------------------CCCccEEEEEECHHHHHHHHHH
Q 035582 118 FKNWAATACKNTEAA---ICPNNDVSYLFP----------------------------QNNDATRRFVFDAKAIATLKAK 166 (268)
Q Consensus 118 l~~Wa~~~rg~~~~~---~~P~~dr~~~~p----------------------------~~~~~~~~f~fs~~~i~~Lk~~ 166 (268)
+++||++|||...+. .+|.+||+.+.| +.++..+.|+|++++|++||++
T Consensus 168 l~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~ 247 (451)
T 2rkv_A 168 IRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAMSELKDA 247 (451)
T ss_dssp HHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHHHHHHHHH
Confidence 999999999964211 134555432111 1146789999999999999999
Q ss_pred hhcCC---CCCCChhhhHHHHHHHHHHHHhcCCCCCCcceEEEEEecCcCCCCCCCCcCccccceecceeeecCCC---c
Q 035582 167 ATSSW---VQNPTRAEAAPAVLCKSIIAAFKAKSSSLKPTLLTHLVNLRRKARPPLSEYSMGKIVWMANALCTDDE---P 240 (268)
Q Consensus 167 a~~~~---~~~~St~d~l~A~lW~~~~rar~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v~~~~~~~~~~e---~ 240 (268)
+.++. ..++|+||+|+||+|+|++|||....++++++.+.++||+|+|++ +|++||||++..+.+.++++| .
T Consensus 248 a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~~~~el~~~ 325 (451)
T 2rkv_A 248 ATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHNSTIGEIANE 325 (451)
T ss_dssp HHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEEEEHHHHHHS
T ss_pred HhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeecccCcHHHhccc
Confidence 98654 367999999999999999999821112368899999999999998 899999999999998888877 7
Q ss_pred cHHHHHHHHHHHHHhchHHH-Hhhhc
Q 035582 241 ELDSLVCLLREAIKKIDGDF-MKSLQ 265 (268)
Q Consensus 241 ~l~~~A~~Ir~~i~~~~~~~-~~s~~ 265 (268)
+|+++|.+||++|.+++++| ++++.
T Consensus 326 ~L~~~a~~ir~ai~~~~~~~~~~~~~ 351 (451)
T 2rkv_A 326 SLGATASRLRSELDPASMRQRTRGLA 351 (451)
T ss_dssp CHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcccCchhHHHHHH
Confidence 99999999999999999999 87653
No 6
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=94.46 E-value=0.12 Score=48.58 Aligned_cols=86 Identities=12% Similarity=-0.011 Sum_probs=60.9
Q ss_pred EEEEEECHHHHHHHHHHhhcCCCCCCChhhhHHHHHHHHHHHHhcC-CCCCCcceEEEEEecCcCCCCCCCCcCccccce
Q 035582 150 TRRFVFDAKAIATLKAKATSSWVQNPTRAEAAPAVLCKSIIAAFKA-KSSSLKPTLLTHLVNLRRKARPPLSEYSMGKIV 228 (268)
Q Consensus 150 ~~~f~fs~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~rar~~-~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v 228 (268)
...+.|++++.++|++.|....++.+|-..++.|.+-.++.+.... ...........++||+|+.+.++.-.+|||.++
T Consensus 279 ~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~ 358 (519)
T 3fot_A 279 CVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQ 358 (519)
T ss_dssp EEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCE
T ss_pred eEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceee
Confidence 4578899999999999998765557888888877665655553211 011134678999999999998765567888877
Q ss_pred ecceeee
Q 035582 229 WMANALC 235 (268)
Q Consensus 229 ~~~~~~~ 235 (268)
....+..
T Consensus 359 ~~~~~~v 365 (519)
T 3fot_A 359 TAAVVRI 365 (519)
T ss_dssp EEEEEEE
T ss_pred eeeeeEe
Confidence 6555443
No 7
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=93.84 E-value=0.97 Score=40.07 Aligned_cols=102 Identities=13% Similarity=0.100 Sum_probs=68.0
Q ss_pred cEEEEEECHHHHHHHHHHhhcCCCCCCChhhhHHHHHHHHHHHHhcCCCCCCcceEEEEEecCcCCCCCCCCcCccccce
Q 035582 149 ATRRFVFDAKAIATLKAKATSSWVQNPTRAEAAPAVLCKSIIAAFKAKSSSLKPTLLTHLVNLRRKARPPLSEYSMGKIV 228 (268)
Q Consensus 149 ~~~~f~fs~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~rar~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v 228 (268)
....+.++.+..++|++.+... .+|.+.++.|.+-..+.|.+.. . .....+.++++.|....|+++..=+.|.+
T Consensus 212 ~~~~~~l~~~~~~~l~~~a~~~---~~t~~~~l~aa~~~~l~r~~~~-~--~~~v~~g~~~~~R~~~~~~~~~~~~~~~v 285 (422)
T 1q9j_A 212 PVTRLWLSKQQTSDLMAFGREH---RLSLNAVVAAAILLTEWQLRNT-P--HVPIPYVYPVDLRFVLAPPVAPTEATNLL 285 (422)
T ss_dssp CEEEECCCHHHHHHHHHHHTTT---TCCHHHHHHHHHHHHHHHHHTC-S--SCCEEEEEEEETTTTSSSCCCTTTBSCCE
T ss_pred cceEEEeCHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHhcccC-C--CceEEEeeeeecccccCCCCChhhhhhhh
Confidence 4577889999999999998753 5888999988776666665222 1 36788899999999876554311123333
Q ss_pred ecceeeecCCC-ccHHHHHHHHHHHHHhc
Q 035582 229 WMANALCTDDE-PELDSLVCLLREAIKKI 256 (268)
Q Consensus 229 ~~~~~~~~~~e-~~l~~~A~~Ir~~i~~~ 256 (268)
.+....++... .++.+++..+++.+.+.
T Consensus 286 G~f~n~lp~~~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 286 GAASYLAEIGPNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp EEEEEEECCCSSCCHHHHHHHHHHHHHHH
T ss_pred eeeeeeeeccCCCCHHHHHHHHHHHHHHH
Confidence 22222334433 46778888888777653
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=92.37 E-value=3.3 Score=37.97 Aligned_cols=97 Identities=9% Similarity=-0.033 Sum_probs=68.3
Q ss_pred cEEEEEECHHHHHHHHHHhhcCCCCCCChhhhHHHHHHHHHHHHhcCCCCCCcceEEEEEecCcCCCCCCCCcCccccce
Q 035582 149 ATRRFVFDAKAIATLKAKATSSWVQNPTRAEAAPAVLCKSIIAAFKAKSSSLKPTLLTHLVNLRRKARPPLSEYSMGKIV 228 (268)
Q Consensus 149 ~~~~f~fs~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~rar~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v 228 (268)
....+.++.+..++|++.+... .+|.+.++.|.+-..+.+-.+ .....+.++++.|...+ -.+.+|+.+
T Consensus 304 ~~~~~~l~~~~~~~l~~~a~~~---~~T~~~~l~aa~a~~L~~~~~-----~~dv~~g~~~~gR~~~~---~~~~vG~f~ 372 (520)
T 2jgp_A 304 DQCTIGAGKALTEGLHQLAQAT---GTTLYMVLLAAYNVLLAKYAG-----QEDIIVGTPITGRSHAD---LEPIVGMFV 372 (520)
T ss_dssp EEEEEECCHHHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHHHHT-----CSCEEEEEEECCCCSGG---GTTCCSCCC
T ss_pred cEEEEeCCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC-----CCCeEEEeccCCCCchh---hhccEEeee
Confidence 4567889999999999988653 478888888866666655543 25688999999997521 245667766
Q ss_pred ecceeeecCCC-ccHHHHHHHHHHHHHhc
Q 035582 229 WMANALCTDDE-PELDSLVCLLREAIKKI 256 (268)
Q Consensus 229 ~~~~~~~~~~e-~~l~~~A~~Ir~~i~~~ 256 (268)
-..-.+..... .++.+++..+++.+.+.
T Consensus 373 n~lplr~~~~~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 373 NTLAMRNKPQREKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp EEEEEEECCCTTSBHHHHHHHHHHHHHHH
T ss_pred eeeeEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 55555555443 57888888888877553
No 9
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=91.98 E-value=5.2 Score=35.85 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=71.1
Q ss_pred ccEEEEEECHHHHHHHHHHhhcCCCCCCChhhhHHHHHHHHHHHHhcCCCCCCcceEEEEEecCcCCCCC-CCCcCcccc
Q 035582 148 DATRRFVFDAKAIATLKAKATSSWVQNPTRAEAAPAVLCKSIIAAFKAKSSSLKPTLLTHLVNLRRKARP-PLSEYSMGK 226 (268)
Q Consensus 148 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~rar~~~~~~~~~~~l~~~vd~R~r~~p-~lp~~y~GN 226 (268)
.....+.++.+..++|++.+... ..+|.++++.|.+-..+.+..+ .....+.++++.|....+ +--.+-+|+
T Consensus 233 ~~~~~~~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~~~~~~~~~~~~vG~ 305 (466)
T 2xhg_A 233 VRNMRIRLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGREDIIEQANVARTVGW 305 (466)
T ss_dssp EEEEEEECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCCSCSTTCCCTTCCSC
T ss_pred ceEEEEEcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCCccccCCCccccccc
Confidence 34567889999999998876432 2468888888876666666543 256788999999986421 112456677
Q ss_pred ceecceeeecCCC-ccHHHHHHHHHHHHHhch
Q 035582 227 IVWMANALCTDDE-PELDSLVCLLREAIKKID 257 (268)
Q Consensus 227 ~v~~~~~~~~~~e-~~l~~~A~~Ir~~i~~~~ 257 (268)
.+-..-....... .++.+++..|++.+..+.
T Consensus 306 f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 306 FTSQYPVLLDLKQTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp CCEEEEEEEECSCCCSHHHHHHHHHHHHHHSG
T ss_pred eeeeccEEEecCCCCCHHHHHHHHHHHHHhCc
Confidence 6655444555443 678899999999887763
No 10
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=90.72 E-value=17 Score=37.60 Aligned_cols=99 Identities=16% Similarity=0.049 Sum_probs=68.7
Q ss_pred cEEEEEECHHHHHHHHHHhhcCCCCCCChhhhHHHHHHHHHHHHhcCCCCCCcceEEEEEecCcCCCCCCCCcCccccce
Q 035582 149 ATRRFVFDAKAIATLKAKATSSWVQNPTRAEAAPAVLCKSIIAAFKAKSSSLKPTLLTHLVNLRRKARPPLSEYSMGKIV 228 (268)
Q Consensus 149 ~~~~f~fs~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~rar~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v 228 (268)
....|.++++..++||+.+... .+|-+.++.|.+-..+.|-.+ .+...+..+++.|....+.+ ++.+|+.+
T Consensus 229 ~~~~~~l~~~~~~~L~~~a~~~---~~T~~~vllaa~a~~L~r~tg-----~~dvv~G~pvsgR~~~~~~~-~~~vG~fv 299 (1304)
T 2vsq_A 229 KELLFSPSEAETKAFTELAKSQ---HTTLSTALQAVWSVLISRYQQ-----SGDLAFGTVVSGRPAEIKGV-EHMVGLFI 299 (1304)
T ss_dssp EEEEECCCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHHT-----CSEEEEEEEECCCCTTSTTG-GGCCSSCC
T ss_pred ceEEEecCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC-----CCCEEEEEEeCCCCccchhh-hcccccce
Confidence 3456789999999999998764 478888888865555555543 25688999999997643322 45566665
Q ss_pred ecceeeecCCC-ccHHHHHHHHHHHHHhc
Q 035582 229 WMANALCTDDE-PELDSLVCLLREAIKKI 256 (268)
Q Consensus 229 ~~~~~~~~~~e-~~l~~~A~~Ir~~i~~~ 256 (268)
-..-.+..... .++.++...+++...+.
T Consensus 300 ntlplr~~~~~~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 300 NVVPRRVKLSEGITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCcHHHHHHHHHHHHHHh
Confidence 54444555443 67888888888877553
No 11
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=90.55 E-value=8.7 Score=33.95 Aligned_cols=96 Identities=14% Similarity=0.057 Sum_probs=67.4
Q ss_pred cEEEEEECHHHHHHHHHHhhcCCCCCCChhhhHHHHHHHHHHHHhcCCCCCCcceEEEEEecCcCCCCCCCCcCccccce
Q 035582 149 ATRRFVFDAKAIATLKAKATSSWVQNPTRAEAAPAVLCKSIIAAFKAKSSSLKPTLLTHLVNLRRKARPPLSEYSMGKIV 228 (268)
Q Consensus 149 ~~~~f~fs~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~rar~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~v 228 (268)
....+.++.+..++|++.+... .+|.+.++.|.+-..+.+-.+ ....+.+++++|..- --.+.+|+.+
T Consensus 209 ~~~~~~l~~~~~~~l~~~a~~~---~~t~~~~l~aa~~~~L~~~~g------~dv~ig~~~~~R~~~---~~~~~vG~f~ 276 (436)
T 1l5a_A 209 VSLSYTLNSQLNHLLLKLANAN---QIGWPDALVALCALYLESAEP------DAPWLWLPFMNRWGS---VAANVPGLMV 276 (436)
T ss_dssp EEEEEECCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHST------TCCEEEEEECCCTTS---GGGGSCSCCC
T ss_pred eeeEEecCHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHhhC------CceEEeeecccCCCh---HHhcCcceEE
Confidence 4667889999999999998764 578888888876555555432 357889999999752 2245667765
Q ss_pred ecceeeecCCC-ccHHHHHHHHHHHHHhc
Q 035582 229 WMANALCTDDE-PELDSLVCLLREAIKKI 256 (268)
Q Consensus 229 ~~~~~~~~~~e-~~l~~~A~~Ir~~i~~~ 256 (268)
-..-....... .++.+++..+++.+.+.
T Consensus 277 n~lplr~~~~~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 277 NSLPLLRLSAQQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp EEEEEECCCCTTCBHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 55444554443 57888888888877654
No 12
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=69.42 E-value=11 Score=34.15 Aligned_cols=103 Identities=15% Similarity=0.036 Sum_probs=61.5
Q ss_pred ccEEEEEECHHHHHHHHHHhhcCCCCCCC--hhhhHHHHHHHHHHHHhcC------CCCCCcceEEEEEecCcCCCCCCC
Q 035582 148 DATRRFVFDAKAIATLKAKATSSWVQNPT--RAEAAPAVLCKSIIAAFKA------KSSSLKPTLLTHLVNLRRKARPPL 219 (268)
Q Consensus 148 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~~S--t~d~l~A~lW~~~~rar~~------~~~~~~~~~l~~~vd~R~r~~p~l 219 (268)
.....+.++.+..++|++.+... .+| .+.++.|.+-..+.+-+.. .........+.+++++|..- -
T Consensus 215 ~~~~~~~l~~~~~~~l~~~a~~~---~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~---~ 288 (493)
T 4hvm_A 215 PETSRLRVPGSRWQALTEPGGPL---GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL---Q 288 (493)
T ss_dssp CEEEEEEEEHHHHHHHHCC---------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT---T
T ss_pred CeeEEEEcCHHHHHHHHHHHHHc---CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc---c
Confidence 34567889999999998877643 578 8888888665555554110 00113678899999999762 2
Q ss_pred CcCccccceecceeeecCC---CccHHHHHHHHHHHHHhc
Q 035582 220 SEYSMGKIVWMANALCTDD---EPELDSLVCLLREAIKKI 256 (268)
Q Consensus 220 p~~y~GN~v~~~~~~~~~~---e~~l~~~A~~Ir~~i~~~ 256 (268)
-.+.+|+++-..-..+... +.++.+++..+++.+.+.
T Consensus 289 ~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 289 LGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp CCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHH
T ss_pred hhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHH
Confidence 3466777765544444433 356778888777766543
No 13
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=48.94 E-value=49 Score=21.00 Aligned_cols=44 Identities=14% Similarity=0.205 Sum_probs=35.7
Q ss_pred ccEEEEEECHHHHHHHHHHhhcCCCCCCChhhhHHHHHHHHHHHHhcCCCC
Q 035582 148 DATRRFVFDAKAIATLKAKATSSWVQNPTRAEAAPAVLCKSIIAAFKAKSS 198 (268)
Q Consensus 148 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~rar~~~~~ 198 (268)
.....|+||.|+-+.|.+.|.++ .|.+..++=|.+.++.....+
T Consensus 15 ~~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l~ykkg 58 (66)
T 2k1o_A 15 NFSVTFYLSKEEHDVLRRLADEE-------VESVNSFVKRHILKTIIYKKG 58 (66)
T ss_dssp CEEEEEEEEHHHHHHHHHHHHTT-------CSCHHHHHHHHHHHHHCSSCS
T ss_pred ceEEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcC
Confidence 34568999999999999999864 567888999999998776543
No 14
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=43.13 E-value=13 Score=18.99 Aligned_cols=17 Identities=12% Similarity=0.008 Sum_probs=13.9
Q ss_pred CCChhhhHHHHHHHHHH
Q 035582 174 NPTRAEAAPAVLCKSII 190 (268)
Q Consensus 174 ~~St~d~l~A~lW~~~~ 190 (268)
-.++.|-++-++|+++.
T Consensus 7 vftsqdylsdhlwraln 23 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALN 23 (26)
T ss_pred eeecHHHHHHHHHHHHh
Confidence 35678899999999875
No 15
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=34.06 E-value=81 Score=19.25 Aligned_cols=38 Identities=16% Similarity=0.273 Sum_probs=30.1
Q ss_pred EEEEEECHHHHHHHHHHhhcCCCCCCChhhhHHHHHHHHHHHHhc
Q 035582 150 TRRFVFDAKAIATLKAKATSSWVQNPTRAEAAPAVLCKSIIAAFK 194 (268)
Q Consensus 150 ~~~f~fs~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~rar~ 194 (268)
...|+||.++-+.|++.|.++ .|.+..++=|.+.++..
T Consensus 3 ~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~lr 40 (55)
T 1x93_A 3 AVSLYFSDEQYQKLEKMANEE-------EESVGSYIKRYILKALR 40 (55)
T ss_dssp EEEEEECHHHHHHHHHHHHHT-------TSCTTHHHHHHHHHHHT
T ss_pred eEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 457999999999999999864 45566777788877753
Done!