Query 035593
Match_columns 269
No_of_seqs 306 out of 2441
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 06:43:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035593.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035593hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 1.6E-33 5.6E-38 246.3 20.1 214 8-243 25-247 (294)
2 3gjy_A Spermidine synthase; AP 100.0 4.5E-31 1.6E-35 233.8 22.2 213 19-253 29-264 (317)
3 3c6k_A Spermine synthase; sper 100.0 6E-29 2.1E-33 223.5 18.3 188 10-221 151-353 (381)
4 1iy9_A Spermidine synthase; ro 100.0 3.6E-28 1.2E-32 212.4 20.9 209 10-241 19-236 (275)
5 3adn_A Spermidine synthase; am 100.0 7.6E-29 2.6E-33 218.6 16.2 215 7-242 24-246 (294)
6 2qfm_A Spermine synthase; sper 100.0 5.5E-27 1.9E-31 210.0 21.7 192 9-225 133-339 (364)
7 1uir_A Polyamine aminopropyltr 99.9 3E-27 1E-31 210.3 17.3 211 8-241 19-242 (314)
8 1mjf_A Spermidine synthase; sp 99.9 1.5E-26 5E-31 202.7 20.8 211 8-241 17-239 (281)
9 2i7c_A Spermidine synthase; tr 99.9 1.5E-26 5.1E-31 202.9 19.2 211 8-241 20-239 (283)
10 2b2c_A Spermidine synthase; be 99.9 4.4E-26 1.5E-30 202.6 20.1 210 11-242 53-270 (314)
11 1inl_A Spermidine synthase; be 99.9 8.3E-26 2.8E-30 199.4 21.1 211 8-241 32-252 (296)
12 2o07_A Spermidine synthase; st 99.9 1E-25 3.4E-30 199.5 19.2 210 11-242 40-257 (304)
13 3bwc_A Spermidine synthase; SA 99.9 8.3E-25 2.8E-29 193.7 22.4 213 9-242 35-259 (304)
14 2pt6_A Spermidine synthase; tr 99.9 8.1E-25 2.8E-29 195.1 20.8 212 8-242 58-278 (321)
15 2cmg_A Spermidine synthase; tr 99.9 6.8E-25 2.3E-29 190.3 18.5 198 8-242 15-217 (262)
16 1xj5_A Spermidine synthase 1; 99.9 4.5E-24 1.5E-28 191.1 19.5 211 9-241 63-283 (334)
17 3fpf_A Mtnas, putative unchara 99.7 7.8E-18 2.7E-22 147.3 10.2 150 74-245 119-268 (298)
18 3orh_A Guanidinoacetate N-meth 99.6 2.4E-16 8.3E-21 134.2 7.0 120 62-189 46-169 (236)
19 3e05_A Precorrin-6Y C5,15-meth 99.6 1.9E-14 6.6E-19 119.1 15.9 107 74-192 37-144 (204)
20 4df3_A Fibrillarin-like rRNA/T 99.6 2.7E-13 9.3E-18 114.9 23.1 148 74-238 74-229 (233)
21 3dr5_A Putative O-methyltransf 99.6 2.3E-15 7.8E-20 127.0 10.2 100 79-189 58-162 (221)
22 4gek_A TRNA (CMO5U34)-methyltr 99.6 5E-15 1.7E-19 128.0 12.3 109 75-190 68-178 (261)
23 3ntv_A MW1564 protein; rossman 99.6 3.5E-15 1.2E-19 126.5 10.9 103 77-190 71-176 (232)
24 2ozv_A Hypothetical protein AT 99.6 1.4E-14 4.9E-19 124.9 14.6 133 71-220 30-187 (260)
25 1yzh_A TRNA (guanine-N(7)-)-me 99.6 3.3E-14 1.1E-18 118.7 15.7 110 77-191 41-157 (214)
26 2fca_A TRNA (guanine-N(7)-)-me 99.6 2.7E-14 9.3E-19 119.5 15.0 110 77-191 38-154 (213)
27 3tfw_A Putative O-methyltransf 99.6 7.1E-15 2.4E-19 125.9 10.6 105 76-191 62-171 (248)
28 3dxy_A TRNA (guanine-N(7)-)-me 99.6 2E-14 6.9E-19 120.9 13.1 110 77-191 34-151 (218)
29 3duw_A OMT, O-methyltransferas 99.6 5.4E-15 1.9E-19 124.0 9.5 105 76-191 57-168 (223)
30 1dus_A MJ0882; hypothetical pr 99.6 5.1E-14 1.7E-18 114.5 14.8 152 65-238 40-191 (194)
31 3mti_A RRNA methylase; SAM-dep 99.6 2.2E-14 7.5E-19 116.7 12.4 113 74-193 19-138 (185)
32 1sui_A Caffeoyl-COA O-methyltr 99.6 8.2E-15 2.8E-19 125.6 10.2 103 77-190 79-190 (247)
33 3tr6_A O-methyltransferase; ce 99.6 3.3E-14 1.1E-18 119.2 13.4 104 77-191 64-175 (225)
34 3evz_A Methyltransferase; NYSG 99.6 1.3E-13 4.4E-18 116.0 17.0 151 74-243 52-221 (230)
35 3dtn_A Putative methyltransfer 99.6 4.8E-14 1.7E-18 118.8 14.3 107 75-193 42-151 (234)
36 3f4k_A Putative methyltransfer 99.6 4E-14 1.4E-18 120.9 13.8 110 72-191 41-151 (257)
37 3r3h_A O-methyltransferase, SA 99.6 1.2E-14 4.2E-19 124.1 10.4 104 76-190 59-170 (242)
38 3kkz_A Uncharacterized protein 99.6 2.9E-14 1E-18 122.8 12.4 110 72-191 41-151 (267)
39 3hm2_A Precorrin-6Y C5,15-meth 99.5 6E-14 2E-18 113.0 13.2 106 75-193 23-130 (178)
40 3c3y_A Pfomt, O-methyltransfer 99.5 9.7E-15 3.3E-19 124.3 8.9 104 76-190 69-181 (237)
41 3c3p_A Methyltransferase; NP_9 99.5 1.2E-14 3.9E-19 121.0 9.1 101 77-189 56-159 (210)
42 1xdz_A Methyltransferase GIDB; 99.5 3.4E-14 1.2E-18 120.8 12.0 103 76-191 69-175 (240)
43 3njr_A Precorrin-6Y methylase; 99.5 1.2E-13 3.9E-18 114.9 14.9 104 74-192 52-156 (204)
44 4hg2_A Methyltransferase type 99.5 2.3E-14 7.8E-19 123.6 11.0 100 77-194 39-139 (257)
45 3jwg_A HEN1, methyltransferase 99.5 9.1E-14 3.1E-18 116.1 14.2 111 76-191 28-142 (219)
46 4dzr_A Protein-(glutamine-N5) 99.5 6E-15 2.1E-19 122.1 6.9 150 76-242 29-206 (215)
47 3mb5_A SAM-dependent methyltra 99.5 7.5E-14 2.6E-18 119.4 13.7 127 74-226 90-220 (255)
48 3eey_A Putative rRNA methylase 99.5 1.1E-13 3.8E-18 113.6 12.8 115 75-193 20-142 (197)
49 3jwh_A HEN1; methyltransferase 99.5 5.9E-14 2E-18 117.2 11.1 111 76-191 28-142 (217)
50 4dcm_A Ribosomal RNA large sub 99.5 2E-13 6.7E-18 123.9 15.3 134 76-227 221-355 (375)
51 3mgg_A Methyltransferase; NYSG 99.5 1E-13 3.5E-18 119.8 12.6 116 67-191 27-143 (276)
52 3g89_A Ribosomal RNA small sub 99.5 8.7E-14 3E-18 119.4 12.0 103 76-191 79-185 (249)
53 1fbn_A MJ fibrillarin homologu 99.5 1E-12 3.5E-17 110.9 18.4 102 75-189 72-177 (230)
54 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1.6E-13 5.5E-18 116.7 13.5 115 77-191 46-169 (235)
55 2avd_A Catechol-O-methyltransf 99.5 2E-13 7E-18 114.7 14.0 104 76-190 68-179 (229)
56 3hem_A Cyclopropane-fatty-acyl 99.5 1.8E-13 6E-18 120.1 14.2 117 69-193 64-186 (302)
57 3dh0_A SAM dependent methyltra 99.5 1.8E-13 6.3E-18 114.0 13.6 110 75-193 35-146 (219)
58 2gpy_A O-methyltransferase; st 99.5 5.2E-14 1.8E-18 118.9 10.2 104 76-190 53-160 (233)
59 1nkv_A Hypothetical protein YJ 99.5 1.1E-13 3.9E-18 118.0 12.2 117 64-190 23-140 (256)
60 1zx0_A Guanidinoacetate N-meth 99.5 4.6E-14 1.6E-18 119.6 9.5 106 76-189 59-169 (236)
61 1pjz_A Thiopurine S-methyltran 99.5 3E-14 1E-18 118.3 8.1 110 75-188 20-138 (203)
62 3lpm_A Putative methyltransfer 99.5 1E-13 3.5E-18 119.3 11.7 115 71-190 42-176 (259)
63 3gu3_A Methyltransferase; alph 99.5 1.3E-13 4.5E-18 120.0 12.4 118 65-192 9-128 (284)
64 3p9n_A Possible methyltransfer 99.5 7.9E-14 2.7E-18 114.1 10.4 109 76-193 43-156 (189)
65 1jsx_A Glucose-inhibited divis 99.5 7E-14 2.4E-18 115.6 10.1 103 77-192 65-167 (207)
66 3u81_A Catechol O-methyltransf 99.5 2.1E-14 7.2E-19 120.5 6.9 106 77-191 58-171 (221)
67 3a27_A TYW2, uncharacterized p 99.5 1.8E-13 6.1E-18 118.9 12.5 126 75-220 117-242 (272)
68 3cbg_A O-methyltransferase; cy 99.5 2.4E-13 8.2E-18 115.2 12.9 104 77-191 72-183 (232)
69 1g8a_A Fibrillarin-like PRE-rR 99.5 1.3E-11 4.4E-16 103.6 23.2 103 75-190 71-178 (227)
70 3g5l_A Putative S-adenosylmeth 99.5 3E-13 1E-17 115.3 13.3 105 75-192 42-147 (253)
71 2b3t_A Protein methyltransfera 99.5 7.6E-13 2.6E-17 114.8 16.0 111 76-191 108-239 (276)
72 3g5t_A Trans-aconitate 3-methy 99.5 1.4E-13 4.8E-18 120.6 11.5 107 76-190 35-149 (299)
73 2p35_A Trans-aconitate 2-methy 99.5 2.7E-13 9.1E-18 115.8 12.8 111 68-193 24-135 (259)
74 2gb4_A Thiopurine S-methyltran 99.5 1.4E-13 4.8E-18 118.3 11.1 109 76-188 67-189 (252)
75 2frn_A Hypothetical protein PH 99.5 5.6E-14 1.9E-18 122.4 8.7 106 75-193 123-228 (278)
76 3ujc_A Phosphoethanolamine N-m 99.5 2.2E-13 7.4E-18 116.6 12.2 109 74-192 52-161 (266)
77 3sm3_A SAM-dependent methyltra 99.5 1.2E-12 4.1E-17 109.8 16.4 111 76-193 29-144 (235)
78 3ofk_A Nodulation protein S; N 99.5 1.6E-13 5.3E-18 114.3 10.9 103 75-191 49-155 (216)
79 3id6_C Fibrillarin-like rRNA/T 99.5 1.3E-11 4.5E-16 104.6 22.7 147 75-239 74-229 (232)
80 3dlc_A Putative S-adenosyl-L-m 99.5 4.5E-13 1.5E-17 111.1 13.3 104 78-190 44-148 (219)
81 3g07_A 7SK snRNA methylphospha 99.5 9.6E-14 3.3E-18 121.6 9.5 114 76-190 45-220 (292)
82 2hnk_A SAM-dependent O-methylt 99.5 5.4E-13 1.9E-17 113.2 13.8 104 76-190 59-181 (239)
83 1yb2_A Hypothetical protein TA 99.5 1.8E-13 6.3E-18 118.7 11.1 104 75-192 108-213 (275)
84 3lbf_A Protein-L-isoaspartate 99.5 3.7E-13 1.3E-17 111.6 12.4 102 74-192 74-176 (210)
85 3ou2_A SAM-dependent methyltra 99.5 3.9E-13 1.3E-17 111.6 12.6 103 75-193 44-149 (218)
86 2pwy_A TRNA (adenine-N(1)-)-me 99.5 4.4E-13 1.5E-17 114.4 13.2 105 74-192 93-200 (258)
87 3vc1_A Geranyl diphosphate 2-C 99.5 2.8E-13 9.5E-18 119.6 12.3 107 75-191 115-222 (312)
88 3h2b_A SAM-dependent methyltra 99.5 2.4E-13 8.3E-18 112.0 11.1 102 78-193 42-144 (203)
89 1vl5_A Unknown conserved prote 99.5 3.7E-13 1.3E-17 115.4 12.4 105 75-190 35-140 (260)
90 3bus_A REBM, methyltransferase 99.5 4.5E-13 1.5E-17 115.5 13.0 109 74-191 58-167 (273)
91 1nt2_A Fibrillarin-like PRE-rR 99.5 2.5E-13 8.6E-18 113.5 10.8 103 75-190 55-161 (210)
92 2vdv_E TRNA (guanine-N(7)-)-me 99.5 7.9E-13 2.7E-17 112.8 14.0 115 76-190 48-173 (246)
93 3ocj_A Putative exported prote 99.5 6.3E-14 2.2E-18 123.3 7.0 114 75-193 116-230 (305)
94 1kpg_A CFA synthase;, cyclopro 99.5 7.9E-13 2.7E-17 114.9 13.9 115 69-192 56-170 (287)
95 3lcc_A Putative methyl chlorid 99.5 1.9E-13 6.3E-18 115.5 9.6 109 77-193 66-174 (235)
96 2esr_A Methyltransferase; stru 99.5 8.1E-14 2.8E-18 112.5 7.0 109 75-193 29-141 (177)
97 2p7i_A Hypothetical protein; p 99.5 3.6E-13 1.2E-17 113.8 11.2 102 76-193 41-144 (250)
98 3l8d_A Methyltransferase; stru 99.5 6.6E-13 2.3E-17 112.2 12.8 104 76-193 52-156 (242)
99 1ve3_A Hypothetical protein PH 99.4 2.3E-13 7.8E-18 113.8 9.3 108 75-192 36-144 (227)
100 2ex4_A Adrenal gland protein A 99.4 3.5E-13 1.2E-17 114.3 10.6 103 77-190 79-185 (241)
101 1o54_A SAM-dependent O-methylt 99.4 6.7E-13 2.3E-17 115.2 12.6 106 74-192 109-215 (277)
102 2bm8_A Cephalosporin hydroxyla 99.4 2E-13 6.8E-18 116.2 8.7 97 77-190 81-187 (236)
103 3dmg_A Probable ribosomal RNA 99.4 7.9E-13 2.7E-17 120.1 13.2 140 77-242 233-374 (381)
104 3hnr_A Probable methyltransfer 99.4 1.2E-12 4.2E-17 109.0 13.3 100 76-191 44-146 (220)
105 3r0q_C Probable protein argini 99.4 6.3E-13 2.2E-17 120.6 12.2 118 65-189 51-168 (376)
106 3q7e_A Protein arginine N-meth 99.4 2.8E-13 9.7E-18 121.7 9.8 118 65-189 54-172 (349)
107 1wzn_A SAM-dependent methyltra 99.4 3.7E-13 1.3E-17 114.6 10.0 108 76-192 40-147 (252)
108 4hc4_A Protein arginine N-meth 99.4 8.8E-14 3E-18 125.9 6.3 121 62-189 68-188 (376)
109 3grz_A L11 mtase, ribosomal pr 99.4 5E-13 1.7E-17 110.5 10.3 104 75-192 58-161 (205)
110 2fk8_A Methoxy mycolic acid sy 99.4 1.3E-12 4.3E-17 115.4 13.5 111 74-193 87-197 (318)
111 2xvm_A Tellurite resistance pr 99.4 5.9E-13 2E-17 108.9 10.5 106 76-190 31-136 (199)
112 3d2l_A SAM-dependent methyltra 99.4 2.2E-13 7.4E-18 115.1 8.0 109 75-192 31-139 (243)
113 3ggd_A SAM-dependent methyltra 99.4 9.5E-13 3.2E-17 111.7 11.9 109 73-193 52-166 (245)
114 1xxl_A YCGJ protein; structura 99.4 1.6E-12 5.4E-17 110.2 13.2 107 74-191 18-125 (239)
115 1l3i_A Precorrin-6Y methyltran 99.4 1.7E-12 5.8E-17 105.2 12.8 121 74-219 30-152 (192)
116 2fhp_A Methylase, putative; al 99.4 3E-13 1E-17 109.7 8.3 109 75-193 42-157 (187)
117 2p8j_A S-adenosylmethionine-de 99.4 2.3E-13 7.8E-18 112.5 7.6 107 75-193 21-131 (209)
118 2o57_A Putative sarcosine dime 99.4 7.2E-13 2.5E-17 115.7 11.1 109 74-191 79-188 (297)
119 3g2m_A PCZA361.24; SAM-depende 99.4 2E-13 6.9E-18 119.6 7.6 112 77-193 82-193 (299)
120 2fyt_A Protein arginine N-meth 99.4 6.8E-13 2.3E-17 118.8 11.1 116 65-187 52-168 (340)
121 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.4E-12 4.9E-17 110.9 12.6 104 75-191 91-198 (254)
122 1i9g_A Hypothetical protein RV 99.4 1.5E-12 5.2E-17 112.7 12.9 120 74-217 96-218 (280)
123 2yqz_A Hypothetical protein TT 99.4 1.1E-12 3.8E-17 112.1 11.7 104 74-189 36-140 (263)
124 4htf_A S-adenosylmethionine-de 99.4 7.3E-13 2.5E-17 115.1 10.7 106 77-192 68-175 (285)
125 3bkw_A MLL3908 protein, S-aden 99.4 1.4E-12 4.9E-17 110.0 12.2 105 75-192 41-146 (243)
126 2ift_A Putative methylase HI07 99.4 3.3E-13 1.1E-17 111.8 8.1 108 77-193 53-166 (201)
127 2yxd_A Probable cobalt-precorr 99.4 3.3E-12 1.1E-16 102.8 13.7 116 74-218 32-147 (183)
128 2yxe_A Protein-L-isoaspartate 99.4 1.6E-12 5.3E-17 108.2 11.9 104 74-192 74-179 (215)
129 2yvl_A TRMI protein, hypotheti 99.4 2.7E-12 9.3E-17 108.8 13.3 103 75-192 89-192 (248)
130 3tma_A Methyltransferase; thum 99.4 1.2E-12 4.1E-17 117.6 11.6 123 65-192 191-319 (354)
131 1ws6_A Methyltransferase; stru 99.4 5.7E-13 2E-17 106.4 8.4 103 77-193 41-150 (171)
132 2fpo_A Methylase YHHF; structu 99.4 8.1E-13 2.8E-17 109.5 9.6 105 77-192 54-162 (202)
133 3ajd_A Putative methyltransfer 99.4 1.7E-12 6E-17 112.6 12.1 115 75-194 81-215 (274)
134 2ipx_A RRNA 2'-O-methyltransfe 99.4 9.2E-13 3.1E-17 111.3 10.0 104 75-191 75-183 (233)
135 1nv8_A HEMK protein; class I a 99.4 5.6E-12 1.9E-16 110.1 15.3 109 77-191 123-250 (284)
136 2pxx_A Uncharacterized protein 99.4 1.8E-12 6.3E-17 107.1 11.6 111 75-193 40-162 (215)
137 2nxc_A L11 mtase, ribosomal pr 99.4 9.4E-13 3.2E-17 113.1 9.9 103 75-192 118-220 (254)
138 3pfg_A N-methyltransferase; N, 99.4 5.1E-13 1.7E-17 114.6 8.3 98 77-190 50-151 (263)
139 3ccf_A Cyclopropane-fatty-acyl 99.4 1.6E-12 5.5E-17 112.7 11.4 103 75-193 55-157 (279)
140 2b25_A Hypothetical protein; s 99.4 2E-12 6.7E-17 115.3 12.2 123 74-218 102-235 (336)
141 3bxo_A N,N-dimethyltransferase 99.4 7.3E-13 2.5E-17 111.6 8.8 105 76-192 39-143 (239)
142 1ixk_A Methyltransferase; open 99.4 3.7E-12 1.3E-16 112.9 13.7 115 75-194 116-250 (315)
143 1dl5_A Protein-L-isoaspartate 99.4 1.6E-12 5.6E-17 115.1 11.4 104 74-192 72-177 (317)
144 3k6r_A Putative transferase PH 99.4 6.1E-13 2.1E-17 115.7 8.5 105 75-192 123-227 (278)
145 3m70_A Tellurite resistance pr 99.4 1.3E-12 4.4E-17 113.6 10.6 105 77-191 120-224 (286)
146 3e23_A Uncharacterized protein 99.4 8.9E-13 3.1E-17 109.3 9.0 101 75-193 41-144 (211)
147 2kw5_A SLR1183 protein; struct 99.4 1E-12 3.4E-17 108.2 9.3 104 77-193 30-134 (202)
148 1ri5_A MRNA capping enzyme; me 99.4 9.2E-13 3.1E-17 114.6 9.4 113 75-192 62-176 (298)
149 3dli_A Methyltransferase; PSI- 99.4 1.3E-12 4.3E-17 110.8 9.7 102 72-193 36-143 (240)
150 2y1w_A Histone-arginine methyl 99.4 1.5E-12 5.2E-17 116.9 10.8 119 64-190 37-155 (348)
151 3kr9_A SAM-dependent methyltra 99.4 1.8E-12 6E-17 109.4 10.3 107 75-191 13-120 (225)
152 3i9f_A Putative type 11 methyl 99.4 4.2E-12 1.4E-16 101.6 12.0 101 75-193 15-115 (170)
153 1i1n_A Protein-L-isoaspartate 99.4 1.4E-12 4.7E-17 109.4 9.5 108 75-192 75-184 (226)
154 2pjd_A Ribosomal RNA small sub 99.4 2.2E-12 7.5E-17 115.5 11.0 110 76-192 195-305 (343)
155 3thr_A Glycine N-methyltransfe 99.4 5.2E-13 1.8E-17 116.3 6.7 112 76-192 56-177 (293)
156 3e8s_A Putative SAM dependent 99.4 2.9E-12 9.8E-17 106.7 10.9 99 77-193 52-155 (227)
157 4fsd_A Arsenic methyltransfera 99.4 3E-12 1E-16 116.3 11.9 113 75-191 81-204 (383)
158 3cgg_A SAM-dependent methyltra 99.4 3.8E-12 1.3E-16 103.4 11.3 103 75-193 44-150 (195)
159 1y8c_A S-adenosylmethionine-de 99.4 7.3E-13 2.5E-17 111.8 7.2 107 77-192 37-144 (246)
160 1g6q_1 HnRNP arginine N-methyl 99.4 1.4E-12 4.8E-17 116.2 9.1 118 64-188 25-143 (328)
161 1jg1_A PIMT;, protein-L-isoasp 99.4 2.4E-12 8.2E-17 108.9 9.8 104 74-193 88-192 (235)
162 3mq2_A 16S rRNA methyltransfer 99.4 2.2E-12 7.4E-17 107.6 9.4 113 75-190 25-140 (218)
163 2pbf_A Protein-L-isoaspartate 99.4 2.2E-12 7.4E-17 108.3 9.4 108 74-191 77-194 (227)
164 2qy6_A UPF0209 protein YFCK; s 99.4 2.4E-12 8.1E-17 110.9 9.8 147 77-242 60-248 (257)
165 3p2e_A 16S rRNA methylase; met 99.4 5.6E-13 1.9E-17 112.6 5.7 108 76-188 23-137 (225)
166 3m33_A Uncharacterized protein 99.4 1.6E-12 5.6E-17 109.3 8.5 90 76-187 47-139 (226)
167 3lec_A NADB-rossmann superfami 99.4 3.3E-12 1.1E-16 108.0 10.3 108 75-192 19-127 (230)
168 1vbf_A 231AA long hypothetical 99.4 1E-11 3.4E-16 104.4 13.3 101 74-193 67-168 (231)
169 2qe6_A Uncharacterized protein 99.4 4.3E-12 1.5E-16 110.2 11.3 108 77-193 77-199 (274)
170 3dou_A Ribosomal RNA large sub 99.3 3.7E-12 1.3E-16 104.8 10.2 125 72-227 20-163 (191)
171 3dp7_A SAM-dependent methyltra 99.3 4.8E-12 1.6E-16 114.1 11.9 107 77-190 179-287 (363)
172 3iv6_A Putative Zn-dependent a 99.3 1.3E-11 4.5E-16 106.4 13.7 111 66-192 34-150 (261)
173 2plw_A Ribosomal RNA methyltra 99.3 4.8E-12 1.6E-16 104.0 10.4 124 74-226 19-177 (201)
174 3gnl_A Uncharacterized protein 99.3 4.2E-12 1.4E-16 108.2 10.2 107 75-191 19-126 (244)
175 2gs9_A Hypothetical protein TT 99.3 5.2E-12 1.8E-16 104.6 10.5 98 77-193 36-135 (211)
176 2igt_A SAM dependent methyltra 99.3 4.1E-12 1.4E-16 113.4 10.4 110 77-191 153-273 (332)
177 1p91_A Ribosomal RNA large sub 99.3 5.6E-12 1.9E-16 108.5 10.6 97 76-193 84-181 (269)
178 1r18_A Protein-L-isoaspartate( 99.3 5.9E-12 2E-16 105.9 10.3 109 74-192 81-196 (227)
179 3bgv_A MRNA CAP guanine-N7 met 99.3 2.6E-12 8.8E-17 113.3 8.1 115 76-192 33-157 (313)
180 3ege_A Putative methyltransfer 99.3 3.5E-12 1.2E-16 109.5 8.7 100 75-192 32-132 (261)
181 3uwp_A Histone-lysine N-methyl 99.3 5.2E-12 1.8E-16 114.7 10.1 118 66-189 162-287 (438)
182 3fzg_A 16S rRNA methylase; met 99.3 1.8E-12 6.2E-17 106.0 6.4 103 75-188 47-150 (200)
183 2b78_A Hypothetical protein SM 99.3 4.9E-12 1.7E-16 115.1 9.9 114 76-194 211-335 (385)
184 3q87_B N6 adenine specific DNA 99.3 2.5E-11 8.4E-16 97.8 12.9 99 76-192 22-125 (170)
185 1o9g_A RRNA methyltransferase; 99.3 8.5E-13 2.9E-17 112.7 4.5 108 77-188 51-212 (250)
186 2vdw_A Vaccinia virus capping 99.3 6.2E-12 2.1E-16 110.8 9.8 114 77-192 48-171 (302)
187 1qzz_A RDMB, aclacinomycin-10- 99.3 2E-11 6.8E-16 110.1 12.9 105 76-191 181-288 (374)
188 1ej0_A FTSJ; methyltransferase 99.3 9.7E-12 3.3E-16 99.1 9.5 124 74-226 19-159 (180)
189 3i53_A O-methyltransferase; CO 99.3 1.6E-11 5.5E-16 109.1 11.9 104 77-191 169-275 (332)
190 2avn_A Ubiquinone/menaquinone 99.3 6.9E-12 2.4E-16 107.6 9.2 101 77-193 54-155 (260)
191 3m6w_A RRNA methylase; rRNA me 99.3 1.7E-11 5.7E-16 113.8 12.3 114 75-194 99-233 (464)
192 2yx1_A Hypothetical protein MJ 99.3 9.6E-12 3.3E-16 111.1 10.1 101 76-193 194-294 (336)
193 4dmg_A Putative uncharacterize 99.3 2.9E-11 9.9E-16 110.2 13.4 112 75-194 212-330 (393)
194 3mcz_A O-methyltransferase; ad 99.3 1.2E-11 4.3E-16 110.6 10.8 106 76-191 177-288 (352)
195 1wxx_A TT1595, hypothetical pr 99.3 1.6E-11 5.6E-16 111.4 11.6 111 77-194 209-329 (382)
196 3gwz_A MMCR; methyltransferase 99.3 2.8E-11 9.6E-16 109.3 12.9 106 75-191 200-308 (369)
197 2qm3_A Predicted methyltransfe 99.3 1.1E-11 3.7E-16 112.3 10.1 105 77-192 172-280 (373)
198 3gdh_A Trimethylguanosine synt 99.3 5E-13 1.7E-17 113.2 0.9 104 77-190 78-181 (241)
199 2dul_A N(2),N(2)-dimethylguano 99.3 1.2E-11 4.1E-16 112.2 9.8 101 77-190 47-164 (378)
200 2nyu_A Putative ribosomal RNA 99.3 2.1E-11 7.2E-16 99.6 10.3 125 72-226 17-168 (196)
201 3c0k_A UPF0064 protein YCCW; P 99.3 4.7E-11 1.6E-15 108.9 13.5 115 76-194 219-343 (396)
202 3bkx_A SAM-dependent methyltra 99.3 1.6E-11 5.4E-16 105.8 9.8 110 75-193 41-162 (275)
203 2aot_A HMT, histamine N-methyl 99.3 1.2E-11 4.1E-16 108.0 8.9 107 77-192 52-174 (292)
204 3b3j_A Histone-arginine methyl 99.3 8.3E-12 2.8E-16 116.7 8.1 108 75-190 156-263 (480)
205 1u2z_A Histone-lysine N-methyl 99.3 1.6E-11 5.5E-16 112.9 9.9 108 74-189 239-358 (433)
206 2r3s_A Uncharacterized protein 99.3 2.3E-11 8E-16 107.8 10.6 110 76-192 164-273 (335)
207 1x19_A CRTF-related protein; m 99.2 5.2E-11 1.8E-15 107.0 12.5 105 75-190 188-295 (359)
208 2h00_A Methyltransferase 10 do 99.2 6E-12 2.1E-16 107.5 6.1 77 77-157 65-148 (254)
209 1tw3_A COMT, carminomycin 4-O- 99.2 4.3E-11 1.5E-15 107.4 11.7 106 76-192 182-290 (360)
210 3m4x_A NOL1/NOP2/SUN family pr 99.2 3.7E-11 1.3E-15 111.3 11.5 115 75-194 103-238 (456)
211 2as0_A Hypothetical protein PH 99.2 2.4E-11 8.3E-16 110.8 10.0 114 76-194 216-339 (396)
212 2i62_A Nicotinamide N-methyltr 99.2 3.4E-12 1.2E-16 109.1 4.0 114 76-191 55-199 (265)
213 3cc8_A Putative methyltransfer 99.2 6.9E-11 2.4E-15 98.5 11.6 98 76-192 31-132 (230)
214 2frx_A Hypothetical protein YE 99.2 5.2E-11 1.8E-15 111.2 11.9 113 77-194 117-250 (479)
215 2ip2_A Probable phenazine-spec 99.2 1.8E-11 6E-16 108.8 8.3 105 79-191 169-273 (334)
216 1sqg_A SUN protein, FMU protei 99.2 9.3E-11 3.2E-15 108.1 13.2 114 75-194 244-378 (429)
217 2wa2_A Non-structural protein 99.2 9.1E-12 3.1E-16 108.3 5.4 132 74-226 79-218 (276)
218 3sso_A Methyltransferase; macr 99.2 1.6E-11 5.6E-16 111.1 6.9 97 76-191 215-325 (419)
219 2yxl_A PH0851 protein, 450AA l 99.2 1.4E-10 4.8E-15 107.5 13.4 115 75-194 257-393 (450)
220 2oxt_A Nucleoside-2'-O-methylt 99.2 1.8E-11 6.1E-16 105.9 6.8 133 74-227 71-211 (265)
221 1wy7_A Hypothetical protein PH 99.2 9.3E-10 3.2E-14 90.7 16.6 101 76-189 48-148 (207)
222 3v97_A Ribosomal RNA large sub 99.2 4.4E-11 1.5E-15 116.6 9.8 114 76-193 538-660 (703)
223 3htx_A HEN1; HEN1, small RNA m 99.2 1.1E-10 3.9E-15 113.6 12.3 109 77-191 721-835 (950)
224 4a6d_A Hydroxyindole O-methylt 99.2 1.5E-10 5.2E-15 104.0 12.2 107 76-191 178-284 (353)
225 2a14_A Indolethylamine N-methy 99.2 6.6E-12 2.3E-16 108.2 2.7 113 76-191 54-198 (263)
226 2p41_A Type II methyltransfera 99.2 3.9E-11 1.3E-15 105.8 7.4 130 73-226 78-216 (305)
227 3axs_A Probable N(2),N(2)-dime 99.2 5.2E-11 1.8E-15 108.3 8.2 103 77-191 52-159 (392)
228 1af7_A Chemotaxis receptor met 99.2 1.2E-10 4.3E-15 101.0 10.1 108 77-189 105-251 (274)
229 3cvo_A Methyltransferase-like 99.2 2.9E-10 9.8E-15 94.1 11.8 100 75-188 28-152 (202)
230 3tm4_A TRNA (guanine N2-)-meth 99.2 1E-10 3.6E-15 105.9 10.0 120 65-191 206-330 (373)
231 3giw_A Protein of unknown func 99.2 2.8E-10 9.5E-15 98.4 12.1 110 78-193 79-203 (277)
232 3lst_A CALO1 methyltransferase 99.2 1.5E-10 5.3E-15 103.5 10.9 103 75-191 182-287 (348)
233 1ne2_A Hypothetical protein TA 99.2 2.3E-10 7.9E-15 94.0 11.1 96 76-188 50-145 (200)
234 3hp7_A Hemolysin, putative; st 99.2 1.3E-10 4.3E-15 101.6 9.9 95 77-189 85-184 (291)
235 1vlm_A SAM-dependent methyltra 99.1 9.2E-11 3.1E-15 97.9 7.9 94 77-193 47-142 (219)
236 2g72_A Phenylethanolamine N-me 99.1 2.1E-11 7.1E-16 106.2 4.0 111 77-189 71-214 (289)
237 4e2x_A TCAB9; kijanose, tetron 99.1 5E-11 1.7E-15 109.1 5.8 103 75-191 105-209 (416)
238 2xyq_A Putative 2'-O-methyl tr 99.1 5E-10 1.7E-14 97.9 11.5 134 74-240 60-210 (290)
239 2jjq_A Uncharacterized RNA met 99.1 5.2E-10 1.8E-14 102.9 12.1 100 75-190 288-387 (425)
240 1fp1_D Isoliquiritigenin 2'-O- 99.1 1.7E-10 6E-15 104.1 8.7 97 75-190 207-306 (372)
241 3bzb_A Uncharacterized protein 99.1 7.1E-10 2.4E-14 96.4 11.9 111 75-191 77-206 (281)
242 3p9c_A Caffeic acid O-methyltr 99.1 2.3E-10 7.9E-15 103.2 9.0 101 75-191 199-299 (364)
243 1fp2_A Isoflavone O-methyltran 99.1 2.2E-10 7.7E-15 102.6 8.8 98 75-191 186-289 (352)
244 3reo_A (ISO)eugenol O-methyltr 99.1 2.5E-10 8.6E-15 103.1 9.1 101 75-191 201-301 (368)
245 1zq9_A Probable dimethyladenos 99.1 6.8E-10 2.3E-14 96.8 11.0 87 65-158 16-102 (285)
246 3frh_A 16S rRNA methylase; met 99.1 8.7E-10 3E-14 93.3 11.1 103 76-191 104-206 (253)
247 3lcv_B Sisomicin-gentamicin re 99.1 1.6E-10 5.4E-15 98.7 6.6 102 75-188 130-234 (281)
248 3opn_A Putative hemolysin; str 99.1 4.8E-10 1.6E-14 95.0 9.4 106 67-190 27-137 (232)
249 2ih2_A Modification methylase 99.1 3.4E-10 1.2E-14 103.5 9.1 114 65-192 27-166 (421)
250 3ldg_A Putative uncharacterize 99.1 1E-09 3.4E-14 99.7 11.6 124 64-191 181-344 (384)
251 3gru_A Dimethyladenosine trans 99.0 1.2E-09 4E-14 95.8 11.2 84 65-157 38-122 (295)
252 1uwv_A 23S rRNA (uracil-5-)-me 99.0 1E-09 3.6E-14 101.2 11.3 101 75-190 284-389 (433)
253 3ldu_A Putative methylase; str 99.0 5.3E-10 1.8E-14 101.7 9.1 124 64-191 182-345 (385)
254 2f8l_A Hypothetical protein LM 99.0 3.1E-10 1E-14 101.5 7.3 111 77-193 130-259 (344)
255 3k0b_A Predicted N6-adenine-sp 99.0 6.5E-10 2.2E-14 101.3 8.7 123 65-191 189-351 (393)
256 2okc_A Type I restriction enzy 99.0 9.6E-10 3.3E-14 101.7 8.6 112 77-191 171-308 (445)
257 3bt7_A TRNA (uracil-5-)-methyl 99.0 8.5E-10 2.9E-14 99.7 7.9 99 78-193 214-329 (369)
258 3fut_A Dimethyladenosine trans 99.0 3.4E-09 1.2E-13 91.7 11.3 83 65-158 35-119 (271)
259 2zfu_A Nucleomethylin, cerebra 99.0 5.7E-09 1.9E-13 86.4 11.5 87 76-192 66-153 (215)
260 2b9e_A NOL1/NOP2/SUN domain fa 98.9 1.2E-08 4.1E-13 90.0 14.1 114 75-194 100-238 (309)
261 3vyw_A MNMC2; tRNA wobble urid 98.9 5.8E-09 2E-13 91.3 10.9 144 78-241 97-260 (308)
262 1m6y_A S-adenosyl-methyltransf 98.9 2.1E-09 7.2E-14 94.4 8.2 78 75-158 24-107 (301)
263 2h1r_A Dimethyladenosine trans 98.9 1.8E-09 6.1E-14 94.9 7.7 85 66-158 31-115 (299)
264 1qam_A ERMC' methyltransferase 98.9 1.6E-08 5.4E-13 86.1 13.3 83 65-157 18-102 (244)
265 1zg3_A Isoflavanone 4'-O-methy 98.9 1.4E-09 4.9E-14 97.5 6.9 98 77-190 193-293 (358)
266 4azs_A Methyltransferase WBDD; 98.9 2.6E-09 9.1E-14 101.8 8.1 101 76-188 65-171 (569)
267 3tqs_A Ribosomal RNA small sub 98.9 6E-09 2E-13 89.5 8.8 83 65-157 17-104 (255)
268 2ld4_A Anamorsin; methyltransf 98.8 4.1E-09 1.4E-13 84.7 5.6 87 75-189 10-100 (176)
269 1yub_A Ermam, rRNA methyltrans 98.8 5.1E-11 1.8E-15 101.6 -6.4 115 66-190 18-145 (245)
270 4gqb_A Protein arginine N-meth 98.8 7.7E-09 2.6E-13 99.0 7.9 103 78-187 358-464 (637)
271 3evf_A RNA-directed RNA polyme 98.8 1.1E-08 3.7E-13 87.9 7.7 136 74-227 71-210 (277)
272 3ftd_A Dimethyladenosine trans 98.8 4.4E-08 1.5E-12 83.7 11.5 82 65-157 19-103 (249)
273 3ll7_A Putative methyltransfer 98.8 7.2E-09 2.5E-13 94.5 6.1 75 77-158 93-172 (410)
274 3uzu_A Ribosomal RNA small sub 98.7 2.7E-08 9.1E-13 86.5 7.9 71 65-144 30-102 (279)
275 2r6z_A UPF0341 protein in RSP 98.7 7.6E-09 2.6E-13 89.0 4.1 77 76-158 82-170 (258)
276 3gcz_A Polyprotein; flavivirus 98.7 1.1E-08 3.9E-13 87.8 4.9 136 74-227 87-227 (282)
277 2ar0_A M.ecoki, type I restric 98.7 2.6E-08 8.9E-13 94.3 7.8 116 76-191 168-313 (541)
278 3v97_A Ribosomal RNA large sub 98.7 7.9E-08 2.7E-12 93.7 10.8 123 64-190 177-347 (703)
279 3ua3_A Protein arginine N-meth 98.7 3.4E-08 1.2E-12 94.7 7.9 103 78-187 410-531 (745)
280 1qyr_A KSGA, high level kasuga 98.6 3.4E-08 1.2E-12 84.6 6.2 75 74-157 18-98 (252)
281 2wk1_A NOVP; transferase, O-me 98.6 3.4E-08 1.2E-12 85.8 6.0 106 77-191 106-245 (282)
282 2oyr_A UPF0341 protein YHIQ; a 98.6 4.4E-08 1.5E-12 84.1 5.8 100 75-184 84-194 (258)
283 3khk_A Type I restriction-modi 98.6 4.4E-08 1.5E-12 92.7 6.0 111 78-192 245-397 (544)
284 4fzv_A Putative methyltransfer 98.5 6.3E-07 2.1E-11 80.4 11.7 137 75-219 146-307 (359)
285 3lkd_A Type I restriction-modi 98.5 4.6E-07 1.6E-11 85.6 11.1 113 77-192 221-360 (542)
286 3eld_A Methyltransferase; flav 98.5 2.1E-07 7.2E-12 80.5 7.8 137 73-227 77-217 (300)
287 3s1s_A Restriction endonucleas 98.5 4.6E-07 1.6E-11 88.2 9.3 116 76-192 320-467 (878)
288 1wg8_A Predicted S-adenosylmet 98.4 1.1E-06 3.9E-11 75.8 8.7 73 75-158 20-98 (285)
289 3r24_A NSP16, 2'-O-methyl tran 98.4 3.2E-06 1.1E-10 72.9 11.3 117 78-227 110-240 (344)
290 2px2_A Genome polyprotein [con 98.4 5.1E-07 1.7E-11 76.5 6.1 131 74-225 70-207 (269)
291 3p8z_A Mtase, non-structural p 98.3 1.3E-06 4.5E-11 73.0 7.9 128 74-221 75-207 (267)
292 3pvc_A TRNA 5-methylaminomethy 98.2 1.7E-06 5.8E-11 84.1 6.9 112 78-190 59-211 (689)
293 3lkz_A Non-structural protein 98.2 8.6E-06 2.9E-10 70.3 10.1 129 74-221 91-225 (321)
294 3ps9_A TRNA 5-methylaminomethy 98.2 3.6E-06 1.2E-10 81.6 8.4 112 78-190 67-219 (676)
295 2oo3_A Protein involved in cat 98.1 9.7E-06 3.3E-10 70.0 9.5 154 77-254 91-258 (283)
296 4auk_A Ribosomal RNA large sub 98.0 6.4E-05 2.2E-09 67.3 12.9 94 75-190 209-305 (375)
297 3ufb_A Type I restriction-modi 97.9 3.6E-05 1.2E-09 72.6 8.8 111 77-192 217-364 (530)
298 2efj_A 3,7-dimethylxanthine me 97.8 0.00025 8.5E-09 64.0 13.5 110 78-194 53-229 (384)
299 3tka_A Ribosomal RNA small sub 97.8 7.3E-05 2.5E-09 66.0 9.0 74 75-157 55-136 (347)
300 1i4w_A Mitochondrial replicati 97.7 4.8E-05 1.6E-09 68.0 6.6 59 78-144 59-117 (353)
301 2k4m_A TR8_protein, UPF0146 pr 97.7 6.7E-05 2.3E-09 58.3 6.0 59 76-155 34-95 (153)
302 3b5i_A S-adenosyl-L-methionine 97.4 0.00036 1.2E-08 62.8 8.1 116 78-193 53-228 (374)
303 2zig_A TTHA0409, putative modi 97.2 0.00035 1.2E-08 60.7 5.3 45 76-122 234-278 (297)
304 1m6e_X S-adenosyl-L-methionnin 97.2 0.00083 2.8E-08 60.0 7.3 112 78-193 52-212 (359)
305 3tos_A CALS11; methyltransfera 96.9 0.0042 1.4E-07 52.9 9.5 107 77-192 69-219 (257)
306 3m6i_A L-arabinitol 4-dehydrog 96.9 0.0076 2.6E-07 53.5 11.1 96 75-190 177-283 (363)
307 1f8f_A Benzyl alcohol dehydrog 96.8 0.0097 3.3E-07 53.0 11.5 94 74-189 187-288 (371)
308 3jv7_A ADH-A; dehydrogenase, n 96.8 0.0041 1.4E-07 54.9 8.8 96 74-190 168-270 (345)
309 3s2e_A Zinc-containing alcohol 96.8 0.0024 8.1E-08 56.3 6.8 95 74-190 163-263 (340)
310 3fwz_A Inner membrane protein 96.7 0.019 6.4E-07 43.7 10.6 93 78-191 7-106 (140)
311 4eez_A Alcohol dehydrogenase 1 96.7 0.0076 2.6E-07 53.0 9.5 98 75-190 161-263 (348)
312 3fpc_A NADP-dependent alcohol 96.7 0.0086 2.9E-07 52.9 9.8 94 74-189 163-265 (352)
313 3two_A Mannitol dehydrogenase; 96.6 0.0072 2.5E-07 53.3 9.0 92 74-190 173-265 (348)
314 1g55_A DNA cytosine methyltran 96.6 0.017 5.8E-07 51.1 11.2 120 78-217 2-138 (343)
315 1pl8_A Human sorbitol dehydrog 96.6 0.017 6E-07 51.0 11.0 93 75-189 169-272 (356)
316 1e3j_A NADP(H)-dependent ketos 96.4 0.036 1.2E-06 48.8 12.3 93 75-189 166-270 (352)
317 3uog_A Alcohol dehydrogenase; 96.4 0.028 9.6E-07 49.8 11.5 94 74-190 186-287 (363)
318 1uuf_A YAHK, zinc-type alcohol 96.4 0.015 5E-07 51.9 9.3 94 74-189 191-287 (369)
319 2dph_A Formaldehyde dismutase; 96.3 0.0074 2.5E-07 54.4 7.2 101 75-189 183-298 (398)
320 2h6e_A ADH-4, D-arabinose 1-de 96.3 0.01 3.5E-07 52.3 7.9 94 74-189 168-268 (344)
321 3ip1_A Alcohol dehydrogenase, 96.3 0.027 9.4E-07 50.7 10.9 96 74-190 210-318 (404)
322 4ej6_A Putative zinc-binding d 96.2 0.03 1E-06 49.9 10.5 94 74-189 179-283 (370)
323 3uko_A Alcohol dehydrogenase c 96.2 0.012 4.2E-07 52.5 8.0 95 74-190 190-295 (378)
324 4dvj_A Putative zinc-dependent 96.2 0.018 6E-07 51.3 8.7 92 77-189 171-269 (363)
325 1kol_A Formaldehyde dehydrogen 96.2 0.034 1.2E-06 49.9 10.7 102 74-189 182-299 (398)
326 4b7c_A Probable oxidoreductase 96.1 0.042 1.5E-06 48.0 10.9 95 73-189 145-247 (336)
327 3goh_A Alcohol dehydrogenase, 96.1 0.014 4.8E-07 50.6 7.5 89 74-189 139-228 (315)
328 1g60_A Adenine-specific methyl 96.1 0.0073 2.5E-07 51.3 5.5 45 76-122 211-255 (260)
329 4a2c_A Galactitol-1-phosphate 96.0 0.024 8.4E-07 49.7 9.0 99 74-190 157-260 (346)
330 1cdo_A Alcohol dehydrogenase; 96.0 0.048 1.6E-06 48.4 10.9 94 74-189 189-293 (374)
331 1pqw_A Polyketide synthase; ro 96.0 0.014 4.9E-07 46.9 6.6 94 74-189 35-136 (198)
332 2c7p_A Modification methylase 96.0 0.22 7.4E-06 43.7 14.6 121 78-218 11-143 (327)
333 1p0f_A NADP-dependent alcohol 96.0 0.06 2E-06 47.8 11.2 94 74-189 188-292 (373)
334 2jhf_A Alcohol dehydrogenase E 95.9 0.06 2.1E-06 47.8 11.2 94 74-189 188-292 (374)
335 1vj0_A Alcohol dehydrogenase, 95.9 0.041 1.4E-06 49.2 9.9 93 75-189 193-297 (380)
336 2fzw_A Alcohol dehydrogenase c 95.9 0.07 2.4E-06 47.3 11.3 94 74-189 187-291 (373)
337 1e3i_A Alcohol dehydrogenase, 95.9 0.027 9.1E-07 50.2 8.4 94 74-189 192-296 (376)
338 3g7u_A Cytosine-specific methy 95.8 0.025 8.6E-07 50.8 8.2 102 79-193 3-123 (376)
339 2j3h_A NADP-dependent oxidored 95.8 0.07 2.4E-06 46.7 10.9 95 74-189 152-254 (345)
340 3c85_A Putative glutathione-re 95.8 0.067 2.3E-06 42.3 9.7 93 78-191 39-140 (183)
341 3l9w_A Glutathione-regulated p 95.7 0.046 1.6E-06 49.6 9.3 93 78-191 4-103 (413)
342 2d8a_A PH0655, probable L-thre 95.7 0.064 2.2E-06 47.1 10.1 91 77-189 167-266 (348)
343 1id1_A Putative potassium chan 95.7 0.094 3.2E-06 40.2 9.9 97 78-192 3-107 (153)
344 1lss_A TRK system potassium up 95.6 0.11 3.8E-06 38.6 9.9 91 79-190 5-102 (140)
345 1v3u_A Leukotriene B4 12- hydr 95.6 0.12 4.1E-06 45.0 11.4 94 74-189 142-243 (333)
346 2g1u_A Hypothetical protein TM 95.5 0.031 1.1E-06 43.2 6.7 100 73-192 14-120 (155)
347 3llv_A Exopolyphosphatase-rela 95.5 0.12 4.3E-06 38.8 9.9 92 78-191 6-104 (141)
348 1piw_A Hypothetical zinc-type 95.5 0.022 7.4E-07 50.5 6.3 96 74-189 176-275 (360)
349 3gms_A Putative NADPH:quinone 95.5 0.022 7.6E-07 50.0 6.3 94 74-190 141-243 (340)
350 2vhw_A Alanine dehydrogenase; 95.5 0.06 2E-06 48.2 9.2 100 77-191 167-268 (377)
351 1rjw_A ADH-HT, alcohol dehydro 95.5 0.076 2.6E-06 46.5 9.7 94 74-189 161-260 (339)
352 3l4b_C TRKA K+ channel protien 95.4 0.081 2.8E-06 43.2 9.3 91 80-190 2-99 (218)
353 1jvb_A NAD(H)-dependent alcoho 95.4 0.054 1.8E-06 47.6 8.4 96 74-189 167-270 (347)
354 2py6_A Methyltransferase FKBM; 95.3 0.031 1.1E-06 50.6 7.0 48 76-123 225-274 (409)
355 3qwb_A Probable quinone oxidor 95.3 0.082 2.8E-06 46.1 9.5 93 74-189 145-246 (334)
356 1pjc_A Protein (L-alanine dehy 95.3 0.068 2.3E-06 47.5 8.8 98 77-188 166-265 (361)
357 3fbg_A Putative arginate lyase 95.2 0.062 2.1E-06 47.2 8.4 90 77-188 150-246 (346)
358 1yqd_A Sinapyl alcohol dehydro 95.2 0.055 1.9E-06 48.0 8.1 94 75-189 184-281 (366)
359 3gaz_A Alcohol dehydrogenase s 95.2 0.058 2E-06 47.4 8.0 93 74-189 147-245 (343)
360 3jyn_A Quinone oxidoreductase; 95.1 0.089 3.1E-06 45.7 9.0 94 74-190 137-239 (325)
361 2hcy_A Alcohol dehydrogenase 1 95.1 0.098 3.3E-06 45.9 9.3 95 74-189 166-268 (347)
362 2c0c_A Zinc binding alcohol de 95.1 0.14 4.7E-06 45.3 10.2 93 74-189 160-260 (362)
363 4eye_A Probable oxidoreductase 95.0 0.1 3.5E-06 45.8 9.2 93 74-189 156-256 (342)
364 2dq4_A L-threonine 3-dehydroge 95.0 0.059 2E-06 47.3 7.5 92 74-189 162-261 (343)
365 3p2y_A Alanine dehydrogenase/p 95.0 0.049 1.7E-06 48.9 7.0 42 77-119 183-225 (381)
366 2hwk_A Helicase NSP2; rossman 94.9 0.037 1.3E-06 47.4 5.6 113 86-227 150-280 (320)
367 2cf5_A Atccad5, CAD, cinnamyl 94.8 0.052 1.8E-06 48.0 6.7 95 75-189 177-274 (357)
368 4dio_A NAD(P) transhydrogenase 94.8 0.079 2.7E-06 47.9 7.9 43 77-120 189-232 (405)
369 3nx4_A Putative oxidoreductase 94.8 0.13 4.5E-06 44.5 9.1 88 80-189 149-240 (324)
370 2eez_A Alanine dehydrogenase; 94.7 0.13 4.4E-06 45.8 9.1 100 77-191 165-266 (369)
371 1boo_A Protein (N-4 cytosine-s 94.7 0.041 1.4E-06 48.2 5.6 63 131-193 12-87 (323)
372 3ggo_A Prephenate dehydrogenas 94.6 0.14 4.7E-06 44.6 8.9 95 78-192 33-129 (314)
373 4h0n_A DNMT2; SAH binding, tra 94.6 0.35 1.2E-05 42.5 11.4 120 79-218 4-139 (333)
374 2eih_A Alcohol dehydrogenase; 94.6 0.093 3.2E-06 46.0 7.7 93 74-189 163-264 (343)
375 1yb5_A Quinone oxidoreductase; 94.5 0.11 3.8E-06 45.8 8.1 93 74-189 167-268 (351)
376 4dup_A Quinone oxidoreductase; 94.4 0.2 6.7E-06 44.1 9.4 94 74-190 164-265 (353)
377 1qor_A Quinone oxidoreductase; 94.4 0.2 6.7E-06 43.5 9.3 94 74-189 137-238 (327)
378 3qv2_A 5-cytosine DNA methyltr 94.3 0.47 1.6E-05 41.5 11.5 121 78-218 10-150 (327)
379 2zig_A TTHA0409, putative modi 94.2 0.059 2E-06 46.5 5.5 61 132-192 20-99 (297)
380 1wly_A CAAR, 2-haloacrylate re 94.2 0.12 4E-06 45.1 7.4 94 74-189 142-243 (333)
381 2j8z_A Quinone oxidoreductase; 94.1 0.28 9.4E-06 43.2 9.8 94 74-189 159-260 (354)
382 1iz0_A Quinone oxidoreductase; 94.1 0.11 3.9E-06 44.5 7.2 90 75-188 123-216 (302)
383 2b5w_A Glucose dehydrogenase; 94.1 0.18 6E-06 44.5 8.5 92 79-190 174-273 (357)
384 3gqv_A Enoyl reductase; medium 94.1 0.11 3.7E-06 46.2 7.0 90 76-188 163-261 (371)
385 1l7d_A Nicotinamide nucleotide 93.9 0.14 4.8E-06 45.8 7.6 44 77-122 171-215 (384)
386 2zb4_A Prostaglandin reductase 93.7 0.41 1.4E-05 42.0 10.2 95 74-189 155-259 (357)
387 2qrv_A DNA (cytosine-5)-methyl 93.5 0.25 8.5E-06 42.7 8.1 69 77-157 15-91 (295)
388 3hwr_A 2-dehydropantoate 2-red 93.4 0.54 1.8E-05 40.7 10.3 96 77-190 18-120 (318)
389 1x13_A NAD(P) transhydrogenase 93.4 0.16 5.5E-06 45.8 7.0 42 77-119 171-213 (401)
390 1h2b_A Alcohol dehydrogenase; 93.3 0.28 9.6E-06 43.2 8.4 93 74-189 183-284 (359)
391 2aef_A Calcium-gated potassium 93.1 0.39 1.4E-05 39.4 8.6 94 77-193 8-108 (234)
392 1tt7_A YHFP; alcohol dehydroge 93.1 0.2 6.8E-06 43.5 7.0 92 75-189 147-246 (330)
393 4e21_A 6-phosphogluconate dehy 93.0 0.7 2.4E-05 41.0 10.5 94 77-193 21-117 (358)
394 2dpo_A L-gulonate 3-dehydrogen 93.0 0.39 1.3E-05 41.9 8.7 105 78-192 6-125 (319)
395 2vz8_A Fatty acid synthase; tr 93.0 0.019 6.5E-07 63.2 0.2 100 77-188 1240-1346(2512)
396 3tqh_A Quinone oxidoreductase; 93.0 0.36 1.2E-05 41.7 8.4 92 74-189 149-244 (321)
397 1xa0_A Putative NADPH dependen 92.9 0.25 8.5E-06 42.8 7.4 95 75-189 146-245 (328)
398 1g60_A Adenine-specific methyl 92.9 0.06 2E-06 45.5 3.2 58 133-190 4-74 (260)
399 3me5_A Cytosine-specific methy 92.9 1.8 6.2E-05 39.9 13.3 124 78-217 88-249 (482)
400 3trk_A Nonstructural polyprote 92.9 0.2 7E-06 42.4 6.2 81 147-239 209-299 (324)
401 2ew2_A 2-dehydropantoate 2-red 92.8 0.65 2.2E-05 39.5 9.8 97 79-188 4-106 (316)
402 1boo_A Protein (N-4 cytosine-s 92.8 0.034 1.2E-06 48.7 1.6 60 77-144 252-311 (323)
403 1eg2_A Modification methylase 92.7 0.077 2.6E-06 46.4 3.7 62 131-192 36-108 (319)
404 4g65_A TRK system potassium up 92.7 0.16 5.5E-06 46.7 6.1 64 79-155 4-74 (461)
405 2vn8_A Reticulon-4-interacting 92.7 0.89 3E-05 40.1 10.8 93 75-189 181-279 (375)
406 2f1k_A Prephenate dehydrogenas 92.7 0.38 1.3E-05 40.5 8.0 88 80-191 2-91 (279)
407 2cdc_A Glucose dehydrogenase g 92.6 0.38 1.3E-05 42.4 8.2 89 78-189 181-277 (366)
408 3krt_A Crotonyl COA reductase; 92.5 0.48 1.6E-05 43.2 9.0 103 74-189 225-343 (456)
409 3oig_A Enoyl-[acyl-carrier-pro 92.5 1.3 4.4E-05 36.8 11.0 75 77-158 6-96 (266)
410 2g5c_A Prephenate dehydrogenas 92.4 0.49 1.7E-05 39.9 8.4 93 79-192 2-97 (281)
411 3guy_A Short-chain dehydrogena 92.4 3.7 0.00013 33.1 14.4 70 79-158 2-81 (230)
412 4a27_A Synaptic vesicle membra 92.3 0.33 1.1E-05 42.5 7.3 93 73-190 138-238 (349)
413 1rjd_A PPM1P, carboxy methyl t 92.2 0.93 3.2E-05 39.8 10.1 112 77-192 97-235 (334)
414 3ubt_Y Modification methylase 92.2 0.39 1.3E-05 41.6 7.6 119 80-218 2-133 (331)
415 1bg6_A N-(1-D-carboxylethyl)-L 92.1 0.67 2.3E-05 40.4 9.1 98 79-187 5-106 (359)
416 3hn2_A 2-dehydropantoate 2-red 92.1 0.37 1.3E-05 41.6 7.3 96 79-188 3-101 (312)
417 3b1f_A Putative prephenate deh 91.8 0.53 1.8E-05 39.9 7.9 93 79-192 7-102 (290)
418 3mog_A Probable 3-hydroxybutyr 91.8 0.41 1.4E-05 44.2 7.6 105 78-193 5-123 (483)
419 4e12_A Diketoreductase; oxidor 91.7 0.19 6.6E-06 42.8 5.0 104 79-192 5-123 (283)
420 4a0s_A Octenoyl-COA reductase/ 91.7 0.37 1.3E-05 43.8 7.1 96 74-189 217-335 (447)
421 3i83_A 2-dehydropantoate 2-red 91.7 0.91 3.1E-05 39.2 9.4 96 79-190 3-105 (320)
422 3v8b_A Putative dehydrogenase, 91.6 2.1 7.3E-05 36.1 11.5 84 64-158 18-114 (283)
423 3iht_A S-adenosyl-L-methionine 91.2 0.27 9.3E-06 38.3 4.7 100 77-189 40-146 (174)
424 3v2g_A 3-oxoacyl-[acyl-carrier 91.1 3 0.0001 34.9 11.9 121 61-189 15-164 (271)
425 3gt0_A Pyrroline-5-carboxylate 91.0 0.31 1.1E-05 40.5 5.5 91 79-190 3-97 (247)
426 3tri_A Pyrroline-5-carboxylate 90.9 0.65 2.2E-05 39.5 7.5 88 79-187 4-95 (280)
427 3sju_A Keto reductase; short-c 90.8 1.8 6.1E-05 36.4 10.2 75 77-158 23-110 (279)
428 3h7a_A Short chain dehydrogena 90.7 1.5 5.3E-05 36.2 9.5 74 77-158 6-92 (252)
429 3c24_A Putative oxidoreductase 90.6 0.79 2.7E-05 38.8 7.8 86 79-190 12-100 (286)
430 4e6p_A Probable sorbitol dehyd 90.5 2.7 9.2E-05 34.7 11.0 72 77-158 7-91 (259)
431 3gg2_A Sugar dehydrogenase, UD 90.2 3.1 0.00011 37.9 11.8 108 79-192 3-123 (450)
432 1zcj_A Peroxisomal bifunctiona 90.1 3.4 0.00012 37.7 12.1 103 78-192 37-152 (463)
433 2hmt_A YUAA protein; RCK, KTN, 90.0 1.3 4.4E-05 32.6 7.8 92 78-190 6-104 (144)
434 2qyt_A 2-dehydropantoate 2-red 90.0 1.1 3.6E-05 38.3 8.2 99 79-190 9-116 (317)
435 3grk_A Enoyl-(acyl-carrier-pro 89.9 3.6 0.00012 34.8 11.5 73 77-158 30-118 (293)
436 3o38_A Short chain dehydrogena 89.9 2 7E-05 35.5 9.7 75 77-158 21-110 (266)
437 3lyl_A 3-oxoacyl-(acyl-carrier 89.8 2.5 8.4E-05 34.5 10.0 74 78-158 5-91 (247)
438 4gua_A Non-structural polyprot 89.8 0.73 2.5E-05 43.0 7.1 70 146-227 218-295 (670)
439 3ius_A Uncharacterized conserv 89.7 2.4 8.1E-05 35.3 10.0 65 79-158 6-72 (286)
440 3d1l_A Putative NADP oxidoredu 89.7 0.98 3.3E-05 37.7 7.5 90 79-192 11-103 (266)
441 4eso_A Putative oxidoreductase 89.5 2.7 9.1E-05 34.8 10.0 72 77-158 7-91 (255)
442 3h2s_A Putative NADH-flavin re 89.4 2.2 7.4E-05 34.1 9.2 96 80-188 2-102 (224)
443 2rir_A Dipicolinate synthase, 89.4 2.7 9.2E-05 35.9 10.2 90 77-192 156-247 (300)
444 1lnq_A MTHK channels, potassiu 89.4 1.4 4.7E-05 38.3 8.5 92 78-192 115-213 (336)
445 3rc1_A Sugar 3-ketoreductase; 89.4 1.9 6.6E-05 37.6 9.5 69 78-159 27-99 (350)
446 3ic5_A Putative saccharopine d 89.2 0.87 3E-05 32.3 6.0 66 78-157 5-77 (118)
447 3ce6_A Adenosylhomocysteinase; 89.2 0.54 1.8E-05 43.6 5.9 91 75-192 271-362 (494)
448 1zsy_A Mitochondrial 2-enoyl t 89.1 2.5 8.4E-05 36.9 10.0 93 74-189 164-269 (357)
449 3l77_A Short-chain alcohol deh 89.1 3.5 0.00012 33.3 10.4 75 78-158 2-89 (235)
450 2zyd_A 6-phosphogluconate dehy 89.1 1.8 6.2E-05 39.8 9.4 99 77-193 14-115 (480)
451 2iz1_A 6-phosphogluconate dehy 88.9 1.6 5.5E-05 40.0 8.9 97 79-193 6-105 (474)
452 3f9i_A 3-oxoacyl-[acyl-carrier 88.9 2.2 7.6E-05 34.9 9.1 72 77-158 13-93 (249)
453 3ktd_A Prephenate dehydrogenas 88.9 0.43 1.5E-05 42.1 4.8 92 78-193 8-103 (341)
454 3tjr_A Short chain dehydrogena 88.8 2.6 8.8E-05 35.9 9.7 75 77-158 30-117 (301)
455 3pxx_A Carveol dehydrogenase; 88.8 5.5 0.00019 33.2 11.7 75 77-158 9-108 (287)
456 3ghy_A Ketopantoate reductase 88.8 0.39 1.3E-05 41.9 4.4 95 79-188 4-102 (335)
457 3d4o_A Dipicolinate synthase s 88.7 3.3 0.00011 35.2 10.2 90 77-192 154-245 (293)
458 3k6j_A Protein F01G10.3, confi 88.7 1.7 5.7E-05 39.9 8.7 105 78-193 54-169 (460)
459 3qsg_A NAD-binding phosphogluc 88.7 4.3 0.00015 34.8 11.1 91 78-193 24-119 (312)
460 1pgj_A 6PGDH, 6-PGDH, 6-phosph 88.7 1.3 4.4E-05 40.8 8.1 99 80-192 3-104 (478)
461 3tfo_A Putative 3-oxoacyl-(acy 88.6 2.5 8.4E-05 35.4 9.3 74 78-158 4-90 (264)
462 3cea_A MYO-inositol 2-dehydrog 88.6 1.3 4.3E-05 38.5 7.7 70 78-158 8-80 (346)
463 2gn4_A FLAA1 protein, UDP-GLCN 88.4 1.3 4.5E-05 38.5 7.7 73 77-158 20-100 (344)
464 4hkt_A Inositol 2-dehydrogenas 88.4 1.6 5.4E-05 37.7 8.2 67 79-159 4-73 (331)
465 2o3j_A UDP-glucose 6-dehydroge 88.3 2.2 7.4E-05 39.3 9.3 108 79-190 10-134 (481)
466 1y1p_A ARII, aldehyde reductas 88.3 1.5 5.2E-05 37.4 7.9 77 76-158 9-92 (342)
467 3lf2_A Short chain oxidoreduct 88.2 4 0.00014 33.8 10.3 77 77-158 7-96 (265)
468 4dqx_A Probable oxidoreductase 88.2 4.6 0.00016 33.9 10.8 72 77-158 26-110 (277)
469 3ged_A Short-chain dehydrogena 88.2 4.1 0.00014 34.0 10.2 69 79-158 3-84 (247)
470 4g65_A TRK system potassium up 88.2 1.4 4.6E-05 40.4 7.8 67 77-155 234-306 (461)
471 3g0o_A 3-hydroxyisobutyrate de 88.1 1.9 6.7E-05 36.7 8.5 93 78-193 7-104 (303)
472 3ucx_A Short chain dehydrogena 88.1 4.8 0.00016 33.3 10.7 73 77-157 10-96 (264)
473 3ioy_A Short-chain dehydrogena 88.0 3.8 0.00013 35.2 10.3 77 77-158 7-96 (319)
474 3ijr_A Oxidoreductase, short c 87.9 6 0.0002 33.4 11.4 74 78-158 47-134 (291)
475 3gvc_A Oxidoreductase, probabl 87.9 3.2 0.00011 34.8 9.6 72 77-158 28-112 (277)
476 4had_A Probable oxidoreductase 87.8 0.8 2.8E-05 39.9 5.9 72 78-160 23-97 (350)
477 3pi7_A NADH oxidoreductase; gr 87.7 2.1 7.3E-05 37.2 8.6 90 77-189 163-262 (349)
478 3n74_A 3-ketoacyl-(acyl-carrie 87.7 4.8 0.00016 33.0 10.5 71 77-158 8-92 (261)
479 3q2i_A Dehydrogenase; rossmann 87.5 1.4 4.7E-05 38.5 7.3 70 78-159 13-85 (354)
480 3qiv_A Short-chain dehydrogena 87.5 2.8 9.6E-05 34.3 8.9 75 77-158 8-95 (253)
481 3l6e_A Oxidoreductase, short-c 87.4 4.1 0.00014 33.2 9.8 71 78-158 3-86 (235)
482 1eg2_A Modification methylase 87.4 0.75 2.6E-05 40.1 5.3 45 76-122 241-288 (319)
483 2y0c_A BCEC, UDP-glucose dehyd 87.3 2 6.8E-05 39.5 8.4 109 78-192 8-129 (478)
484 4gwg_A 6-phosphogluconate dehy 87.0 3.9 0.00013 37.7 10.2 98 79-193 5-105 (484)
485 3uf0_A Short-chain dehydrogena 87.0 4.8 0.00017 33.6 10.2 74 77-158 30-115 (273)
486 1zkd_A DUF185; NESG, RPR58, st 86.9 0.73 2.5E-05 41.3 5.1 44 78-121 81-131 (387)
487 3rwb_A TPLDH, pyridoxal 4-dehy 86.9 3.6 0.00012 33.8 9.2 72 77-158 5-89 (247)
488 4fc7_A Peroxisomal 2,4-dienoyl 86.8 4.3 0.00015 33.9 9.8 76 77-158 26-114 (277)
489 2jah_A Clavulanic acid dehydro 86.8 6.1 0.00021 32.3 10.5 75 77-158 6-93 (247)
490 3r1i_A Short-chain type dehydr 86.7 2.7 9.3E-05 35.3 8.4 75 77-158 31-118 (276)
491 4ezb_A Uncharacterized conserv 86.6 4.2 0.00014 35.0 9.7 88 79-193 25-123 (317)
492 3db2_A Putative NADPH-dependen 86.4 4 0.00014 35.5 9.6 70 78-160 5-77 (354)
493 3f1l_A Uncharacterized oxidore 86.3 7.4 0.00025 31.9 10.9 76 77-158 11-101 (252)
494 3k96_A Glycerol-3-phosphate de 86.2 2.2 7.7E-05 37.6 7.9 99 78-191 29-133 (356)
495 3euw_A MYO-inositol dehydrogen 86.2 2.6 9E-05 36.5 8.3 69 78-159 4-75 (344)
496 4fgs_A Probable dehydrogenase 86.0 6.1 0.00021 33.4 10.2 72 77-158 28-112 (273)
497 1geg_A Acetoin reductase; SDR 86.0 6.5 0.00022 32.2 10.3 73 79-158 3-88 (256)
498 1lld_A L-lactate dehydrogenase 85.9 9.6 0.00033 32.4 11.7 36 78-115 7-46 (319)
499 3vrd_B FCCB subunit, flavocyto 85.9 0.65 2.2E-05 41.1 4.2 34 78-111 2-37 (401)
500 3op4_A 3-oxoacyl-[acyl-carrier 85.7 4.5 0.00016 33.2 9.2 72 77-158 8-92 (248)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=1.6e-33 Score=246.25 Aligned_cols=214 Identities=14% Similarity=0.187 Sum_probs=169.5
Q ss_pred CCCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCCC--CCCCcEEEEc
Q 035593 8 ADDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPPI--LPPGPIGILG 85 (269)
Q Consensus 8 ~~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~l--~~~~~VL~iG 85 (269)
..-.++|++++|+||+|.|+++.. | +|+|++|+ .+|+.. .-++.|++.|++.|.+ .+|++||+||
T Consensus 25 ~~v~~vl~~~~S~yQ~i~v~~s~~-----~--G~~L~LDg--~~q~te----~De~~YhE~l~h~~l~~~p~pk~VLIiG 91 (294)
T 3o4f_A 25 FAVDNVLYHEKTDHQDLIIFENAA-----F--GRVMALDG--VVQTTE----RDEFIYHEMMTHVPLLAHGHAKHVLIIG 91 (294)
T ss_dssp EEESEEEEEEC---CCEEEEEETT-----T--EEEEEETT--EEEEET----TTHHHHHHHHHHHHHHHSSCCCEEEEES
T ss_pred EEEeeEEEeccCCCceEEEEEcCC-----c--ceEEEECC--chhhcc----ccHHHHHHHHHHHHHhhCCCCCeEEEEC
Confidence 344589999999999999999975 3 79999999 789864 3568899998765542 3589999999
Q ss_pred CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCCCC
Q 035593 86 FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKGSL 163 (269)
Q Consensus 86 ~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~~~ 163 (269)
+|+|.++++++++.+..+|++|||||+|+++|+++|.....+..+++|++++++||+.+ ...++||+|++|++++...
T Consensus 92 gGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~ 171 (294)
T 3o4f_A 92 GGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGP 171 (294)
T ss_dssp CTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCT
T ss_pred CCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCCC
Confidence 99999999999976677999999999999999999842111234589999999999999 5677999999999998777
Q ss_pred CCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceE--EEEcCCC--Cc-eEEEE
Q 035593 164 LSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLY--VLSLGNR--KD-DSLIA 238 (269)
Q Consensus 164 ~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~--~~~~~~~--~n-~v~~~ 238 (269)
+..|++.+||+.++++|+|||+++++..++.. + ...+..+.++++++|+ .+. ...++.. +. ...+|
T Consensus 172 ~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~-------~-~~~~~~~~~~l~~~F~-~v~~~~~~vPty~~g~w~f~~a 242 (294)
T 3o4f_A 172 GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFL-------Q-QEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWA 242 (294)
T ss_dssp TCCSSCCHHHHHHHHTEEEEEEEEEEEEESSS-------C-CHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSCEEEEEE
T ss_pred chhhcCHHHHHHHHHHhCCCCEEEEecCCccc-------C-hHHHHHHHHHHHhhCC-ceeeeeeeeccCCCcceeheeE
Confidence 77899999999999999999999999877653 1 3457788999999997 443 3344432 33 34667
Q ss_pred ecCCC
Q 035593 239 LTGEL 243 (269)
Q Consensus 239 ~~~~~ 243 (269)
++.+.
T Consensus 243 s~~~~ 247 (294)
T 3o4f_A 243 TDNDA 247 (294)
T ss_dssp ESCTT
T ss_pred ECCCc
Confidence 76653
No 2
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.98 E-value=4.5e-31 Score=233.77 Aligned_cols=213 Identities=23% Similarity=0.250 Sum_probs=172.9
Q ss_pred cCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCC--cccchHHHHHhcCCCC----CC-CC--cEEEEcCccc
Q 035593 19 SRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFR--SLTNTYFDAFATLPPI----LP-PG--PIGILGFGAG 89 (269)
Q Consensus 19 s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~--~l~~~y~~~~~~~~~l----~~-~~--~VL~iG~G~G 89 (269)
..|..++++.... +.+ +|+|++|+ .+||.+.+++ .+++.|++.|++.+.+ .+ ++ +||+||||+|
T Consensus 29 ~~~~~~~~~~d~~---~~~--g~~L~lDG--~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G 101 (317)
T 3gjy_A 29 GEYSVIELEADSY---TTD--GWLISING--VPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGAC 101 (317)
T ss_dssp CSSSEEEEEECSS---STT--EEEEEETT--EEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGG
T ss_pred ceeeeEEEEecCC---CCc--eEEEEECC--EeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcC
Confidence 4566677776543 233 89999999 7999998775 4789999999765543 23 44 9999999999
Q ss_pred HHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c--cCCCeeEEEEcCCCCCCCCCC
Q 035593 90 SAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S--LKDGFSGILVDLFSKGSLLSE 166 (269)
Q Consensus 90 ~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~--~~~~yD~I~~d~~~~~~~~~~ 166 (269)
.+++++++++|+.+|++|||||+|+++||++|.... ++|++++++|++++ . ..++||+|++|++.+...+.+
T Consensus 102 ~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-----~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~ 176 (317)
T 3gjy_A 102 TMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-----APRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQN 176 (317)
T ss_dssp HHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-----TTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGG
T ss_pred HHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-----CCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchh
Confidence 999999998899999999999999999999997643 68999999999998 2 357899999999887666678
Q ss_pred CCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEEc------CCCCceEEEEec
Q 035593 167 LEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLSL------GNRKDDSLIALT 240 (269)
Q Consensus 167 l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~------~~~~n~v~~~~~ 240 (269)
+++.+||+.++++|+|||++++|..+... ...+++++++|+++|+ ++..+.. ...+|.|++|++
T Consensus 177 L~t~efl~~~~r~LkpgGvlv~~~~~~~~---------~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~Vl~As~ 246 (317)
T 3gjy_A 177 FTTVEFFEHCHRGLAPGGLYVANCGDHSD---------LRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNIILMGSD 246 (317)
T ss_dssp GSBHHHHHHHHHHEEEEEEEEEEEEECTT---------CHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEEEEEES
T ss_pred hhHHHHHHHHHHhcCCCcEEEEEecCCcc---------hHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEEEEEEC
Confidence 88999999999999999999999975421 2457889999999997 6776643 145799999999
Q ss_pred CCCCC-----HHHHHHhc
Q 035593 241 GELPD-----LDDWKRAL 253 (269)
Q Consensus 241 ~~~~~-----~~~~~~~l 253 (269)
.+.+. .+++.+++
T Consensus 247 ~plp~~~~~~~~~l~r~~ 264 (317)
T 3gjy_A 247 TEFFSSNSTEASAITREL 264 (317)
T ss_dssp SCCCCTTSHHHHHHHHHH
T ss_pred CCCCcccccchHHHHHHH
Confidence 99876 35555544
No 3
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.96 E-value=6e-29 Score=223.49 Aligned_cols=188 Identities=15% Similarity=0.143 Sum_probs=149.7
Q ss_pred CccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCCCC-CCCcEEEEcCcc
Q 035593 10 DVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPPIL-PPGPIGILGFGA 88 (269)
Q Consensus 10 ~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~l~-~~~~VL~iG~G~ 88 (269)
-.++||+++|+||+|.|+|++. | +|+|++|+ .+|+... .+.|++.|++.+.+. ++++||+||+|.
T Consensus 151 v~~vl~~~~S~yQ~I~V~es~~-----~--Gr~L~LDG--~~Q~te~-----D~~Y~e~l~h~~l~~~~pkrVLIIGgGd 216 (381)
T 3c6k_A 151 IDEVVYDEDSPYQNIKILHSKQ-----F--GNILILSG--DVNLAES-----DLAYTRAIMGSGKEDYTGKDVLILGGGD 216 (381)
T ss_dssp EEEEEEEEECSSCEEEEEEETT-----T--EEEEEETT--EEEEETT-----CHHHHHHHTTTTCCCCTTCEEEEEECTT
T ss_pred eEEEEEeCCCCCceEEEEEcCC-----c--ceEEEECC--ceeeeCC-----hHHHHHHHHHHHhhcCCCCeEEEECCCc
Confidence 3588999999999999999975 4 79999998 7998752 256999987766544 589999999999
Q ss_pred cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccC---CCCcEEEEEcccccc-c----cCCCeeEEEEcCCCC
Q 035593 89 GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKS---YPDRLFVYVGNALKA-S----LKDGFSGILVDLFSK 160 (269)
Q Consensus 89 G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~---~~~rv~~~~~D~~~~-~----~~~~yD~I~~d~~~~ 160 (269)
|..+++++++ +..+|++|||||+|+++|+++|........ .++|++++++||+.| . ..++||+|++|++++
T Consensus 217 G~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~ 295 (381)
T 3c6k_A 217 GGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAV 295 (381)
T ss_dssp CHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSS
T ss_pred HHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCC
Confidence 9999999985 568999999999999999999853211111 246799999999998 2 456899999998875
Q ss_pred CCC------CCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcC
Q 035593 161 GSL------LSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGK 221 (269)
Q Consensus 161 ~~~------~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 221 (269)
... ...+++.+||+.++++|+|||+++++..++.. ...+..+.++++++|+.
T Consensus 296 ~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~---------~~~~~~i~~tl~~vF~~ 353 (381)
T 3c6k_A 296 PISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL---------TEALSLYEEQLGRLYCP 353 (381)
T ss_dssp CCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC---------HHHHHHHHHHHTTSSSC
T ss_pred cccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcc---------hhHHHHHHHHHHHhCCc
Confidence 321 12467889999999999999999998765532 23467888999999973
No 4
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.96 E-value=3.6e-28 Score=212.38 Aligned_cols=209 Identities=16% Similarity=0.213 Sum_probs=161.3
Q ss_pred CccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCCC--CCCCcEEEEcCc
Q 035593 10 DVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPPI--LPPGPIGILGFG 87 (269)
Q Consensus 10 ~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~l--~~~~~VL~iG~G 87 (269)
-.++|++.+|+||.|.|+++.. + +|.|++|+ .+|+... .++.|++.|.+.+.+ .++++||+||||
T Consensus 19 ~~~~l~~~~s~~~~i~v~~~~~-----~--g~~L~ldg--~~q~~~~----de~~y~e~l~~~~l~~~~~~~~VLdiG~G 85 (275)
T 1iy9_A 19 VNKTLHTEQTEFQHLEMVETEE-----F--GNMLFLDG--MVMTSEK----DEFVYHEMVAHVPLFTHPNPEHVLVVGGG 85 (275)
T ss_dssp EEEEEEEEECSSCEEEEEEETT-----T--EEEEEETT--EEEEETT----THHHHHHHHHHHHHHHSSSCCEEEEESCT
T ss_pred eeeEEEEEECCCceEEEEEcCC-----C--CEEEEECC--EEeeccc----chhHHHHHHHHHHHhhCCCCCEEEEECCc
Confidence 4578999999999999999864 2 68999997 6887642 357799877654321 257899999999
Q ss_pred ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCCCCCC
Q 035593 88 AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKGSLLS 165 (269)
Q Consensus 88 ~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~~~~~ 165 (269)
+|.++++++++.+..+|++||+||++++.|++++.... ....++|++++++|++++ ...++||+|++|++.+...+.
T Consensus 86 ~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~-~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~ 164 (275)
T 1iy9_A 86 DGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIA-GKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAV 164 (275)
T ss_dssp TCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHH-TTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCC
T ss_pred hHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhc-cccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcch
Confidence 99999999986567899999999999999999983100 001257999999999987 346789999999987654555
Q ss_pred CCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEE--EcCC--CCc-eEEEEec
Q 035593 166 ELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVL--SLGN--RKD-DSLIALT 240 (269)
Q Consensus 166 ~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~--~~~~--~~n-~v~~~~~ 240 (269)
++++.+|++.++++|+|||+++++..++.. + ......+.++++++|+ .+..+ .++. +++ ..++|++
T Consensus 165 ~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~~F~-~v~~~~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 165 NLFTKGFYAGIAKALKEDGIFVAQTDNPWF-------T-PELITNVQRDVKEIFP-ITKLYTANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp CCSTTHHHHHHHHHEEEEEEEEEECCCTTT-------C-HHHHHHHHHHHHTTCS-EEEEEEECCTTSGGGCEEEEEEES
T ss_pred hhhHHHHHHHHHHhcCCCcEEEEEcCCccc-------c-HHHHHHHHHHHHHhCC-CeEEEEEecCcccCcceEEEEeeC
Confidence 788899999999999999999999765432 1 3467889999999997 44433 3443 233 4566775
Q ss_pred C
Q 035593 241 G 241 (269)
Q Consensus 241 ~ 241 (269)
+
T Consensus 236 ~ 236 (275)
T 1iy9_A 236 K 236 (275)
T ss_dssp S
T ss_pred C
Confidence 4
No 5
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.96 E-value=7.6e-29 Score=218.55 Aligned_cols=215 Identities=15% Similarity=0.195 Sum_probs=155.4
Q ss_pred CCCCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCCC--CCCCcEEEE
Q 035593 7 PADDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPPI--LPPGPIGIL 84 (269)
Q Consensus 7 ~~~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~l--~~~~~VL~i 84 (269)
.....++|++++|+||+|.|++++. + +|+|++|+ .+|+.. ..++.|++.|+..+.+ .++++||+|
T Consensus 24 ~~~~~~~l~~~~s~~q~i~v~~~~~-----~--g~~L~ldg--~~~~~~----~de~~Y~e~l~~~~l~~~~~~~~VLdi 90 (294)
T 3adn_A 24 YFAVDNVLYHEKTDHQDLIIFENAA-----F--GRVMALDG--VVQTTE----RDEFIYHEMMTHVPLLAHGHAKHVLII 90 (294)
T ss_dssp EECCSCEEEEC----CCCEEECCTT-----T--CCEEEETT--EEEEET----TTHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred EEEcccEEEEeECCCceEEEEEcCC-----c--ceEEEECC--eEeecc----CchhHHHHHHHHHHHhcCCCCCEEEEE
Confidence 3456789999999999999999864 2 68899999 688763 3567899888654332 357899999
Q ss_pred cCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCCC
Q 035593 85 GFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKGS 162 (269)
Q Consensus 85 G~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~~ 162 (269)
|||+|.++++++++.+..+|++||+|+++++.|++++.....+...++|++++++|++++ ...++||+|++|++++..
T Consensus 91 G~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~ 170 (294)
T 3adn_A 91 GGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIG 170 (294)
T ss_dssp SCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC-----
T ss_pred eCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccC
Confidence 999999999999976678999999999999999999853211112367999999999998 446789999999987654
Q ss_pred CCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCc-eEEEEcCCC--Cce-EEEE
Q 035593 163 LLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKK-LYVLSLGNR--KDD-SLIA 238 (269)
Q Consensus 163 ~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~-v~~~~~~~~--~n~-v~~~ 238 (269)
....+++.+||+.++++|+|||+++++..++.. . ...+..+.++++++|+.. .+...++.. +.+ .++|
T Consensus 171 ~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~-------~-~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~a 242 (294)
T 3adn_A 171 PGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFL-------Q-QEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWA 242 (294)
T ss_dssp -----CCHHHHHHHHHTEEEEEEEEEEEEECSS-------C-CHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEE
T ss_pred cchhccHHHHHHHHHHhcCCCCEEEEecCCccc-------c-hHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEE
Confidence 455788999999999999999999999865432 1 345788999999999732 333445543 343 4567
Q ss_pred ecCC
Q 035593 239 LTGE 242 (269)
Q Consensus 239 ~~~~ 242 (269)
++.+
T Consensus 243 s~~~ 246 (294)
T 3adn_A 243 TDND 246 (294)
T ss_dssp ESCT
T ss_pred eCCc
Confidence 7654
No 6
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.95 E-value=5.5e-27 Score=210.04 Aligned_cols=192 Identities=16% Similarity=0.172 Sum_probs=146.1
Q ss_pred CCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCCCC-CCCcEEEEcCc
Q 035593 9 DDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPPIL-PPGPIGILGFG 87 (269)
Q Consensus 9 ~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~l~-~~~~VL~iG~G 87 (269)
+-.++|++++|+||+|.|+++.. + +++|++|+ .+|+... + +.|++.|++.+... ++++||+||||
T Consensus 133 ~v~~vl~~~~S~yQ~I~V~es~~-----~--G~~L~LDG--~~q~te~--D---~~YhE~l~~~~~~~p~pkrVL~IGgG 198 (364)
T 2qfm_A 133 DIDEVVYDEDSPYQNIKILHSKQ-----F--GNILILSG--DVNLAES--D---LAYTRAIMGSGKEDYTGKDVLILGGG 198 (364)
T ss_dssp CEEEEEEEEECSSCEEEEEEETT-----T--EEEEEETT--EEEEETT--C---HHHHHHHTTTTCCCCTTCEEEEEECT
T ss_pred EeeeEEEeccCCCeeEEEEEeCC-----c--ceEEEECC--EEeeecC--c---hHHHHHHhhhhhhCCCCCEEEEEECC
Confidence 34588999999999999999874 3 68999999 7888751 2 68999887665433 48999999999
Q ss_pred ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCC---CcEEEEEcccccc-c----cCCCeeEEEEcCCC
Q 035593 88 AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYP---DRLFVYVGNALKA-S----LKDGFSGILVDLFS 159 (269)
Q Consensus 88 ~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~---~rv~~~~~D~~~~-~----~~~~yD~I~~d~~~ 159 (269)
+|.++++++++. ..+|++|||||+++++|+++|........++ +|++++++|++++ . ..++||+||+|+++
T Consensus 199 ~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d 277 (364)
T 2qfm_A 199 DGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTA 277 (364)
T ss_dssp TCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCS
T ss_pred hhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCC
Confidence 999999999864 4899999999999999999986311001123 3899999999998 3 46899999999987
Q ss_pred -CCC-CCCCCCcHHHHHHH----HhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEE
Q 035593 160 -KGS-LLSELEDPNTWEKL----RQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYV 225 (269)
Q Consensus 160 -~~~-~~~~l~~~e~~~~~----~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~ 225 (269)
+.. .+.++++.+||+.+ +++|+|||+++++..+... ........+.+++.|+ .+..
T Consensus 278 ~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~---------~e~~~~~~~~l~~~F~-~v~~ 339 (364)
T 2qfm_A 278 VPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL---------TEALSLYEEQLGRLYC-PVEF 339 (364)
T ss_dssp SCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC---------HHHHHHHHHHHTTSSS-CEEE
T ss_pred cccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch---------HHHHHHHHHHHHHhCC-ceEE
Confidence 433 23368899999999 9999999999999876532 2333333345888997 4444
No 7
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.95 E-value=3e-27 Score=210.26 Aligned_cols=211 Identities=15% Similarity=0.187 Sum_probs=161.7
Q ss_pred CCCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEc
Q 035593 8 ADDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILG 85 (269)
Q Consensus 8 ~~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG 85 (269)
.+..++|++.+|+||.|.|+++.. + +++|++|+ .+|+.. ..++.|++.|.+.+. ..++++||+||
T Consensus 19 ~~~~~vl~~~~s~~q~i~v~~~~~-----~--g~~l~ldg--~~q~~~----~~e~~Y~e~l~~~~l~~~~~~~~VLdiG 85 (314)
T 1uir_A 19 RRMERVIASGKTPFQDYFLFESKG-----F--GKVLILDK--DVQSTE----RDEYIYHETLVHPAMLTHPEPKRVLIVG 85 (314)
T ss_dssp EECSEEEEEEECSSCEEEEEEETT-----T--EEEEEETT--EEEEET----TTHHHHHHHHHHHHHHHSSCCCEEEEEE
T ss_pred EecceEEEEEECCCCCEEEEEcCC-----C--cEEEEECC--EEeeee----cchhHHHHHHHHHHHhcCCCCCeEEEEc
Confidence 345689999999999999999864 2 68999998 789875 245779888764432 23578999999
Q ss_pred CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCc-cccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCC-
Q 035593 86 FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFAL-EKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKG- 161 (269)
Q Consensus 86 ~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~-~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~- 161 (269)
||+|.+++.++++.+..+|++||+||.+++.|++++.. +. +...+++++++++|+.++ ...++||+|++|.+.+.
T Consensus 86 ~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~ 164 (314)
T 1uir_A 86 GGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-GAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVG 164 (314)
T ss_dssp CTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBS
T ss_pred CCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-ccccCCceEEEEchHHHHHHhcCCCccEEEECCCCccc
Confidence 99999999999876678999999999999999998742 11 001257999999999987 45678999999987754
Q ss_pred --CCCCCCCcHHHHHHHHhhccCCcEEEEEecCCC-ccccccccchhHHHHHHHHHHHHHhcCceEEE--EcC--CCCce
Q 035593 162 --SLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSC-VEAEDSRRDGKVVMEATLKAMHKVFGKKLYVL--SLG--NRKDD 234 (269)
Q Consensus 162 --~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~--~~~--~~~n~ 234 (269)
..+..+++.+|++.++++|+|||+++++..++. . + ......+.++++++|+ .+..+ .++ .+.+.
T Consensus 165 ~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-------~-~~~~~~~~~~l~~~F~-~v~~~~~~vP~~~g~~~ 235 (314)
T 1uir_A 165 EDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLT-------H-HRVHPVVHRTVREAFR-YVRSYKNHIPGFFLNFG 235 (314)
T ss_dssp TTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC-----------CHHHHHHHHHHTTCS-EEEEEEEEEGGGTEEEE
T ss_pred ccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcccc-------C-HHHHHHHHHHHHHHCC-ceEEEEEecCCCCCeEE
Confidence 223467789999999999999999999875542 1 1 2357888999999997 44333 233 22345
Q ss_pred EEEEecC
Q 035593 235 SLIALTG 241 (269)
Q Consensus 235 v~~~~~~ 241 (269)
+++|+++
T Consensus 236 ~~~as~~ 242 (314)
T 1uir_A 236 FLLASDA 242 (314)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 6778876
No 8
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.95 E-value=1.5e-26 Score=202.74 Aligned_cols=211 Identities=21% Similarity=0.288 Sum_probs=158.4
Q ss_pred CCCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEc
Q 035593 8 ADDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILG 85 (269)
Q Consensus 8 ~~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG 85 (269)
.+..++|++.+|+||.|.|+++.. + +|.|++|+ .+|+.. ..+..|++.|...+. ..++++|||||
T Consensus 17 ~~~~~~l~~~~s~~~~i~v~~~~~-----~--g~~L~ldg--~~q~~~----~d~~~y~e~l~~~~l~~~~~~~~VLdiG 83 (281)
T 1mjf_A 17 FKIKKKIYEKLSKYQKIEVYETEG-----F--GRLLALDG--TVQLVT----LGERSYHEPLVHPAMLAHPKPKRVLVIG 83 (281)
T ss_dssp ECEEEEEEEEECSSCEEEEEEESS-----S--CEEEEETT--EEEEET----TTTHHHHHHHHHHHHHHSSCCCEEEEEE
T ss_pred EeeccEEEEeeCCCccEEEEECCC-----c--cEEEEECC--Eeeecc----ccchHHHHHHHHHHHhhCCCCCeEEEEc
Confidence 445689999999999999999864 2 68899997 688764 235678887764322 23578999999
Q ss_pred CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCcc-cc----ccCCCCcEEEEEcccccc-ccCCCeeEEEEcCCC
Q 035593 86 FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALE-KL----EKSYPDRLFVYVGNALKA-SLKDGFSGILVDLFS 159 (269)
Q Consensus 86 ~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~-~~----~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~d~~~ 159 (269)
||+|.+++.++++ +..+|++||+||.+++.|++++... .. ....+++++++.+|+.++ ...++||+|++|.+.
T Consensus 84 ~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~fD~Ii~d~~~ 162 (281)
T 1mjf_A 84 GGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGFDVIIADSTD 162 (281)
T ss_dssp CTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCEEEEEEECCC
T ss_pred CCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCeeEEEECCCC
Confidence 9999999999987 7789999999999999999998221 00 000257999999999887 226789999999887
Q ss_pred CCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEE--EcCC--CCceE
Q 035593 160 KGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVL--SLGN--RKDDS 235 (269)
Q Consensus 160 ~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~--~~~~--~~n~v 235 (269)
+...+.++++.+|++.++++|+|||+++++..++.. . ......+.++++++|+ .+..+ .++. +.+.+
T Consensus 163 ~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~~f~-~v~~~~~~vP~~~g~~~~ 233 (281)
T 1mjf_A 163 PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYL-------F-TDELISAYKEMKKVFD-RVYYYSFPVIGYASPWAF 233 (281)
T ss_dssp CC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTT-------S-HHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSEEE
T ss_pred CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc-------C-HHHHHHHHHHHHHHCC-ceEEEEEecCCCCceEEE
Confidence 644445677899999999999999999999755421 1 4467889999999997 44443 2333 23456
Q ss_pred EEEecC
Q 035593 236 LIALTG 241 (269)
Q Consensus 236 ~~~~~~ 241 (269)
++|++.
T Consensus 234 ~~as~~ 239 (281)
T 1mjf_A 234 LVGVKG 239 (281)
T ss_dssp EEEEES
T ss_pred EEeeCC
Confidence 778776
No 9
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.95 E-value=1.5e-26 Score=202.92 Aligned_cols=211 Identities=20% Similarity=0.272 Sum_probs=161.4
Q ss_pred CCCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEc
Q 035593 8 ADDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILG 85 (269)
Q Consensus 8 ~~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG 85 (269)
.+..++|++.+|+||.|.|+++.. + +|+|++|+ .+|+.. ..+..|++.|..++. ..++++||+||
T Consensus 20 ~~~~~~l~~~~s~~q~i~v~~~~~-----~--g~~l~ldg--~~q~~~----~~e~~Y~e~l~~~~l~~~~~~~~VLdiG 86 (283)
T 2i7c_A 20 LKIKKILYETKSKYQNVLVFESTT-----Y--GKVLVLDG--VIQLTE----KDEFAYHEMMTHVPMTVSKEPKNVLVVG 86 (283)
T ss_dssp EEEEEEEEEEECSSSEEEEEEESS-----S--CEEEEETT--EEEEET----TTHHHHHHHHHHHHHTTSSSCCEEEEEE
T ss_pred EecccEEEEEECCCccEEEEEcCC-----C--CEEEEECC--Eeeecc----cchhhHHHHHHHHHHhcCCCCCeEEEEe
Confidence 344688999999999999999864 2 58899998 678753 345778886654332 23578999999
Q ss_pred CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCCCC
Q 035593 86 FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKGSL 163 (269)
Q Consensus 86 ~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~~~ 163 (269)
||+|.+++.++++.+..+|++||+||.+++.|++++..... ...+++++++++|+.++ ...++||+|++|.+.+...
T Consensus 87 ~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~-~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~ 165 (283)
T 2i7c_A 87 GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC-GYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGP 165 (283)
T ss_dssp CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSG-GGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTG
T ss_pred CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcc-ccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCc
Confidence 99999999999866678999999999999999999853210 01257999999999987 3467899999998766433
Q ss_pred CCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceE--EEEcCCC--Cc-eEEEE
Q 035593 164 LSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLY--VLSLGNR--KD-DSLIA 238 (269)
Q Consensus 164 ~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~--~~~~~~~--~n-~v~~~ 238 (269)
...+++.+|++.++++|+|||+++++..++.. + ......+.++++++|+ .+. ...++.. ++ ..++|
T Consensus 166 ~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~~F~-~v~~~~~~vP~y~~g~~g~~~~ 236 (283)
T 2i7c_A 166 AETLFNQNFYEKIYNALKPNGYCVAQCESLWI-------H-VGTIKNMIGYAKKLFK-KVEYANISIPTYPCGCIGILCC 236 (283)
T ss_dssp GGGGSSHHHHHHHHHHEEEEEEEEEECCCTTT-------C-HHHHHHHHHHHHTTCS-EEEEEEEECTTSGGGEEEEEEE
T ss_pred chhhhHHHHHHHHHHhcCCCcEEEEECCCccc-------C-HHHHHHHHHHHHHHCC-ceEEEEEEcCCcCCCcEEEEEE
Confidence 44677899999999999999999999765432 1 3457788999999997 443 4445543 44 35666
Q ss_pred ecC
Q 035593 239 LTG 241 (269)
Q Consensus 239 ~~~ 241 (269)
++.
T Consensus 237 s~~ 239 (283)
T 2i7c_A 237 SKT 239 (283)
T ss_dssp ESS
T ss_pred eCC
Confidence 655
No 10
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.94 E-value=4.4e-26 Score=202.58 Aligned_cols=210 Identities=20% Similarity=0.269 Sum_probs=151.9
Q ss_pred ccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEcCcc
Q 035593 11 VKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILGFGA 88 (269)
Q Consensus 11 ~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG~G~ 88 (269)
.++|++.+|+||.|.|+++.. + ++.|++|+ .+|+.. ..++.|++.+..++. ..++++||+||||+
T Consensus 53 ~~vl~~~~s~~q~i~v~~~~~-----~--g~~l~ldg--~~q~~~----~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~ 119 (314)
T 2b2c_A 53 KKVLFHEKSKYQDVLVFESTT-----Y--GNVLVLDG--IVQATE----RDEFSYQEMLAHLPMFAHPDPKRVLIIGGGD 119 (314)
T ss_dssp EEEEEEEECSSCEEEEEEETT-----T--EEEEEETT--EEEEES----SSSSHHHHHHHHHHHHHSSSCCEEEEESCTT
T ss_pred ccEEEEEECCCCCEEEEEcCC-----C--CEEEEECC--EeecCC----cchhHHHHHHHHHHHhhCCCCCEEEEEcCCc
Confidence 578999999999999999864 2 68899998 678753 345778886654432 23578999999999
Q ss_pred cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCCCCCCC
Q 035593 89 GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKGSLLSE 166 (269)
Q Consensus 89 G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~~~~~~ 166 (269)
|.+++.++++.+..+|++||+||.+++.|++++..... ...+++++++++|+.++ ...++||+|++|++.+......
T Consensus 120 G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~ 198 (314)
T 2b2c_A 120 GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSC-GFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAES 198 (314)
T ss_dssp SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSG-GGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC--------
T ss_pred CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcc-ccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchh
Confidence 99999999876778999999999999999999853100 01257999999999987 4467899999998765433346
Q ss_pred CCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcC-ceEEEEcCCC--Cc-eEEEEecCC
Q 035593 167 LEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGK-KLYVLSLGNR--KD-DSLIALTGE 242 (269)
Q Consensus 167 l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~-~v~~~~~~~~--~n-~v~~~~~~~ 242 (269)
+++.+|++.++++|+|||+++++..++.. + ......+.++++++|++ .++...++.. ++ .+++|++.+
T Consensus 199 l~t~~~l~~~~~~LkpgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~~ 270 (314)
T 2b2c_A 199 LFGQSYYELLRDALKEDGILSSQGESVWL-------H-LPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKNA 270 (314)
T ss_dssp -----HHHHHHHHEEEEEEEEEECCCTTT-------C-HHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred hhHHHHHHHHHhhcCCCeEEEEECCCccc-------C-HHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeCCC
Confidence 67789999999999999999999755432 1 34577889999999973 2333344442 44 367777663
No 11
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.94 E-value=8.3e-26 Score=199.38 Aligned_cols=211 Identities=18% Similarity=0.185 Sum_probs=154.6
Q ss_pred CCCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEc
Q 035593 8 ADDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILG 85 (269)
Q Consensus 8 ~~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG 85 (269)
....++|++.+|+||+|.|+++.. + +|.|++|+ .+|+.. ..++.|++.+...+. ..++.+|||||
T Consensus 32 ~~~~~~l~~~~s~~q~i~v~~~~~-----~--g~~l~ldg--~~~~~~----~de~~y~e~l~~~~l~~~~~~~~VLdiG 98 (296)
T 1inl_A 32 MKMNRVIYSGQSDIQRIDIFENPD-----L--GVVFALDG--ITMTTE----KDEFMYHEMLAHVPMFLHPNPKKVLIIG 98 (296)
T ss_dssp EECSEEEEEEECSSCEEEEEEETT-----T--EEEEEETT--EEEEET----TTHHHHHHHHHHHHHHHSSSCCEEEEEE
T ss_pred eecccEEEEEECCCccEEEEEcCC-----C--cEEEEECC--EEeecc----cchhHHHHHHhHHHHhcCCCCCEEEEEc
Confidence 345689999999999999999864 2 68999997 577653 234678887754322 23478999999
Q ss_pred CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCC-CC
Q 035593 86 FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSK-GS 162 (269)
Q Consensus 86 ~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~-~~ 162 (269)
||+|.++..++++.+..+|++||+|+.+++.|++++.... ....+++++++++|+.++ ...++||+|++|++.+ ..
T Consensus 99 ~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~ 177 (296)
T 1inl_A 99 GGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTS-CGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAG 177 (296)
T ss_dssp CTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHH-GGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC------
T ss_pred CCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhc-cccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccC
Confidence 9999999999986667899999999999999999873200 001257999999999886 3457899999998765 33
Q ss_pred CCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEE--EcCC--CC-ceEEE
Q 035593 163 LLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVL--SLGN--RK-DDSLI 237 (269)
Q Consensus 163 ~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~--~~~~--~~-n~v~~ 237 (269)
....+.+.++++.++++|+|||+++++..++.. + ......+.++++++|+ .+..+ .++. ++ ...++
T Consensus 178 ~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~~F~-~v~~~~~~vp~~p~g~~~f~~ 248 (296)
T 1inl_A 178 QGGHLFTEEFYQACYDALKEDGVFSAETEDPFY-------D-IGWFKLAYRRISKVFP-ITRVYLGFMTTYPSGMWSYTF 248 (296)
T ss_dssp ----CCSHHHHHHHHHHEEEEEEEEEECCCTTT-------T-HHHHHHHHHHHHHHCS-EEEEEEEECTTSTTSEEEEEE
T ss_pred chhhhhHHHHHHHHHHhcCCCcEEEEEccCccc-------C-HHHHHHHHHHHHHHCC-ceEEEEeecCccCCCceEEEE
Confidence 344677899999999999999999999765432 1 3457889999999997 44443 3332 23 34566
Q ss_pred EecC
Q 035593 238 ALTG 241 (269)
Q Consensus 238 ~~~~ 241 (269)
|+++
T Consensus 249 as~~ 252 (296)
T 1inl_A 249 ASKG 252 (296)
T ss_dssp EESS
T ss_pred ecCC
Confidence 7764
No 12
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.94 E-value=1e-25 Score=199.53 Aligned_cols=210 Identities=18% Similarity=0.253 Sum_probs=152.0
Q ss_pred ccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEcCcc
Q 035593 11 VKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILGFGA 88 (269)
Q Consensus 11 ~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG~G~ 88 (269)
.++|++.+|+||+|.|++++. + +|.|.+|+ .+|+.. ..+..|++.+..++. ..++++|||||||+
T Consensus 40 ~~~l~~~~s~~q~i~v~~~~~-----~--g~~L~ldg--~~~~~~----~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~ 106 (304)
T 2o07_A 40 EQLLHHRRSRYQDILVFRSKT-----Y--GNVLVLDG--VIQCTE----RDEFSYQEMIANLPLCSHPNPRKVLIIGGGD 106 (304)
T ss_dssp EEEEEEEECSSSEEEEEEESS-----S--CEEEEETT--EEEEET----TTHHHHHHHHHHHHHTTSSSCCEEEEEECTT
T ss_pred ccEEEEEECCCcEEEEEEcCC-----C--ceEEEECC--EEEeec----ccchHHHHHHHHHHHhhCCCCCEEEEECCCc
Confidence 468999999999999999874 2 68899997 688763 346778877654332 23578999999999
Q ss_pred cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCCCCCCC
Q 035593 89 GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKGSLLSE 166 (269)
Q Consensus 89 G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~~~~~~ 166 (269)
|.+++.++++.+..+|++||+|+++++.|++++.... ....+++++++++|+.++ ...++||+|++|++.+.....+
T Consensus 107 G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~-~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~ 185 (304)
T 2o07_A 107 GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMA-IGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAES 185 (304)
T ss_dssp SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH-GGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC--------
T ss_pred hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhh-cccCCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchh
Confidence 9999999987667899999999999999999974310 001257999999999986 4467899999998765433345
Q ss_pred CCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCc-eEEEEcCCC--Cc-eEEEEecCC
Q 035593 167 LEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKK-LYVLSLGNR--KD-DSLIALTGE 242 (269)
Q Consensus 167 l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~-v~~~~~~~~--~n-~v~~~~~~~ 242 (269)
+.+.+|++.++++|+|||+++++..++.. . ......+.+.++++|+.. +++..++.. +. ..++|++.+
T Consensus 186 l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~as~~~ 257 (304)
T 2o07_A 186 LFKESYYQLMKTALKEDGVLCCQGECQWL-------H-LDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNP 257 (304)
T ss_dssp ---CHHHHHHHHHEEEEEEEEEEEECTTT-------C-HHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred hhHHHHHHHHHhccCCCeEEEEecCCccc-------c-hHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEEeCCc
Confidence 67789999999999999999998755432 1 345678889999999732 222334443 22 346677653
No 13
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.93 E-value=8.3e-25 Score=193.67 Aligned_cols=213 Identities=15% Similarity=0.213 Sum_probs=155.1
Q ss_pred CCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEcC
Q 035593 9 DDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILGF 86 (269)
Q Consensus 9 ~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG~ 86 (269)
...++|++.+|+||.|.|+++... | .+ +|+|++|+ .+|+.. ..+..|++.+..++. ..++.+||||||
T Consensus 35 ~~~~~l~~~~s~~q~i~v~~~~p~-g-~~--g~~l~ldg--~~~~~~----~de~~y~e~l~~~~l~~~~~~~~VLdiG~ 104 (304)
T 3bwc_A 35 RVEKVLYDAPTKFQHLTIFESDPK-G-PW--GTVMALDG--CIQVTD----YDEFVYHEVLGHTSLCSHPKPERVLIIGG 104 (304)
T ss_dssp EEEEEEEEEECSSSEEEEEEECTT-S-SC--CEEEEETT--EEEEET----TTHHHHHHHHHHHHHTTSSSCCEEEEEEC
T ss_pred ecccEEEEeECCCCCEEEEEecCC-C-cc--ceEEEECC--eeeeec----ccchHHHHHHhhhhhhcCCCCCeEEEEcC
Confidence 346789999999999999998621 1 12 68899998 688764 235668887754322 245789999999
Q ss_pred cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCc-cccccCCCCcEEEEEcccccc-c--cCCCeeEEEEcCCCCCC
Q 035593 87 GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFAL-EKLEKSYPDRLFVYVGNALKA-S--LKDGFSGILVDLFSKGS 162 (269)
Q Consensus 87 G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~-~~~~~~~~~rv~~~~~D~~~~-~--~~~~yD~I~~d~~~~~~ 162 (269)
|+|.+++.++++.+..+|++||+|+.+++.|++++.. .. ...+++++++.+|+.++ . ..++||+|++|.+.+..
T Consensus 105 G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~ 182 (304)
T 3bwc_A 105 GDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR--SLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAG 182 (304)
T ss_dssp TTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC----
T ss_pred CCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccc
Confidence 9999999999865678999999999999999998731 10 01257999999999987 3 47799999999877644
Q ss_pred CCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH-hcCceEEEE--cCC--CCce-EE
Q 035593 163 LLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV-FGKKLYVLS--LGN--RKDD-SL 236 (269)
Q Consensus 163 ~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~~v~~~~--~~~--~~n~-v~ 236 (269)
....+++.+|++.++++|+|||+++++..++.. . ......+.+.++++ |+ .+..+. ++. .+++ .+
T Consensus 183 ~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~~GF~-~v~~~~~~vP~yp~g~w~f~ 253 (304)
T 3bwc_A 183 PASKLFGEAFYKDVLRILKPDGICCNQGESIWL-------D-LELIEKMSRFIRETGFA-SVQYALMHVPTYPCGSIGTL 253 (304)
T ss_dssp -----CCHHHHHHHHHHEEEEEEEEEEECCTTT-------C-HHHHHHHHHHHHHHTCS-EEEEEECCCTTSTTSCCEEE
T ss_pred cchhhhHHHHHHHHHHhcCCCcEEEEecCCccc-------c-hHHHHHHHHHHHhCCCC-cEEEEEeecccccCcceEEE
Confidence 445677899999999999999999999765432 1 33577889999999 96 454443 332 2343 56
Q ss_pred EEecCC
Q 035593 237 IALTGE 242 (269)
Q Consensus 237 ~~~~~~ 242 (269)
+|++++
T Consensus 254 ~as~~~ 259 (304)
T 3bwc_A 254 VCSKKA 259 (304)
T ss_dssp EEESSS
T ss_pred EEeCCc
Confidence 677663
No 14
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.93 E-value=8.1e-25 Score=195.11 Aligned_cols=212 Identities=20% Similarity=0.266 Sum_probs=158.5
Q ss_pred CCCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEc
Q 035593 8 ADDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILG 85 (269)
Q Consensus 8 ~~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG 85 (269)
....++|++.+|+||+|.|++++. + +|.|++|+ .+|+.. ..++.|++.+...+. ..++++|||||
T Consensus 58 ~~~~~~l~~~~s~~q~i~v~~~~~-----~--g~~l~ldg--~~~~~~----~de~~y~e~l~~~~l~~~~~~~~VLdiG 124 (321)
T 2pt6_A 58 LKIKKILYETKSKYQNVLVFESTT-----Y--GKVLVLDG--VIQLTE----KDEFAYHEMMTHVPMTVSKEPKNVLVVG 124 (321)
T ss_dssp EEEEEEEEEEECSSCEEEEEEESS-----S--CEEEEETT--EEEEET----TTHHHHHHHHHHHHHHHSSSCCEEEEEE
T ss_pred EecccEEEEEECCCceEEEEEcCC-----C--cEEEEECC--EeeeCc----ccchHHHHHHHHHHHhcCCCCCEEEEEc
Confidence 344678999999999999999863 2 58888988 567643 235678887654322 23578999999
Q ss_pred CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCCCC
Q 035593 86 FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKGSL 163 (269)
Q Consensus 86 ~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~~~ 163 (269)
||+|.+++.++++.+..+|++||+||++++.|++++.... ....+++++++++|+.++ ...++||+|++|.+++...
T Consensus 125 ~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~ 203 (321)
T 2pt6_A 125 GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS-CGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGP 203 (321)
T ss_dssp CTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS-GGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSG
T ss_pred CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc-cccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCCCc
Confidence 9999999999986667899999999999999999985310 001257899999999987 3467899999998765333
Q ss_pred CCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceE--EEEcCCC--Cce-EEEE
Q 035593 164 LSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLY--VLSLGNR--KDD-SLIA 238 (269)
Q Consensus 164 ~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~--~~~~~~~--~n~-v~~~ 238 (269)
...+++.++++.++++|+|||+++++..++.. + ...+..+.++++++|+ .+. ...++.. +++ .++|
T Consensus 204 ~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~~F~-~v~~~~~~vp~~~~g~w~f~~a 274 (321)
T 2pt6_A 204 AETLFNQNFYEKIYNALKPNGYCVAQCESLWI-------H-VGTIKNMIGYAKKLFK-KVEYANISIPTYPCGCIGILCC 274 (321)
T ss_dssp GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTT-------C-HHHHHHHHHHHHTTCS-EEEEEEEECTTSGGGEEEEEEE
T ss_pred chhhhHHHHHHHHHHhcCCCcEEEEEcCCccc-------C-HHHHHHHHHHHHHHCC-CeEEEEEEeccccCceEEEEEe
Confidence 34566799999999999999999998865532 1 3457889999999997 443 3344443 454 3566
Q ss_pred ecCC
Q 035593 239 LTGE 242 (269)
Q Consensus 239 ~~~~ 242 (269)
++..
T Consensus 275 s~~~ 278 (321)
T 2pt6_A 275 SKTD 278 (321)
T ss_dssp ESST
T ss_pred eCCC
Confidence 6553
No 15
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.93 E-value=6.8e-25 Score=190.25 Aligned_cols=198 Identities=13% Similarity=0.075 Sum_probs=150.9
Q ss_pred CCCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEc
Q 035593 8 ADDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILG 85 (269)
Q Consensus 8 ~~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG 85 (269)
.+..++|++.+|+||+|.|++++. + +|+|++|+ . |+.. ..++.|++.|...+. ...+++||+||
T Consensus 15 ~~~~~vl~~~~s~~q~i~v~~~~~-----~--g~~l~ldg--~-q~~~----~d~~~y~e~l~~~~~~~~~~~~~VL~iG 80 (262)
T 2cmg_A 15 YTIEAKLLDVRSEHNILEIFKSKD-----F--GEIAMLNR--Q-LLFK----NFLHIESELLAHMGGCTKKELKEVLIVD 80 (262)
T ss_dssp EECSEEEEEEECSSCEEEEEEETT-----T--EEEEEETT--E-EEEG----GGTHHHHHHHHHHHHTTSSCCCEEEEES
T ss_pred EEEeeEEEeeECCCceEEEEECCC-----c--cEEEEEcC--c-cccc----chHHHHHHHHHHHhhhcCCCCCEEEEEe
Confidence 345689999999999999999864 2 68999998 5 7764 245678887754432 22478999999
Q ss_pred CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEcCCCCCCCCC
Q 035593 86 FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVDLFSKGSLLS 165 (269)
Q Consensus 86 ~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d~~~~~~~~~ 165 (269)
||+|.+++.++++ + .+|++||+||++++.|++++.... ....++|++++.+|++++. ++||+|++|+.++
T Consensus 81 ~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~-~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~~dp----- 150 (262)
T 2cmg_A 81 GFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFH-EVKNNKNFTHAKQLLDLDI--KKYDLIFCLQEPD----- 150 (262)
T ss_dssp SCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHH-HHHTCTTEEEESSGGGSCC--CCEEEEEESSCCC-----
T ss_pred CCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhc-cccCCCeEEEEechHHHHH--hhCCEEEECCCCh-----
Confidence 9999999999987 7 899999999999999999875310 0113579999999999876 7899999986432
Q ss_pred CCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEE--cC-CCCceEEEEecCC
Q 035593 166 ELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLS--LG-NRKDDSLIALTGE 242 (269)
Q Consensus 166 ~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~--~~-~~~n~v~~~~~~~ 242 (269)
..|++.++++|+|||+++++..++.. + ...+..+.++++++|+ .+..+. ++ .+.+.+++|++..
T Consensus 151 ----~~~~~~~~~~L~pgG~lv~~~~~~~~-------~-~~~~~~~~~~l~~~F~-~~~~~~~~vP~~g~~~~~~as~~~ 217 (262)
T 2cmg_A 151 ----IHRIDGLKRMLKEDGVFISVAKHPLL-------E-HVSMQNALKNMGGVFS-VAMPFVAPLRILSNKGYIYASFKT 217 (262)
T ss_dssp ----HHHHHHHHTTEEEEEEEEEEEECTTT-------C-HHHHHHHHHHHHTTCS-EEEEECCTTCTTCCEEEEEEESSC
T ss_pred ----HHHHHHHHHhcCCCcEEEEEcCCccc-------C-HHHHHHHHHHHHHhCC-ceEEEEEccCCCcccEEEEeeCCC
Confidence 35999999999999999998765432 1 3357788999999997 454442 22 2233456787663
No 16
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.92 E-value=4.5e-24 Score=191.14 Aligned_cols=211 Identities=18% Similarity=0.278 Sum_probs=156.8
Q ss_pred CCccEEEEEecCCCeEEEEEeecCCCCcccceEEEEecCCCceeeeeecCCcccchHHHHHhcCCC--CCCCCcEEEEcC
Q 035593 9 DDVKIIAKFRSRYNYIRVLEVSRKVDHPFAGARLLLLDGPGNIHSISYLFRSLTNTYFDAFATLPP--ILPPGPIGILGF 86 (269)
Q Consensus 9 ~~~~~i~~~~s~y~~i~V~e~~~~~~~~~~~~r~L~~~~~~~~qs~~~~~~~l~~~y~~~~~~~~~--l~~~~~VL~iG~ 86 (269)
+-.++|++.+|+||+|.|.++.. + +|.|.+|+ .+|+.. ..++.|++.+..++. ..++++||||||
T Consensus 63 ~v~~vl~~~~s~~q~I~v~~~~~-----~--g~~l~ldg--~~~~~~----~de~~y~e~L~~l~l~~~~~~~~VLdIG~ 129 (334)
T 1xj5_A 63 KVEKVLFQGKSDYQDVIVFQSAT-----Y--GKVLVLDG--VIQLTE----RDECAYQEMITHLPLCSIPNPKKVLVIGG 129 (334)
T ss_dssp EEEEEEEEEECSSCEEEEEEESS-----S--CEEEEETT--EEEEET----TTHHHHHHHHHHHHHTTSSCCCEEEEETC
T ss_pred EeeeEEEEeecCCeEEEEEEcCC-----C--CeEEEECC--EeecCc----CcchHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 34578999999999999999864 2 68899998 577642 346778887764432 345789999999
Q ss_pred cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c--cCCCeeEEEEcCCCCCCC
Q 035593 87 GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S--LKDGFSGILVDLFSKGSL 163 (269)
Q Consensus 87 G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~--~~~~yD~I~~d~~~~~~~ 163 (269)
|+|.+++.++++.+..+|++||+|+.+++.|++++..... ...+++++++++|+.++ . ..++||+|++|++.+...
T Consensus 130 G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~-gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~ 208 (334)
T 1xj5_A 130 GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAI-GYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGP 208 (334)
T ss_dssp SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG-GGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSG
T ss_pred CccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcc-ccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCc
Confidence 9999999999876678999999999999999998742100 01257899999999987 2 357899999998765433
Q ss_pred CCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCce--EEEEcCCCC--c-eEEEE
Q 035593 164 LSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKL--YVLSLGNRK--D-DSLIA 238 (269)
Q Consensus 164 ~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v--~~~~~~~~~--n-~v~~~ 238 (269)
...+...++++.++++|+|||+++++..+... +......++++++++|+..+ ++..++... . ..++|
T Consensus 209 ~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--------~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~a 280 (334)
T 1xj5_A 209 AKELFEKPFFQSVARALRPGGVVCTQAESLWL--------HMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLC 280 (334)
T ss_dssp GGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT--------CHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEE
T ss_pred chhhhHHHHHHHHHHhcCCCcEEEEecCCccc--------cHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEc
Confidence 34566789999999999999999998655432 13356778899999997323 223455442 2 24566
Q ss_pred ecC
Q 035593 239 LTG 241 (269)
Q Consensus 239 ~~~ 241 (269)
++.
T Consensus 281 s~~ 283 (334)
T 1xj5_A 281 STE 283 (334)
T ss_dssp ECS
T ss_pred ccC
Confidence 654
No 17
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.73 E-value=7.8e-18 Score=147.33 Aligned_cols=150 Identities=12% Similarity=0.137 Sum_probs=106.8
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGI 153 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I 153 (269)
.+.++.+|||||||+|.++..++.+.++++|++||+||++++.|++++.... -.+++++++|+.++. .+.||+|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~g-----l~~v~~v~gDa~~l~-d~~FDvV 192 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLG-----VDGVNVITGDETVID-GLEFDVL 192 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHT-----CCSEEEEESCGGGGG-GCCCSEE
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcC-----CCCeEEEECchhhCC-CCCcCEE
Confidence 4668999999999998776555555689999999999999999999874322 258999999999874 6789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEEcCCCCc
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLSLGNRKD 233 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~~~~n 233 (269)
+++...+ ...++++++++.|||||++++......+. .+...+.....+.|...+...+..+-.|
T Consensus 193 ~~~a~~~-------d~~~~l~el~r~LkPGG~Lvv~~~~~~r~---------~l~~~v~~~~~~gf~~~~~~~p~~~v~N 256 (298)
T 3fpf_A 193 MVAALAE-------PKRRVFRNIHRYVDTETRIIYRTYTGMRA---------ILYAPVSDDDITGFRRAGVVLPSGKVNN 256 (298)
T ss_dssp EECTTCS-------CHHHHHHHHHHHCCTTCEEEEEECCGGGG---------GSSCCCCTGGGTTEEEEEEECCCTTCCC
T ss_pred EECCCcc-------CHHHHHHHHHHHcCCCcEEEEEcCcchhh---------hccccCChhhhhhhhheeEECCCCCcCc
Confidence 9865311 24689999999999999999987544221 0011111224456752222334444589
Q ss_pred eEEEEecCCCCC
Q 035593 234 DSLIALTGELPD 245 (269)
Q Consensus 234 ~v~~~~~~~~~~ 245 (269)
.|+++.+...|.
T Consensus 257 ~vv~a~k~~~~~ 268 (298)
T 3fpf_A 257 TSVLVFKCPDKG 268 (298)
T ss_dssp EEEEEEECC---
T ss_pred EEEEEEccCCch
Confidence 999998888763
No 18
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.63 E-value=2.4e-16 Score=134.16 Aligned_cols=120 Identities=18% Similarity=0.151 Sum_probs=92.0
Q ss_pred cchHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccc
Q 035593 62 TNTYFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNA 141 (269)
Q Consensus 62 ~~~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~ 141 (269)
+.+|.+.++.. ...++.+|||||||+|..+.+++++. ..++++||++|.+++.|++++... ..+++++.+|+
T Consensus 46 e~~~m~~~a~~-~~~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~------~~~~~~~~~~a 117 (236)
T 3orh_A 46 ETPYMHALAAA-ASSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ------THKVIPLKGLW 117 (236)
T ss_dssp GHHHHHHHHHH-HTTTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGC------SSEEEEEESCH
T ss_pred HHHHHHHHHHh-hccCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhC------CCceEEEeehH
Confidence 44566555432 12367899999999999999998854 458999999999999999987533 46799999999
Q ss_pred ccc---ccCCCeeEEEEcCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEE
Q 035593 142 LKA---SLKDGFSGILVDLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 142 ~~~---~~~~~yD~I~~d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
... ...++||.|+.|.+.......+. ....++++++++|||||+|++.
T Consensus 118 ~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 118 EDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred HhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 876 45678999999976543222232 2357899999999999999873
No 19
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.61 E-value=1.9e-14 Score=119.07 Aligned_cols=107 Identities=13% Similarity=0.079 Sum_probs=89.7
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.++.+|||||||+|.++..+++..|..+|+++|+++++++.|++++.... -++++++.+|+.+. ...++||+
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~D~ 111 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV-----ARNVTLVEAFAPEGLDDLPDPDR 111 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT-----CTTEEEEECCTTTTCTTSCCCSE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEeCChhhhhhcCCCCCE
Confidence 4557889999999999999999998888999999999999999999874322 25799999999776 44478999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|+++.... ...++++.+.+.|+|||.+++....
T Consensus 112 i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 112 VFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp EEESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred EEECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99875332 2578999999999999999998754
No 20
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.61 E-value=2.7e-13 Score=114.93 Aligned_cols=148 Identities=22% Similarity=0.335 Sum_probs=106.9
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCC
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKD 148 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~ 148 (269)
.+.|..+|||||||+|..+..+++.. |+.+|++||++|+|++.+++.+.. .+++..+.+|+... ....
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-------~~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-------RRNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-------CTTEEEEESCTTCGGGGTTTCC
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-------hcCeeEEEEeccCccccccccc
Confidence 46789999999999999999999864 788999999999999999988642 35799999999875 3457
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH-hcCceEEEE
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV-FGKKLYVLS 227 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~~v~~~~ 227 (269)
.+|+|++|...+. ....++.++++.|||||.+++.+..... .........+.+..+.|++. |. -+-.+.
T Consensus 147 ~vDvVf~d~~~~~------~~~~~l~~~~r~LKpGG~lvI~ik~r~~---d~~~p~~~~~~~ev~~L~~~GF~-l~e~i~ 216 (233)
T 4df3_A 147 GVDGLYADVAQPE------QAAIVVRNARFFLRDGGYMLMAIKARSI---DVTTEPSEVYKREIKTLMDGGLE-IKDVVH 216 (233)
T ss_dssp CEEEEEECCCCTT------HHHHHHHHHHHHEEEEEEEEEEEECCHH---HHHTCCCHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred eEEEEEEeccCCh------hHHHHHHHHHHhccCCCEEEEEEecccC---CCCCChHHHHHHHHHHHHHCCCE-EEEEEc
Confidence 8999998765332 2467999999999999999987543321 11111234566677777765 63 344444
Q ss_pred cCC--CCceEEEE
Q 035593 228 LGN--RKDDSLIA 238 (269)
Q Consensus 228 ~~~--~~n~v~~~ 238 (269)
... ....++++
T Consensus 217 L~pf~~~H~lv~~ 229 (233)
T 4df3_A 217 LDPFDRDHAMIYA 229 (233)
T ss_dssp CTTTSTTEEEEEE
T ss_pred cCCCCCceEEEEE
Confidence 433 23444444
No 21
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.61 E-value=2.3e-15 Score=126.99 Aligned_cols=100 Identities=15% Similarity=0.216 Sum_probs=84.3
Q ss_pred CcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCC-CcEEEEEcccccc--cc-CCCeeEE
Q 035593 79 GPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYP-DRLFVYVGNALKA--SL-KDGFSGI 153 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~-~rv~~~~~D~~~~--~~-~~~yD~I 153 (269)
.+|||||||+|..+..+++..+ +.+|++||+|+++++.|++++...+ .. ++++++++|+.++ .. .++||+|
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG----YSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT----CCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 3999999999999999999875 7899999999999999999885322 12 5899999999887 22 5799999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
++|.... ...++++.+.+.|+|||+++++
T Consensus 134 ~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 134 FGQVSPM-------DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp EECCCTT-------THHHHHHHHHHHEEEEEEEEET
T ss_pred EEcCcHH-------HHHHHHHHHHHHcCCCcEEEEe
Confidence 9986432 1467999999999999999985
No 22
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.60 E-value=5e-15 Score=128.02 Aligned_cols=109 Identities=19% Similarity=0.242 Sum_probs=84.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~ 152 (269)
+.|..+|||||||+|..+..+++++ ++++|++||+++.|++.|++++.... ...+++++++|+.++.. +.||+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~----~~~~v~~~~~D~~~~~~-~~~d~ 142 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK----APTPVDVIEGDIRDIAI-ENASM 142 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC----CSSCEEEEESCTTTCCC-CSEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc----cCceEEEeecccccccc-ccccc
Confidence 5578899999999999999999875 47899999999999999999864221 14589999999988733 46999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
|++...-+ ..++ .....+++++++.|||||+|++.-
T Consensus 143 v~~~~~l~-~~~~-~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 143 VVLNFTLQ-FLEP-SERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEESCGG-GSCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeeeeee-ecCc-hhHhHHHHHHHHHcCCCcEEEEEe
Confidence 98753211 1111 112468999999999999998854
No 23
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.60 E-value=3.5e-15 Score=126.45 Aligned_cols=103 Identities=16% Similarity=0.220 Sum_probs=86.9
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccccc---CCCeeEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASL---KDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~---~~~yD~I 153 (269)
++.+|||||||+|..+..+++..|+.+|+++|+++.+++.|++++.... ..++++++.+|+.+... .++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH----FENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT----CTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEECCHHHHHHhhccCCccEE
Confidence 5789999999999999999997788999999999999999999874322 13589999999988732 6789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
++|.... ...++++.+.+.|+|||+++++-
T Consensus 147 ~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 147 FIDAAKA-------QSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEETTSS-------SHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEcCcHH-------HHHHHHHHHHHhcCCCeEEEEee
Confidence 9986432 14789999999999999998843
No 24
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=1.4e-14 Score=124.94 Aligned_cols=133 Identities=17% Similarity=0.165 Sum_probs=98.9
Q ss_pred cCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCc---cccccCCCCcEEEEEcccccc-c-
Q 035593 71 TLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFAL---EKLEKSYPDRLFVYVGNALKA-S- 145 (269)
Q Consensus 71 ~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~---~~~~~~~~~rv~~~~~D~~~~-~- 145 (269)
.+....++.+|||||||+|.++..++++.|+.+|++||+++.+++.|++++.. .++ ..+++++++|+.++ .
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l----~~~v~~~~~D~~~~~~~ 105 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF----SARIEVLEADVTLRAKA 105 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT----GGGEEEEECCTTCCHHH
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC----cceEEEEeCCHHHHhhh
Confidence 33344567899999999999999999998889999999999999999999865 432 24799999999887 2
Q ss_pred ------cCCCeeEEEEcCCCCCC-----------C---CCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchh
Q 035593 146 ------LKDGFSGILVDLFSKGS-----------L---LSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGK 205 (269)
Q Consensus 146 ------~~~~yD~I~~d~~~~~~-----------~---~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~ 205 (269)
..++||+|+++..-... . .......++++.+.+.|+|||.+++.....
T Consensus 106 ~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------ 173 (260)
T 2ozv_A 106 RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ------------ 173 (260)
T ss_dssp HHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG------------
T ss_pred hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH------------
Confidence 35789999998422110 0 001224689999999999999998855221
Q ss_pred HHHHHHHHHHHHHhc
Q 035593 206 VVMEATLKAMHKVFG 220 (269)
Q Consensus 206 ~~~~~~~~~l~~~F~ 220 (269)
....++..+++.|.
T Consensus 174 -~~~~~~~~l~~~~~ 187 (260)
T 2ozv_A 174 -SVAEIIAACGSRFG 187 (260)
T ss_dssp -GHHHHHHHHTTTEE
T ss_pred -HHHHHHHHHHhcCC
Confidence 24456666766675
No 25
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.59 E-value=3.3e-14 Score=118.67 Aligned_cols=110 Identities=11% Similarity=0.076 Sum_probs=88.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc---cCCCeeEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS---LKDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~---~~~~yD~I 153 (269)
+..+|||||||+|.++..+++..|+.++++||+++.+++.|++++.... -++++++.+|+.++. ..++||+|
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG-----VPNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-----CSSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 4678999999999999999999999999999999999999999874322 257999999998762 45689999
Q ss_pred EEcCCCCCCC----CCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 154 LVDLFSKGSL----LSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~~----~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+++...+... ...+...++++.+.+.|+|||++++...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 9985443211 0113457899999999999999998763
No 26
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.59 E-value=2.7e-14 Score=119.50 Aligned_cols=110 Identities=16% Similarity=0.075 Sum_probs=88.6
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---ccCCCeeEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---SLKDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---~~~~~yD~I 153 (269)
+..+|||||||+|.++..+++.+|+.++++||+++.+++.|++++.... -++++++.+|+.++ ...+.||.|
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~-----~~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE-----AQNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC-----CSSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 4678999999999999999998899999999999999999998864222 24799999999876 346789999
Q ss_pred EEcCCCCCCCC----CCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 154 LVDLFSKGSLL----SELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~~~----~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
++...++.... ..+...++++.+++.|+|||.+++...
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 98654432111 123457899999999999999998763
No 27
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=7.1e-15 Score=125.91 Aligned_cols=105 Identities=23% Similarity=0.216 Sum_probs=86.7
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--cc--CCCe
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SL--KDGF 150 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~--~~~y 150 (269)
.++.+|||||||+|..+..+++.+| +.+|+++|+++.+++.|++++.... ..++++++.+|+.++ .. .++|
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g----~~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG----VDQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHhcCCCCCe
Confidence 3678999999999999999999887 7899999999999999999874322 135899999999875 22 3489
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|+|++|.... ....+++.+.+.|+|||++++.-.
T Consensus 138 D~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 138 DLIFIDADKP-------NNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp SEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEeCC
Confidence 9999986322 146899999999999999998643
No 28
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.58 E-value=2e-14 Score=120.92 Aligned_cols=110 Identities=15% Similarity=0.090 Sum_probs=89.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCCCeeE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKDGFSG 152 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~~yD~ 152 (269)
+..+|||||||+|.++..+++..|+.+|++||+++.+++.|+++..... -.+++++.+|+.++ ...++||.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~-----l~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG-----LSNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT-----CSSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC-----CCcEEEEECCHHHHHHHHcCCCChhe
Confidence 4678999999999999999999999999999999999999998864322 24699999999885 35779999
Q ss_pred EEEcCCCCCCCC----CCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 153 ILVDLFSKGSLL----SELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 153 I~~d~~~~~~~~----~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|++...++.... ..+...++++.+++.|||||++.+...
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 998654432111 123456899999999999999998774
No 29
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.58 E-value=5.4e-15 Score=124.00 Aligned_cols=105 Identities=19% Similarity=0.136 Sum_probs=86.4
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----c-CC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----L-KD 148 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~-~~ 148 (269)
.++.+|||||||+|..+..+++.+| +.+|+++|+++.+++.|++++.... ...+++++.+|+.+. . . .+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN----LNDRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHHHHHTTCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHHhcCCC
Confidence 3678999999999999999999887 7899999999999999999874322 135799999999875 1 1 26
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+||+|++|.... ....+++.+.+.|+|||++++.-.
T Consensus 133 ~fD~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 133 PFDFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CCSEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CcCEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 799999986422 146899999999999999998643
No 30
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.57 E-value=5.1e-14 Score=114.50 Aligned_cols=152 Identities=16% Similarity=0.123 Sum_probs=107.8
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
..+.+.......++.+|||+|||+|.++..+++. +.+++++|+++.+++.|++++..... .+.+++++.+|+.+.
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNL---DNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTC---TTSCEEEEECSTTTT
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECchhcc
Confidence 3344443323457889999999999999999885 78999999999999999998743221 112599999999887
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceE
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLY 224 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~ 224 (269)
...++||+|+++..-.. ..-....+++.+.+.|+|||.+++...... ....+.+.+++.|. .+.
T Consensus 115 ~~~~~~D~v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~------------~~~~~~~~l~~~~~-~~~ 178 (194)
T 1dus_A 115 VKDRKYNKIITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ------------GAKSLAKYMKDVFG-NVE 178 (194)
T ss_dssp CTTSCEEEEEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEEESTH------------HHHHHHHHHHHHHS-CCE
T ss_pred cccCCceEEEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEECCCC------------ChHHHHHHHHHHhc-ceE
Confidence 55678999998642210 001135899999999999999999886542 24457777888885 455
Q ss_pred EEEcCCCCceEEEE
Q 035593 225 VLSLGNRKDDSLIA 238 (269)
Q Consensus 225 ~~~~~~~~n~v~~~ 238 (269)
.+.... ...++.+
T Consensus 179 ~~~~~~-~~~~~~~ 191 (194)
T 1dus_A 179 TVTIKG-GYRVLKS 191 (194)
T ss_dssp EEEEET-TEEEEEE
T ss_pred EEecCC-cEEEEEE
Confidence 554322 3344444
No 31
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.57 E-value=2.2e-14 Score=116.72 Aligned_cols=113 Identities=10% Similarity=0.118 Sum_probs=84.4
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCee
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFS 151 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD 151 (269)
.+.+..+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++.... -++++++.+|...+ ..+++||
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~~~~~l~~~~~~~fD 91 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG-----IENTELILDGHENLDHYVREPIR 91 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT-----CCCEEEEESCGGGGGGTCCSCEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEeCcHHHHHhhccCCcC
Confidence 3557889999999999999999985 7899999999999999999875322 25799999888775 3467899
Q ss_pred EEEEcC-CCCCCCCCC----CCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 152 GILVDL-FSKGSLLSE----LEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 152 ~I~~d~-~~~~~~~~~----l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+|+++. +-+...... -....+++.+.+.|||||.+++.++..
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp EEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred EEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 999874 211100000 112478899999999999999988754
No 32
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.57 E-value=8.2e-15 Score=125.61 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=86.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c-c------C
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S-L------K 147 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~-~------~ 147 (269)
++++|||||||+|..+..+++..| +.+|+++|+++.+++.|++++.... ..++++++.+|+.++ . . .
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g----~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG----VDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT----CGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCeEEEECCHHHHHHHHHhccCCC
Confidence 578999999999999999999887 7899999999999999999874322 135899999999876 2 1 5
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
++||+|++|.... ....+++.+.+.|+|||++++.-
T Consensus 155 ~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 155 GSYDFIFVDADKD-------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TCBSEEEECSCST-------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCEEEEEEcCchH-------HHHHHHHHHHHhCCCCeEEEEec
Confidence 7899999986422 24789999999999999998853
No 33
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.56 E-value=3.3e-14 Score=119.22 Aligned_cols=104 Identities=18% Similarity=0.196 Sum_probs=85.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccC-----C
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLK-----D 148 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~-----~ 148 (269)
++.+|||||||+|..+..+++.+| +.+|+++|+++.+++.|++++.... ...+++++++|+.+. ... +
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG----LSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC----CCCceEEEeCCHHHHHHHhhhccCCC
Confidence 678999999999999999999877 7899999999999999999874322 135799999999776 111 7
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+||+|++|.... ....+++.+.+.|+|||++++.-.
T Consensus 140 ~fD~v~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 140 QYDLIYIDADKA-------NTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp CEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CccEEEECCCHH-------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 899999876421 146899999999999999998643
No 34
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.56 E-value=1.3e-13 Score=115.98 Aligned_cols=151 Identities=11% Similarity=0.049 Sum_probs=103.0
Q ss_pred CCCCCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCe
Q 035593 74 PILPPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGF 150 (269)
Q Consensus 74 ~l~~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~y 150 (269)
.+.++.+|||+||| +|.++..+++.. +.+|+++|+|+.+++.|++++.... .+++++.+|+..+ ...++|
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~f 124 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN------SNVRLVKSNGGIIKGVVEGTF 124 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT------CCCEEEECSSCSSTTTCCSCE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC------CCcEEEeCCchhhhhcccCce
Confidence 35578999999999 999999999865 7899999999999999999875432 2799999998655 335789
Q ss_pred eEEEEcCCCCCCCC---------------CCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHH
Q 035593 151 SGILVDLFSKGSLL---------------SELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAM 215 (269)
Q Consensus 151 D~I~~d~~~~~~~~---------------~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (269)
|+|+++..-..... ......++++.+.+.|+|||.+++.+... ......+.+.+
T Consensus 125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~~~~~~~~l 193 (230)
T 3evz_A 125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-----------EKLLNVIKERG 193 (230)
T ss_dssp EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-----------HHHHHHHHHHH
T ss_pred eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-----------HhHHHHHHHHH
Confidence 99998743211000 00002689999999999999999976432 12345566666
Q ss_pred HHHhcCceEEEEcCCCC-ceEEEEecCCC
Q 035593 216 HKVFGKKLYVLSLGNRK-DDSLIALTGEL 243 (269)
Q Consensus 216 ~~~F~~~v~~~~~~~~~-n~v~~~~~~~~ 243 (269)
++.. -.+..+....+. -..++.+.++.
T Consensus 194 ~~~g-~~~~~~~~~~g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 194 IKLG-YSVKDIKFKVGTRWRHSLIFFKGI 221 (230)
T ss_dssp HHTT-CEEEEEEECCCC-CEEEEEEECCC
T ss_pred HHcC-CceEEEEecCCCeEEEEEEEeccc
Confidence 6652 134444433222 23355555543
No 35
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.56 E-value=4.8e-14 Score=118.83 Aligned_cols=107 Identities=17% Similarity=0.230 Sum_probs=88.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
..++.+|||||||+|..+..+++.+|+.+++++|+++.+++.|++++.. .++++++.+|+.+....++||+|+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~~~fD~v~ 114 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG-------NLKVKYIEADYSKYDFEEKYDMVV 114 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS-------CTTEEEEESCTTTCCCCSCEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc-------CCCEEEEeCchhccCCCCCceEEE
Confidence 4568899999999999999999998899999999999999999998753 238999999999884448999999
Q ss_pred EcCCCCCCCCCCCCcH---HHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELEDP---NTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~---e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+... ..++... ++++++++.|+|||.+++.....
T Consensus 115 ~~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 115 SALS-----IHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EESC-----GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EeCc-----cccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 8532 2223222 59999999999999999876443
No 36
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.56 E-value=4e-14 Score=120.89 Aligned_cols=110 Identities=19% Similarity=0.217 Sum_probs=89.2
Q ss_pred CCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCe
Q 035593 72 LPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGF 150 (269)
Q Consensus 72 ~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~y 150 (269)
++.+.++.+|||||||+|..+..+++..+. +|+++|+++.+++.|++++.... ...+++++++|+.++ ...++|
T Consensus 41 l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~f 115 (257)
T 3f4k_A 41 INELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKAN----CADRVKGITGSMDNLPFQNEEL 115 (257)
T ss_dssp SCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTSCSSCTTCE
T ss_pred HhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECChhhCCCCCCCE
Confidence 334567889999999999999999998764 99999999999999999864322 135799999999877 456899
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|+|++...- .++...++++.+++.|+|||.+++...
T Consensus 116 D~v~~~~~l-----~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 116 DLIWSEGAI-----YNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp EEEEEESCS-----CCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEEecChH-----hhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 999986322 223467899999999999999998763
No 37
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.56 E-value=1.2e-14 Score=124.15 Aligned_cols=104 Identities=18% Similarity=0.200 Sum_probs=86.6
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c-c-----C
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S-L-----K 147 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~-~-----~ 147 (269)
.++++|||||||+|..+..+++..+ +.+|+++|+++++++.|++++...+ ..++++++.+|+.+. . . .
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK----QEHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT----CTTTEEEEESCHHHHHHHHHHHHCS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHhhccCC
Confidence 3678999999999999999999776 7899999999999999999874322 135899999999876 2 1 5
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
++||+|++|.... ....+++.+.+.|+|||++++.-
T Consensus 135 ~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 135 HQFDFIFIDADKT-------NYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp SCEEEEEEESCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCEeEEEEcCChH-------HhHHHHHHHHHhcCCCeEEEEEC
Confidence 7999999986422 14689999999999999999853
No 38
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.55 E-value=2.9e-14 Score=122.83 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=89.6
Q ss_pred CCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCe
Q 035593 72 LPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGF 150 (269)
Q Consensus 72 ~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~y 150 (269)
++.+.++.+|||||||+|.++..+++. +..+|+++|+++.+++.|++++.... ..++++++.+|+.++ ...++|
T Consensus 41 l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~f 115 (267)
T 3kkz_A 41 IDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG----LQNRVTGIVGSMDDLPFRNEEL 115 (267)
T ss_dssp CCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCCCTTCE
T ss_pred cccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC----CCcCcEEEEcChhhCCCCCCCE
Confidence 333567899999999999999999986 77899999999999999999874322 135799999999887 456799
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|+|++... ..++...++++.+++.|+|||.+++...
T Consensus 116 D~i~~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 116 DLIWSEGA-----IYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp EEEEESSC-----GGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEEEcCC-----ceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99997532 2233457999999999999999988754
No 39
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.55 E-value=6e-14 Score=113.00 Aligned_cols=106 Identities=20% Similarity=0.130 Sum_probs=85.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-cc-CCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SL-KDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~-~~~yD~ 152 (269)
+.++.+|||||||+|.++..+++.+|+.+|+++|+++.+++.|++++.... ...++ ++.+|+.+. .. .++||+
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~-~~~~d~~~~~~~~~~~~D~ 97 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG----VSDRI-AVQQGAPRAFDDVPDNPDV 97 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT----CTTSE-EEECCTTGGGGGCCSCCSE
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC----CCCCE-EEecchHhhhhccCCCCCE
Confidence 456789999999999999999998888999999999999999999874322 12378 888998665 22 278999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
|+++.... ..++++.+.+.|+|||.+++.....
T Consensus 98 i~~~~~~~--------~~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 98 IFIGGGLT--------APGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp EEECC-TT--------CTTHHHHHHHTCCTTCEEEEEECSH
T ss_pred EEECCccc--------HHHHHHHHHHhcCCCCEEEEEeecc
Confidence 99754321 1679999999999999999987643
No 40
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.55 E-value=9.7e-15 Score=124.26 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=86.6
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--cc------
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SL------ 146 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~------ 146 (269)
.++++|||||||+|..+.++++..| +.+|+++|+++.+++.|++++...+ ..++++++.+|+.++ ..
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG----VEHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEESCHHHHHHHHHHSTTC
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHHhccCC
Confidence 3678999999999999999999887 7899999999999999999874322 135799999999876 11
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.++||+|++|.... ...++++.+.+.|+|||++++.-
T Consensus 145 ~~~fD~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 145 EGSYDFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEec
Confidence 57899999985422 14789999999999999999853
No 41
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.55 E-value=1.2e-14 Score=121.05 Aligned_cols=101 Identities=20% Similarity=0.283 Sum_probs=84.2
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I 153 (269)
++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|++++..... .++++++.+|+.++ ...+ ||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~-fD~v 130 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL----IDRVELQVGDPLGIAAGQRD-IDIL 130 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG----GGGEEEEESCHHHHHTTCCS-EEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC----CceEEEEEecHHHHhccCCC-CCEE
Confidence 578999999999999999999777 78999999999999999988743221 25799999999876 3345 9999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
++|.... ....+++.+.+.|+|||++++.
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 131 FMDCDVF-------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEETTTS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCChh-------hhHHHHHHHHHhcCCCeEEEEE
Confidence 9985321 2578999999999999999984
No 42
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.55 E-value=3.4e-14 Score=120.81 Aligned_cols=103 Identities=12% Similarity=0.013 Sum_probs=85.5
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc-c---CCCee
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS-L---KDGFS 151 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~-~---~~~yD 151 (269)
.++.+|||||||+|..+..++...++.+|++||+++.+++.|++++.... -++++++++|+.++. . .++||
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~fD 143 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ-----LENTTFCHDRAETFGQRKDVRESYD 143 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-----CSSEEEEESCHHHHTTCTTTTTCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCEEEEeccHHHhcccccccCCcc
Confidence 35789999999999999999987788999999999999999998864322 236999999998873 2 57899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+|++.... ....+++.+.+.|+|||.+++...
T Consensus 144 ~V~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 144 IVTARAVA--------RLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp EEEEECCS--------CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred EEEEeccC--------CHHHHHHHHHHhcCCCCEEEEEeC
Confidence 99987632 147899999999999999988643
No 43
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.55 E-value=1.2e-13 Score=114.95 Aligned_cols=104 Identities=15% Similarity=0.035 Sum_probs=84.9
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.+..+|||||||+|.++..+++. +.+|+++|+++++++.|++++.... ...+++++.+|+.+. ...+.||+
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g----~~~~v~~~~~d~~~~~~~~~~~D~ 125 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYG----LSPRMRAVQGTAPAALADLPLPEA 125 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCTTGGGTTSCCCSE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC----CCCCEEEEeCchhhhcccCCCCCE
Confidence 3456789999999999999999985 7899999999999999998864222 123799999999985 44568999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|+++... ... +++.+.+.|+|||.+++....
T Consensus 126 v~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 126 VFIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp EEECSCC--------CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred EEECCcc--------cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 9986411 234 999999999999999998864
No 44
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.55 E-value=2.3e-14 Score=123.62 Aligned_cols=100 Identities=17% Similarity=0.156 Sum_probs=82.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILV 155 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~ 155 (269)
...+|||||||+|..+..|+++ ..+|++||+|+.|++.|++ .++++++++|+.+. ..+++||+|++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~-----------~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR-----------HPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC-----------CTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh-----------cCCceeehhhhhhhcccCCcccEEEE
Confidence 3578999999999999999884 5699999999999988754 25799999999988 66789999997
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
... ..++....++++++++|||||+|++..++..
T Consensus 106 ~~~-----~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 106 AQA-----MHWFDLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CSC-----CTTCCHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred eee-----hhHhhHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 422 2334467899999999999999998776553
No 45
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.54 E-value=9.1e-14 Score=116.05 Aligned_cols=111 Identities=17% Similarity=0.217 Sum_probs=85.6
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++....+.....++++++.+|+... ...++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 467899999999999999999877778999999999999999998753321000013799999999665 4567999999
Q ss_pred EcCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+.. ...++.. ..+++++++.|+|||++++...
T Consensus 108 ~~~-----~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 108 VIE-----VIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EES-----CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EHH-----HHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 742 2223332 4899999999999997776543
No 46
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.54 E-value=6e-15 Score=122.12 Aligned_cols=150 Identities=11% Similarity=-0.006 Sum_probs=86.0
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccccc-----CCCe
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASL-----KDGF 150 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~-----~~~y 150 (269)
.++.+|||+|||+|.++..+++..++.+++++|+++.+++.|++++.... .+++++++|+.+... .++|
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~f 102 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG------AVVDWAAADGIEWLIERAERGRPW 102 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------------CCHHHHHHHHHHHHHTTCCB
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC------CceEEEEcchHhhhhhhhhccCcc
Confidence 57889999999999999999999888999999999999999999876432 278999999987633 3899
Q ss_pred eEEEEcCCCCCCC-----CCCCC-----------------cHHHHHHHHhhccCCcE-EEEEecCCCccccccccchhHH
Q 035593 151 SGILVDLFSKGSL-----LSELE-----------------DPNTWEKLRQCLRKGGR-IMVNVGGSCVEAEDSRRDGKVV 207 (269)
Q Consensus 151 D~I~~d~~~~~~~-----~~~l~-----------------~~e~~~~~~~~L~pgG~-l~~~~~~~~~~~~~~~~~~~~~ 207 (269)
|+|+++..-.... ..... ...+++.+++.|+|||+ +++.+... . ...
T Consensus 103 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~---------~~~ 172 (215)
T 4dzr_A 103 HAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN-Q---------ADE 172 (215)
T ss_dssp SEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS-C---------HHH
T ss_pred cEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc-c---------HHH
Confidence 9999974321100 00000 06788999999999999 55554322 1 222
Q ss_pred HHHHHHHHHHHhcCceEEEEcCCCCceEEEEecCC
Q 035593 208 MEATLKAMHKVFGKKLYVLSLGNRKDDSLIALTGE 242 (269)
Q Consensus 208 ~~~~~~~l~~~F~~~v~~~~~~~~~n~v~~~~~~~ 242 (269)
+...+..++.-|. .+...+.......++++....
T Consensus 173 ~~~~l~~~~~gf~-~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 173 VARLFAPWRERGF-RVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp HHHHTGGGGGGTE-ECCEEECTTSCEEEEEEEECC
T ss_pred HHHHHHHhhcCCc-eEEEEEecCCCEEEEEEEEcC
Confidence 3233332234464 444444444444556666443
No 47
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.54 E-value=7.5e-14 Score=119.35 Aligned_cols=127 Identities=18% Similarity=0.261 Sum_probs=99.5
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHH-CCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDL-YPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~-~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~ 152 (269)
.+.++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|++++.... ...+++++.+|+.+....++||+
T Consensus 90 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~D~ 165 (255)
T 3mb5_A 90 GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG----FDDRVTIKLKDIYEGIEEENVDH 165 (255)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT----CTTTEEEECSCGGGCCCCCSEEE
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC----CCCceEEEECchhhccCCCCcCE
Confidence 3457889999999999999999998 678999999999999999999874322 13469999999998755678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH---hcCceEEE
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV---FGKKLYVL 226 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---F~~~v~~~ 226 (269)
|++|... ..++++.+.+.|+|||.+++..... .....+.+.+++. |. .+..+
T Consensus 166 v~~~~~~---------~~~~l~~~~~~L~~gG~l~~~~~~~------------~~~~~~~~~l~~~g~~f~-~~~~~ 220 (255)
T 3mb5_A 166 VILDLPQ---------PERVVEHAAKALKPGGFFVAYTPCS------------NQVMRLHEKLREFKDYFM-KPRTI 220 (255)
T ss_dssp EEECSSC---------GGGGHHHHHHHEEEEEEEEEEESSH------------HHHHHHHHHHHHTGGGBS-CCEEE
T ss_pred EEECCCC---------HHHHHHHHHHHcCCCCEEEEEECCH------------HHHHHHHHHHHHcCCCcc-ccEEE
Confidence 9997542 2578999999999999999977432 2345566667665 64 34443
No 48
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.52 E-value=1.1e-13 Score=113.64 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=89.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCee
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFS 151 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD 151 (269)
+.+..+|||+|||+|.++..+++.+ |..+|+++|+++.+++.|++++.... ..++++++.+|+.++ ..+++||
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~fD 95 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN----LIDRVTLIKDGHQNMDKYIDCPVK 95 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT----CGGGEEEECSCGGGGGGTCCSCEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCeEEEECCHHHHhhhccCCce
Confidence 4577899999999999999999875 56799999999999999999875322 125799999999887 4557899
Q ss_pred EEEEcCCC-CCCCCCCC----CcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 152 GILVDLFS-KGSLLSEL----EDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 152 ~I~~d~~~-~~~~~~~l----~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+|+++..- +....... ...++++.+.+.|+|||.+++..+..
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 99988532 10000011 12479999999999999999987654
No 49
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.52 E-value=5.9e-14 Score=117.16 Aligned_cols=111 Identities=16% Similarity=0.111 Sum_probs=85.3
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++..........++++++.+|+... ...++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 467899999999999999999877778999999999999999998753221000013799999998655 4557999999
Q ss_pred EcCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+... ..++.. .++++.+++.|+|||++++...
T Consensus 108 ~~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEV-----IEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EESC-----GGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eHHH-----HHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 7532 222222 5899999999999998877543
No 50
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=2e-13 Score=123.94 Aligned_cols=134 Identities=21% Similarity=0.256 Sum_probs=98.2
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||+|||+|.++..+++.+|+.+|++||+|+.+++.|++++..+... ...+++++.+|+.+....++||+|++
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~--~~~~v~~~~~D~~~~~~~~~fD~Ii~ 298 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE--ALDRCEFMINNALSGVEPFRFNAVLC 298 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG--GGGGEEEEECSTTTTCCTTCEEEEEE
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC--cCceEEEEechhhccCCCCCeeEEEE
Confidence 3468999999999999999999999999999999999999999987533210 12368999999988756679999999
Q ss_pred cCCCCCCC-CCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEE
Q 035593 156 DLFSKGSL-LSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLS 227 (269)
Q Consensus 156 d~~~~~~~-~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~ 227 (269)
+..-+... ...-...++++.+++.|+|||.+++...... .....+++.|+ .+..+.
T Consensus 299 nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~---------------~~~~~l~~~fg-~~~~~a 355 (375)
T 4dcm_A 299 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---------------DYFHKLKKIFG-NCTTIA 355 (375)
T ss_dssp CCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS---------------CHHHHHHHHHS-CCEEEE
T ss_pred CCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc---------------CHHHHHHHhcC-CEEEEe
Confidence 75432110 1111124799999999999999998664331 11355788897 455443
No 51
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.52 E-value=1e-13 Score=119.82 Aligned_cols=116 Identities=20% Similarity=0.257 Sum_probs=92.4
Q ss_pred HHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c
Q 035593 67 DAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S 145 (269)
Q Consensus 67 ~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~ 145 (269)
+.+.....+.++.+|||||||+|.++..+++..|+.+|+++|+++.+++.|++++.... .++++++.+|+.+. .
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~ 101 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG-----IKNVKFLQANIFSLPF 101 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCGGGCCS
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEcccccCCC
Confidence 33334445567899999999999999999999889999999999999999999874322 24799999999987 5
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
..++||+|++...-.. . -....+++.+++.|+|||.+++...
T Consensus 102 ~~~~fD~v~~~~~l~~-~---~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 102 EDSSFDHIFVCFVLEH-L---QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp CTTCEEEEEEESCGGG-C---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeeEEEEechhhh-c---CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 5689999997532211 1 1236899999999999999998653
No 52
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.51 E-value=8.7e-14 Score=119.39 Aligned_cols=103 Identities=16% Similarity=0.070 Sum_probs=86.2
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccccc----CCCee
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASL----KDGFS 151 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~----~~~yD 151 (269)
.++.+|||||||+|..+..++..+|+.+|++||+++.+++.|+++..... -.+++++++|+.++.. .++||
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----l~~v~~~~~d~~~~~~~~~~~~~fD 153 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG-----LKGARALWGRAEVLAREAGHREAYA 153 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-----CSSEEEEECCHHHHTTSTTTTTCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-----CCceEEEECcHHHhhcccccCCCce
Confidence 35789999999999999999998899999999999999999998864322 2359999999988732 47899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+|++.+... ...+++.+.+.|+|||.+++...
T Consensus 154 ~I~s~a~~~--------~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 154 RAVARAVAP--------LCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEEEESSCC--------HHHHHHHHGGGEEEEEEEEEEEC
T ss_pred EEEECCcCC--------HHHHHHHHHHHcCCCeEEEEEeC
Confidence 999875432 36899999999999999987654
No 53
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=1e-12 Score=110.92 Aligned_cols=102 Identities=21% Similarity=0.282 Sum_probs=83.9
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc----cccCCCe
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK----ASLKDGF 150 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~----~~~~~~y 150 (269)
+.+..+|||||||+|.++..+++..+..+|++||+++.+++.|+++... .++++++.+|+.. ....++|
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~~~ 144 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-------RENIIPILGDANKPQEYANIVEKV 144 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT-------CTTEEEEECCTTCGGGGTTTSCCE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc-------CCCeEEEECCCCCcccccccCccE
Confidence 4567899999999999999999987778999999999999999988642 2579999999987 4223789
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|+|+.+...+. ....+++.+.+.|+|||.+++.
T Consensus 145 D~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVAQPN------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEecCChh------HHHHHHHHHHHhCCCCcEEEEE
Confidence 99997643211 1367899999999999999886
No 54
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.51 E-value=1.6e-13 Score=116.71 Aligned_cols=115 Identities=16% Similarity=0.168 Sum_probs=86.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCc-cccccCCCCcEEEEEcccccc----ccCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFAL-EKLEKSYPDRLFVYVGNALKA----SLKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~-~~~~~~~~~rv~~~~~D~~~~----~~~~~yD 151 (269)
+..+|||||||+|.++..+++.+|+.+|++||+++.+++.|++++.. .........+++++.+|+.+. ...+.||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 46789999999999999999988999999999999999999876421 000000135799999999874 2467899
Q ss_pred EEEEcCCCCCCCC----CCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 152 GILVDLFSKGSLL----SELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 152 ~I~~d~~~~~~~~----~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
.|++...++.... ..+....+++.+.+.|+|||.|++...
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 9998654432111 123346899999999999999998764
No 55
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.51 E-value=2e-13 Score=114.68 Aligned_cols=104 Identities=19% Similarity=0.194 Sum_probs=85.4
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--c--cC---
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--S--LK--- 147 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~--~~--- 147 (269)
.++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|++++.... ...+++++.+|+.+. . ..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE----AEHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT----CTTTEEEEESCHHHHHHHHHHTTCT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC----CCCeEEEEEcCHHHHHHHHHhcCCC
Confidence 3678999999999999999998776 7899999999999999999874322 135899999999775 1 11
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
++||+|++|.... ...++++.+.+.|+|||++++.-
T Consensus 144 ~~~D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 144 GTFDVAVVDADKE-------NCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp TCEEEEEECSCST-------THHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEEC
Confidence 7899999986422 24689999999999999998853
No 56
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.51 E-value=1.8e-13 Score=120.15 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=90.0
Q ss_pred HhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCC
Q 035593 69 FATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKD 148 (269)
Q Consensus 69 ~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~ 148 (269)
+.....+.+..+|||||||+|.++..+++.++ .+|+++|+++.+++.|++++...+ ...+++++.+|+.++ .+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~--~~ 136 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD----SPRRKEVRIQGWEEF--DE 136 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC----CSSCEEEEECCGGGC--CC
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECCHHHc--CC
Confidence 33333456788999999999999999999765 899999999999999999874322 134899999999887 78
Q ss_pred CeeEEEEcCCCCCCCCC------CCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 149 GFSGILVDLFSKGSLLS------ELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~------~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+||+|++...-. ..+. .-....+++++++.|+|||.+++..+..
T Consensus 137 ~fD~v~~~~~~~-~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 137 PVDRIVSLGAFE-HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp CCSEEEEESCGG-GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred CccEEEEcchHH-hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 999999753211 1111 0112689999999999999999987644
No 57
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.51 E-value=1.8e-13 Score=113.98 Aligned_cols=110 Identities=12% Similarity=0.030 Sum_probs=88.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
+.++.+|||||||+|.++..+++.. |..+|+++|+++.+++.|++++.... .++++++.+|+.+. ...++||+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~ 109 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-----LKNVEVLKSEENKIPLPDNTVDF 109 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEECBTTBCSSCSSCEEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEecccccCCCCCCCeeE
Confidence 4567899999999999999999886 67899999999999999999874322 24799999999887 55678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
|++...-.. . -....+++++++.|+|||.+++..+..
T Consensus 110 v~~~~~l~~-~---~~~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 110 IFMAFTFHE-L---SEPLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp EEEESCGGG-C---SSHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EEeehhhhh-c---CCHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 997532211 1 124689999999999999999876543
No 58
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.51 E-value=5.2e-14 Score=118.90 Aligned_cols=104 Identities=22% Similarity=0.265 Sum_probs=87.2
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--cc--CCCee
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SL--KDGFS 151 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~--~~~yD 151 (269)
.++.+|||||||+|..+..+++.+|+.+|+++|+++.+++.|++++.... ...+++++.+|+.+. .. .++||
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG----LESRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT----CTTTEEEECSCGGGSHHHHTTSCCEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEECCHHHHHHhcccCCCcc
Confidence 36789999999999999999998888999999999999999999874322 135799999999886 22 57899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+|+++.... ...++++.+.+.|+|||++++..
T Consensus 129 ~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 129 VLFIDAAKG-------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEGGGS-------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred EEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 999976432 24789999999999999999863
No 59
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.51 E-value=1.1e-13 Score=118.01 Aligned_cols=117 Identities=14% Similarity=0.043 Sum_probs=90.3
Q ss_pred hHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc
Q 035593 64 TYFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK 143 (269)
Q Consensus 64 ~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~ 143 (269)
...+.+.....+.++.+|||||||+|.++..+++.+ +.+|+++|+++.+++.|++++.... ..++++++.+|+.+
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~----~~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG----VSERVHFIHNDAAG 97 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEESCCTT
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEECChHh
Confidence 344445433345678899999999999999999876 6799999999999999998864221 13579999999988
Q ss_pred cccCCCeeEEEEcCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEEe
Q 035593 144 ASLKDGFSGILVDLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 144 ~~~~~~yD~I~~d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
....++||+|++.... .++ ....+++++++.|||||.+++..
T Consensus 98 ~~~~~~fD~V~~~~~~-----~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 98 YVANEKCDVAACVGAT-----WIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CCCSSCEEEEEEESCG-----GGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCcCCCCCEEEECCCh-----HhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 7337889999973211 111 24789999999999999998854
No 60
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=4.6e-14 Score=119.59 Aligned_cols=106 Identities=19% Similarity=0.154 Sum_probs=82.4
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---ccCCCeeE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---SLKDGFSG 152 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---~~~~~yD~ 152 (269)
.+..+|||||||+|.++..+++. +..+|+++|+++.+++.|+++.... ..+++++.+|+.+. ..+++||+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQ------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGC------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhc------CCCeEEEecCHHHhhcccCCCceEE
Confidence 46789999999999999999763 4459999999999999999987532 35799999999886 34578999
Q ss_pred EEEcCCCCCCCC-CCCC-cHHHHHHHHhhccCCcEEEEE
Q 035593 153 ILVDLFSKGSLL-SELE-DPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 153 I~~d~~~~~~~~-~~l~-~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|++|.+.. ... .+.. ...+++++++.|||||++++.
T Consensus 132 V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 132 ILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 99975442 111 1111 136799999999999999864
No 61
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.50 E-value=3e-14 Score=118.32 Aligned_cols=110 Identities=7% Similarity=-0.009 Sum_probs=80.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccc-------cCCCCcEEEEEccccccc-c
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLE-------KSYPDRLFVYVGNALKAS-L 146 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~-------~~~~~rv~~~~~D~~~~~-~ 146 (269)
+.++.+|||+|||+|..+..++++ +.+|++||+++.|++.|+++.+..... ....++++++++|+.++. .
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 346789999999999999999985 679999999999999999886531000 001357999999999883 3
Q ss_pred C-CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 147 K-DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 147 ~-~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
. ++||+|++...-. ..+. -....++++++++|||||.+++
T Consensus 98 ~~~~fD~v~~~~~l~-~l~~-~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMI-ALPA-DMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp HHHSEEEEEEESCGG-GSCH-HHHHHHHHHHHHHSCSEEEEEE
T ss_pred cCCCEEEEEECcchh-hCCH-HHHHHHHHHHHHHcCCCcEEEE
Confidence 2 6899999632111 1111 1124689999999999998333
No 62
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.50 E-value=1e-13 Score=119.25 Aligned_cols=115 Identities=17% Similarity=0.122 Sum_probs=87.5
Q ss_pred cCCCCC-CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc---c
Q 035593 71 TLPPIL-PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS---L 146 (269)
Q Consensus 71 ~~~~l~-~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~---~ 146 (269)
.+..+. ++.+|||+|||+|.++..++++.+. +|++||+++.+++.|++++...++ ..+++++.+|+.++. .
T Consensus 42 ~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~----~~~v~~~~~D~~~~~~~~~ 116 (259)
T 3lpm_A 42 KFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQL----EDQIEIIEYDLKKITDLIP 116 (259)
T ss_dssp HHCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTC----TTTEEEECSCGGGGGGTSC
T ss_pred HHhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCC----cccEEEEECcHHHhhhhhc
Confidence 333455 7889999999999999999986544 999999999999999998754432 357999999999873 3
Q ss_pred CCCeeEEEEcCCCCCC----CC-C--------C---CCcHHHHHHHHhhccCCcEEEEEe
Q 035593 147 KDGFSGILVDLFSKGS----LL-S--------E---LEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~----~~-~--------~---l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.++||+|+++.+-... .. + + ....++++.+.+.|+|||.+++..
T Consensus 117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 6799999997432110 00 0 0 112479999999999999999854
No 63
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.50 E-value=1.3e-13 Score=120.05 Aligned_cols=118 Identities=23% Similarity=0.325 Sum_probs=93.5
Q ss_pred HHHHHh-cCCCCCCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccc
Q 035593 65 YFDAFA-TLPPILPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNAL 142 (269)
Q Consensus 65 y~~~~~-~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~ 142 (269)
+.+.+. .+..+.++.+|||||||+|..+..+++.+| +.+|+++|++|.+++.|++++... ..+++++++|+.
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~~~v~~~~~d~~ 82 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL------PYDSEFLEGDAT 82 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS------SSEEEEEESCTT
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc------CCceEEEEcchh
Confidence 444443 333456789999999999999999999888 589999999999999999987532 248999999999
Q ss_pred ccccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 143 KASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 143 ~~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++...++||+|++...-. .. -...++++++++.|+|||.+++....
T Consensus 83 ~~~~~~~fD~v~~~~~l~-~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 83 EIELNDKYDIAICHAFLL-HM---TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp TCCCSSCEEEEEEESCGG-GC---SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCcCCCeeEEEECChhh-cC---CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 884467999999864321 11 12368999999999999999987654
No 64
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.50 E-value=7.9e-14 Score=114.06 Aligned_cols=109 Identities=15% Similarity=-0.018 Sum_probs=85.8
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---ccCCCeeE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---SLKDGFSG 152 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---~~~~~yD~ 152 (269)
.++.+|||+|||+|.++..+++ .+..+|+++|+|+.+++.|++++.... -++++++++|+.++ ...++||+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALS-RGAASVLFVESDQRSAAVIARNIEALG-----LSGATLRRGAVAAVVAAGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHT-----CSCEEEEESCHHHHHHHCCSSCCSE
T ss_pred CCCCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcC-----CCceEEEEccHHHHHhhccCCCccE
Confidence 3678999999999999998877 356689999999999999999875332 25799999999987 23679999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHh--hccCCcEEEEEecCC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQ--CLRKGGRIMVNVGGS 193 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~--~L~pgG~l~~~~~~~ 193 (269)
|++|..-.. . .-...++++.+.+ .|+|||++++.....
T Consensus 117 i~~~~p~~~--~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 117 VLADPPYNV--D-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp EEECCCTTS--C-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred EEECCCCCc--c-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 999743211 0 0113578999998 999999999987544
No 65
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.50 E-value=7e-14 Score=115.64 Aligned_cols=103 Identities=14% Similarity=0.068 Sum_probs=86.1
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
++.+|||+|||+|..+..+++.+|+.+++++|+++.+++.|++++.... -++++++.+|+.++...++||+|++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK-----LENIEPVQSRVEEFPSEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-----CSSEEEEECCTTTSCCCSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCeEEEecchhhCCccCCcCEEEEe
Confidence 5789999999999999999998889999999999999999998864322 23599999999887555789999975
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
... ....+++.+++.|+|||.+++....
T Consensus 140 ~~~--------~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 140 AFA--------SLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp CSS--------SHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred ccC--------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 431 1468999999999999999987643
No 66
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.50 E-value=2.1e-14 Score=120.54 Aligned_cols=106 Identities=22% Similarity=0.308 Sum_probs=82.6
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccC-----C
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLK-----D 148 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~-----~ 148 (269)
++.+|||||||+|..+..+++..+ +.+|++||+++.+++.|++++.... ..++++++.+|+.++ ... +
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG----LQDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC----CCCceEEEECCHHHHHHHHHHhcCCC
Confidence 678999999999999999998765 7899999999999999999874322 134799999999775 222 6
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+||+|++|..... .....++++.+ +.|+|||++++...
T Consensus 134 ~fD~V~~d~~~~~----~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 134 TLDMVFLDHWKDR----YLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp CCSEEEECSCGGG----HHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred ceEEEEEcCCccc----chHHHHHHHhc-cccCCCeEEEEeCC
Confidence 8999999864321 11123567777 99999999998544
No 67
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=1.8e-13 Score=118.88 Aligned_cols=126 Identities=13% Similarity=0.037 Sum_probs=98.9
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||+|||+|.++..+++..+..+|+++|++|.+++.|++++..+. -.+++++.+|+.++...++||+|+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~-----l~~~~~~~~d~~~~~~~~~~D~Vi 191 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK-----LNNVIPILADNRDVELKDVADRVI 191 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT-----CSSEEEEESCGGGCCCTTCEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCEEEEECChHHcCccCCceEEE
Confidence 557889999999999999999998777899999999999999999875443 246899999999882256899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhc
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFG 220 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~ 220 (269)
+|... ...+++..+.+.|+|||++++.++.... .......+.++.+.+.++
T Consensus 192 ~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~~~~~-------~~~~~~~~~~~~~~~~~~ 242 (272)
T 3a27_A 192 MGYVH--------KTHKFLDKTFEFLKDRGVIHYHETVAEK-------IMYERPIERLKFYAEKNG 242 (272)
T ss_dssp ECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEEEGG-------GTTTHHHHHHHHHHHHTT
T ss_pred ECCcc--------cHHHHHHHHHHHcCCCCEEEEEEcCccc-------cccccHHHHHHHHHHHhC
Confidence 98542 2467999999999999999988865421 001234566677777654
No 68
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.49 E-value=2.4e-13 Score=115.15 Aligned_cols=104 Identities=20% Similarity=0.306 Sum_probs=85.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----cC--C
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----LK--D 148 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~~--~ 148 (269)
++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|++++.... ..++++++.+|+.+. . .. +
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG----VAEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 578999999999999999999776 7899999999999999999874322 124799999998765 1 12 7
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+||+|++|.... ...++++.+.+.|+|||++++.-.
T Consensus 148 ~fD~V~~d~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 148 EFDLIFIDADKR-------NYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp CEEEEEECSCGG-------GHHHHHHHHHHTEEEEEEEEEECT
T ss_pred CcCEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 899999986421 146899999999999999998643
No 69
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.49 E-value=1.3e-11 Score=103.61 Aligned_cols=103 Identities=23% Similarity=0.321 Sum_probs=83.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKDG 149 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~~ 149 (269)
+.+..+|||+|||+|.++..+++.. ++.+|+++|+++.+++.+++.... .++++++.+|+.+. ...++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-------RRNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-------CTTEEEEECCTTCGGGGTTTCCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-------cCCCEEEEccCCCcchhhcccCC
Confidence 4567899999999999999999875 568999999999999999988753 25799999999873 23468
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
||+|++|..... ....+++.+.+.|+|||.+++..
T Consensus 144 ~D~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 144 VDVIFEDVAQPT------QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCCCHh------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 999998754211 12356999999999999998873
No 70
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.49 E-value=3e-13 Score=115.32 Aligned_cols=105 Identities=13% Similarity=0.089 Sum_probs=85.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
..++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++.+. ..+++++.+|+.++ ...++||+|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT--------SPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC--------CTTEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc--------cCCeEEEEcchhhCCCCCCCeEEE
Confidence 34688999999999999999998533 399999999999999999875 25799999999887 456899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++...-. .. -...++++++++.|+|||.+++....
T Consensus 113 ~~~~~l~-~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 113 LSSLALH-YI---ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEESCGG-GC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEchhhh-hh---hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9753211 01 12478999999999999999997644
No 71
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.49 E-value=7.6e-13 Score=114.82 Aligned_cols=111 Identities=19% Similarity=0.192 Sum_probs=87.0
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||+|||+|.++..+++.+|+.+|+++|+++.+++.|++++.... -++++++.+|+.+....++||+|++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~-----~~~v~~~~~d~~~~~~~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA-----IKNIHILQSDWFSALAGQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT-----CCSEEEECCSTTGGGTTCCEEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEEcchhhhcccCCccEEEE
Confidence 46789999999999999999988899999999999999999999874322 2479999999987644678999999
Q ss_pred cCCCCCC-----------CCCC--C--------CcHHHHHHHHhhccCCcEEEEEec
Q 035593 156 DLFSKGS-----------LLSE--L--------EDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 156 d~~~~~~-----------~~~~--l--------~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+.+-... ..+. + ....+++.+.+.|+|||.+++...
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 7432111 0010 1 125788999999999999998753
No 72
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.4e-13 Score=120.59 Aligned_cols=107 Identities=17% Similarity=0.056 Sum_probs=87.1
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccC------
Q 035593 76 LPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLK------ 147 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~------ 147 (269)
.++.+|||||||+|..+..+++.+ ++.+|+++|+++.+++.|++++.... ...++++++++|+.++ ...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP---DTYKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC----CCTTEEEEECCTTCCGGGCTTTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc---CCCCceEEEEcCHHhCCccccccccC
Confidence 368899999999999999999876 78999999999999999999864320 0146899999999987 334
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
++||+|++... ..++....+++++++.|+|||.+++..
T Consensus 112 ~~fD~V~~~~~-----l~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 112 QKIDMITAVEC-----AHWFDFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp SCEEEEEEESC-----GGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEeHhhH-----HHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence 79999998532 222345799999999999999998844
No 73
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=2.7e-13 Score=115.77 Aligned_cols=111 Identities=16% Similarity=0.153 Sum_probs=89.6
Q ss_pred HHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccC
Q 035593 68 AFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLK 147 (269)
Q Consensus 68 ~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~ 147 (269)
.++......++.+|||||||+|.++..+++.+|+.+++++|+++.+++.|++.. ++++++.+|+.++...
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~ 93 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----------PNTNFGKADLATWKPA 93 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTTCCCS
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhhcCcc
Confidence 343333345788999999999999999999888899999999999999999872 3689999999887656
Q ss_pred CCeeEEEEcCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 148 DGFSGILVDLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++||+|++...-+ ++ ....+++++++.|+|||.+++..+..
T Consensus 94 ~~fD~v~~~~~l~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 94 QKADLLYANAVFQ-----WVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp SCEEEEEEESCGG-----GSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CCcCEEEEeCchh-----hCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 7899999853211 11 24689999999999999999987543
No 74
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.49 E-value=1.4e-13 Score=118.28 Aligned_cols=109 Identities=13% Similarity=0.004 Sum_probs=81.1
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccc-------ccc-----CCCCcEEEEEccccc
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEK-------LEK-----SYPDRLFVYVGNALK 143 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~-------~~~-----~~~~rv~~~~~D~~~ 143 (269)
.++.+|||+|||+|..+.+|++. +.+|++||+++.+++.|++..+... ... ....+++++++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 36789999999999999999984 7799999999999999987764210 000 013689999999998
Q ss_pred ccc--CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 144 ASL--KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 144 ~~~--~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
+.. .++||+|+....-. ..++ -....+++.+++.|||||++++
T Consensus 145 l~~~~~~~FD~V~~~~~l~-~l~~-~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALV-AINP-GDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp GGGGCCCCEEEEEESSSTT-TSCG-GGHHHHHHHHHHTEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhh-hCCH-HHHHHHHHHHHHHcCCCeEEEE
Confidence 833 37999999642211 1221 1235799999999999999864
No 75
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.49 E-value=5.6e-14 Score=122.39 Aligned_cols=106 Identities=18% Similarity=0.086 Sum_probs=88.2
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||+|||+|.++..+++..+. +|+++|+||.+++.|++++..+.. ..+++++++|+.++...++||+|+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~----~~~v~~~~~D~~~~~~~~~fD~Vi 197 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFPGENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCCCCSCEEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC----CceEEEEECCHHHhcccCCccEEE
Confidence 456889999999999999999987544 899999999999999998754431 346999999999985578999999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+|.... ..++++.+.+.|+|||++++...++
T Consensus 198 ~~~p~~--------~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 198 MGYVVR--------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCchh--------HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 975421 3689999999999999999876653
No 76
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.49 E-value=2.2e-13 Score=116.55 Aligned_cols=109 Identities=16% Similarity=0.192 Sum_probs=87.3
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.++.+|||||||+|.++..+++.+ +.+|+++|+++.+++.|++++.. .++++++.+|+.+. ...++||+
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~ 123 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG-------NNKIIFEANDILTKEFPENNFDL 123 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS-------CTTEEEEECCTTTCCCCTTCEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc-------CCCeEEEECccccCCCCCCcEEE
Confidence 34567899999999999999999876 78999999999999999998752 15899999999987 45789999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|++...-. ..+ .-....+++++++.|+|||.+++....
T Consensus 124 v~~~~~l~-~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 124 IYSRDAIL-ALS-LENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp EEEESCGG-GSC-HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeHHHHHH-hcC-hHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99752211 010 012468999999999999999987643
No 77
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.48 E-value=1.2e-12 Score=109.77 Aligned_cols=111 Identities=16% Similarity=0.190 Sum_probs=86.8
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++...........+++++.+|+... ...++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 46789999999999999999985 77999999999999999998753321111134799999999887 4578999999
Q ss_pred EcCCCCCCCCCCCCc-H---HHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELED-P---NTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~-~---e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+... ..++.. . .+++.+++.|+|||.+++..+..
T Consensus 107 ~~~~-----l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 107 MQAF-----LTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp EESC-----GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred Ecch-----hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 7532 112222 3 79999999999999999876544
No 78
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.48 E-value=1.6e-13 Score=114.29 Aligned_cols=103 Identities=17% Similarity=0.099 Sum_probs=84.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
..++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++.. .++++++.+|+.++...++||+|+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~~~fD~v~ 119 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKR-------WSHISWAATDILQFSTAELFDLIV 119 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTT-------CSSEEEEECCTTTCCCSCCEEEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhccc-------CCCeEEEEcchhhCCCCCCccEEE
Confidence 446789999999999999999885 46999999999999999998753 247999999999886678999999
Q ss_pred EcCCCCCCCCCCCCc----HHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELED----PNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~----~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+... ..++.. ..+++.+++.|+|||.+++...
T Consensus 120 ~~~~-----l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 120 VAEV-----LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EESC-----GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EccH-----HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 8522 223322 4779999999999999998653
No 79
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.48 E-value=1.3e-11 Score=104.59 Aligned_cols=147 Identities=14% Similarity=0.250 Sum_probs=93.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKDG 149 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~~ 149 (269)
+.|..+|||+|||+|..+..+++.. +..+|+++|+++.+++...+.... ..++.++.+|++.. ...++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-------r~nv~~i~~Da~~~~~~~~~~~~ 146 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-------RPNIFPLLADARFPQSYKSVVEN 146 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-------CTTEEEEECCTTCGGGTTTTCCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-------cCCeEEEEcccccchhhhccccc
Confidence 5678999999999999999998864 578999999999886443332210 24699999999864 22468
Q ss_pred eeEEEEcCCCCCCCCCCCCcHH-HHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH-hcCceEEEE
Q 035593 150 FSGILVDLFSKGSLLSELEDPN-TWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV-FGKKLYVLS 227 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e-~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~~v~~~~ 227 (269)
||+|++|+..+ ...+ +.+.+.+.|||||.|++.+-..+.+ ...+.........+.|++. |. -+..+.
T Consensus 147 ~D~I~~d~a~~-------~~~~il~~~~~~~LkpGG~lvisik~~~~d---~t~~~~e~~~~~~~~L~~~gf~-~~~~~~ 215 (232)
T 3id6_C 147 VDVLYVDIAQP-------DQTDIAIYNAKFFLKVNGDMLLVIKARSID---VTKDPKEIYKTEVEKLENSNFE-TIQIIN 215 (232)
T ss_dssp EEEEEECCCCT-------THHHHHHHHHHHHEEEEEEEEEEEC----------CCSSSSTTHHHHHHHHTTEE-EEEEEE
T ss_pred eEEEEecCCCh-------hHHHHHHHHHHHhCCCCeEEEEEEccCCcc---cCCCHHHHHHHHHHHHHHCCCE-EEEEec
Confidence 99999986432 1233 4456666999999999876443310 0111122344566667664 63 344444
Q ss_pred cCCC--CceEEEEe
Q 035593 228 LGNR--KDDSLIAL 239 (269)
Q Consensus 228 ~~~~--~n~v~~~~ 239 (269)
.... ...++++.
T Consensus 216 l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 216 LDPYDKDHAIVLSK 229 (232)
T ss_dssp CTTTCSSCEEEEEE
T ss_pred cCCCcCceEEEEEE
Confidence 4322 34445543
No 80
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.48 E-value=4.5e-13 Score=111.06 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=84.7
Q ss_pred CCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEEc
Q 035593 78 PGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILVD 156 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~d 156 (269)
+.+|||||||+|.++..+++. ++.+++++|+++.+++.|++++.... ..++++++.+|+.+. ...++||+|++.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 118 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN----LNDRIQIVQGDVHNIPIEDNYADLIVSR 118 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECBTTBCSSCTTCEEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc----ccCceEEEEcCHHHCCCCcccccEEEEC
Confidence 349999999999999999997 78899999999999999999874322 135899999999987 556799999985
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
..-.. . -....+++++++.|+|||.+++..
T Consensus 119 ~~l~~-~---~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 119 GSVFF-W---EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp SCGGG-C---SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chHhh-c---cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 32111 1 124689999999999999998864
No 81
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.48 E-value=9.6e-14 Score=121.63 Aligned_cols=114 Identities=17% Similarity=0.231 Sum_probs=84.4
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccc----------------------------
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLE---------------------------- 127 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~---------------------------- 127 (269)
.++++|||||||+|.++..+++.++..+|++||+|+.+++.|++++......
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 3678999999999999999999988899999999999999999886421100
Q ss_pred -------------------------cCCCCcEEEEEccccccc------cCCCeeEEEEcCCCCCCCC---CCCCcHHHH
Q 035593 128 -------------------------KSYPDRLFVYVGNALKAS------LKDGFSGILVDLFSKGSLL---SELEDPNTW 173 (269)
Q Consensus 128 -------------------------~~~~~rv~~~~~D~~~~~------~~~~yD~I~~d~~~~~~~~---~~l~~~e~~ 173 (269)
.....+++++++|+.... ..++||+|++...... .. ..-....++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~-ihl~~~~~~~~~~l 203 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKW-VHLNWGDEGLKRMF 203 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHH-HHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHH-hhhcCCHHHHHHHH
Confidence 000148999999987542 5679999997432100 00 000235899
Q ss_pred HHHHhhccCCcEEEEEe
Q 035593 174 EKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 174 ~~~~~~L~pgG~l~~~~ 190 (269)
++++++|+|||+|++..
T Consensus 204 ~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 99999999999999864
No 82
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.48 E-value=5.4e-13 Score=113.20 Aligned_cols=104 Identities=18% Similarity=0.301 Sum_probs=84.7
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c-c------
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S-L------ 146 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~-~------ 146 (269)
.++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|++++.... ...+++++.+|+.+. . .
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG----LENKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEESCHHHHHHHHHHCSSC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCEEEEECCHHHHHHHHHhhccc
Confidence 3678999999999999999999877 7899999999999999999874322 124699999999774 1 1
Q ss_pred ---------C-CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 147 ---------K-DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 147 ---------~-~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
. ++||+|+++.... ...++++.+.+.|+|||++++..
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 7899999874321 13589999999999999999864
No 83
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.48 E-value=1.8e-13 Score=118.72 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=87.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHH-CCCceEEEEECChHHHHHHHHhcCcc-ccccCCCCcEEEEEccccccccCCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDL-YPEAVIHGWELDPSVIKVAREFFALE-KLEKSYPDRLFVYVGNALKASLKDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~-~p~~~v~~vEidp~~~~~a~~~~~~~-~~~~~~~~rv~~~~~D~~~~~~~~~yD~ 152 (269)
+.+..+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|++++... . .++++++.+|+.+....++||+
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-----~~~v~~~~~d~~~~~~~~~fD~ 182 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-----IGNVRTSRSDIADFISDQMYDA 182 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-----CTTEEEECSCTTTCCCSCCEEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCcEEEEECchhccCcCCCccE
Confidence 456789999999999999999987 67889999999999999999987432 1 2579999999988645578999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|+++... ..++++.+.+.|+|||.+++....
T Consensus 183 Vi~~~~~---------~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 183 VIADIPD---------PWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp EEECCSC---------GGGSHHHHHHTEEEEEEEEEEESS
T ss_pred EEEcCcC---------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9986432 257999999999999999998753
No 84
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.47 E-value=3.7e-13 Score=111.61 Aligned_cols=102 Identities=19% Similarity=0.245 Sum_probs=83.2
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++.... -++++++.+|+.+. ...++||+
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~D~ 146 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD-----LHNVSTRHGDGWQGWQARAPFDA 146 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC-----CCceEEEECCcccCCccCCCccE
Confidence 4567889999999999999999986 6899999999999999999875322 24799999999886 55679999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|+++...+ ++. +.+.+.|+|||++++.+..
T Consensus 147 i~~~~~~~-----~~~-----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 147 IIVTAAPP-----EIP-----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEESSBCS-----SCC-----THHHHTEEEEEEEEEEECS
T ss_pred EEEccchh-----hhh-----HHHHHhcccCcEEEEEEcC
Confidence 99875332 111 2588999999999998865
No 85
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.47 E-value=3.9e-13 Score=111.60 Aligned_cols=103 Identities=16% Similarity=0.189 Sum_probs=85.5
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|.++..+++. +.+|+++|+++.+++.|++. + .++++++.+|+.++...++||+|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~-~--------~~~~~~~~~d~~~~~~~~~~D~v~ 112 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH-G--------LDNVEFRQQDLFDWTPDRQWDAVF 112 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG-C--------CTTEEEEECCTTSCCCSSCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc-C--------CCCeEEEecccccCCCCCceeEEE
Confidence 556789999999999999999986 67999999999999999982 2 257999999998886678999999
Q ss_pred EcCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+... ..++.. ..+++++++.|+|||.+++...+.
T Consensus 113 ~~~~-----l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 113 FAHW-----LAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EESC-----GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred Eech-----hhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 7532 223333 689999999999999999987654
No 86
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=4.4e-13 Score=114.45 Aligned_cols=105 Identities=14% Similarity=0.194 Sum_probs=87.9
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHH-CCCceEEEEECChHHHHHHHHhcCcc-ccccCCCCcEEEEEcccccc-ccCCCe
Q 035593 74 PILPPGPIGILGFGAGSAARLILDL-YPEAVIHGWELDPSVIKVAREFFALE-KLEKSYPDRLFVYVGNALKA-SLKDGF 150 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~-~p~~~v~~vEidp~~~~~a~~~~~~~-~~~~~~~~rv~~~~~D~~~~-~~~~~y 150 (269)
.+.+..+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|++++... . .++++++.+|+.+. ...++|
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-----~~~v~~~~~d~~~~~~~~~~~ 167 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-----VENVRFHLGKLEEAELEEAAY 167 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-----CCCEEEEESCGGGCCCCTTCE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CCCEEEEECchhhcCCCCCCc
Confidence 3557889999999999999999987 56889999999999999999986422 1 35799999999887 555789
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|+|+++..+ ..++++.+.+.|+|||.+++....
T Consensus 168 D~v~~~~~~---------~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 168 DGVALDLME---------PWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp EEEEEESSC---------GGGGHHHHHHHEEEEEEEEEEESC
T ss_pred CEEEECCcC---------HHHHHHHHHHhCCCCCEEEEEeCC
Confidence 999997532 247999999999999999998743
No 87
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.47 E-value=2.8e-13 Score=119.57 Aligned_cols=107 Identities=15% Similarity=0.144 Sum_probs=87.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.+..+|||||||+|.++..+++.+ +.+|+++|+++.+++.|++++.... ..++++++.+|+.+. ...++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELR----IDDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC----CCCceEEEECChhcCCCCCCCEeEE
Confidence 5678899999999999999999864 6899999999999999999864322 135899999999987 456899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
++.. ...++...++++++++.|+|||.+++..+
T Consensus 190 ~~~~-----~l~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 190 WNNE-----STMYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp EEES-----CGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECC-----chhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9742 12223368999999999999999988664
No 88
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=2.4e-13 Score=112.01 Aligned_cols=102 Identities=20% Similarity=0.234 Sum_probs=83.5
Q ss_pred CCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEEc
Q 035593 78 PGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILVD 156 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~d 156 (269)
+.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++ ++++++.+|+.++ ...++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH----------PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccccccCCCCeEEEEeh
Confidence 789999999999999999984 679999999999999999874 3689999999887 456899999985
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
..-. ..+ .-....+++++++.|+|||.+++..+..
T Consensus 110 ~~l~-~~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 110 YSLI-HMG-PGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp SSST-TCC-TTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred hhHh-cCC-HHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 3211 111 1134789999999999999999987554
No 89
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.47 E-value=3.7e-13 Score=115.37 Aligned_cols=105 Identities=15% Similarity=0.229 Sum_probs=83.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
..++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++++.... .++++++.+|+.++ ..+++||+|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~l~~~~~~fD~V 107 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG-----HQQVEYVQGDAEQMPFTDERFHIV 107 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCC-CCCSCTTCEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEecHHhCCCCCCCEEEE
Confidence 4478899999999999999998864 499999999999999998864221 24799999999887 456799999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
++...-. ..+ ....+++++++.|+|||.+++..
T Consensus 108 ~~~~~l~-~~~---d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 108 TCRIAAH-HFP---NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEhhhhH-hcC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 9763211 111 23689999999999999998854
No 90
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.47 E-value=4.5e-13 Score=115.46 Aligned_cols=109 Identities=12% Similarity=0.150 Sum_probs=86.8
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.++.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++.... ..++++++.+|+.+. ..+++||+
T Consensus 58 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~fD~ 132 (273)
T 3bus_A 58 DVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG----LANRVTFSYADAMDLPFEDASFDA 132 (273)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCSCTTCEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEECccccCCCCCCCccE
Confidence 35578899999999999999999875 7899999999999999998864221 135799999999887 45679999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|++...-. ..+ ....+++++++.|+|||.+++...
T Consensus 133 v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 133 VWALESLH-HMP---DRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp EEEESCTT-TSS---CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEechhh-hCC---CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 99743211 111 247899999999999999988664
No 91
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.47 E-value=2.5e-13 Score=113.51 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=78.9
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCCCe
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKDGF 150 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~~y 150 (269)
+.++.+|||||||+|..+..+++..++.+|++||++|.+++.+.+.... ..++.++.+|+... ...++|
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-------~~~v~~~~~d~~~~~~~~~~~~~f 127 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-------RNNIIPLLFDASKPWKYSGIVEKV 127 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-------CSSEEEECSCTTCGGGTTTTCCCE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-------CCCeEEEEcCCCCchhhcccccce
Confidence 4567899999999999999999887767999999999877655443321 13688899998763 224789
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
|+|+++...+ .....+++++++.|||||.+++.+
T Consensus 128 D~V~~~~~~~------~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 128 DLIYQDIAQK------NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEECCCST------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeccCh------hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999974221 112346899999999999999875
No 92
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.46 E-value=7.9e-13 Score=112.79 Aligned_cols=115 Identities=18% Similarity=0.164 Sum_probs=86.8
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccc-cC--CCCcEEEEEcccccc----ccCC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLE-KS--YPDRLFVYVGNALKA----SLKD 148 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~-~~--~~~rv~~~~~D~~~~----~~~~ 148 (269)
.+..+|||||||+|.++..+++..|+.+|++||+++.+++.|++++...... .. .-++++++.+|+.++ ....
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 3567899999999999999999888889999999999999998876321000 00 024799999999874 2357
Q ss_pred CeeEEEEcCCCCCCC----CCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 149 GFSGILVDLFSKGSL----LSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~----~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.+|.|++...++..- ...+...++++.+.+.|+|||.|++..
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 899998765443211 112234799999999999999999865
No 93
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.46 E-value=6.3e-14 Score=123.32 Aligned_cols=114 Identities=14% Similarity=0.188 Sum_probs=86.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHH-HHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLIL-DLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~-~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I 153 (269)
+.++.+|||||||+|..+..++ ...|+.+|+++|+++.+++.|++++.... ...+++++.+|+.+....++||+|
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~fD~v 191 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA----LAGQITLHRQDAWKLDTREGYDLL 191 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST----TGGGEEEEECCGGGCCCCSCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECchhcCCccCCeEEE
Confidence 4578899999999999999985 44678999999999999999999875432 134799999999988434899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++...-. ..+......++++++++.|+|||++++..+..
T Consensus 192 ~~~~~~~-~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 192 TSNGLNI-YEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp ECCSSGG-GCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EECChhh-hcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 9743111 01111111248999999999999999977543
No 94
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.46 E-value=7.9e-13 Score=114.90 Aligned_cols=115 Identities=10% Similarity=0.033 Sum_probs=87.2
Q ss_pred HhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCC
Q 035593 69 FATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKD 148 (269)
Q Consensus 69 ~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~ 148 (269)
+.....+.++.+|||||||+|.++..+++.+ +.+|+++|+++.+++.|++++.... ..++++++.+|+.++. +
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~--~ 128 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSE----NLRSKRVLLAGWEQFD--E 128 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCC----CCSCEEEEESCGGGCC--C
T ss_pred HHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC----CCCCeEEEECChhhCC--C
Confidence 3333345678899999999999999999655 4599999999999999999864221 1358999999997764 7
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+||+|++...-. ..+ .-....+++++++.|||||.+++....
T Consensus 129 ~fD~v~~~~~l~-~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 129 PVDRIVSIGAFE-HFG-HERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp CCSEEEEESCGG-GTC-TTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CeeEEEEeCchh-hcC-hHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 899999752111 011 112468999999999999999987654
No 95
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.46 E-value=1.9e-13 Score=115.49 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=86.1
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
++.+|||||||+|..+..+++ ++.+|+++|+++.+++.|++++.... ...+++++.+|+.++...++||+|++.
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~fD~v~~~ 139 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSP----KAEYFSFVKEDVFTWRPTELFDLIFDY 139 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSG----GGGGEEEECCCTTTCCCSSCEEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccC----CCcceEEEECchhcCCCCCCeeEEEEC
Confidence 456999999999999999876 67899999999999999999875321 135799999999988666699999975
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
..-. ..+ .-....+++.+++.|+|||.+++..+..
T Consensus 140 ~~l~-~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 140 VFFC-AIE-PEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp SSTT-TSC-GGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred hhhh-cCC-HHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 3221 111 1124689999999999999999876644
No 96
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.46 E-value=8.1e-14 Score=112.54 Aligned_cols=109 Identities=16% Similarity=0.075 Sum_probs=85.5
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~ 152 (269)
..++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++.... ..++++++.+|+.++ ...++||+
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~fD~ 103 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTK----AENRFTLLKMEAERAIDCLTGRFDL 103 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTT----CGGGEEEECSCHHHHHHHBCSCEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECcHHHhHHhhcCCCCE
Confidence 446789999999999999999885 56799999999999999999875332 124799999999885 34567999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHH--hhccCCcEEEEEecCC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLR--QCLRKGGRIMVNVGGS 193 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~--~~L~pgG~l~~~~~~~ 193 (269)
|+++..-. .....++++.+. +.|+|||++++.....
T Consensus 104 i~~~~~~~-----~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 104 VFLDPPYA-----KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp EEECCSSH-----HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EEECCCCC-----cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 99874211 011357778887 8999999999988654
No 97
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.45 E-value=3.6e-13 Score=113.76 Aligned_cols=102 Identities=17% Similarity=0.233 Sum_probs=83.9
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+. . +++++.+|+.+...+++||+|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~--------~-~v~~~~~d~~~~~~~~~fD~v~~ 109 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK--------D-GITYIHSRFEDAQLPRRYDNIVL 109 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC--------S-CEEEEESCGGGCCCSSCEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh--------C-CeEEEEccHHHcCcCCcccEEEE
Confidence 467899999999999999998854 489999999999999999864 2 69999999988756678999997
Q ss_pred cCCCCCCCCCCC-CcHHHHHHHH-hhccCCcEEEEEecCC
Q 035593 156 DLFSKGSLLSEL-EDPNTWEKLR-QCLRKGGRIMVNVGGS 193 (269)
Q Consensus 156 d~~~~~~~~~~l-~~~e~~~~~~-~~L~pgG~l~~~~~~~ 193 (269)
... ..++ ....++++++ +.|+|||.+++...+.
T Consensus 110 ~~~-----l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 110 THV-----LEHIDDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp ESC-----GGGCSSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred hhH-----HHhhcCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 532 1222 2368999999 9999999999987543
No 98
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.45 E-value=6.6e-13 Score=112.15 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=85.6
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++... .++++++.+|+.+. ...++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE--------GPDLSFIKGDLSSLPFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC--------BTTEEEEECBTTBCSSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc--------cCCceEEEcchhcCCCCCCCccEEE
Confidence 46789999999999999999984 6799999999999999998853 35799999999988 4578999999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+...-. .. -....+++.+++.|+|||.+++...++
T Consensus 122 ~~~~l~-~~---~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 122 AINSLE-WT---EEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp EESCTT-SS---SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EcChHh-hc---cCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 753221 11 123589999999999999999987554
No 99
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.45 E-value=2.3e-13 Score=113.81 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=84.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.++.+|||||||+|.++..+++..+ +++++|+++.+++.|++++... .++++++.+|+.+. ...++||+|
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~~~~~D~v 107 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR------ESNVEFIVGDARKLSFEDKTFDYV 107 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT------TCCCEEEECCTTSCCSCTTCEEEE
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc------CCCceEEECchhcCCCCCCcEEEE
Confidence 34578999999999999999998654 9999999999999999987432 25799999999887 456789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++...-. ........++++.+++.|+|||.+++....
T Consensus 108 ~~~~~~~--~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 108 IFIDSIV--HFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEESCGG--GCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEcCchH--hCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9763200 000011358999999999999999987754
No 100
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.45 E-value=3.5e-13 Score=114.30 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=82.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILV 155 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~ 155 (269)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.... ..+++++.+|+.++ ...++||+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG-----KRVRNYFCCGLQDFTPEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG-----GGEEEEEECCGGGCCCCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC-----CceEEEEEcChhhcCCCCCCEEEEEE
Confidence 57899999999999999988754 5699999999999999999875321 24699999999887 44568999998
Q ss_pred cCCCCCCCCCCCC---cHHHHHHHHhhccCCcEEEEEe
Q 035593 156 DLFSKGSLLSELE---DPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 156 d~~~~~~~~~~l~---~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+.. ..++. ...+++++++.|+|||.+++..
T Consensus 153 ~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 153 QWV-----IGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp ESC-----GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cch-----hhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 632 12222 2379999999999999998854
No 101
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.45 E-value=6.7e-13 Score=115.16 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=87.1
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHH-CCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDL-YPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~-~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~ 152 (269)
.+.+..+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|++++.... ..++++++.+|+.+....++||+
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~D~ 184 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG----LIERVTIKVRDISEGFDEKDVDA 184 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT----CGGGEEEECCCGGGCCSCCSEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCCCEEEEECCHHHcccCCccCE
Confidence 3456789999999999999999998 568899999999999999999864221 12479999999988744568999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|++|... ..++++.+.+.|+|||.+++....
T Consensus 185 V~~~~~~---------~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 185 LFLDVPD---------PWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp EEECCSC---------GGGTHHHHHHHEEEEEEEEEEESS
T ss_pred EEECCcC---------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9996532 247899999999999999998743
No 102
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.44 E-value=2e-13 Score=116.17 Aligned_cols=97 Identities=16% Similarity=0.140 Sum_probs=80.1
Q ss_pred CCCcEEEEcCcccHHHHHHHHH----CCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----c-cC
Q 035593 77 PPGPIGILGFGAGSAARLILDL----YPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----S-LK 147 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~----~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~-~~ 147 (269)
++.+|||||||+|..+..+++. .|+.+|++||+++++++.|+. . .++++++++|+.+. . ..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~-------~~~v~~~~gD~~~~~~l~~~~~ 150 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D-------MENITLHQGDCSDLTTFEHLRE 150 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G-------CTTEEEEECCSSCSGGGGGGSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c-------CCceEEEECcchhHHHHHhhcc
Confidence 5689999999999999999987 578999999999999988872 1 25799999999884 2 23
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHh-hccCCcEEEEEe
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQ-CLRKGGRIMVNV 190 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~-~L~pgG~l~~~~ 190 (269)
.+||+|++|... ....++++.+.+ .|+|||++++..
T Consensus 151 ~~fD~I~~d~~~-------~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 151 MAHPLIFIDNAH-------ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SCSSEEEEESSC-------SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCCEEEECCch-------HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 379999998652 134689999997 999999999864
No 103
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.44 E-value=7.9e-13 Score=120.14 Aligned_cols=140 Identities=14% Similarity=0.024 Sum_probs=100.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILV 155 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~ 155 (269)
++.+|||+|||+|.++..+++. +.+|++||+|+.+++.|++++... ..+++++.+|+.+. ...++||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~------~~~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEAN------ALKAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHT------TCCCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc------CCCeEEEEcchhhccccCCCeEEEEE
Confidence 5779999999999999999984 679999999999999999987533 23489999999987 44579999999
Q ss_pred cCCCCCCCC-CCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEEcCCCCce
Q 035593 156 DLFSKGSLL-SELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLSLGNRKDD 234 (269)
Q Consensus 156 d~~~~~~~~-~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~~~~n~ 234 (269)
+..-+.... ..-...++++.+++.|+|||.+++...... .....+++.|+ .+..+. ..+=.
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l---------------~~~~~l~~~f~-~v~~l~--~~gF~ 366 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL---------------KYEPLLEEKFG-AFQTLK--VAEYK 366 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS---------------CHHHHHHHHHS-CCEEEE--ESSSE
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC---------------ChHHHHHHhhc-cEEEEe--CCCEE
Confidence 754332111 011235899999999999999999775432 12355778897 455442 22334
Q ss_pred EEEEecCC
Q 035593 235 SLIALTGE 242 (269)
Q Consensus 235 v~~~~~~~ 242 (269)
|+-+.+.+
T Consensus 367 Vl~a~~~~ 374 (381)
T 3dmg_A 367 VLFAEKRG 374 (381)
T ss_dssp EEEEECC-
T ss_pred EEEEEEec
Confidence 45444443
No 104
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.44 E-value=1.2e-12 Score=109.04 Aligned_cols=100 Identities=21% Similarity=0.271 Sum_probs=82.2
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||+|.++..+++. +.+++++|+++.+++.|++.+. .+++++.+|+.++...++||+|++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~~~~~~~fD~v~~ 112 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLSFEVPTSIDTIVS 112 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSSCCCCSCCSEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhhcCCCCCeEEEEE
Confidence 36789999999999999999984 7799999999999999999864 368999999998833389999998
Q ss_pred cCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEec
Q 035593 156 DLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 156 d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
... ..++.. ..+++++++.|+|||.+++...
T Consensus 113 ~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 113 TYA-----FHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp ESC-----GGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred Ccc-----hhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 632 122222 2399999999999999998764
No 105
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.44 E-value=6.3e-13 Score=120.63 Aligned_cols=118 Identities=17% Similarity=0.118 Sum_probs=89.6
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
|.+.+.....+.++++|||||||+|.++..++++ ...+|++||++ .+++.|++++.... ...+++++.+|+.++
T Consensus 51 ~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 51 YFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANN----LDHIVEVIEGSVEDI 124 (376)
T ss_dssp HHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTT----CTTTEEEEESCGGGC
T ss_pred HHHHHHhccccCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcC----CCCeEEEEECchhhc
Confidence 4445544444567899999999999999999985 34499999999 99999999875332 135799999999988
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
..+++||+|+++..... ....-....+++.+.+.|+|||++++.
T Consensus 125 ~~~~~~D~Iv~~~~~~~-l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 125 SLPEKVDVIISEWMGYF-LLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CCSSCEEEEEECCCBTT-BTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred CcCCcceEEEEcChhhc-ccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 54489999998653221 111222467999999999999999764
No 106
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.44 E-value=2.8e-13 Score=121.70 Aligned_cols=118 Identities=14% Similarity=0.109 Sum_probs=88.8
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
|.+.+.....+.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++....+ ..+++++.+|+.++
T Consensus 54 ~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~----~~~v~~~~~d~~~~ 127 (349)
T 3q7e_A 54 YRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKL----DHVVTIIKGKVEEV 127 (349)
T ss_dssp HHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC----TTTEEEEESCTTTC
T ss_pred HHHHHHhccccCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCC----CCcEEEEECcHHHc
Confidence 4444443333457889999999999999999985 566999999995 99999988753321 35799999999998
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
...++||+|+++..... ....-....+++.+.+.|+|||+++..
T Consensus 128 ~~~~~~fD~Iis~~~~~~-l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 128 ELPVEKVDIIISEWMGYC-LFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCSSSCEEEEEECCCBBT-BTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cCCCCceEEEEEcccccc-ccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 45689999998643221 112223468999999999999998754
No 107
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.44 E-value=3.7e-13 Score=114.59 Aligned_cols=108 Identities=16% Similarity=0.216 Sum_probs=83.7
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++... ..+++++.+|+.+....++||+|++
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~fD~v~~ 111 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKER------NLKIEFLQGDVLEIAFKNEFDAVTM 111 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT------TCCCEEEESCGGGCCCCSCEEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhc------CCceEEEECChhhcccCCCccEEEE
Confidence 45789999999999999999884 679999999999999999986422 2469999999998754578999996
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
...... ....-....+++.+++.|+|||.+++....
T Consensus 112 ~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 112 FFSTIM-YFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp CSSGGG-GSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCchh-cCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 421110 101011358999999999999999987643
No 108
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.43 E-value=8.8e-14 Score=125.90 Aligned_cols=121 Identities=19% Similarity=0.212 Sum_probs=91.6
Q ss_pred cchHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccc
Q 035593 62 TNTYFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNA 141 (269)
Q Consensus 62 ~~~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~ 141 (269)
...|.++|.....+.+.+.|||||||+|.++..+++. ...+|++||.++ +++.|++....+.+ ..+++++.+|.
T Consensus 68 t~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~~----~~~i~~i~~~~ 141 (376)
T 4hc4_A 68 TDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNGL----EDRVHVLPGPV 141 (376)
T ss_dssp HHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTTC----TTTEEEEESCT
T ss_pred HHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcCC----CceEEEEeeee
Confidence 3456666654333446889999999999999988873 345899999997 88999987654432 46899999999
Q ss_pred cccccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 142 LKASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 142 ~~~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.++..++++|+|++..... ....+-....++....+.|+|||+++-+
T Consensus 142 ~~~~lpe~~DvivsE~~~~-~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 142 ETVELPEQVDAIVSEWMGY-GLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTCCCSSCEEEEECCCCBT-TBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eeecCCccccEEEeecccc-cccccchhhhHHHHHHhhCCCCceECCc
Confidence 9997778999999866543 1222333568888889999999988743
No 109
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.43 E-value=5e-13 Score=110.50 Aligned_cols=104 Identities=14% Similarity=0.158 Sum_probs=83.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.++.+|||||||+|.++..+++ .+..+|+++|+++.+++.|++++.... ..+++++.+|+.++. .++||+|+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~-~~~fD~i~ 130 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNG-----IYDIALQKTSLLADV-DGKFDLIV 130 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTT-----CCCCEEEESSTTTTC-CSCEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEeccccccC-CCCceEEE
Confidence 34678999999999999999887 466799999999999999999875332 223999999998763 47899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++.... + ...+++.+++.|+|||.+++....
T Consensus 131 ~~~~~~-----~--~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 131 ANILAE-----I--LLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EESCHH-----H--HHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred ECCcHH-----H--HHHHHHHHHHhcCCCCEEEEEecC
Confidence 874321 1 367899999999999999986543
No 110
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.43 E-value=1.3e-12 Score=115.44 Aligned_cols=111 Identities=13% Similarity=0.094 Sum_probs=86.4
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGI 153 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I 153 (269)
.+.+..+|||||||+|.++..+++.+ +.+|+++|+++.+++.|++.+.... ..++++++.+|+.++. ++||+|
T Consensus 87 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~--~~fD~v 159 (318)
T 2fk8_A 87 DLKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASID----TNRSRQVLLQGWEDFA--EPVDRI 159 (318)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSC----CSSCEEEEESCGGGCC--CCCSEE
T ss_pred CCCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC----CCCceEEEECChHHCC--CCcCEE
Confidence 35578899999999999999999865 6799999999999999999864221 1357999999997763 789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++...-. ..+. -...++++++.+.|+|||.+++..+..
T Consensus 160 ~~~~~l~-~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 160 VSIEAFE-HFGH-ENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp EEESCGG-GTCG-GGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred EEeChHH-hcCH-HHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 9752111 0110 124689999999999999999877654
No 111
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.43 E-value=5.9e-13 Score=108.92 Aligned_cols=106 Identities=18% Similarity=0.273 Sum_probs=82.9
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||+|..+..+++. +.+++++|+++.+++.|++++.... .++++++.+|+.+....++||+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~D~v~~ 103 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIEN-----LDNLHTRVVDLNNLTFDRQYDFILS 103 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEECCGGGCCCCCCEEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCC-----CCCcEEEEcchhhCCCCCCceEEEE
Confidence 46789999999999999999984 6799999999999999999864322 2469999999988733788999997
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
...-. ... .-....+++.+++.|+|||.+++..
T Consensus 104 ~~~l~-~~~-~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 104 TVVLM-FLE-AKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ESCGG-GSC-GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhh-hCC-HHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 63211 111 1124689999999999999976643
No 112
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.43 E-value=2.2e-13 Score=115.15 Aligned_cols=109 Identities=21% Similarity=0.311 Sum_probs=83.9
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|.++..+++. .+++++|+++.+++.|++++... ..+++++.+|+.+....++||+|+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~~~fD~v~ 101 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET------NRHVDFWVQDMRELELPEPVDAIT 101 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT------TCCCEEEECCGGGCCCSSCEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc------CCceEEEEcChhhcCCCCCcCEEE
Confidence 345789999999999999998874 79999999999999999986422 257999999998874457899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+...........-....+++.+++.|+|||.+++.+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 102 ILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp ECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 74211001111112357899999999999999998754
No 113
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=9.5e-13 Score=111.69 Aligned_cols=109 Identities=16% Similarity=0.177 Sum_probs=85.0
Q ss_pred CCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc------c
Q 035593 73 PPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS------L 146 (269)
Q Consensus 73 ~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~------~ 146 (269)
+.+.+..+|||||||+|..+..+++..+ +|+++|+|+.+++.|++++. ..+++++++|+.+.. .
T Consensus 52 ~~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~~~ 121 (245)
T 3ggd_A 52 LLFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT--------AANISYRLLDGLVPEQAAQIHS 121 (245)
T ss_dssp TTSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC--------CTTEEEEECCTTCHHHHHHHHH
T ss_pred hccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc--------ccCceEEECccccccccccccc
Confidence 3456788999999999999999998765 89999999999999999873 347999999998861 1
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
...||+|++...-+. . +.-....+++++++.|+|||.+++..+..
T Consensus 122 ~~~~d~v~~~~~~~~-~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 122 EIGDANIYMRTGFHH-I-PVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp HHCSCEEEEESSSTT-S-CGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred ccCccEEEEcchhhc-C-CHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 235999998643321 1 11123689999999999999877766543
No 114
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.43 E-value=1.6e-12 Score=110.23 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=84.9
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.+..+|||||||+|.++..+++.. .+|+++|+++.+++.|++++.... -++++++.+|+..+ ...++||+
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~ 90 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG-----VENVRFQQGTAESLPFPDDSFDI 90 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT-----CCSEEEEECBTTBCCSCTTCEEE
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC-----CCCeEEEecccccCCCCCCcEEE
Confidence 34578899999999999999998854 499999999999999998864321 24799999999887 45678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|++..... .. -....+++++++.|+|||.+++...
T Consensus 91 v~~~~~l~-~~---~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 91 ITCRYAAH-HF---SDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp EEEESCGG-GC---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCchh-hc---cCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99763211 11 1246899999999999999988544
No 115
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.42 E-value=1.7e-12 Score=105.18 Aligned_cols=121 Identities=15% Similarity=0.120 Sum_probs=93.1
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.|++++.... ..++++++.+|+.+. ...++||+
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~D~ 103 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG----LGDNVTLMEGDAPEALCKIPDIDI 103 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT----CCTTEEEEESCHHHHHTTSCCEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC----CCcceEEEecCHHHhcccCCCCCE
Confidence 34578899999999999999999854 899999999999999999864322 125799999998874 33358999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH-h
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV-F 219 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-F 219 (269)
|+++.... ...++++.+.+.|+|||.+++..... .....+.+.+++. |
T Consensus 104 v~~~~~~~-------~~~~~l~~~~~~l~~gG~l~~~~~~~------------~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 104 AVVGGSGG-------ELQEILRIIKDKLKPGGRIIVTAILL------------ETKFEAMECLRDLGF 152 (192)
T ss_dssp EEESCCTT-------CHHHHHHHHHHTEEEEEEEEEEECBH------------HHHHHHHHHHHHTTC
T ss_pred EEECCchH-------HHHHHHHHHHHhcCCCcEEEEEecCc------------chHHHHHHHHHHCCC
Confidence 99864321 14789999999999999999987543 1244556666655 5
No 116
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.42 E-value=3e-13 Score=109.67 Aligned_cols=109 Identities=24% Similarity=0.151 Sum_probs=85.0
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----cCCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----LKDG 149 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~~~~ 149 (269)
..++.+|||+|||+|.++..+++ .+..+|+++|+++.+++.|++++.... ..++++++.+|+.++ . ..++
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~ 116 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITK----EPEKFEVRKMDANRALEQFYEEKLQ 116 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred hcCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhC----CCcceEEEECcHHHHHHHHHhcCCC
Confidence 35678999999999999998887 456799999999999999999875332 124799999999886 2 2678
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHH--HhhccCCcEEEEEecCC
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKL--RQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~--~~~L~pgG~l~~~~~~~ 193 (269)
||+|+++..-. .....++++.+ .+.|+|||++++.....
T Consensus 117 fD~i~~~~~~~-----~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 117 FDLVLLDPPYA-----KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEEEEECCCGG-----GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCEEEECCCCC-----chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 99999874311 11245777777 88899999999877554
No 117
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.42 E-value=2.3e-13 Score=112.47 Aligned_cols=107 Identities=15% Similarity=0.084 Sum_probs=82.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
..++.+|||+|||+|..+..++.. ++.+|+++|+++.+++.|++++... ..+++++.+|+.+. ...++||+|
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v 93 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSREN------NFKLNISKGDIRKLPFKDESMSFV 93 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHH------TCCCCEEECCTTSCCSCTTCEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhc------CCceEEEECchhhCCCCCCceeEE
Confidence 446789999999999985444433 5789999999999999999886432 25689999999887 456789999
Q ss_pred EEcCCCCCCCCCCC---CcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSKGSLLSEL---EDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~~~~~~~l---~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++... ..++ ....+++++++.|+|||.+++..++.
T Consensus 94 ~~~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 94 YSYGT-----IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp EECSC-----GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EEcCh-----HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 97421 1122 23689999999999999999987654
No 118
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.42 E-value=7.2e-13 Score=115.70 Aligned_cols=109 Identities=17% Similarity=0.172 Sum_probs=86.6
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.++.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++.... ..++++++.+|+.+. ..+++||+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~fD~ 153 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAG----LADNITVKYGSFLEIPCEDNSYDF 153 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHT----CTTTEEEEECCTTSCSSCTTCEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcC----CCcceEEEEcCcccCCCCCCCEeE
Confidence 45678899999999999999999865 5699999999999999998864221 135799999999887 45678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|++...-. ..+ ....+++++++.|||||.+++...
T Consensus 154 v~~~~~l~-~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 154 IWSQDAFL-HSP---DKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp EEEESCGG-GCS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEecchhh-hcC---CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 99752211 111 147899999999999999988754
No 119
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.42 E-value=2e-13 Score=119.60 Aligned_cols=112 Identities=24% Similarity=0.326 Sum_probs=85.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++...... ...+++++++|+.++...++||+|++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~v~~~~~d~~~~~~~~~fD~v~~~ 157 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPAD--VRDRCTLVQGDMSAFALDKRFGTVVIS 157 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHH--HHTTEEEEECBTTBCCCSCCEEEEEEC
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccc--cccceEEEeCchhcCCcCCCcCEEEEC
Confidence 3569999999999999999984 679999999999999999987422100 015799999999988557899999863
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
.... ...+.-....+++++++.|+|||.|++..+..
T Consensus 158 ~~~~-~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 158 SGSI-NELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHHH-TTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred Cccc-ccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 1100 01110012689999999999999999998765
No 120
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.42 E-value=6.8e-13 Score=118.83 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=86.8
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
|.+.+.....+.++.+|||||||+|.++..+++. +..+|+++|+++ +++.|++++....+ .++++++.+|+.++
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~ 125 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKL----EDTITLIKGKIEEV 125 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTC----TTTEEEEESCTTTS
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCC----CCcEEEEEeeHHHh
Confidence 4455544434567889999999999999999985 456999999997 99999988743321 36899999999988
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIM 187 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~ 187 (269)
...++||+|+++.... ..........+++.+.+.|+|||+++
T Consensus 126 ~~~~~~~D~Ivs~~~~~-~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 126 HLPVEKVDVIISEWMGY-FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCSCSCEEEEEECCCBT-TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCCCcEEEEEEcCchh-hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 4457999999864211 11111123579999999999999987
No 121
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.42 E-value=1.4e-12 Score=110.87 Aligned_cols=104 Identities=14% Similarity=0.017 Sum_probs=84.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
..++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.. .++++++.+|+.+. ...++||+|
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v 162 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG-------MPVGKFILASMETATLPPNTYDLI 162 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT-------SSEEEEEESCGGGCCCCSSCEEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc-------CCceEEEEccHHHCCCCCCCeEEE
Confidence 3467899999999999999998864 56899999999999999998752 25799999999887 456789999
Q ss_pred EEcCCCCCCCCCCCC---cHHHHHHHHhhccCCcEEEEEec
Q 035593 154 LVDLFSKGSLLSELE---DPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~---~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
++... ..++. ...+++++++.|+|||.+++...
T Consensus 163 ~~~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 163 VIQWT-----AIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEESC-----GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcch-----hhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 97432 12221 36899999999999999988653
No 122
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.42 E-value=1.5e-12 Score=112.67 Aligned_cols=120 Identities=18% Similarity=0.224 Sum_probs=94.2
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHH-CCCceEEEEECChHHHHHHHHhcCcc-ccccCCCCcEEEEEcccccc-ccCCCe
Q 035593 74 PILPPGPIGILGFGAGSAARLILDL-YPEAVIHGWELDPSVIKVAREFFALE-KLEKSYPDRLFVYVGNALKA-SLKDGF 150 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~-~p~~~v~~vEidp~~~~~a~~~~~~~-~~~~~~~~rv~~~~~D~~~~-~~~~~y 150 (269)
.+.+..+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|++++... .. ..++++++.+|+.+. ...+.|
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~---~~~~v~~~~~d~~~~~~~~~~~ 172 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ---PPDNWRLVVSDLADSELPDGSV 172 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS---CCTTEEEECSCGGGCCCCTTCE
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC---CCCcEEEEECchHhcCCCCCce
Confidence 3557889999999999999999985 46789999999999999999986321 00 025799999999887 446789
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHH
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHK 217 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (269)
|+|+++... ..++++.+.+.|+|||.+++..... .....+...+++
T Consensus 173 D~v~~~~~~---------~~~~l~~~~~~L~pgG~l~~~~~~~------------~~~~~~~~~l~~ 218 (280)
T 1i9g_A 173 DRAVLDMLA---------PWEVLDAVSRLLVAGGVLMVYVATV------------TQLSRIVEALRA 218 (280)
T ss_dssp EEEEEESSC---------GGGGHHHHHHHEEEEEEEEEEESSH------------HHHHHHHHHHHH
T ss_pred eEEEECCcC---------HHHHHHHHHHhCCCCCEEEEEeCCH------------HHHHHHHHHHHh
Confidence 999997542 2478999999999999999988542 234566666765
No 123
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.42 E-value=1.1e-12 Score=112.05 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=84.6
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++. . ..++++++.+|+.+. ...++||+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-~-----~~~~~~~~~~d~~~~~~~~~~fD~ 107 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIA-G-----VDRKVQVVQADARAIPLPDESVHG 107 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTT-T-----SCTTEEEEESCTTSCCSCTTCEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh-c-----cCCceEEEEcccccCCCCCCCeeE
Confidence 4567889999999999999999884 6799999999999999999872 1 146899999999887 45678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|++...-+ ..+ ....+++++++.|+|||.+++.
T Consensus 108 v~~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 108 VIVVHLWH-LVP---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEESCGG-GCT---THHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCchh-hcC---CHHHHHHHHHHHCCCCcEEEEE
Confidence 99753211 111 2468999999999999999887
No 124
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.42 E-value=7.3e-13 Score=115.10 Aligned_cols=106 Identities=16% Similarity=0.112 Sum_probs=85.2
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~ 154 (269)
++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++.+.... ..++++++.+|+.+. ...++||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKG----VSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-C----CGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC----CCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 3679999999999999999984 7799999999999999999874322 125899999999987 3668999999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+...-. .. -....+++++++.|+|||.+++..++
T Consensus 142 ~~~~l~-~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 142 FHAVLE-WV---ADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EESCGG-GC---SCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred ECchhh-cc---cCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 853211 11 12368999999999999999998754
No 125
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.42 E-value=1.4e-12 Score=110.04 Aligned_cols=105 Identities=17% Similarity=0.131 Sum_probs=84.0
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
..++.+|||||||+|..+..+++. ...+++++|+++.+++.|++.+. ..+++++.+|+.+. ...++||+|
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGP--------DTGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC--------SSSEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcc--------cCCceEEEcChhhccCCCCCceEE
Confidence 346789999999999999999885 22399999999999999999864 24699999999887 456789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++...-. .. -....+++.+++.|+|||.+++....
T Consensus 112 ~~~~~l~-~~---~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 112 YSSLALH-YV---EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEESCGG-GC---SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEecccc-cc---chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 9753211 11 12468999999999999999987643
No 126
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.42 E-value=3.3e-13 Score=111.79 Aligned_cols=108 Identities=16% Similarity=0.025 Sum_probs=82.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c--cCCC-eeE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S--LKDG-FSG 152 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~--~~~~-yD~ 152 (269)
++.+|||+|||+|.++..++.. ...+|++||+|+.+++.|++++..... ..++++++.+|+.++ . ..++ ||+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQTLKC---SSEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTTC---CTTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHHhCC---CccceEEEECCHHHHHHhhccCCCCCE
Confidence 5789999999999999987764 346999999999999999998743220 015799999999886 2 2568 999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHH--HhhccCCcEEEEEecCC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKL--RQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~--~~~L~pgG~l~~~~~~~ 193 (269)
|++|..-. .-...++++.+ .+.|+|||++++.....
T Consensus 129 I~~~~~~~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 129 VFLDPPFH-----FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEECCCSS-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEECCCCC-----CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 99875411 11135788888 56799999999877543
No 127
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=3.3e-12 Score=102.78 Aligned_cols=116 Identities=14% Similarity=0.028 Sum_probs=91.1
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGI 153 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I 153 (269)
.+.++.+|||+|||+|.++..+++ +..+++++|+++.+++.|++++.... -++++++.+|+.+....++||+|
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~D~i 104 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN-----IKNCQIIKGRAEDVLDKLEFNKA 104 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT-----CCSEEEEESCHHHHGGGCCCSEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC-----CCcEEEEECCccccccCCCCcEE
Confidence 345678999999999999999988 78899999999999999999874322 25799999999875344789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV 218 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (269)
+++.. ....++++.+++. |||.+++..... .....+.+.+++.
T Consensus 105 ~~~~~--------~~~~~~l~~~~~~--~gG~l~~~~~~~------------~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 105 FIGGT--------KNIEKIIEILDKK--KINHIVANTIVL------------ENAAKIINEFESR 147 (183)
T ss_dssp EECSC--------SCHHHHHHHHHHT--TCCEEEEEESCH------------HHHHHHHHHHHHT
T ss_pred EECCc--------ccHHHHHHHHhhC--CCCEEEEEeccc------------ccHHHHHHHHHHc
Confidence 98654 1247899999888 999999988543 1244556666655
No 128
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=1.6e-12 Score=108.19 Aligned_cols=104 Identities=19% Similarity=0.277 Sum_probs=82.6
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCee
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFS 151 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD 151 (269)
.+.++.+|||||||+|.++..+++.. |..+|+++|+++.+++.|++++.... -++++++.+|+... ...++||
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD 148 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-----YDNVIVIVGDGTLGYEPLAPYD 148 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-----CTTEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCeEEEECCcccCCCCCCCee
Confidence 45578899999999999999999876 55899999999999999999874221 24699999998655 4467899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+|+++...+ ++ .+.+.+.|+|||.+++.+..
T Consensus 149 ~v~~~~~~~-----~~-----~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 149 RIYTTAAGP-----KI-----PEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EEEESSBBS-----SC-----CHHHHHTEEEEEEEEEEESS
T ss_pred EEEECCchH-----HH-----HHHHHHHcCCCcEEEEEECC
Confidence 999864322 11 15889999999999998854
No 129
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.40 E-value=2.7e-12 Score=108.85 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=85.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc-cCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS-LKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~-~~~~yD~I 153 (269)
+.+..+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++.... .+++++++.+|+.+.. ..+.||+|
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~D~v 162 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFN----LGKNVKFFNVDFKDAEVPEGIFHAA 162 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTT----CCTTEEEECSCTTTSCCCTTCBSEE
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC----CCCcEEEEEcChhhcccCCCcccEE
Confidence 456789999999999999999987 7799999999999999999864221 1357999999998874 66789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+++..+ ..++++.+.+.|+|||.+++....
T Consensus 163 ~~~~~~---------~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 163 FVDVRE---------PWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp EECSSC---------GGGGHHHHHHHBCTTCEEEEEESS
T ss_pred EECCcC---------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 986432 247899999999999999998853
No 130
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.40 E-value=1.2e-12 Score=117.64 Aligned_cols=123 Identities=16% Similarity=0.020 Sum_probs=92.5
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK 143 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~ 143 (269)
....|..+..+.+..+|||+|||+|.++..++... |+.+|+++|+|+.+++.|++++...+ -++++++++|+.+
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-----~~~i~~~~~D~~~ 265 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-----LSWIRFLRADARH 265 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-----CTTCEEEECCGGG
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-----CCceEEEeCChhh
Confidence 33444433345578899999999999999999876 78999999999999999999875332 1279999999999
Q ss_pred c-ccCCCeeEEEEcCCCCCCCCCCC----CcHHHHHHHHhhccCCcEEEEEecC
Q 035593 144 A-SLKDGFSGILVDLFSKGSLLSEL----EDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 144 ~-~~~~~yD~I~~d~~~~~~~~~~l----~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+ ...+.||+|++|.+-........ ...++++.+++.|+|||.+++....
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 8 44567899999864332111110 0157899999999999999997643
No 131
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.40 E-value=5.7e-13 Score=106.38 Aligned_cols=103 Identities=12% Similarity=-0.033 Sum_probs=81.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--c---cCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--S---LKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~---~~~~yD 151 (269)
++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++.... .+++++.+|+.++ . ..++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTG------LGARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHT------CCCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcC------CceEEEeccHHHHHHhhhccCCceE
Confidence 67899999999999999999854 349999999999999999875332 2799999999875 1 134899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHH--hhccCCcEEEEEecCC
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLR--QCLRKGGRIMVNVGGS 193 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~--~~L~pgG~l~~~~~~~ 193 (269)
+|+++..-. -...++++.+. +.|+|||++++.....
T Consensus 113 ~i~~~~~~~------~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 113 VAFMAPPYA------MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEEECCCTT------SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EEEECCCCc------hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 999975321 12356777777 9999999999988654
No 132
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.40 E-value=8.1e-13 Score=109.53 Aligned_cols=105 Identities=19% Similarity=0.007 Sum_probs=81.9
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~ 154 (269)
+..+|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++.... -++++++++|+.++ ...++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~D~~~~~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLK-----AGNARVVNSNAMSFLAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT-----CCSEEEECSCHHHHHSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEECCHHHHHhhcCCCCCEEE
Confidence 57899999999999999877642 3599999999999999999875332 24799999999886 3456899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHh--hccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQ--CLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~--~L~pgG~l~~~~~~ 192 (269)
+|..-. .-...++++.+.+ .|+|||++++....
T Consensus 128 ~~~p~~-----~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 128 VDPPFR-----RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ECCSSS-----TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ECCCCC-----CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 975411 1124578888876 49999999987754
No 133
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.40 E-value=1.7e-12 Score=112.64 Aligned_cols=115 Identities=14% Similarity=0.055 Sum_probs=89.6
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCC-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----cCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----LKD 148 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~~~ 148 (269)
..+..+|||+|||+|..+..+++..++ .+|+++|+++.+++.+++++.... -++++++.+|+.++ . ..+
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG-----VLNTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCHHHHHHHHHHTTC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC-----CCcEEEEeCChHhcchhhhhccc
Confidence 346789999999999999999988776 899999999999999998864322 24799999999887 2 267
Q ss_pred CeeEEEEcCCCCC-CCCC-------------CCCcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 149 GFSGILVDLFSKG-SLLS-------------ELEDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 149 ~yD~I~~d~~~~~-~~~~-------------~l~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
+||+|++|+.-.. +... .-...++++.+.+.|||||.+++...+..
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 8999999964321 1100 01236899999999999999999876653
No 134
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.40 E-value=9.2e-13 Score=111.27 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=82.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKDG 149 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~~ 149 (269)
+.+..+|||+|||+|.++..+++.. |+.+|+++|+++.+++.+.+.... .++++++.+|+.+. ...++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-------~~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-------RTNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-------CTTEEEECSCTTCGGGGGGGCCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-------cCCeEEEEcccCChhhhcccCCc
Confidence 4567899999999999999999875 678999999999887776665432 24799999999874 24578
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
||+|++|..... ....+++++.+.|+|||++++.+.
T Consensus 148 ~D~V~~~~~~~~------~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 148 VDVIFADVAQPD------QTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EEEEEECCCCTT------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEEcCCCcc------HHHHHHHHHHHHcCCCeEEEEEEc
Confidence 999999754211 124568889999999999999654
No 135
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.40 E-value=5.6e-12 Score=110.12 Aligned_cols=109 Identities=17% Similarity=0.266 Sum_probs=84.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCe---eEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGF---SGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~y---D~I 153 (269)
++.+|||||||+|.++..+++. |+.+|+++|+|+.+++.|+++..... ...+++++++|+.+... ++| |+|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~----l~~~v~~~~~D~~~~~~-~~f~~~D~I 196 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHG----VSDRFFVRKGEFLEPFK-EKFASIEMI 196 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTT----CTTSEEEEESSTTGGGG-GGTTTCCEE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECcchhhcc-cccCCCCEE
Confidence 4679999999999999999998 89999999999999999999874322 13469999999987532 478 999
Q ss_pred EEcCCCCCC---CCC---C---------CCcHHHHHHHH-hhccCCcEEEEEec
Q 035593 154 LVDLFSKGS---LLS---E---------LEDPNTWEKLR-QCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~---~~~---~---------l~~~e~~~~~~-~~L~pgG~l~~~~~ 191 (269)
+++.+-... ..+ + ....++++.+. +.|+|||.+++.+.
T Consensus 197 vsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp EECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred EEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 997421110 000 0 01137999999 99999999998664
No 136
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=1.8e-12 Score=107.12 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=85.7
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.++.+|||||||+|.++..+++..+. +|+++|+++.+++.|++++.. .++++++.+|+.+. ...++||+|
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-------~~~i~~~~~d~~~~~~~~~~fD~v 111 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-------VPQLRWETMDVRKLDFPSASFDVV 111 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-------CTTCEEEECCTTSCCSCSSCEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-------CCCcEEEEcchhcCCCCCCcccEE
Confidence 457889999999999999999985333 899999999999999998752 25799999999887 456789999
Q ss_pred EEcCCCC-----CCCCCC------CCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSK-----GSLLSE------LEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~-----~~~~~~------l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++...-. ...+.. -....+++++.+.|+|||.+++..++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 9742110 000000 012689999999999999999988654
No 137
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.40 E-value=9.4e-13 Score=113.10 Aligned_cols=103 Identities=20% Similarity=0.176 Sum_probs=82.5
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.++.+|||+|||+|.++..+++.. .+|+++|+||.+++.|++++..+. -. ++++.+|+.+....++||+|+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g--~~v~gvDi~~~~v~~a~~n~~~~~-----~~-v~~~~~d~~~~~~~~~fD~Vv 189 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLG--GKALGVDIDPMVLPQAEANAKRNG-----VR-PRFLEGSLEAALPFGPFDLLV 189 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCGGGHHHHHHHHHHTT-----CC-CEEEESCHHHHGGGCCEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhC--CeEEEEECCHHHHHHHHHHHHHcC-----Cc-EEEEECChhhcCcCCCCCEEE
Confidence 3568899999999999999988843 399999999999999999875432 12 899999987753456899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++.... . ..++++.+.+.|+|||.+++....
T Consensus 190 ~n~~~~-----~--~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 190 ANLYAE-----L--HAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp EECCHH-----H--HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCcHH-----H--HHHHHHHHHHHcCCCCEEEEEeec
Confidence 864321 1 368999999999999999986543
No 138
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.40 E-value=5.1e-13 Score=114.65 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=80.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++. +++++.+|+.++...++||+|++.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~~~~~fD~v~~~ 117 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP----------DAVLHHGDMRDFSLGRRFSAVTCM 117 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTCCCSCCEEEEEEC
T ss_pred CCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC----------CCEEEECChHHCCccCCcCEEEEc
Confidence 5689999999999999999884 5689999999999999999752 589999999988557899999974
Q ss_pred CCCCCCCCCCC----CcHHHHHHHHhhccCCcEEEEEe
Q 035593 157 LFSKGSLLSEL----EDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 157 ~~~~~~~~~~l----~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.. ...++ ....+++++++.|+|||.+++..
T Consensus 118 ~~----~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 118 FS----SIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp TT----GGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred Cc----hhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 21 11222 23478999999999999999964
No 139
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=1.6e-12 Score=112.65 Aligned_cols=103 Identities=22% Similarity=0.327 Sum_probs=84.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.++.+|||||||+|.++..+++ ++.+|+++|+++.+++.|++.+ ++++++.+|+..+...++||+|+
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~fD~v~ 122 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY----------PHLHFDVADARNFRVDKPLDAVF 122 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTTCCCSSCEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhhCCcCCCcCEEE
Confidence 34678999999999999999998 7889999999999999999875 25789999998874467999999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+...-. .. .....+++++++.|+|||.+++..+..
T Consensus 123 ~~~~l~-~~---~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 123 SNAMLH-WV---KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EESCGG-GC---SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred Ecchhh-hC---cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 753211 01 124689999999999999999977654
No 140
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.39 E-value=2e-12 Score=115.35 Aligned_cols=123 Identities=16% Similarity=0.211 Sum_probs=90.7
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHH-CCCceEEEEECChHHHHHHHHhcCc-------cccccCCCCcEEEEEcccccc-
Q 035593 74 PILPPGPIGILGFGAGSAARLILDL-YPEAVIHGWELDPSVIKVAREFFAL-------EKLEKSYPDRLFVYVGNALKA- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~-~p~~~v~~vEidp~~~~~a~~~~~~-------~~~~~~~~~rv~~~~~D~~~~- 144 (269)
.+.+..+|||+|||+|.++..+++. .|..+|+++|+++.+++.|++++.. +... ....+++++.+|+.+.
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~-~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE-EWPDNVDFIHKDISGAT 180 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS-CCCCCEEEEESCTTCCC
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc-ccCCceEEEECChHHcc
Confidence 3557889999999999999999987 4668999999999999999998641 1100 0125799999999886
Q ss_pred --ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH
Q 035593 145 --SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV 218 (269)
Q Consensus 145 --~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (269)
...++||+|++|...+ ..+++.+.+.|+|||.+++..... ......++.+++.
T Consensus 181 ~~~~~~~fD~V~~~~~~~---------~~~l~~~~~~LkpgG~lv~~~~~~------------~~~~~~~~~l~~~ 235 (336)
T 2b25_A 181 EDIKSLTFDAVALDMLNP---------HVTLPVFYPHLKHGGVCAVYVVNI------------TQVIELLDGIRTC 235 (336)
T ss_dssp -------EEEEEECSSST---------TTTHHHHGGGEEEEEEEEEEESSH------------HHHHHHHHHHHHH
T ss_pred cccCCCCeeEEEECCCCH---------HHHHHHHHHhcCCCcEEEEEeCCH------------HHHHHHHHHHHhc
Confidence 2345799999976433 237899999999999999877532 2355566666653
No 141
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.39 E-value=7.3e-13 Score=111.58 Aligned_cols=105 Identities=18% Similarity=0.170 Sum_probs=81.5
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||+|..+..+++..+ +++++|+++.+++.|++.+ ++++++.+|+.++...++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL----------PDATLHQGDMRDFRLGRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC----------TTCEEEECCTTTCCCSSCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC----------CCCEEEECCHHHcccCCCCcEEEE
Confidence 4678999999999999999998754 8999999999999999875 258999999988744778999995
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
....-......-....+++.+++.|+|||.+++..+.
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 2110000111011258999999999999999997654
No 142
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.39 E-value=3.7e-12 Score=112.86 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=89.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
..+..+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++.... -++++++++|+..+ ...++||+
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-----VLNVILFHSSSLHIGELNVEFDK 190 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-----CCSEEEESSCGGGGGGGCCCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-----CCeEEEEECChhhcccccccCCE
Confidence 45678999999999999999998875 5799999999999999999874322 24699999999987 44668999
Q ss_pred EEEcCCCC-CCCC---CCC---C-----------cHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 153 ILVDLFSK-GSLL---SEL---E-----------DPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 153 I~~d~~~~-~~~~---~~l---~-----------~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
|++|+.-. .++. +.. . ..++++.+.+.|||||.+++...+..
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 99996532 1111 100 0 14899999999999999999776543
No 143
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.39 E-value=1.6e-12 Score=115.11 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=83.6
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCee
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFS 151 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD 151 (269)
.+.++.+|||||||+|.++..+++..+ +.+|+++|+++++++.|++++.... -++++++.+|+.+. ...++||
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-----~~~v~~~~~d~~~~~~~~~~fD 146 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-----IENVIFVCGDGYYGVPEFSPYD 146 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCeEEEECChhhccccCCCeE
Confidence 456788999999999999999998766 4789999999999999999874322 23599999999886 4457899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+|+++.... ++. +.+.+.|+|||++++.+..
T Consensus 147 ~Iv~~~~~~-----~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 147 VIFVTVGVD-----EVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEEECSBBS-----CCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred EEEEcCCHH-----HHH-----HHHHHhcCCCcEEEEEECC
Confidence 999875332 111 5788899999999998753
No 144
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.39 E-value=6.1e-13 Score=115.72 Aligned_cols=105 Identities=19% Similarity=0.107 Sum_probs=88.9
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||+|||+|.++..++++ +..+|+++|+||..++.++++...+.. ..+++++.+|++++...+.||.|+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v----~~~v~~~~~D~~~~~~~~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFPGENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCCCCSCEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEeCcHHHhccccCCCEEE
Confidence 457899999999999999999885 567999999999999999999866542 468999999999997678999999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++.+.. ..+|+..+.+.|++||++.+....
T Consensus 198 ~~~p~~--------~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 198 MGYVVR--------THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp ECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCCCc--------HHHHHHHHHHHcCCCCEEEEEeee
Confidence 875422 468999999999999999876543
No 145
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.39 E-value=1.3e-12 Score=113.58 Aligned_cols=105 Identities=15% Similarity=0.206 Sum_probs=83.5
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
++.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++.... .+++++.+|+.+....++||+|++.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~~fD~i~~~ 191 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKEN------LNISTALYDINAANIQENYDFIVST 191 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCGGGCCCCSCEEEEEEC
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcC------CceEEEEeccccccccCCccEEEEc
Confidence 6789999999999999999984 6799999999999999999875332 3799999999987547899999985
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
..-. .. +.-....+++.+++.|+|||.+++...
T Consensus 192 ~~~~-~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 192 VVFM-FL-NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SSGG-GS-CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cchh-hC-CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 4221 01 111135899999999999999776543
No 146
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.39 E-value=8.9e-13 Score=109.34 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=82.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|+++++ ++++.+|+......++||+|+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~d~~~~~~~~~fD~v~ 107 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLG-----------RPVRTMLFHQLDAIDAYDAVW 107 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHT-----------SCCEECCGGGCCCCSCEEEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcC-----------CceEEeeeccCCCCCcEEEEE
Confidence 456889999999999999999984 6799999999999999999862 566778888776678999999
Q ss_pred EcCCCCCCCCCCCC---cHHHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELE---DPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~---~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+.. ...++. ...+++++++.|+|||.+++.....
T Consensus 108 ~~~-----~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 108 AHA-----CLLHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp ECS-----CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ecC-----chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 742 122222 3589999999999999999986543
No 147
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.39 E-value=1e-12 Score=108.19 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=83.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILV 155 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~ 155 (269)
+. +|||||||+|..+..+++. +.+++++|+++.+++.|++++... ..+++++.+|+.+. ...++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEK------GVKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHH------TCCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhc------CCceEEEEcChhhcCCCcCCccEEEE
Confidence 45 9999999999999999874 679999999999999999987432 23799999999887 45678999997
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
.. .. . +.-....+++.+++.|+|||.+++.....
T Consensus 101 ~~-~~--~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 101 IF-CH--L-PSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp EC-CC--C-CHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred Eh-hc--C-CHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 42 11 1 11123689999999999999999987654
No 148
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.39 E-value=9.2e-13 Score=114.61 Aligned_cols=113 Identities=16% Similarity=0.075 Sum_probs=86.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c-cCCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S-LKDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~-~~~~yD~ 152 (269)
+.++.+|||||||+|..+..+++. +..+++++|+++.+++.|++++.... ...+++++.+|+.+. . ..++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~fD~ 136 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMK----RRFKVFFRAQDSYGRHMDLGKEFDV 136 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSC----CSSEEEEEESCTTTSCCCCSSCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC----CCccEEEEECCccccccCCCCCcCE
Confidence 357889999999999999998875 55699999999999999999874321 125799999999887 3 5678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|++...-+......-....+++.+++.|+|||.+++...+
T Consensus 137 v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 137 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9976321100011111358999999999999999998854
No 149
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.38 E-value=1.3e-12 Score=110.77 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=81.7
Q ss_pred CCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---ccCC
Q 035593 72 LPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---SLKD 148 (269)
Q Consensus 72 ~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---~~~~ 148 (269)
++.+.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|+++ ++++.+|+.++ ...+
T Consensus 36 l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~~~~~~~ 100 (240)
T 3dli_A 36 IPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYLKSLPDK 100 (240)
T ss_dssp GGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHHHTSCTT
T ss_pred HhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh-------------cceeeccHHHHhhhcCCC
Confidence 334557799999999999999999885 66899999999999998864 57778888875 2567
Q ss_pred CeeEEEEcCCCCCCCCCCCC---cHHHHHHHHhhccCCcEEEEEecCC
Q 035593 149 GFSGILVDLFSKGSLLSELE---DPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~---~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+||+|++... ..++. ...+++++++.|||||.+++.....
T Consensus 101 ~fD~i~~~~~-----l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 101 YLDGVMISHF-----VEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp CBSEEEEESC-----GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred CeeEEEECCc-----hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 8999997422 12221 2689999999999999999987654
No 150
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.38 E-value=1.5e-12 Score=116.88 Aligned_cols=119 Identities=16% Similarity=0.176 Sum_probs=88.2
Q ss_pred hHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc
Q 035593 64 TYFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK 143 (269)
Q Consensus 64 ~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~ 143 (269)
.|.+.+.......++.+|||||||+|.++..+++. +..+|++||+++ +++.|++.+.... ..++++++.+|+.+
T Consensus 37 ~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~----l~~~v~~~~~d~~~ 110 (348)
T 2y1w_A 37 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN----LTDRIVVIPGKVEE 110 (348)
T ss_dssp HHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT----CTTTEEEEESCTTT
T ss_pred HHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcC----CCCcEEEEEcchhh
Confidence 35555544434457889999999999999999884 567999999997 8899988764322 13689999999998
Q ss_pred cccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 144 ASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 144 ~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+..+++||+|++...... .. .-...+.+..+++.|+|||++++..
T Consensus 111 ~~~~~~~D~Ivs~~~~~~-~~-~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 111 VSLPEQVDIIISEPMGYM-LF-NERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CCCSSCEEEEEECCCBTT-BT-TTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCCCCceeEEEEeCchhc-CC-hHHHHHHHHHHHhhcCCCeEEEEec
Confidence 754578999998643211 11 1113578888999999999998654
No 151
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.38 E-value=1.8e-12 Score=109.36 Aligned_cols=107 Identities=12% Similarity=-0.008 Sum_probs=86.0
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.+..+|||||||+|.++..+++..|..+|+++|+||.+++.|+++..... ...+++++.+|+.+. ....+||+|
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g----l~~~i~~~~~d~l~~l~~~~~~D~I 88 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG----LKEKIQVRLANGLAAFEETDQVSVI 88 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEECchhhhcccCcCCCEE
Confidence 446779999999999999999997778899999999999999999875433 135899999999765 333479999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
++..... . ...+++..+.+.|+++|.++++-.
T Consensus 89 viaG~Gg-----~-~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 89 TIAGMGG-----R-LIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEEECH-----H-HHHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEcCCCh-----H-HHHHHHHHHHHHhCCCCEEEEECC
Confidence 8642211 1 136899999999999999999775
No 152
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.38 E-value=4.2e-12 Score=101.59 Aligned_cols=101 Identities=15% Similarity=0.189 Sum_probs=80.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|.++..+++.. .+++++|+++.+++.|+++. ++++++.+| .. ...++||+|+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~----------~~v~~~~~d-~~-~~~~~~D~v~ 80 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF----------DSVITLSDP-KE-IPDNSVDFIL 80 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC----------TTSEEESSG-GG-SCTTCEEEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC----------CCcEEEeCC-CC-CCCCceEEEE
Confidence 3467799999999999999999854 39999999999999999982 368999999 22 4567899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+...-.. . -....+++++++.|+|||.+++..+..
T Consensus 81 ~~~~l~~-~---~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 81 FANSFHD-M---DDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp EESCSTT-C---SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred Eccchhc-c---cCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 7532221 1 124689999999999999999876654
No 153
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.38 E-value=1.4e-12 Score=109.42 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=83.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
+.+..+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...........+++++.+|+... ....+||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 5678899999999999999999875 457999999999999999987642110000024799999999865 44678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|+++.... .+++.+.+.|+|||++++.+..
T Consensus 155 i~~~~~~~----------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAP----------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBS----------SCCHHHHHTEEEEEEEEEEESC
T ss_pred EEECCchH----------HHHHHHHHhcCCCcEEEEEEec
Confidence 99875421 2346889999999999998754
No 154
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.37 E-value=2.2e-12 Score=115.54 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=85.5
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||+|.++..+++..|..+|+++|+++.+++.|++++... ...++++.+|+..+. .++||+|++
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~------~~~~~~~~~d~~~~~-~~~fD~Iv~ 267 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN------GVEGEVFASNVFSEV-KGRFDMIIS 267 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT------TCCCEEEECSTTTTC-CSCEEEEEE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh------CCCCEEEEccccccc-cCCeeEEEE
Confidence 3567999999999999999999888889999999999999999987432 234678899987754 568999998
Q ss_pred cCCCCCCCC-CCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLL-SELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~-~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+..-+.... ..-...+++++++++|+|||.+++....
T Consensus 268 ~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 268 NPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 643221110 0011368999999999999999886643
No 155
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.37 E-value=5.2e-13 Score=116.30 Aligned_cols=112 Identities=14% Similarity=0.177 Sum_probs=83.1
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc----cCCCee
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS----LKDGFS 151 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~----~~~~yD 151 (269)
.++.+|||||||+|..+..+++. +.+|+++|+++.+++.|+++...... .....++.+..+|+..+. ..++||
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRK-EPAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTT-SHHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhccc-ccccceeeEeecChhhCccccccCCCeE
Confidence 35789999999999999999984 56999999999999999886411000 000246899999988763 567999
Q ss_pred EEEEc--CCCCCCCCC----CCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 152 GILVD--LFSKGSLLS----ELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 152 ~I~~d--~~~~~~~~~----~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+|++. ...+ .+. .-....++++++++|+|||++++...+
T Consensus 133 ~V~~~g~~l~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 133 AVICLGNSFAH--LPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECTTCGGG--SCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEcChHHhh--cCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 99973 2211 111 011368999999999999999998754
No 156
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.37 E-value=2.9e-12 Score=106.73 Aligned_cols=99 Identities=17% Similarity=0.151 Sum_probs=80.6
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~yD 151 (269)
++.+|||||||+|.++..+++. +.+|+++|+++.+++.|+++. +++++.+|+.+. ....+||
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAG-----------AGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTC-----------SSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhc-----------ccccchhhHHhhcccccccCCCcc
Confidence 5789999999999999999884 679999999999999999871 357778887765 3445699
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+|++...-. +.....+++.+++.|+|||.+++....+
T Consensus 119 ~v~~~~~l~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 119 LICANFALL-----HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp EEEEESCCC-----SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECchhh-----hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 999864322 2335799999999999999999987644
No 157
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.37 E-value=3e-12 Score=116.30 Aligned_cols=113 Identities=14% Similarity=0.177 Sum_probs=86.2
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCcccc---ccCCCCcEEEEEcccccc------
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKL---EKSYPDRLFVYVGNALKA------ 144 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~---~~~~~~rv~~~~~D~~~~------ 144 (269)
+.++.+|||||||+|.++..+++.+ ++.+|+++|+++.+++.|++++..... +....++++++.+|+.+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3467899999999999999999876 688999999999999999988631100 000136899999999875
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
...++||+|++...-.. . -....+++++++.|||||.+++...
T Consensus 161 ~~~~~~fD~V~~~~~l~~-~---~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNL-S---TNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCCTTCEEEEEEESCGGG-C---SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhc-C---CCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 23568999998643221 1 1246899999999999999998643
No 158
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.37 E-value=3.8e-12 Score=103.39 Aligned_cols=103 Identities=19% Similarity=0.225 Sum_probs=82.9
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.++.+|||||||+|.++..+++. +.+++++|+++.+++.|++++. +++++.+|+.+. ...++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~----------~~~~~~~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP----------EARWVVGDLSVDQISETDFDLI 111 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTSCCCCCCEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC----------CCcEEEcccccCCCCCCceeEE
Confidence 346889999999999999999984 6799999999999999998752 489999999887 445789999
Q ss_pred EEcCCCCCCCCCCC---CcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSKGSLLSEL---EDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~~~~~~~l---~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++... ...++ ....+++.+.+.|+|||.+++.....
T Consensus 112 ~~~~~----~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 112 VSAGN----VMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp EECCC----CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EECCc----HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 98521 11111 12689999999999999999977543
No 159
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.37 E-value=7.3e-13 Score=111.84 Aligned_cols=107 Identities=11% Similarity=0.110 Sum_probs=83.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
++.+|||||||+|.++..+++. +.+++++|+++.+++.|++++... ..+++++.+|+.++...++||+|++.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~------~~~~~~~~~d~~~~~~~~~fD~v~~~ 108 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQ------GLKPRLACQDISNLNINRKFDLITCC 108 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHT------TCCCEEECCCGGGCCCSCCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhc------CCCeEEEecccccCCccCCceEEEEc
Confidence 6789999999999999999885 579999999999999999986422 23799999999887434889999974
Q ss_pred C-CCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 157 L-FSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 157 ~-~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
. .-+ ..+..-...++++++++.|+|||.+++.+.+
T Consensus 109 ~~~l~-~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 109 LDSTN-YIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp TTGGG-GCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred Ccccc-ccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 2 111 1111012368999999999999999997754
No 160
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.36 E-value=1.4e-12 Score=116.19 Aligned_cols=118 Identities=18% Similarity=0.198 Sum_probs=86.8
Q ss_pred hHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc
Q 035593 64 TYFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK 143 (269)
Q Consensus 64 ~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~ 143 (269)
.|.+.+.....+.++.+|||||||+|.++..+++. +..+|++||++ .+++.|++.+....+ .++++++.+|+.+
T Consensus 25 ~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~----~~~i~~~~~d~~~ 98 (328)
T 1g6q_1 25 SYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGF----SDKITLLRGKLED 98 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTC----TTTEEEEESCTTT
T ss_pred HHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCC----CCCEEEEECchhh
Confidence 35555532222346789999999999999999884 55699999999 589999988643321 3579999999998
Q ss_pred c-ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 144 A-SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 144 ~-~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
+ ...++||+|+++..... ....-....++..+.+.|+|||+++.
T Consensus 99 ~~~~~~~~D~Ivs~~~~~~-l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWMGYF-LLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCCSSSCEEEEEECCCBTT-BSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCCCCcccEEEEeCchhh-cccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 8 44478999998743221 11122245789999999999999973
No 161
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.36 E-value=2.4e-12 Score=108.90 Aligned_cols=104 Identities=23% Similarity=0.300 Sum_probs=81.3
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.+..+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++.... -++++++.+|+..- ....+||+
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~ 161 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG-----VKNVHVILGDGSKGFPPKAPYDV 161 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC-----CCCcEEEECCcccCCCCCCCccE
Confidence 355788999999999999999999776 899999999999999999864322 23599999998433 44456999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
|+++.... + +.+.+.+.|+|||++++.+...
T Consensus 162 Ii~~~~~~-----~-----~~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 162 IIVTAGAP-----K-----IPEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp EEECSBBS-----S-----CCHHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHH-----H-----HHHHHHHhcCCCcEEEEEEecC
Confidence 99864322 1 1247889999999999988654
No 162
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.36 E-value=2.2e-12 Score=107.62 Aligned_cols=113 Identities=16% Similarity=0.118 Sum_probs=79.0
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
..++.+|||||||+|.++..+++.+|+.+|+++|+++.+++.+.++..... ....-++++++++|+.++ ...+. |.|
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~-~~~~~~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKP-AKGGLPNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCG-GGTCCTTEEEEECCSTTCCSCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhh-hhcCCCceEEEecchhhCCCCCCC-CEE
Confidence 346789999999999999999999999999999999998885332221000 000134799999999987 33344 777
Q ss_pred EEcCCCCCCCC-CC-CCcHHHHHHHHhhccCCcEEEEEe
Q 035593 154 LVDLFSKGSLL-SE-LEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 154 ~~d~~~~~~~~-~~-l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
++...... .. .+ -...++++++++.|||||.+++..
T Consensus 103 ~~~~~~~~-~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 103 HVLMPWGS-LLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEESCCHH-HHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEccchh-hhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 64321110 00 00 012689999999999999999865
No 163
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.36 E-value=2.2e-12 Score=108.31 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=83.7
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHC-----CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLY-----PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~-----p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---- 144 (269)
.+.+..+|||||||+|.++..+++.. |..+|+++|+++.+++.|++++..........++++++.+|+.+.
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 45678899999999999999999875 457999999999999999998642210000025799999999874
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
...++||+|+++...+ .+++.+.+.|+|||++++.+.
T Consensus 157 ~~~~~~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASAS----------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBS----------SCCHHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEEc
Confidence 3356899999875432 234788999999999999875
No 164
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.35 E-value=2.4e-12 Score=110.90 Aligned_cols=147 Identities=16% Similarity=0.167 Sum_probs=99.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHH-------CCC-----ceEEEEECCh---HH-----------HHHHHHhcCc-cc----
Q 035593 77 PPGPIGILGFGAGSAARLILDL-------YPE-----AVIHGWELDP---SV-----------IKVAREFFAL-EK---- 125 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~-------~p~-----~~v~~vEidp---~~-----------~~~a~~~~~~-~~---- 125 (269)
++.+|||||+|+|..+..+++. .|+ .+++++|.+| +. .+.|++.+.. +.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999999887654 563 5999999987 33 3355554321 00
Q ss_pred cc--cCC--CCcEEEEEcccccc--ccC----CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCc
Q 035593 126 LE--KSY--PDRLFVYVGNALKA--SLK----DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCV 195 (269)
Q Consensus 126 ~~--~~~--~~rv~~~~~D~~~~--~~~----~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~ 195 (269)
.. ... ..+++++.+|+++. ... ..||+|++|++++. ..+.+++.++|+.++++|+|||+|++ ++..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~-~~p~lw~~~~l~~l~~~L~pGG~l~t--ysaa- 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA-KNPDMWTQNLFNAMARLARPGGTLAT--FTSA- 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT-TCGGGCCHHHHHHHHHHEEEEEEEEE--SCCB-
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc-cChhhcCHHHHHHHHHHcCCCcEEEE--EeCC-
Confidence 00 011 24688999999985 222 27999999998763 45578899999999999999999996 3331
Q ss_pred cccccccchhHHHHHHHHHHHHH-hcCceEEEEcCCCCceEEEEecCC
Q 035593 196 EAEDSRRDGKVVMEATLKAMHKV-FGKKLYVLSLGNRKDDSLIALTGE 242 (269)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~~~~n~v~~~~~~~ 242 (269)
. .+.+.|.++ | .+...+.......++.+....
T Consensus 216 ---------~----~vrr~L~~aGF--~v~~~~g~~~kr~m~~a~~~~ 248 (257)
T 2qy6_A 216 ---------G----FVRRGLQEAGF--TMQKRKGFGRKREMLCGVMEQ 248 (257)
T ss_dssp ---------H----HHHHHHHHHTE--EEEEECCSTTCCCEEEEEEC-
T ss_pred ---------H----HHHHHHHHCCC--EEEeCCCCCCCCceEEEEecC
Confidence 1 344556665 6 355444444455677776544
No 165
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.35 E-value=5.6e-13 Score=112.58 Aligned_cols=108 Identities=10% Similarity=-0.041 Sum_probs=79.1
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECC-hHHHHHH---HHhcCccccccCCCCcEEEEEccccccc--cCCC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELD-PSVIKVA---REFFALEKLEKSYPDRLFVYVGNALKAS--LKDG 149 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEid-p~~~~~a---~~~~~~~~~~~~~~~rv~~~~~D~~~~~--~~~~ 149 (269)
.++.+|||||||+|.++..+++..++.+|++||++ +.|++.| +++..... -++++++.+|+..+. ....
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-----~~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG-----LSNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-----CSSEEEECCBTTBCCGGGTTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-----CCCeEEEEcCHHHhhhhccCe
Confidence 36789999999999999999977789999999999 7777776 66543221 357999999999872 2356
Q ss_pred eeEEEEcCCCCCCCC-CCCCcHHHHHHHHhhccCCcEEEE
Q 035593 150 FSGILVDLFSKGSLL-SELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 150 yD~I~~d~~~~~~~~-~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
+|.|.+....+.... ......++++++++.|||||.+++
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 777766432110000 001235799999999999999988
No 166
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.35 E-value=1.6e-12 Score=109.29 Aligned_cols=90 Identities=18% Similarity=0.154 Sum_probs=76.9
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--cc-CCCeeE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SL-KDGFSG 152 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~-~~~yD~ 152 (269)
.++.+|||||||+|.++..+++. +.+|+++|+++.+++.|+++. ++++++++|+.+. .. .++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANA----------PHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC----------TTSEEEECCSCSSCCTTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC----------CCceEEEcchhhccCCcCCCCEEE
Confidence 46789999999999999999985 679999999999999999882 3689999999654 33 679999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEE
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIM 187 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~ 187 (269)
|++.. ....+++++++.|+|||.++
T Consensus 115 v~~~~----------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 115 IVSRR----------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEES----------CCSGGGGGHHHHEEEEEEEE
T ss_pred EEeCC----------CHHHHHHHHHHHcCCCcEEE
Confidence 99861 13578899999999999998
No 167
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.35 E-value=3.3e-12 Score=107.95 Aligned_cols=108 Identities=10% Similarity=-0.002 Sum_probs=87.0
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.+..+|||||||+|.++..+++..|..+|+++|+||.+++.|++++...+ ...+++++.+|+.+. ...++||+|
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g----l~~~I~~~~gD~l~~~~~~~~~D~I 94 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG----LTSKIDVRLANGLSAFEEADNIDTI 94 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEECchhhccccccccCEE
Confidence 446789999999999999999997777899999999999999999875443 135899999999987 444479998
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++..... . ...+++....+.|+++|.|+++-..
T Consensus 95 viaGmGg-----~-lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 95 TICGMGG-----R-LIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp EEEEECH-----H-HHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EEeCCch-----H-HHHHHHHHHHHHhCcCCEEEEECCC
Confidence 8642221 1 1358899999999999999998753
No 168
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.35 E-value=1e-11 Score=104.39 Aligned_cols=101 Identities=15% Similarity=0.247 Sum_probs=81.5
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++++... .+++++.+|+.+. ...++||+
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~fD~ 137 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY-------NNIKLILGDGTLGYEEEKPYDR 137 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC-------SSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc-------CCeEEEECCcccccccCCCccE
Confidence 45578899999999999999999864 79999999999999999987532 2799999999874 44678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
|+++...+ ++ .+.+.+.|+|||++++.....
T Consensus 138 v~~~~~~~-----~~-----~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 138 VVVWATAP-----TL-----LCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEESSBBS-----SC-----CHHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHH-----HH-----HHHHHHHcCCCcEEEEEEcCC
Confidence 99864322 22 146889999999999987543
No 169
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.35 E-value=4.3e-12 Score=110.25 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=84.8
Q ss_pred CCCcEEEEcCcc---cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc--------
Q 035593 77 PPGPIGILGFGA---GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS-------- 145 (269)
Q Consensus 77 ~~~~VL~iG~G~---G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~-------- 145 (269)
+..+|||||||+ |.++..+.+..|+.+|++||+||.|++.|++.+.. .++++++.+|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~~~~~D~~~~~~~~~~~~~ 149 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-------DPNTAVFTADVRDPEYILNHPDV 149 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------CTTEEEEECCTTCHHHHHHSHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------CCCeEEEEeeCCCchhhhccchh
Confidence 357999999999 99888887878999999999999999999998742 358999999997631
Q ss_pred ----cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 146 ----LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 146 ----~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
...+||+|++...-+ ..+.. ....++++++++|+|||.|++.....
T Consensus 150 ~~~~d~~~~d~v~~~~vlh-~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 150 RRMIDFSRPAAIMLVGMLH-YLSPD-VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHCCTTSCCEEEETTTGG-GSCTT-THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hccCCCCCCEEEEEechhh-hCCcH-HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 114799998753222 11222 24689999999999999999877543
No 170
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.35 E-value=3.7e-12 Score=104.83 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=90.8
Q ss_pred CCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc------
Q 035593 72 LPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS------ 145 (269)
Q Consensus 72 ~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~------ 145 (269)
+..+.+..+|||||||+|.++..++++ +.+|++||++|.. . .++++++++|+.+..
T Consensus 20 ~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~--------~--------~~~v~~~~~D~~~~~~~~~~~ 81 (191)
T 3dou_A 20 YRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME--------E--------IAGVRFIRCDIFKETIFDDID 81 (191)
T ss_dssp HCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC--------C--------CTTCEEEECCTTSSSHHHHHH
T ss_pred cCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc--------c--------CCCeEEEEccccCHHHHHHHH
Confidence 334567899999999999999999885 7899999999841 1 247999999998751
Q ss_pred --cC----CCeeEEEEcCCCCCCCCC---CC----CcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHH
Q 035593 146 --LK----DGFSGILVDLFSKGSLLS---EL----EDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATL 212 (269)
Q Consensus 146 --~~----~~yD~I~~d~~~~~~~~~---~l----~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (269)
.. ++||+|++|+.....-.. +. .....++.+.+.|+|||.|++-++... ....+.
T Consensus 82 ~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~------------~~~~~~ 149 (191)
T 3dou_A 82 RALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD------------MTNDFI 149 (191)
T ss_dssp HHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST------------HHHHHH
T ss_pred HHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC------------CHHHHH
Confidence 11 499999999743211100 00 014678889999999999999887542 245677
Q ss_pred HHHHHHhcCceEEEE
Q 035593 213 KAMHKVFGKKLYVLS 227 (269)
Q Consensus 213 ~~l~~~F~~~v~~~~ 227 (269)
..++..|. .+...+
T Consensus 150 ~~l~~~F~-~v~~~k 163 (191)
T 3dou_A 150 AIWRKNFS-SYKISK 163 (191)
T ss_dssp HHHGGGEE-EEEEEC
T ss_pred HHHHHhcC-EEEEEC
Confidence 88888895 566653
No 171
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.35 E-value=4.8e-12 Score=114.14 Aligned_cols=107 Identities=17% Similarity=0.185 Sum_probs=84.1
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc--cCCCeeEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS--LKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~--~~~~yD~I~ 154 (269)
.+.+|||||||+|..+..+++.+|+.+++++|+ |.+++.|++++...+ ..++++++.+|+.+.. .++.||+|+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~p~~~D~v~ 253 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS----GSERIHGHGANLLDRDVPFPTGFDAVW 253 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT----TGGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC----cccceEEEEccccccCCCCCCCcCEEE
Confidence 478999999999999999999999999999999 999999999875322 1358999999998752 347899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+...-+. .+. -....+++++++.|+|||.+++.-
T Consensus 254 ~~~vlh~-~~~-~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 254 MSQFLDC-FSE-EEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EESCSTT-SCH-HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred Eechhhh-CCH-HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 7432221 110 012478999999999999998754
No 172
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.34 E-value=1.3e-11 Score=106.41 Aligned_cols=111 Identities=13% Similarity=0.111 Sum_probs=79.0
Q ss_pred HHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc--
Q 035593 66 FDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK-- 143 (269)
Q Consensus 66 ~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~-- 143 (269)
.+.+.....+.+..+|||||||+|.++..++++ +.+|++||+|+.|++.|++++... .++.-..|...
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~--------~v~~~~~~~~~~~ 103 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR--------CVTIDLLDITAEI 103 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS--------CCEEEECCTTSCC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc--------cceeeeeeccccc
Confidence 334443434567889999999999999999984 679999999999999999987421 12322223222
Q ss_pred -cccCCCeeEEEEcCCCCCCCCCCCC---cHHHHHHHHhhccCCcEEEEEecC
Q 035593 144 -ASLKDGFSGILVDLFSKGSLLSELE---DPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 144 -~~~~~~yD~I~~d~~~~~~~~~~l~---~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
....++||+|+++..- .++. ...+++.+.+.| |||++++.+..
T Consensus 104 ~~~~~~~fD~Vv~~~~l-----~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 104 PKELAGHFDFVLNDRLI-----NRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CGGGTTCCSEEEEESCG-----GGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccCCCccEEEEhhhh-----HhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 1225689999986421 1221 246899999999 99999998753
No 173
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.34 E-value=4.8e-12 Score=104.01 Aligned_cols=124 Identities=15% Similarity=0.061 Sum_probs=87.7
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCC--CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc------
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYP--EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS------ 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p--~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~------ 145 (269)
.+.+..+|||||||+|.++..++++++ +.+|+++|+++.. . .++++++++|+.+..
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~--------~~~v~~~~~d~~~~~~~~~~~ 82 (201)
T 2plw_A 19 FLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------P--------IPNVYFIQGEIGKDNMNNIKN 82 (201)
T ss_dssp CCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------C--------CTTCEEEECCTTTTSSCCC--
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------C--------CCCceEEEccccchhhhhhcc
Confidence 355778999999999999999999887 6899999999931 1 246899999987653
Q ss_pred --------------------cCCCeeEEEEcCCCCCCCC---CCCC----cHHHHHHHHhhccCCcEEEEEecCCCcccc
Q 035593 146 --------------------LKDGFSGILVDLFSKGSLL---SELE----DPNTWEKLRQCLRKGGRIMVNVGGSCVEAE 198 (269)
Q Consensus 146 --------------------~~~~yD~I~~d~~~~~~~~---~~l~----~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~ 198 (269)
...+||+|+++...+..-. .+.. ...+++.+.+.|+|||.+++.++...
T Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~---- 158 (201)
T 2plw_A 83 INYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS---- 158 (201)
T ss_dssp ---------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST----
T ss_pred ccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC----
Confidence 3468999999754221100 0000 12478899999999999999776532
Q ss_pred ccccchhHHHHHHHHHHHHHhcCceEEE
Q 035593 199 DSRRDGKVVMEATLKAMHKVFGKKLYVL 226 (269)
Q Consensus 199 ~~~~~~~~~~~~~~~~l~~~F~~~v~~~ 226 (269)
....+...++..|. .+..+
T Consensus 159 --------~~~~l~~~l~~~f~-~v~~~ 177 (201)
T 2plw_A 159 --------QTNNLKTYLKGMFQ-LVHTT 177 (201)
T ss_dssp --------THHHHHHHHHTTEE-EEEEC
T ss_pred --------CHHHHHHHHHHHHh-eEEEE
Confidence 13456667777775 44443
No 174
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.34 E-value=4.2e-12 Score=108.17 Aligned_cols=107 Identities=13% Similarity=0.067 Sum_probs=86.0
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.+..+|||||||+|.++..+++..|..+|+++|+||.+++.|++++...+ ...+++++.+|+.+. ...++||+|
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g----l~~~I~v~~gD~l~~~~~~~~~D~I 94 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG----LTEQIDVRKGNGLAVIEKKDAIDTI 94 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEecchhhccCccccccEE
Confidence 446789999999999999999997777899999999999999999875433 135899999999887 333469999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
++..... . ...+++....+.|+++|.|+++-.
T Consensus 95 viagmGg-----~-lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 95 VIAGMGG-----T-LIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp EEEEECH-----H-HHHHHHHHTGGGGTTCCEEEEEES
T ss_pred EEeCCch-----H-HHHHHHHHHHHHhCCCCEEEEEcC
Confidence 8632211 1 135889999999999999999874
No 175
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.34 E-value=5.2e-12 Score=104.59 Aligned_cols=98 Identities=18% Similarity=0.127 Sum_probs=80.1
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
++.+|||||||+|..+..+ +. +++++|+++.+++.|++++ ++++++.+|+.+. ...++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA----------PEATWVRAWGEALPFPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC----------TTSEEECCCTTSCCSCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcccccCCCCCCcEEEEE
Confidence 7889999999999999876 45 9999999999999999986 2588999999887 4567899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+...-. ..+ ...++++++++.|+|||.+++.....
T Consensus 101 ~~~~l~-~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 101 LFTTLE-FVE---DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EESCTT-TCS---CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EcChhh-hcC---CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 753211 111 24689999999999999999987654
No 176
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.33 E-value=4.1e-12 Score=113.43 Aligned_cols=110 Identities=19% Similarity=0.045 Sum_probs=82.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----cCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----LKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~~~~yD 151 (269)
++.+|||+|||+|.++..+++. +.+|++||+|+.+++.|++++..+.. .+.+++++++|+.++ . ..++||
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl---~~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGL---EQAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTC---TTSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECcHHHHHHHHHhcCCCce
Confidence 5679999999999999999983 45999999999999999998754331 122599999999987 2 157899
Q ss_pred EEEEcCCCCCCCC-CCC-----CcHHHHHHHHhhccCCcEEEEEec
Q 035593 152 GILVDLFSKGSLL-SEL-----EDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 152 ~I~~d~~~~~~~~-~~l-----~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+|++|.+.-.... ..+ ...++++.+.+.|+|||++++...
T Consensus 228 ~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 228 IILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp EEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred EEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 9999864211000 000 125789999999999999666543
No 177
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.33 E-value=5.6e-12 Score=108.46 Aligned_cols=97 Identities=19% Similarity=0.287 Sum_probs=81.6
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
.++.+|||||||+|.++..+++..++.+|+++|+++.+++.|++.. ++++++.+|+.+. ...++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHRLPFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTSCSBCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchhhCCCCCCceeEEE
Confidence 4678999999999999999999777889999999999999999874 3578999999877 4567899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+... ..+++++.+.|+|||.+++.....
T Consensus 154 ~~~~-----------~~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 154 RIYA-----------PCKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp EESC-----------CCCHHHHHHHEEEEEEEEEEEECT
T ss_pred EeCC-----------hhhHHHHHHhcCCCcEEEEEEcCH
Confidence 6321 235899999999999999887654
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.32 E-value=5.9e-12 Score=105.86 Aligned_cols=109 Identities=20% Similarity=0.282 Sum_probs=82.9
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCC------CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-cc
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYP------EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SL 146 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p------~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~ 146 (269)
.+.+..+|||||||+|.++..+++..+ ..+|+++|+++.+++.|++++..........++++++.+|+.+. ..
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc
Confidence 356788999999999999999988654 26999999999999999988642110000014799999999875 44
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.++||+|+++.... .+.+.+.+.|+|||++++.+..
T Consensus 161 ~~~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 161 NAPYNAIHVGAAAP----------DTPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GCSEEEEEECSCBS----------SCCHHHHHTEEEEEEEEEEESC
T ss_pred CCCccEEEECCchH----------HHHHHHHHHhcCCCEEEEEEec
Confidence 47899999865422 1237889999999999999864
No 179
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.32 E-value=2.6e-12 Score=113.31 Aligned_cols=115 Identities=10% Similarity=-0.022 Sum_probs=83.3
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccc--cCCCCcEEEEEccccccc-------c
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLE--KSYPDRLFVYVGNALKAS-------L 146 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~--~~~~~rv~~~~~D~~~~~-------~ 146 (269)
.++.+|||||||+|..+..+++ .+..+++++|+++.+++.|++++...... .....+++++++|+.+.. .
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 3678999999999999999987 46789999999999999999886321000 001247999999998752 2
Q ss_pred CCCeeEEEEcCCCCCCCCCC-CCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 147 KDGFSGILVDLFSKGSLLSE-LEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~-l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.++||+|++...-+. ...+ -....+++++++.|+|||.+++...+
T Consensus 112 ~~~fD~V~~~~~l~~-~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 112 QMCFDICSCQFVCHY-SFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TCCEEEEEEETCGGG-GGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEecchhh-ccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 458999997532110 1011 11258999999999999999998854
No 180
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=3.5e-12 Score=109.55 Aligned_cols=100 Identities=13% Similarity=0.141 Sum_probs=80.6
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
..++.+|||||||+|..+..+++ ++.+|+++|+++.+++.|++.. +++++++|+.++ ...++||+|
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP-----------QVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT-----------TEEEECCCTTSCCSCTTCBSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc-----------CCEEEECchhhCCCCCCCEeEE
Confidence 45788999999999999999987 7889999999999998876542 699999999887 456899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++...-. .. -....+++++++.|| ||.+++..+.
T Consensus 99 ~~~~~l~-~~---~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 99 ISILAIH-HF---SHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp EEESCGG-GC---SSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred EEcchHh-hc---cCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 9753211 11 124689999999999 9977766554
No 181
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.32 E-value=5.2e-12 Score=114.75 Aligned_cols=118 Identities=16% Similarity=0.065 Sum_probs=84.3
Q ss_pred HHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCc-----cccccCCCCcEEEEEcc
Q 035593 66 FDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFAL-----EKLEKSYPDRLFVYVGN 140 (269)
Q Consensus 66 ~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~-----~~~~~~~~~rv~~~~~D 140 (269)
...++....+.+..+|||||||+|.++..++...+..+|++||+++.++++|++.... ..++ ....+++++++|
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G-l~~~rVefi~GD 240 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG-KKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT-BCCCEEEEEECC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC-CCCCCeEEEECc
Confidence 3334333345678899999999999999999876655799999999999999864210 0000 012589999999
Q ss_pred cccc-ccC--CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 141 ALKA-SLK--DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 141 ~~~~-~~~--~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+.+. ... ..+|+|+++.+- ..+ .....++++.+.|||||.|++.
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~---F~p--dl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFA---FGP--EVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTT---CCH--HHHHHHHHHHTTSCTTCEEEES
T ss_pred ccCCccccccCCccEEEEcccc---cCc--hHHHHHHHHHHcCCCCcEEEEe
Confidence 9886 211 479999985331 111 1356788899999999999875
No 182
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.32 E-value=1.8e-12 Score=105.96 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=76.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.++.+|||||||+|.++..++...|+++|+++|+|+.|++++++++...+ ...++++ .|......+++||+|+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g----~~~~v~~--~d~~~~~~~~~~DvVL 120 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK----TTIKYRF--LNKESDVYKGTYDVVF 120 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC----CSSEEEE--ECCHHHHTTSEEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC----CCccEEE--ecccccCCCCCcChhh
Confidence 356899999999999999999988889999999999999999999975332 0124555 6665446678899998
Q ss_pred EcCCCCCCCCCCCC-cHHHHHHHHhhccCCcEEEE
Q 035593 155 VDLFSKGSLLSELE-DPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 155 ~d~~~~~~~~~~l~-~~e~~~~~~~~L~pgG~l~~ 188 (269)
.-- ..+.+. .+..+.++.+.|+|||+++-
T Consensus 121 a~k-----~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 121 LLK-----MLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp EET-----CHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred Hhh-----HHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 631 111220 11344489999999998864
No 183
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.31 E-value=4.9e-12 Score=115.08 Aligned_cols=114 Identities=11% Similarity=-0.048 Sum_probs=85.9
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCC-cEEEEEcccccc-c----cCCC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPD-RLFVYVGNALKA-S----LKDG 149 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~-rv~~~~~D~~~~-~----~~~~ 149 (269)
.+.++|||+|||+|.++..+++. ...+|++||+++.+++.|++++..+.. .+ +++++.+|+.++ . ...+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~----~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHL----DMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTC----CCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC----CccceEEEECCHHHHHHHHHHhCCC
Confidence 56789999999999999999873 234899999999999999999865431 23 799999999886 1 2468
Q ss_pred eeEEEEcCCCCCCCCCCCC-----cHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 150 FSGILVDLFSKGSLLSELE-----DPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~-----~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
||+|++|.+.......... ..++++.+.+.|+|||++++.+....
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 9999998654210001111 13567788999999999999887653
No 184
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.31 E-value=2.5e-11 Score=97.78 Aligned_cols=99 Identities=8% Similarity=-0.004 Sum_probs=75.8
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||+|||+|.++..+++.. +|+++|+|+.+++. . ++++++++|+.+....++||+|++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------~-------~~~~~~~~d~~~~~~~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------H-------RGGNLVRADLLCSINQESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------C-------SSSCEEECSTTTTBCGGGCSEEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------c-------cCCeEEECChhhhcccCCCCEEEE
Confidence 357799999999999999998854 99999999999987 1 358999999987644579999998
Q ss_pred cCCCCCCCCC-----CCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLLS-----ELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~~-----~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+..-...... .....++++.+.+.| |||.+++....
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 6432211000 011257899999999 99999887754
No 185
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.31 E-value=8.5e-13 Score=112.72 Aligned_cols=108 Identities=18% Similarity=0.119 Sum_probs=80.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHH--CCCceEEEEECChHHHHHHHHhcCcc---ccccCCCCc------------------
Q 035593 77 PPGPIGILGFGAGSAARLILDL--YPEAVIHGWELDPSVIKVAREFFALE---KLEKSYPDR------------------ 133 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~--~p~~~v~~vEidp~~~~~a~~~~~~~---~~~~~~~~r------------------ 133 (269)
++.+|||+|||+|.++..+++. .++.+|+++|+|+.+++.|+++.... .. ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 126 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL----TARELERREQSERFGKPSYLE 126 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH----HHHHHHHHHHHHHHCCHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc----cccchhhhhhhhhcccccchh
Confidence 5679999999999999999987 56789999999999999999875322 10 011
Q ss_pred -------EE-------------EEEccccccc------cCCCeeEEEEcCCCCCCCC-CC----CCcHHHHHHHHhhccC
Q 035593 134 -------LF-------------VYVGNALKAS------LKDGFSGILVDLFSKGSLL-SE----LEDPNTWEKLRQCLRK 182 (269)
Q Consensus 134 -------v~-------------~~~~D~~~~~------~~~~yD~I~~d~~~~~~~~-~~----l~~~e~~~~~~~~L~p 182 (269)
++ ++++|+.+.. ...+||+|+++..-..... .+ -....+++.+.+.|+|
T Consensus 127 ~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 206 (250)
T 1o9g_A 127 AAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA 206 (250)
T ss_dssp HHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT
T ss_pred hhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC
Confidence 55 9999988763 3458999998742110000 00 1124899999999999
Q ss_pred CcEEEE
Q 035593 183 GGRIMV 188 (269)
Q Consensus 183 gG~l~~ 188 (269)
||++++
T Consensus 207 gG~l~~ 212 (250)
T 1o9g_A 207 HAVIAV 212 (250)
T ss_dssp TCEEEE
T ss_pred CcEEEE
Confidence 999998
No 186
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.31 E-value=6.2e-12 Score=110.77 Aligned_cols=114 Identities=11% Similarity=0.037 Sum_probs=76.6
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCcccccc-CCCCcEEEEEcccc------cc---cc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEK-SYPDRLFVYVGNAL------KA---SL 146 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~-~~~~rv~~~~~D~~------~~---~~ 146 (269)
++.+|||||||+|..+..+++. ...+|+++|+++.|++.|+++........ ....+++++++|+. ++ ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3679999999999866655542 45799999999999999998763211000 00013677788772 22 23
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.++||+|++-..-+ ..........++++++++|||||++++...+
T Consensus 127 ~~~FD~V~~~~~lh-y~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIH-YSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGG-GTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHH-HhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 56899998643211 0111112368999999999999999988754
No 187
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.30 E-value=2e-11 Score=110.09 Aligned_cols=105 Identities=22% Similarity=0.137 Sum_probs=83.0
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++++.... ..++++++.+|+.+.. +..||+|++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~-~~~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG----LADRVTVAEGDFFKPL-PVTADVVLL 254 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTSCC-SCCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC----CCCceEEEeCCCCCcC-CCCCCEEEE
Confidence 4578999999999999999999999999999999 999999999864221 1358999999987632 234999997
Q ss_pred cCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEec
Q 035593 156 DLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 156 d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
...-+ ++.. ..+++++++.|+|||.+++...
T Consensus 255 ~~vl~-----~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 255 SFVLL-----NWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ESCGG-----GSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ecccc-----CCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 53211 1222 3799999999999998887654
No 188
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.30 E-value=9.7e-12 Score=99.12 Aligned_cols=124 Identities=17% Similarity=0.158 Sum_probs=89.6
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--------
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-------- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-------- 144 (269)
.+.+..+|||+|||+|.++..+++.+ ++.+++++|+++ +++. ++++++.+|+.+.
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEEEEESCTTSHHHHHHHHH
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEEEEEcccccchhhhhhhc
Confidence 35578899999999999999999874 578999999999 6422 3689999999875
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCC-------cHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHH
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELE-------DPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMH 216 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~-------~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 216 (269)
...++||+|+++............ ...+++.+.+.|+|||.+++..+... ....+...++
T Consensus 83 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~------------~~~~~~~~~~ 150 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE------------GFDEYLREIR 150 (180)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST------------THHHHHHHHH
T ss_pred cCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC------------cHHHHHHHHH
Confidence 234689999987543211000000 15899999999999999999776542 1345667777
Q ss_pred HHhcCceEEE
Q 035593 217 KVFGKKLYVL 226 (269)
Q Consensus 217 ~~F~~~v~~~ 226 (269)
+.|. .+...
T Consensus 151 ~~~~-~~~~~ 159 (180)
T 1ej0_A 151 SLFT-KVKVR 159 (180)
T ss_dssp HHEE-EEEEE
T ss_pred Hhhh-hEEee
Confidence 7784 45444
No 189
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.30 E-value=1.6e-11 Score=109.15 Aligned_cols=104 Identities=18% Similarity=0.209 Sum_probs=83.1
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
+..+|||||||+|..+..+++.+|+.+++++|+ |.+++.|++++.... ..++++++.+|+.+..+ ..||+|++-
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~p-~~~D~v~~~ 242 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG----LSGRAQVVVGSFFDPLP-AGAGGYVLS 242 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTSCCC-CSCSEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC----cCcCeEEecCCCCCCCC-CCCcEEEEe
Confidence 468999999999999999999999999999999 999999998864221 13689999999974322 289999974
Q ss_pred CCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEec
Q 035593 157 LFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 157 ~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
.. ..++.. .++++++++.|+|||.+++...
T Consensus 243 ~v-----lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 243 AV-----LHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp SC-----GGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hh-----hccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 22 112222 5899999999999999988654
No 190
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.29 E-value=6.9e-12 Score=107.59 Aligned_cols=101 Identities=18% Similarity=0.146 Sum_probs=80.2
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILV 155 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~ 155 (269)
++.+|||||||+|.++..+++. +.+++++|+++.+++.|+++.. . .++.+|+.+. ...++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~---------~--~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV---------K--NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC---------S--CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC---------C--CEEECcHHHCCCCCCCEEEEEE
Confidence 6789999999999999999884 6799999999999999998853 1 2788998877 45678999997
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
..... ...+ ....+++++++.|+|||.+++...+.
T Consensus 121 ~~~~~-~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 121 LGDVL-SYVE--NKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp CSSHH-HHCS--CHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred cchhh-hccc--cHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 42100 0111 15789999999999999999987653
No 191
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.29 E-value=1.7e-11 Score=113.83 Aligned_cols=114 Identities=14% Similarity=0.074 Sum_probs=89.6
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCC-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc--cCCCee
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS--LKDGFS 151 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~--~~~~yD 151 (269)
..++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.+++++.... -. ++++.+|+.++. ..++||
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-----~~-v~~~~~Da~~l~~~~~~~FD 172 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-----AP-LAVTQAPPRALAEAFGTYFH 172 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-----CC-CEEECSCHHHHHHHHCSCEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----Ce-EEEEECCHHHhhhhccccCC
Confidence 346889999999999999999988764 799999999999999999874322 23 899999998872 567899
Q ss_pred EEEEcCCCCC-CC---CCCC--------------CcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 152 GILVDLFSKG-SL---LSEL--------------EDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 152 ~I~~d~~~~~-~~---~~~l--------------~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
+|++|++-.. ++ .+.. ...++++.+.+.|||||+|++...+..
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 9999975431 11 0111 016789999999999999998876654
No 192
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.29 E-value=9.6e-12 Score=111.13 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=84.8
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.+..+|||+|||+|.++.. ++ ...+|+++|+||.+++.|++++..+.. .++++++.+|+.++. ++||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l----~~~v~~~~~D~~~~~--~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKL----EHKIIPILSDVREVD--VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCGGGCC--CCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECChHHhc--CCCcEEEE
Confidence 4678999999999999999 76 577999999999999999999765431 257999999999876 78999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
|.+.. ..++++.+.+.|+|||++++..++.
T Consensus 265 dpP~~--------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 265 NLPKF--------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CCTTT--------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CCcHh--------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 75322 3489999999999999998876654
No 193
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.29 E-value=2.9e-11 Score=110.22 Aligned_cols=112 Identities=17% Similarity=0.046 Sum_probs=82.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSG 152 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~ 152 (269)
+.++++|||+|||+|..+..+++. +.+|++||+|+.+++.|++++..+.. ..++.++|+.++ ...+.||+
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~------~~~~~~~D~~~~l~~~~~~fD~ 283 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGL------RVDIRHGEALPTLRGLEGPFHH 283 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTC------CCEEEESCHHHHHHTCCCCEEE
T ss_pred hcCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCC------CCcEEEccHHHHHHHhcCCCCE
Confidence 346889999999999999999984 55699999999999999999865431 135669999987 22345999
Q ss_pred EEEcCCCCCCCCCCC-----CcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 153 ILVDLFSKGSLLSEL-----EDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 153 I~~d~~~~~~~~~~l-----~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
|++|++.-....... ...++++.+.+.|+|||++++...+..
T Consensus 284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 284 VLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 999854311000000 114788899999999999987665543
No 194
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.29 E-value=1.2e-11 Score=110.59 Aligned_cols=106 Identities=15% Similarity=0.197 Sum_probs=85.3
Q ss_pred CC-CCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc--cCCCeeE
Q 035593 76 LP-PGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS--LKDGFSG 152 (269)
Q Consensus 76 ~~-~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~--~~~~yD~ 152 (269)
.+ +.+|||||||+|.++..+++++|+.+++++|+ |.+++.|++++...+ ..++++++.+|+.+.. .++.||+
T Consensus 177 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~D~ 251 (352)
T 3mcz_A 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD----LGGRVEFFEKNLLDARNFEGGAADV 251 (352)
T ss_dssp GTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT----CGGGEEEEECCTTCGGGGTTCCEEE
T ss_pred cCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC----CCCceEEEeCCcccCcccCCCCccE
Confidence 34 78999999999999999999999999999999 899999998864222 1358999999998774 6677999
Q ss_pred EEEcCCCCCCCCCCCC---cHHHHHHHHhhccCCcEEEEEec
Q 035593 153 ILVDLFSKGSLLSELE---DPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~---~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|++...- .++. ...+++++++.|+|||.+++...
T Consensus 252 v~~~~vl-----h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 252 VMLNDCL-----HYFDAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp EEEESCG-----GGSCHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEeccc-----ccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9974221 1222 25899999999999999988643
No 195
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.28 E-value=1.6e-11 Score=111.45 Aligned_cols=111 Identities=13% Similarity=-0.020 Sum_probs=87.2
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----cCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----LKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~~~~yD 151 (269)
+..+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..+. -.+++++.+|+.++ . ...+||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~-----~~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG-----LGNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT-----CTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-----CCCceEEECCHHHHHHHHHhcCCCee
Confidence 7789999999999999999986 6799999999999999999986543 23499999999887 2 267899
Q ss_pred EEEEcCCCCCCCCCCC-----CcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 152 GILVDLFSKGSLLSEL-----EDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l-----~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
+|++|++......... ...++++.+.+.|+|||++++...+..
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 9999864321111110 124788999999999999999876653
No 196
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.28 E-value=2.8e-11 Score=109.32 Aligned_cols=106 Identities=20% Similarity=0.251 Sum_probs=83.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|..+..+++++|+.+++++|+ |.+++.|++++.... ..++++++.+|+.+..+. .||+|+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~----l~~~v~~~~~d~~~~~p~-~~D~v~ 273 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG----LADRCEILPGDFFETIPD-GADVYL 273 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEEEEECCTTTCCCS-SCSEEE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC----cCCceEEeccCCCCCCCC-CceEEE
Confidence 34578999999999999999999999999999999 999999999874221 136899999999843333 899999
Q ss_pred EcCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+...- .++.. ..+++++++.|+|||.+++...
T Consensus 274 ~~~vl-----h~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 274 IKHVL-----HDWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp EESCG-----GGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred hhhhh-----ccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 74321 11222 2699999999999999988543
No 197
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.28 E-value=1.1e-11 Score=112.34 Aligned_cols=105 Identities=10% Similarity=-0.045 Sum_probs=83.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc-cc--cCCCeeEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK-AS--LKDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~-~~--~~~~yD~I 153 (269)
++.+||||| |+|.++..+++..++.+|+++|+||.+++.|++++.... -.+++++.+|+.+ +. ..++||+|
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g-----~~~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG-----YEDIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT-----CCCEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCCEEEEEChhhhhchhhccCCccEE
Confidence 578999999 999999999987777899999999999999999874322 1279999999998 42 34689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCc-EEEEEecC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGG-RIMVNVGG 192 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG-~l~~~~~~ 192 (269)
++|.+-.. .. ..++++.+.+.|+||| ++++.+..
T Consensus 246 i~~~p~~~---~~--~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 246 ITDPPETL---EA--IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EECCCSSH---HH--HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EECCCCch---HH--HHHHHHHHHHHcccCCeEEEEEEec
Confidence 99853211 11 3789999999999999 44555544
No 198
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.27 E-value=5e-13 Score=113.22 Aligned_cols=104 Identities=13% Similarity=0.030 Sum_probs=80.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++.... ..++++++++|+.++...++||+|+++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~D~v~~~ 151 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYG----IADKIEFICGDFLLLASFLKADVVFLS 151 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEESCHHHHGGGCCCSEEEEC
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC----CCcCeEEEECChHHhcccCCCCEEEEC
Confidence 6789999999999999999984 5899999999999999999874322 124799999999988666799999987
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
..-.. ... ....+..+++.|+|||.+++..
T Consensus 152 ~~~~~--~~~--~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 152 PPWGG--PDY--ATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCCSS--GGG--GGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCcCC--cch--hhhHHHHHHhhcCCcceeHHHH
Confidence 53221 110 1124556888999999876643
No 199
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.27 E-value=1.2e-11 Score=112.19 Aligned_cols=101 Identities=11% Similarity=0.044 Sum_probs=85.4
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCcc---------------ccccCCCCcEEEEEccc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALE---------------KLEKSYPDRLFVYVGNA 141 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~---------------~~~~~~~~rv~~~~~D~ 141 (269)
++.+|||+|||+|..+..++++.++.+|+++|+|++.++.+++++..+ . -.+++++++|+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g-----l~~i~v~~~Da 121 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG-----EKTIVINHDDA 121 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES-----SSEEEEEESCH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC-----CCceEEEcCcH
Confidence 678999999999999999999877789999999999999999987544 2 12399999999
Q ss_pred ccc--ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 142 LKA--SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 142 ~~~--~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
..+ ...++||+|++|.+.. ..++++.+.+.|++||++.+.+
T Consensus 122 ~~~~~~~~~~fD~I~lDP~~~--------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 122 NRLMAERHRYFHFIDLDPFGS--------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHSTTCEEEEEECCSSC--------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhccCCCCEEEeCCCCC--------HHHHHHHHHHhcCCCCEEEEEe
Confidence 987 2356899999987532 3689999999999999988865
No 200
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.27 E-value=2.1e-11 Score=99.63 Aligned_cols=125 Identities=10% Similarity=0.080 Sum_probs=88.5
Q ss_pred CCCCCCCCcEEEEcCcccHHHHHHHHHCCC---------ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEE-Eccc
Q 035593 72 LPPILPPGPIGILGFGAGSAARLILDLYPE---------AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVY-VGNA 141 (269)
Q Consensus 72 ~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~---------~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~-~~D~ 141 (269)
+..+.+..+|||||||+|.++..+++.++. .+|+++|+++.. . .++++++ .+|+
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~--------~~~~~~~~~~d~ 80 (196)
T 2nyu_A 17 HQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P--------LEGATFLCPADV 80 (196)
T ss_dssp HCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C--------CTTCEEECSCCT
T ss_pred cCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c--------CCCCeEEEeccC
Confidence 334567889999999999999999998764 899999999831 1 1358888 8887
Q ss_pred cccc---------cCCCeeEEEEcCCCCCCCCCC-CCc-------HHHHHHHHhhccCCcEEEEEecCCCccccccccch
Q 035593 142 LKAS---------LKDGFSGILVDLFSKGSLLSE-LED-------PNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDG 204 (269)
Q Consensus 142 ~~~~---------~~~~yD~I~~d~~~~~~~~~~-l~~-------~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~ 204 (269)
.... ..++||+|+++..... ...+ ... ..+++.+.+.|+|||.+++..+...
T Consensus 81 ~~~~~~~~~~~~~~~~~fD~V~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~---------- 149 (196)
T 2nyu_A 81 TDPRTSQRILEVLPGRRADVILSDMAPNA-TGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS---------- 149 (196)
T ss_dssp TSHHHHHHHHHHSGGGCEEEEEECCCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG----------
T ss_pred CCHHHHHHHHHhcCCCCCcEEEeCCCCCC-CCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc----------
Confidence 6541 2358999999753221 1111 001 3789999999999999999876542
Q ss_pred hHHHHHHHHHHHHHhcCceEEE
Q 035593 205 KVVMEATLKAMHKVFGKKLYVL 226 (269)
Q Consensus 205 ~~~~~~~~~~l~~~F~~~v~~~ 226 (269)
....+...++..|. .+..+
T Consensus 150 --~~~~~~~~l~~~f~-~v~~~ 168 (196)
T 2nyu_A 150 --QSRRLQRRLTEEFQ-NVRII 168 (196)
T ss_dssp --GGHHHHHHHHHHEE-EEEEE
T ss_pred --cHHHHHHHHHHHhc-ceEEE
Confidence 13456667777885 45554
No 201
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.26 E-value=4.7e-11 Score=108.92 Aligned_cols=115 Identities=15% Similarity=-0.004 Sum_probs=87.8
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----cCCCe
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----LKDGF 150 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~~~~y 150 (269)
.++.+|||+|||+|.++..+++. ...+|++||+++.+++.|++++..+.. ..++++++.+|+.++ . ...+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ngl---~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNKL---DLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECCHHHHHHHHHhcCCCC
Confidence 46789999999999999999984 246999999999999999998864431 012799999999887 2 25789
Q ss_pred eEEEEcCCCCCCCCCC-----CCcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 151 SGILVDLFSKGSLLSE-----LEDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~-----l~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
|+|++|.+........ -...+++..+.+.|+|||++++.+.+..
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 9999996432111111 1125789999999999999998876553
No 202
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.26 E-value=1.6e-11 Score=105.78 Aligned_cols=110 Identities=13% Similarity=0.107 Sum_probs=81.6
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChH------HHHHHHHhcCccccccCCCCcEEEEEcc-cccc--
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPS------VIKVAREFFALEKLEKSYPDRLFVYVGN-ALKA-- 144 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~------~~~~a~~~~~~~~~~~~~~~rv~~~~~D-~~~~-- 144 (269)
+.++.+|||||||+|.++..+++++ |+.+|+++|+++. +++.|++++.... ..++++++.+| ....
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~ 116 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP----LGDRLTVHFNTNLSDDLG 116 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST----TGGGEEEECSCCTTTCCG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC----CCCceEEEECChhhhccC
Confidence 4578899999999999999999875 6689999999997 9999998874321 12579999998 3222
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCC-cHHHHHHHHhhccCCcEEEEEecCC
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELE-DPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~-~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
...++||+|++...- .++. ...+++.+++.++|||.+++..+..
T Consensus 117 ~~~~~~fD~v~~~~~l-----~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSL-----WYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp GGTTCCCSEEEEESCG-----GGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCCCCCEEEEEEccch-----hhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 245789999975321 1221 2456677777777799999876554
No 203
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.26 E-value=1.2e-11 Score=108.01 Aligned_cols=107 Identities=17% Similarity=0.106 Sum_probs=74.9
Q ss_pred CCCcEEEEcCcccHHHHH----HHHHCCCceE--EEEECChHHHHHHHHhcCccccccCCCCcE--EEEEccccccc---
Q 035593 77 PPGPIGILGFGAGSAARL----ILDLYPEAVI--HGWELDPSVIKVAREFFALEKLEKSYPDRL--FVYVGNALKAS--- 145 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~----l~~~~p~~~v--~~vEidp~~~~~a~~~~~~~~~~~~~~~rv--~~~~~D~~~~~--- 145 (269)
++.+|||||||+|.++.. ++..+|+.+| +++|++++|++.|++++.... .-+++ .+..+|+.++.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS----NLENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS----SCTTEEEEEECSCHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc----CCCcceEEEEecchhhhhhhh
Confidence 467999999999976643 3444577755 999999999999998863210 01234 44556665442
Q ss_pred ----cCCCeeEEEEcCCCCCCCCCCCC-cHHHHHHHHhhccCCcEEEEEecC
Q 035593 146 ----LKDGFSGILVDLFSKGSLLSELE-DPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 146 ----~~~~yD~I~~d~~~~~~~~~~l~-~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.+++||+|++... ..++. ...++++++++|||||.+++....
T Consensus 128 ~~~~~~~~fD~V~~~~~-----l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQM-----LYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HTTTCCCCEEEEEEESC-----GGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccccCCCceeEEEEeee-----eeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 3578999997422 12222 368999999999999999986543
No 204
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.25 E-value=8.3e-12 Score=116.67 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=81.2
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
..++.+|||||||+|.++..+++ .+..+|+++|+++ +++.|++.+.... ..++++++.+|+.++..+++||+|+
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~g----l~~~v~~~~~d~~~~~~~~~fD~Iv 229 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNN----LTDRIVVIPGKVEEVSLPEQVDIII 229 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHTT----CTTTEEEEESCTTTCCCSSCEEEEE
T ss_pred hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHcC----CCCcEEEEECchhhCccCCCeEEEE
Confidence 34678999999999999999987 5677999999999 9999998764322 1368999999999874456899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
++.... ....-...+.+..+++.|+|||.+++..
T Consensus 230 s~~~~~--~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 230 SEPMGY--MLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCCHH--HHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchH--hcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 753210 0000012467778899999999998544
No 205
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.25 E-value=1.6e-11 Score=112.90 Aligned_cols=108 Identities=17% Similarity=0.095 Sum_probs=80.8
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHH-------HHhcCccccccCCCCcEEEEEccccc---
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVA-------REFFALEKLEKSYPDRLFVYVGNALK--- 143 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a-------~~~~~~~~~~~~~~~rv~~~~~D~~~--- 143 (269)
.+.+..+|||||||+|.++..+++.++..+|++||+++.+++.| ++++..... ...+++++++|...
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl---~~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGM---RLNNVEFSLKKSFVDNN 315 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB---CCCCEEEEESSCSTTCH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC---CCCceEEEEcCcccccc
Confidence 45578899999999999999999877767999999999999999 766532110 01579999987653
Q ss_pred -c-ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 144 -A-SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 144 -~-~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+ ...++||+|+++.+.. .+ ...++++++.+.|+|||.+++.
T Consensus 316 ~~~~~~~~FDvIvvn~~l~---~~--d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFLF---DE--DLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHHGGGCSEEEECCTTC---CH--HHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccccCCCCEEEEeCccc---cc--cHHHHHHHHHHhCCCCeEEEEe
Confidence 2 1246899999753211 11 1347789999999999999874
No 206
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.25 E-value=2.3e-11 Score=107.85 Aligned_cols=110 Identities=18% Similarity=0.210 Sum_probs=84.2
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||+|..+..+++.+|+.+++++|++ .+++.|++++.... ...+++++.+|+.+...++.||+|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG----VASRYHTIAGSAFEVDYGNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT----CGGGEEEEESCTTTSCCCSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC----CCcceEEEecccccCCCCCCCcEEEE
Confidence 56789999999999999999999999999999999 99999998864221 12479999999987633445999997
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
...-+. .+ .-...++++++++.|+|||.+++....
T Consensus 239 ~~~l~~-~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 239 PNFLHH-FD-VATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp ESCGGG-SC-HHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cchhcc-CC-HHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 321110 00 011258999999999999988776543
No 207
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.24 E-value=5.2e-11 Score=107.00 Aligned_cols=105 Identities=20% Similarity=0.191 Sum_probs=82.6
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|..+..+++.+|+.+++++|+ |.+++.|++++.... ...+++++.+|+.+... ..+|+|+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~-~~~D~v~ 261 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG----VADRMRGIAVDIYKESY-PEADAVL 261 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT----CTTTEEEEECCTTTSCC-CCCSEEE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC----CCCCEEEEeCccccCCC-CCCCEEE
Confidence 44678999999999999999999999999999999 999999998864221 13579999999987622 2349999
Q ss_pred EcCCCCCCCCCCCC---cHHHHHHHHhhccCCcEEEEEe
Q 035593 155 VDLFSKGSLLSELE---DPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 155 ~d~~~~~~~~~~l~---~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+...- .++. ..++++++++.|+|||.+++..
T Consensus 262 ~~~vl-----h~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 262 FCRIL-----YSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EESCG-----GGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred Eechh-----ccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 74321 1122 3689999999999999997654
No 208
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.24 E-value=6e-12 Score=107.52 Aligned_cols=77 Identities=12% Similarity=-0.064 Sum_probs=63.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc-c---cc---CCC
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK-A---SL---KDG 149 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~-~---~~---~~~ 149 (269)
++.+|||+|||+|.++..++++.++.+|+++|+++.+++.|++++.... ...+++++++|+.+ + .. +++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN----LSDLIKVVKVPQKTLLMDALKEESEII 140 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT----CTTTEEEEECCTTCSSTTTSTTCCSCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC----CCccEEEEEcchhhhhhhhhhcccCCc
Confidence 4679999999999999999887778899999999999999999874322 13469999999876 2 12 258
Q ss_pred eeEEEEcC
Q 035593 150 FSGILVDL 157 (269)
Q Consensus 150 yD~I~~d~ 157 (269)
||+|+++.
T Consensus 141 fD~i~~np 148 (254)
T 2h00_A 141 YDFCMCNP 148 (254)
T ss_dssp BSEEEECC
T ss_pred ccEEEECC
Confidence 99999984
No 209
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.24 E-value=4.3e-11 Score=107.36 Aligned_cols=106 Identities=20% Similarity=0.254 Sum_probs=83.0
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++++.... ..++++++.+|+.+.. +..||+|++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~-~~~~D~v~~ 255 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG----LSDRVDVVEGDFFEPL-PRKADAIIL 255 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT----CTTTEEEEECCTTSCC-SSCEEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC----CCCceEEEeCCCCCCC-CCCccEEEE
Confidence 3578999999999999999999999999999999 999999998864222 1358999999987642 235999987
Q ss_pred cCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
...-+ ++.. .++++++++.|+|||.+++....
T Consensus 256 ~~vl~-----~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 256 SFVLL-----NWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ESCGG-----GSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccccc-----CCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 43211 1222 47999999999999988876543
No 210
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.24 E-value=3.7e-11 Score=111.28 Aligned_cols=115 Identities=13% Similarity=0.112 Sum_probs=89.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCee
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFS 151 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD 151 (269)
..++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++.... -.+++++.+|+..+ ...++||
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-----~~nv~v~~~Da~~l~~~~~~~FD 177 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-----VSNAIVTNHAPAELVPHFSGFFD 177 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-----CSSEEEECCCHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEeCCHHHhhhhccccCC
Confidence 45688999999999999999998765 4799999999999999998874322 24699999999987 3467999
Q ss_pred EEEEcCCCCC-CCCCC-----------------CCcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 152 GILVDLFSKG-SLLSE-----------------LEDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 152 ~I~~d~~~~~-~~~~~-----------------l~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
+|++|++-.. ++... -...++++.+.+.|||||.|++...+..
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 9999975321 11100 0113789999999999999998877654
No 211
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.24 E-value=2.4e-11 Score=110.81 Aligned_cols=114 Identities=17% Similarity=0.084 Sum_probs=87.4
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----cCCCe
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----LKDGF 150 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~~~~y 150 (269)
.+..+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++..+.. .++++++.+|+.++ . ...+|
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~----~~~v~~~~~d~~~~~~~~~~~~~~f 290 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGV----EDRMKFIVGSAFEEMEKLQKKGEKF 290 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC----CccceEEECCHHHHHHHHHhhCCCC
Confidence 36889999999999999999984 445999999999999999998854431 23799999999886 2 26789
Q ss_pred eEEEEcCCCCCCCCCC-----CCcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 151 SGILVDLFSKGSLLSE-----LEDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~-----l~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
|+|++|.+........ -...+++..+.+.|+|||++++...+..
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 9999986432110001 1124788999999999999988776653
No 212
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.23 E-value=3.4e-12 Score=109.13 Aligned_cols=114 Identities=11% Similarity=0.007 Sum_probs=81.1
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccc-------------cCC-----------C
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLE-------------KSY-----------P 131 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~-------------~~~-----------~ 131 (269)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++...... ... .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4578999999999999998887433 59999999999999999987422100 000 0
Q ss_pred CcE-EEEEcccccc-c-cC---CCeeEEEEcCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEEec
Q 035593 132 DRL-FVYVGNALKA-S-LK---DGFSGILVDLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 132 ~rv-~~~~~D~~~~-~-~~---~~yD~I~~d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
.++ +++.+|+.+. . .. ++||+|++...-. ..+++. ....++++++++|+|||.+++...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD-AACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH-HHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhh-hhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 127 9999999876 2 34 7899999753211 011111 235899999999999999988653
No 213
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.23 E-value=6.9e-11 Score=98.45 Aligned_cols=98 Identities=17% Similarity=0.228 Sum_probs=79.1
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---ccCCCeeE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---SLKDGFSG 152 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---~~~~~yD~ 152 (269)
.++.+|||||||+|..+..+++. +.+++++|+++.+++.|++.+ .+++.+|+.++ ...++||+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~~~~~~~~~~fD~ 96 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL------------DHVVLGDIETMDMPYEEEQFDC 96 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS------------SEEEESCTTTCCCCSCTTCEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC------------CcEEEcchhhcCCCCCCCccCE
Confidence 46889999999999999999985 489999999999999998764 26788898764 34578999
Q ss_pred EEEcCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEEecC
Q 035593 153 ILVDLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 153 I~~d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|++... ..++ ...++++.+++.|+|||.+++....
T Consensus 97 v~~~~~-----l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 97 VIFGDV-----LEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEESC-----GGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EEECCh-----hhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 997522 1111 2368999999999999999997754
No 214
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.22 E-value=5.2e-11 Score=111.15 Aligned_cols=113 Identities=17% Similarity=0.125 Sum_probs=88.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c-cCCCeeEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S-LKDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~-~~~~yD~I 153 (269)
+..+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++.... -.+++++.+|+..+ . ..+.||+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-----~~nv~~~~~D~~~~~~~~~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG-----ISNVALTHFDGRVFGAAVPEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-----CCSEEEECCCSTTHHHHSTTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEeCCHHHhhhhccccCCEE
Confidence 778999999999999999999875 5799999999999999998874222 24699999999987 2 56789999
Q ss_pred EEcCCCCC-CC----CCC--CC-----------cHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 154 LVDLFSKG-SL----LSE--LE-----------DPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 154 ~~d~~~~~-~~----~~~--l~-----------~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
++|++-.. +. +.. .. ..++++.+.+.|||||+|++...+..
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 99975321 11 111 11 24789999999999999998876553
No 215
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.22 E-value=1.8e-11 Score=108.84 Aligned_cols=105 Identities=18% Similarity=0.150 Sum_probs=82.4
Q ss_pred CcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEcCC
Q 035593 79 GPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVDLF 158 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d~~ 158 (269)
.+|||||||+|..+..+++.+|+.+++++|+ |.+++.|++++..... .++++++.+|+.+. .++.||+|++...
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~-~~~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA----GERVSLVGGDMLQE-VPSNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH----TTSEEEEESCTTTC-CCSSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC----CCcEEEecCCCCCC-CCCCCCEEEEchh
Confidence 8999999999999999999999999999999 9999999998642211 35899999999773 3467999997532
Q ss_pred CCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 159 SKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 159 ~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
-+. .+. -....+++++++.|+|||.+++.-.
T Consensus 243 l~~-~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 243 IGD-LDE-AASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp GGG-CCH-HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ccC-CCH-HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 211 010 0123899999999999999988754
No 216
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.22 E-value=9.3e-11 Score=108.08 Aligned_cols=114 Identities=17% Similarity=0.164 Sum_probs=88.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc---cCCCee
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS---LKDGFS 151 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~---~~~~yD 151 (269)
..++.+|||+|||+|..+..+++..++.+|+++|+++.+++.+++++.... -+++++.+|+.... ..++||
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g------~~~~~~~~D~~~~~~~~~~~~fD 317 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG------MKATVKQGDGRYPSQWCGEQQFD 317 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT------CCCEEEECCTTCTHHHHTTCCEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC------CCeEEEeCchhhchhhcccCCCC
Confidence 356789999999999999999998888899999999999999999874321 24789999998872 346899
Q ss_pred EEEEcCCCCC-CCCCCC-----------------CcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 152 GILVDLFSKG-SLLSEL-----------------EDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 152 ~I~~d~~~~~-~~~~~l-----------------~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
+|++|++-.. +...+. ...++++.+.+.|||||.+++...+..
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 9999975331 111100 014789999999999999999876553
No 217
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.21 E-value=9.1e-12 Score=108.35 Aligned_cols=132 Identities=15% Similarity=0.076 Sum_probs=90.1
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEE--EccccccccCCCee
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVY--VGNALKASLKDGFS 151 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~--~~D~~~~~~~~~yD 151 (269)
.+.+..+|||||||+|.++..++++ .+|++||+++ |+..+++.. ... ...+.+++++ .+|+.++. +++||
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~-~~~--~~~~~~v~~~~~~~D~~~l~-~~~fD 150 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKP-RLV--ETFGWNLITFKSKVDVTKME-PFQAD 150 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCC-CCC--CCTTGGGEEEECSCCGGGCC-CCCCS
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhch-hhh--hhcCCCeEEEeccCcHhhCC-CCCcC
Confidence 4557889999999999999999885 6899999999 543332221 100 0001268999 89998864 57899
Q ss_pred EEEEcCCCCCCCCCC-CC---cHHHHHHHHhhccCCc--EEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEE
Q 035593 152 GILVDLFSKGSLLSE-LE---DPNTWEKLRQCLRKGG--RIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYV 225 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~-l~---~~e~~~~~~~~L~pgG--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~ 225 (269)
+|++|.. . ....+ .. ...+++.+.+.|+||| .+++.++.+. .......++.+++.|+ .+.+
T Consensus 151 ~Vvsd~~-~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~----------~~~~~~~l~~l~~~f~-~v~v 217 (276)
T 2wa2_A 151 TVLCDIG-E-SNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPY----------SCDVLEALMKMQARFG-GGLI 217 (276)
T ss_dssp EEEECCC-C-CCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCC----------SHHHHHHHHHHHHHHC-CEEE
T ss_pred EEEECCC-c-CCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCC----------chhHHHHHHHHHHHcC-CEEE
Confidence 9999865 2 11111 00 1137899999999999 9999887642 1223466778889996 4544
Q ss_pred E
Q 035593 226 L 226 (269)
Q Consensus 226 ~ 226 (269)
.
T Consensus 218 ~ 218 (276)
T 2wa2_A 218 R 218 (276)
T ss_dssp C
T ss_pred E
Confidence 4
No 218
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.20 E-value=1.6e-11 Score=111.14 Aligned_cols=97 Identities=18% Similarity=0.205 Sum_probs=73.2
Q ss_pred CCCCcEEEEcCc-------ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-cc-
Q 035593 76 LPPGPIGILGFG-------AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SL- 146 (269)
Q Consensus 76 ~~~~~VL~iG~G-------~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~- 146 (269)
.++.+||||||| +|.....+.+.+|+.+|++||+++.|. .. .++++++++|+.+. ..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~~--------~~rI~fv~GDa~dlpf~~ 280 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------VD--------ELRIRTIQGDQNDAEFLD 280 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------GC--------BTTEEEEECCTTCHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------hc--------CCCcEEEEecccccchhh
Confidence 457899999999 455444554556899999999999972 11 36899999999885 22
Q ss_pred -----CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 147 -----KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 147 -----~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
.++||+|++|.. + .. -....+|++++++|||||++++.-.
T Consensus 281 ~l~~~d~sFDlVisdgs-H--~~--~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 281 RIARRYGPFDIVIDDGS-H--IN--AHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp HHHHHHCCEEEEEECSC-C--CH--HHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred hhhcccCCccEEEECCc-c--cc--hhHHHHHHHHHHhcCCCeEEEEEec
Confidence 579999998743 1 11 1135899999999999999999643
No 219
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.20 E-value=1.4e-10 Score=107.52 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=89.0
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCC-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc--c-CCCe
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS--L-KDGF 150 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~--~-~~~y 150 (269)
..++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.+++++...+ -++++++.+|+..+. . .++|
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG-----IKIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT-----CCSEEEECSCTTCCSSSSCSSCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-----CCcEEEEEcChhhcchhhccCCC
Confidence 456789999999999999999998876 799999999999999998864221 246999999998872 2 2689
Q ss_pred eEEEEcCCCCC-CCCC---CC--------------CcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 151 SGILVDLFSKG-SLLS---EL--------------EDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 151 D~I~~d~~~~~-~~~~---~l--------------~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
|+|++|++... +... .. ...++++.+.+.|||||.+++...+..
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 99999965431 1110 00 015789999999999999998776654
No 220
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.20 E-value=1.8e-11 Score=105.90 Aligned_cols=133 Identities=17% Similarity=0.075 Sum_probs=90.5
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEE--EccccccccCCCee
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVY--VGNALKASLKDGFS 151 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~--~~D~~~~~~~~~yD 151 (269)
.+.+..+|||||||+|.++..++++ .+|++||+++ ++..+++. .... ...+.+++++ .+|+.++. +++||
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~--~~~~~~v~~~~~~~D~~~l~-~~~fD 142 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRIT--ESYGWNIVKFKSRVDIHTLP-VERTD 142 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCC--CBTTGGGEEEECSCCTTTSC-CCCCS
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhh--hccCCCeEEEecccCHhHCC-CCCCc
Confidence 4557889999999999999999884 6899999999 53322221 1100 0001268889 89998865 57899
Q ss_pred EEEEcCCCCCCCCCC-CC---cHHHHHHHHhhccCCc--EEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEE
Q 035593 152 GILVDLFSKGSLLSE-LE---DPNTWEKLRQCLRKGG--RIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYV 225 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~-l~---~~e~~~~~~~~L~pgG--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~ 225 (269)
+|++|.. . ....+ +. ...+++.+.+.|+||| .|++.++.+. .......+..+++.|+ .+.+
T Consensus 143 ~V~sd~~-~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~----------~~~~~~~l~~l~~~f~-~v~~ 209 (265)
T 2oxt_A 143 VIMCDVG-E-SSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPY----------SVEVMERLSVMQRKWG-GGLV 209 (265)
T ss_dssp EEEECCC-C-CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTT----------SHHHHHHHHHHHHHHC-CEEE
T ss_pred EEEEeCc-c-cCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCC----------ChhHHHHHHHHHHHcC-CEEE
Confidence 9999865 2 11111 10 1137899999999999 9999887642 1223467788889996 4555
Q ss_pred EE
Q 035593 226 LS 227 (269)
Q Consensus 226 ~~ 227 (269)
.+
T Consensus 210 ~k 211 (265)
T 2oxt_A 210 RN 211 (265)
T ss_dssp CC
T ss_pred EE
Confidence 54
No 221
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.19 E-value=9.3e-10 Score=90.67 Aligned_cols=101 Identities=15% Similarity=0.091 Sum_probs=78.5
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||+|||+|.++..+++. ...+|+++|+|+.+++.|++++.... -+++++.+|+.++ +.+||+|++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~~~~~d~~~~--~~~~D~v~~ 118 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFK------GKFKVFIGDVSEF--NSRVDIVIM 118 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGT------TSEEEEESCGGGC--CCCCSEEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC------CCEEEEECchHHc--CCCCCEEEE
Confidence 46789999999999999999885 34589999999999999999875432 2799999999886 348999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|.+-... ..-....+++.+.+.| ||++++.
T Consensus 119 ~~p~~~~--~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 119 NPPFGSQ--RKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp CCCCSSS--STTTTHHHHHHHHHHC--SEEEEEE
T ss_pred cCCCccc--cCCchHHHHHHHHHhc--CcEEEEE
Confidence 8643211 1123468999999998 6666554
No 222
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.19 E-value=4.4e-11 Score=116.56 Aligned_cols=114 Identities=16% Similarity=0.060 Sum_probs=86.9
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGI 153 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I 153 (269)
.+.++|||+|||+|.++..+++. ...+|++||+|+.+++.|++++..+.. ...+++++++|+.++ ...++||+|
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl---~~~~v~~i~~D~~~~l~~~~~~fD~I 613 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGL---TGRAHRLIQADCLAWLREANEQFDLI 613 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC---CSTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC---CccceEEEecCHHHHHHhcCCCccEE
Confidence 36789999999999999998873 344799999999999999999865431 125899999999987 446789999
Q ss_pred EEcCCCCCCCC--CCC-----CcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSKGSLL--SEL-----EDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~~~~~--~~l-----~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++|++.-.... ... ...++++.+.+.|+|||+|++.+...
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 99875321000 001 12467889999999999999877653
No 223
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.19 E-value=1.1e-10 Score=113.56 Aligned_cols=109 Identities=17% Similarity=0.179 Sum_probs=82.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCcccc-ccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKL-EKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~-~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
++.+|||||||+|.++..+++.. +..+|++||+++.+++.|++++..... .....++++++++|+.++ ...+.||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 67899999999999999999876 457999999999999999985421100 000135799999999988 556789999
Q ss_pred EEcCCCCCCCCCCCCcH---HHHHHHHhhccCCcEEEEEec
Q 035593 154 LVDLFSKGSLLSELEDP---NTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~---e~~~~~~~~L~pgG~l~~~~~ 191 (269)
++.. ...|+... .+++.+++.|+|| .+++...
T Consensus 801 V~~e-----VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 801 TCLE-----VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EEES-----CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EEeC-----chhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 9742 23344333 5899999999998 6666553
No 224
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.18 E-value=1.5e-10 Score=103.96 Aligned_cols=107 Identities=20% Similarity=0.256 Sum_probs=82.6
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.+..+|||||||+|..+..+++++|+.++++.|+ |.+++.|+++..... .+|++++.+|+++- ....+|+|++
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-----~~rv~~~~gD~~~~-~~~~~D~~~~ 250 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-----EEQIDFQEGDFFKD-PLPEADLYIL 250 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-------CCSEEEEESCTTTS-CCCCCSEEEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-----cCceeeecCccccC-CCCCceEEEe
Confidence 3467999999999999999999999999999998 999999999876432 57999999998754 3346899987
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
--.-+.. +. -....+++++++.|+|||.+++.-.
T Consensus 251 ~~vlh~~-~d-~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 251 ARVLHDW-AD-GKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp ESSGGGS-CH-HHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred eeecccC-CH-HHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 4222211 10 0124789999999999998877543
No 225
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.17 E-value=6.6e-12 Score=108.16 Aligned_cols=113 Identities=13% Similarity=0.022 Sum_probs=76.8
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCcccccc-------------C-----------C
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEK-------------S-----------Y 130 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~-------------~-----------~ 130 (269)
.+..+|||||||+|.++..++. ++. +|+++|+|+.|++.|++++....... . .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~--~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAAC--DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGG--GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHH--hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4578999999999988776655 343 79999999999999998763210000 0 0
Q ss_pred CCcEE-EEEcccccc-c----cCCCeeEEEEcCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEEec
Q 035593 131 PDRLF-VYVGNALKA-S----LKDGFSGILVDLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 131 ~~rv~-~~~~D~~~~-~----~~~~yD~I~~d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
..+++ ++.+|..+. . ..++||+|++...-+ ...+.. ....+++++++.|||||.|++...
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~-~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAME-CACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH-HHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHH-HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 01344 889998874 1 246899999753211 011111 124789999999999999998753
No 226
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.16 E-value=3.9e-11 Score=105.80 Aligned_cols=130 Identities=13% Similarity=0.105 Sum_probs=89.1
Q ss_pred CCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEEC----ChHHHHHHHHhcCccccccCCCCcEEEEEc-cccccccC
Q 035593 73 PPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWEL----DPSVIKVAREFFALEKLEKSYPDRLFVYVG-NALKASLK 147 (269)
Q Consensus 73 ~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEi----dp~~~~~a~~~~~~~~~~~~~~~rv~~~~~-D~~~~~~~ 147 (269)
..+.+..+|||||||+|.++..++++ .+|++||+ ++.+++.+ .... ...++++++.+ |+..+. .
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~----~~~~---~~~~~v~~~~~~D~~~l~-~ 146 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI----PMST---YGWNLVRLQSGVDVFFIP-P 146 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC----CCCS---TTGGGEEEECSCCTTTSC-C
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH----Hhhh---cCCCCeEEEeccccccCC-c
Confidence 34556789999999999999999985 58999999 55433211 1110 00257999999 887763 4
Q ss_pred CCeeEEEEcCCCCCCCCCCCC----cHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCce
Q 035593 148 DGFSGILVDLFSKGSLLSELE----DPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKL 223 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~----~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v 223 (269)
++||+|++|.... ...... ...+++.+.+.|+|||.|++.++.+. ......++..++..|. .+
T Consensus 147 ~~fD~V~sd~~~~--~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~----------~~~~~~~l~~l~~~f~-~v 213 (305)
T 2p41_A 147 ERCDTLLCDIGES--SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY----------MSSVIEKMEALQRKHG-GA 213 (305)
T ss_dssp CCCSEEEECCCCC--CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC----------SHHHHHHHHHHHHHHC-CE
T ss_pred CCCCEEEECCccc--cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCC----------CchHHHHHHHHHHHcC-CE
Confidence 6899999986532 111110 11578889999999999999887552 1234577788888996 45
Q ss_pred EEE
Q 035593 224 YVL 226 (269)
Q Consensus 224 ~~~ 226 (269)
...
T Consensus 214 ~~~ 216 (305)
T 2p41_A 214 LVR 216 (305)
T ss_dssp EEC
T ss_pred EEe
Confidence 443
No 227
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.16 E-value=5.2e-11 Score=108.28 Aligned_cols=103 Identities=17% Similarity=0.132 Sum_probs=85.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCC-ceEEEEECChHHHHHHHHhcCccccccCCCCc-EEEEEcccccc-c-c-CCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDR-LFVYVGNALKA-S-L-KDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~r-v~~~~~D~~~~-~-~-~~~yD 151 (269)
+..+|||++||+|..+..++++.++ .+|++||+|+..++.+++++..+.. ..+ ++++.+|+.++ . . .++||
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl----~~~~v~v~~~Da~~~l~~~~~~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI----PEDRYEIHGMEANFFLRKEWGFGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC----CGGGEEEECSCHHHHHHSCCSSCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC----CCceEEEEeCCHHHHHHHhhCCCCc
Confidence 4679999999999999999987655 6999999999999999999865542 235 99999999887 3 2 45899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+|++|++.. ..++++.+.+.|++||++.+.+.
T Consensus 128 ~V~lDP~g~--------~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 128 YVDLDPFGT--------PVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp EEEECCSSC--------CHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEECCCcC--------HHHHHHHHHHHhCCCCEEEEEec
Confidence 999998532 35799999999999999988763
No 228
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.16 E-value=1.2e-10 Score=101.02 Aligned_cols=108 Identities=13% Similarity=0.160 Sum_probs=77.2
Q ss_pred CCCcEEEEcCcccH----HHHHHHHHCC----CceEEEEECChHHHHHHHHhcC-------ccc----------------
Q 035593 77 PPGPIGILGFGAGS----AARLILDLYP----EAVIHGWELDPSVIKVAREFFA-------LEK---------------- 125 (269)
Q Consensus 77 ~~~~VL~iG~G~G~----~~~~l~~~~p----~~~v~~vEidp~~~~~a~~~~~-------~~~---------------- 125 (269)
++.+||++|||+|. ++..+++..+ +.+|+++|||++|++.|++..- +++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 6667776544 4699999999999999998641 000
Q ss_pred -ccc--CCCCcEEEEEcccccc--ccCCCeeEEEEcCCCCCCCCCCCC---cHHHHHHHHhhccCCcEEEEE
Q 035593 126 -LEK--SYPDRLFVYVGNALKA--SLKDGFSGILVDLFSKGSLLSELE---DPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 126 -~~~--~~~~rv~~~~~D~~~~--~~~~~yD~I~~d~~~~~~~~~~l~---~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+.. .-..++++..+|..+. ...++||+|++- .+..++. ...+++.+++.|+|||.|++-
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~cr-----nvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCR-----NVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEEC-----SSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEEC-----CchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 000 0013699999999874 224689999982 1112222 258999999999999999873
No 229
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.16 E-value=2.9e-10 Score=94.13 Aligned_cols=100 Identities=10% Similarity=-0.018 Sum_probs=76.7
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
+.++++||++|+| ..+.++++ .++.+|++||.|++..+.|++++...+.. ...+++++.+|+.+.
T Consensus 28 l~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~--~~~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 28 YEEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPA--EGTEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp HHHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCC--TTCEEEEEECCCSSBCGGGCBSSST
T ss_pred hhCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCCceEEEEeCchhhhcccccccch
Confidence 3468899999984 67777776 35789999999999999999998533210 035899999996531
Q ss_pred -------------c--cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 145 -------------S--LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 145 -------------~--~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
. ..++||+||+|+.. ...++..+.+.|+|||++++
T Consensus 103 ~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 103 KWRSYPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp TGGGTTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEE
T ss_pred hhhhHHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEE
Confidence 0 12689999999742 24777888899999999988
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.16 E-value=1e-10 Score=105.86 Aligned_cols=120 Identities=15% Similarity=0.005 Sum_probs=84.9
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
....|.... ..+..+|||+|||+|.++..++...+..+|+++|+|+.+++.|++++..... .++++++++|+.++
T Consensus 206 la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl----~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 206 IANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV----LDKIKFIQGDATQL 280 (373)
T ss_dssp HHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC----GGGCEEEECCGGGG
T ss_pred HHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC----CCceEEEECChhhC
Confidence 344443332 5578899999999999999999866556999999999999999998743321 24799999999998
Q ss_pred -ccCCCeeEEEEcCCCCCCCCC--CC--CcHHHHHHHHhhccCCcEEEEEec
Q 035593 145 -SLKDGFSGILVDLFSKGSLLS--EL--EDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~--~l--~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
...++||+|++|.+-...... .+ ...++++.+++.| +|.+++-..
T Consensus 281 ~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 281 SQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp GGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 445789999998643211111 11 0156788888888 555554443
No 231
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.15 E-value=2.8e-10 Score=98.42 Aligned_cols=110 Identities=16% Similarity=0.207 Sum_probs=77.6
Q ss_pred CCcEEEEcCcc---cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc-----c--C
Q 035593 78 PGPIGILGFGA---GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS-----L--K 147 (269)
Q Consensus 78 ~~~VL~iG~G~---G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~-----~--~ 147 (269)
..+|||||||. |.+...+.+..|+.+|++||.||.|++.||+.+.-.. ..+++++++|+++.. . .
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-----~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-----EGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-----SSEEEEEECCTTCHHHHHTCHHHH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-----CCcEEEEEecccChhhhhcccccc
Confidence 46899999996 3344444455799999999999999999999875321 247999999998751 1 3
Q ss_pred CCee-----EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 148 DGFS-----GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 148 ~~yD-----~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+.|| +|++...-+ .++.+-.....++.+++.|+|||+|++.....
T Consensus 154 ~~~D~~~p~av~~~avLH-~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVH-FVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TTCCTTSCCEEEEESCGG-GSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cccCcCCcchHHhhhhHh-cCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 4565 455543222 12221112479999999999999999987654
No 232
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.15 E-value=1.5e-10 Score=103.54 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=77.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|..+..+++++|+.+++++|+ +.++. +++..... ..++++++.+|+.+..+ .||+|+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~----~~~~v~~~~~d~~~~~p--~~D~v~ 252 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD----VAGRWKVVEGDFLREVP--HADVHV 252 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG----GTTSEEEEECCTTTCCC--CCSEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC----CCCCeEEEecCCCCCCC--CCcEEE
Confidence 34578999999999999999999999999999999 55655 33332211 14689999999974333 899999
Q ss_pred EcCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+...- .++.. ..+++++++.|||||.+++.-.
T Consensus 253 ~~~vl-----h~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 253 LKRIL-----HNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EESCG-----GGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred Eehhc-----cCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 74321 12222 4899999999999999988654
No 233
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.15 E-value=2.3e-10 Score=94.01 Aligned_cols=96 Identities=14% Similarity=0.090 Sum_probs=73.3
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++. +++++.+|+.++. ++||+|++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~~d~~~~~--~~~D~v~~ 116 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG----------GVNFMVADVSEIS--GKYDTWIM 116 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT----------TSEEEECCGGGCC--CCEEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC----------CCEEEECcHHHCC--CCeeEEEE
Confidence 35789999999999999999885 44589999999999999999863 5899999998863 68999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
+..-+. . ..-...++++.+.+.| |+++++
T Consensus 117 ~~p~~~-~-~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 117 NPPFGS-V-VKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp CCCC---------CHHHHHHHHHHE--EEEEEE
T ss_pred CCCchh-c-cCchhHHHHHHHHHhc--CcEEEE
Confidence 854321 1 1112468999999998 444433
No 234
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.15 E-value=1.3e-10 Score=101.61 Aligned_cols=95 Identities=14% Similarity=0.003 Sum_probs=71.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-ccccccc----cCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-GNALKAS----LKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~D~~~~~----~~~~yD 151 (269)
+..+|||||||+|.++..++++ +..+|++||+++.|++.+.+. ++++.... .|++... ....||
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~----------~~rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ----------DDRVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT----------CTTEEEECSCCGGGCCGGGCTTCCCS
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh----------CcccceecccCceecchhhCCCCCCC
Confidence 5679999999999999999884 456999999999999986553 24554432 3554441 223499
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+|++|..-. ....++.++++.|+|||.+++-
T Consensus 154 ~v~~d~sf~-------sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFI-------SLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEEECCSSS-------CGGGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEEeeHh-------hHHHHHHHHHHHcCcCCEEEEE
Confidence 999986422 1367999999999999999885
No 235
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.13 E-value=9.2e-11 Score=97.88 Aligned_cols=94 Identities=22% Similarity=0.260 Sum_probs=76.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEE
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILV 155 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~ 155 (269)
++.+|||||||+|.++..+++. +++|+++.+++.|++. +++++.+|+.+. ...++||+|++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~------------~~~~~~~d~~~~~~~~~~fD~v~~ 108 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR------------GVFVLKGTAENLPLKDESFDFALM 108 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT------------TCEEEECBTTBCCSCTTCEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc------------CCEEEEcccccCCCCCCCeeEEEE
Confidence 4889999999999999988652 9999999999999886 268889998877 45578999997
Q ss_pred cCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 156 DLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 156 d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
...- .++ ...++++.+++.|+|||.+++.....
T Consensus 109 ~~~l-----~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 109 VTTI-----CFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp ESCG-----GGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cchH-----hhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 5321 111 23689999999999999999876543
No 236
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.13 E-value=2.1e-11 Score=106.18 Aligned_cols=111 Identities=10% Similarity=0.002 Sum_probs=74.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccc----c---------ccCC------------C
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEK----L---------EKSY------------P 131 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~----~---------~~~~------------~ 131 (269)
++.+|||||||+|..+..++. .+..+|+++|+++.|++.|++++.... | .... .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 578999999999995544433 346799999999999999998653210 0 0000 0
Q ss_pred CcEEEEEcccccc-c------cCCCeeEEEEcCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEE
Q 035593 132 DRLFVYVGNALKA-S------LKDGFSGILVDLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 132 ~rv~~~~~D~~~~-~------~~~~yD~I~~d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
..++++.+|+.+. . .+++||+|++...-. ...+.+ ....+++++++.|||||.|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~-~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLE-AVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHH-HHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhh-hhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1267788898873 1 235699999753211 011111 2368999999999999999885
No 237
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.11 E-value=5e-11 Score=109.15 Aligned_cols=103 Identities=18% Similarity=0.100 Sum_probs=75.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.+..+|||||||+|.++..++++ +.+|+++|+++.+++.|++. +.+. ....+..+++..+ ...++||+|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~------~~~~~~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRV------RTDFFEKATADDVRRTEGPANVI 175 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCE------ECSCCSHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCc------ceeeechhhHhhcccCCCCEEEE
Confidence 456789999999999999999984 66999999999999999987 3221 0011122333333 346899999
Q ss_pred EEcCCCCCCCCCCC-CcHHHHHHHHhhccCCcEEEEEec
Q 035593 154 LVDLFSKGSLLSEL-EDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 154 ~~d~~~~~~~~~~l-~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
++... ..|+ ...++++++++.|+|||++++...
T Consensus 176 ~~~~v-----l~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 176 YAANT-----LCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEESC-----GGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCh-----HHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 97532 1222 346999999999999999999764
No 238
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.10 E-value=5e-10 Score=97.85 Aligned_cols=134 Identities=14% Similarity=0.181 Sum_probs=87.8
Q ss_pred CCCCCCcEEEEcCcc------cHHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEE-EEccccccc
Q 035593 74 PILPPGPIGILGFGA------GSAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFV-YVGNALKAS 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~------G~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~-~~~D~~~~~ 145 (269)
.+.+..+|||||||+ |+ ..+++..+ +.+|++||++|. + +++++ +++|+.+..
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~----------v--------~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF----------V--------SDADSTLIGDCATVH 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC----------B--------CSSSEEEESCGGGCC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC----------C--------CCCEEEEECccccCC
Confidence 355678999999944 76 44555566 689999999997 1 14677 999998874
Q ss_pred cCCCeeEEEEcCCCCCC---CCCCC----CcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH
Q 035593 146 LKDGFSGILVDLFSKGS---LLSEL----EDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV 218 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~---~~~~l----~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (269)
..++||+|++|...+.. ...+. ...++++.+++.|||||.|++..+.... ...+.+.+++.
T Consensus 120 ~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~------------~~~l~~~l~~~ 187 (290)
T 2xyq_A 120 TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW------------NADLYKLMGHF 187 (290)
T ss_dssp CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC------------CHHHHHHHTTE
T ss_pred ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC------------HHHHHHHHHHc
Confidence 45789999998653211 01111 1247899999999999999998765421 12455666666
Q ss_pred -hcCceEEEEc-CCCCceEEEEec
Q 035593 219 -FGKKLYVLSL-GNRKDDSLIALT 240 (269)
Q Consensus 219 -F~~~v~~~~~-~~~~n~v~~~~~ 240 (269)
|. .+..... ..+...++++..
T Consensus 188 GF~-~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 188 SWW-TAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp EEE-EEEEEGGGTTSSCEEEEEEE
T ss_pred CCc-EEEEEEcCCCchheEEecCC
Confidence 64 3444321 233344555543
No 239
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.10 E-value=5.2e-10 Score=102.94 Aligned_cols=100 Identities=20% Similarity=0.253 Sum_probs=79.9
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..+. -. ++++.+|+.++... +||+|+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ng-----l~-v~~~~~d~~~~~~~-~fD~Vv 358 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINN-----VD-AEFEVASDREVSVK-GFDTVI 358 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-----CC-EEEEECCTTTCCCT-TCSEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC-----Cc-EEEEECChHHcCcc-CCCEEE
Confidence 456789999999999999999884 5699999999999999999875432 23 99999999987333 899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+|..... ...++++.+. .|+|+|++.+.+
T Consensus 359 ~dPPr~g------~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRAG------LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTTC------SCHHHHHHHH-HHCCSEEEEEES
T ss_pred EcCCccc------hHHHHHHHHH-hcCCCcEEEEEC
Confidence 9864321 1346777775 499999998876
No 240
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.10 E-value=1.7e-10 Score=104.12 Aligned_cols=97 Identities=16% Similarity=0.256 Sum_probs=77.6
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|..+..+++++|+.+++++|+ |.+++.|++. ++++++.+|+.+. .+. ||+|+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~~-~~~-~D~v~ 272 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----------SGIEHVGGDMFAS-VPQ-GDAMI 272 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTTC-CCC-EEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----------CCCEEEeCCcccC-CCC-CCEEE
Confidence 45678999999999999999999999999999999 9999877642 3699999999773 233 99999
Q ss_pred EcCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEEEe
Q 035593 155 VDLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+...- .++.. ..+++++++.|+|||.+++.-
T Consensus 273 ~~~~l-----h~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 273 LKAVC-----HNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EESSG-----GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eeccc-----ccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 74321 12222 389999999999999988763
No 241
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.09 E-value=7.1e-10 Score=96.43 Aligned_cols=111 Identities=14% Similarity=0.095 Sum_probs=77.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEEC-ChHHHHHHHHhc-----CccccccCCCCcEEEEEcccccc----
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWEL-DPSVIKVAREFF-----ALEKLEKSYPDRLFVYVGNALKA---- 144 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEi-dp~~~~~a~~~~-----~~~~~~~~~~~rv~~~~~D~~~~---- 144 (269)
..++.+|||||||+|.++..+++. ...+|+++|+ ++.+++.|+++. ..........++++++..|..+.
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 346789999999999999988874 3449999999 899999999987 22110000014688886664432
Q ss_pred c---cCCCeeEEEE-cCCCCCCCCCCCCcHHHHHHHHhhcc---C--CcEEEEEec
Q 035593 145 S---LKDGFSGILV-DLFSKGSLLSELEDPNTWEKLRQCLR---K--GGRIMVNVG 191 (269)
Q Consensus 145 ~---~~~~yD~I~~-d~~~~~~~~~~l~~~e~~~~~~~~L~---p--gG~l~~~~~ 191 (269)
. ..++||+|++ |+... .-....+++.+++.|+ | ||++++.+.
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~-----~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSF-----HQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSC-----GGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred HhhccCCCCCEEEEeCcccC-----hHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 1 3578999986 43321 1114689999999999 9 998776543
No 242
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.09 E-value=2.3e-10 Score=103.21 Aligned_cols=101 Identities=19% Similarity=0.227 Sum_probs=77.6
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|..+..+++.+|+.+++++|+ |.+++.|++ .++++++.+|+.+- .+.. |+|+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~D~~~~-~p~~-D~v~ 264 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ-----------FPGVTHVGGDMFKE-VPSG-DTIL 264 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTC-CCCC-SEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh-----------cCCeEEEeCCcCCC-CCCC-CEEE
Confidence 45678999999999999999999999999999999 998877653 25799999999873 2233 9998
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+...-+. .+. -....++++++++|+|||.+++.-.
T Consensus 265 ~~~vlh~-~~d-~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 265 MKWILHD-WSD-QHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp EESCGGG-SCH-HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ehHHhcc-CCH-HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 7432211 000 0124789999999999999988654
No 243
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.09 E-value=2.2e-10 Score=102.60 Aligned_cols=98 Identities=15% Similarity=0.253 Sum_probs=77.6
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|..+..+++++|+.+++++|+ |.+++.|++. ++++++.+|+.+. .+ .||+|+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~~-~p-~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-----------NNLTYVGGDMFTS-IP-NADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-----------TTEEEEECCTTTC-CC-CCSEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-----------CCcEEEeccccCC-CC-CccEEE
Confidence 34578999999999999999999999999999999 9999887652 2499999998763 22 499999
Q ss_pred EcCCCCCCCCCCCCc---HHHHHHHHhhccC---CcEEEEEec
Q 035593 155 VDLFSKGSLLSELED---PNTWEKLRQCLRK---GGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~---~e~~~~~~~~L~p---gG~l~~~~~ 191 (269)
+...-+ ++.. ..+++++++.|+| ||.+++...
T Consensus 252 ~~~~lh-----~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 252 LKYILH-----NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EESCGG-----GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred eehhhc-----cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 743211 1212 3899999999999 999887653
No 244
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.08 E-value=2.5e-10 Score=103.10 Aligned_cols=101 Identities=19% Similarity=0.229 Sum_probs=77.1
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+..+|||||||+|..+..+++.+|+.+++++|+ |.+++.|++ .++++++.+|+.+-.+ .. |+|+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~p-~~-D~v~ 266 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA-----------FSGVEHLGGDMFDGVP-KG-DAIF 266 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCCC-CC-SEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh-----------cCCCEEEecCCCCCCC-CC-CEEE
Confidence 44578999999999999999999999999999999 999877653 2579999999986322 23 9998
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+...-+. .+. -....++++++++|+|||.+++.-.
T Consensus 267 ~~~vlh~-~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 267 IKWICHD-WSD-EHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp EESCGGG-BCH-HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred Eechhhc-CCH-HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 7432211 000 0124789999999999999888654
No 245
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.07 E-value=6.8e-10 Score=96.85 Aligned_cols=87 Identities=21% Similarity=0.292 Sum_probs=67.0
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
..+.++....+.+..+|||||||+|.++..+++. +.+|++||+|+.+++.+++++.... ..++++++.+|+.++
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTP----VASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTST----TGGGEEEEESCTTTS
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcC----CCCceEEEEcceecc
Confidence 3444443323457889999999999999999986 4699999999999999999874321 025799999999876
Q ss_pred ccCCCeeEEEEcCC
Q 035593 145 SLKDGFSGILVDLF 158 (269)
Q Consensus 145 ~~~~~yD~I~~d~~ 158 (269)
.. ..||+|++++.
T Consensus 90 ~~-~~fD~vv~nlp 102 (285)
T 1zq9_A 90 DL-PFFDTCVANLP 102 (285)
T ss_dssp CC-CCCSEEEEECC
T ss_pred cc-hhhcEEEEecC
Confidence 32 27999998653
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.07 E-value=8.7e-10 Score=93.27 Aligned_cols=103 Identities=15% Similarity=0.046 Sum_probs=77.9
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.++.+|||||||.|.++..+. +..+++++|||+.+++.+++++... ..+.++.++|...-..+++||+|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~------g~~~~~~v~D~~~~~~~~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK------DWDFTFALQDVLCAPPAEAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT------TCEEEEEECCTTTSCCCCBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc------CCCceEEEeecccCCCCCCcchHHH
Confidence 568999999999999999876 7899999999999999999997543 3678999999987766779999986
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
...-+ ...+......+ ++.+.|+++|+++ ++.
T Consensus 175 lk~lh--~LE~q~~~~~~-~ll~aL~~~~vvV-sfP 206 (253)
T 3frh_A 175 FKLLP--LLEREQAGSAM-ALLQSLNTPRMAV-SFP 206 (253)
T ss_dssp ESCHH--HHHHHSTTHHH-HHHHHCBCSEEEE-EEE
T ss_pred HHHHH--HhhhhchhhHH-HHHHHhcCCCEEE-EcC
Confidence 42111 01111123445 7778999987664 443
No 247
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.07 E-value=1.6e-10 Score=98.74 Aligned_cols=102 Identities=17% Similarity=0.174 Sum_probs=81.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.++.+|||||||.|-++..+....|..+++++|||+.+++++++++... ..+.++.+.|...-..+++||+|+
T Consensus 130 i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~------g~~~~~~v~D~~~~~p~~~~DvaL 203 (281)
T 3lcv_B 130 LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL------NVPHRTNVADLLEDRLDEPADVTL 203 (281)
T ss_dssp SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT------TCCEEEEECCTTTSCCCSCCSEEE
T ss_pred cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc------CCCceEEEeeecccCCCCCcchHH
Confidence 34688999999999999999988778999999999999999999998543 245888999987777788999998
Q ss_pred EcCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEE
Q 035593 155 VDLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~ 188 (269)
+.. ..++|.. ...| ++.+.|+++|+++-
T Consensus 204 ~lk-----ti~~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 204 LLK-----TLPCLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp ETT-----CHHHHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred HHH-----HHHHhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 742 1222211 2456 89999999888764
No 248
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.06 E-value=4.8e-10 Score=94.98 Aligned_cols=106 Identities=13% Similarity=0.038 Sum_probs=71.3
Q ss_pred HHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc-ccccc-
Q 035593 67 DAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG-NALKA- 144 (269)
Q Consensus 67 ~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~-D~~~~- 144 (269)
+.+..+..-.++.+|||||||+|.++..+++. ...+|++||+++.|++.|++... ++..... +.+..
T Consensus 27 ~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~----------~~~~~~~~~~~~~~ 95 (232)
T 3opn_A 27 KALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDE----------RVVVMEQFNFRNAV 95 (232)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCT----------TEEEECSCCGGGCC
T ss_pred HHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCc----------cccccccceEEEeC
Confidence 33434433234679999999999999999985 33599999999999999887532 2332211 22211
Q ss_pred ---ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 145 ---SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 145 ---~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.....||.+.+|..-.. ...+++++++.|||||.+++.+
T Consensus 96 ~~~~~~~~~d~~~~D~v~~~-------l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 96 LADFEQGRPSFTSIDVSFIS-------LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GGGCCSCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEEE
T ss_pred HhHcCcCCCCEEEEEEEhhh-------HHHHHHHHHHhccCCCEEEEEE
Confidence 11123677766643211 2679999999999999998864
No 249
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.06 E-value=3.4e-10 Score=103.49 Aligned_cols=114 Identities=18% Similarity=0.083 Sum_probs=83.6
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK 143 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~ 143 (269)
..+.|+......++.+|||+|||+|.++..+++++ +..+|+++|+|+.+++.| .+++++++|+.+
T Consensus 27 l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~~~~~~~D~~~ 92 (421)
T 2ih2_A 27 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PWAEGILADFLL 92 (421)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TTEEEEESCGGG
T ss_pred HHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CCCcEEeCChhh
Confidence 34445432222346799999999999999999876 578999999999998766 258999999998
Q ss_pred cccCCCeeEEEEcCCCCCCCC-CC----C--------------------CcHHHHHHHHhhccCCcEEEEEecC
Q 035593 144 ASLKDGFSGILVDLFSKGSLL-SE----L--------------------EDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 144 ~~~~~~yD~I~~d~~~~~~~~-~~----l--------------------~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+...++||+|+++.+-..... .+ + ....|++.+.+.|+|||.+++-+..
T Consensus 93 ~~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 93 WEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CCCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cCccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 855678999999743221100 00 1 0127899999999999999887754
No 250
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.05 E-value=1e-09 Score=99.72 Aligned_cols=124 Identities=11% Similarity=0.039 Sum_probs=89.2
Q ss_pred hHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCC--------------------------------------ceEE
Q 035593 64 TYFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPE--------------------------------------AVIH 105 (269)
Q Consensus 64 ~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~--------------------------------------~~v~ 105 (269)
.....|+.+....+...+||.+||+|+++.+++....+ .+|+
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 34444543334557789999999999999888764333 5699
Q ss_pred EEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccC--C
Q 035593 106 GWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRK--G 183 (269)
Q Consensus 106 ~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~p--g 183 (269)
++|+|+.+++.|+++....+ ...+++++++|+.++....+||+|++|.+-.......-...++|+.+.+.|++ |
T Consensus 261 GvDid~~al~~Ar~Na~~~g----l~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVG----LEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTT----CTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred EEECCHHHHHHHHHHHHHcC----CCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999874332 13479999999999855569999999865332222111235788888888877 8
Q ss_pred cEEEEEec
Q 035593 184 GRIMVNVG 191 (269)
Q Consensus 184 G~l~~~~~ 191 (269)
|.+.+-..
T Consensus 337 ~~~~iit~ 344 (384)
T 3ldg_A 337 WSQFILTN 344 (384)
T ss_dssp SEEEEEES
T ss_pred cEEEEEEC
Confidence 88777654
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.04 E-value=1.2e-09 Score=95.83 Aligned_cols=84 Identities=17% Similarity=0.193 Sum_probs=68.4
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
..+.|+....+.+..+|||||||+|.++..+++. +.+|++||+|+.+++.+++++. . .++++++++|+.++
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~--~-----~~~v~vi~gD~l~~ 108 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE--L-----YNNIEIIWGDALKV 108 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH--H-----CSSEEEEESCTTTS
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc--c-----CCCeEEEECchhhC
Confidence 4455544334567889999999999999999986 6799999999999999999875 1 35799999999987
Q ss_pred -ccCCCeeEEEEcC
Q 035593 145 -SLKDGFSGILVDL 157 (269)
Q Consensus 145 -~~~~~yD~I~~d~ 157 (269)
.....||+|+.++
T Consensus 109 ~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 109 DLNKLDFNKVVANL 122 (295)
T ss_dssp CGGGSCCSEEEEEC
T ss_pred CcccCCccEEEEeC
Confidence 4445799999764
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.04 E-value=1e-09 Score=101.17 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=79.0
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c----cCCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S----LKDG 149 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~----~~~~ 149 (269)
+.+..+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..+. -.+++++.+|+.+. . ..++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~-----~~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNG-----LQNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCTTSCCSSSGGGTTC
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcC-----CCceEEEECCHHHHhhhhhhhcCC
Confidence 345789999999999999999984 6799999999999999999875432 24799999999885 1 3468
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
||+|++|..-.. ..++++.+.+ ++|++++.+.+
T Consensus 357 fD~Vv~dPPr~g-------~~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 357 FDKVLLDPARAG-------AAGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CSEEEECCCTTC-------CHHHHHHHHH-HCCSEEEEEES
T ss_pred CCEEEECCCCcc-------HHHHHHHHHh-cCCCeEEEEEC
Confidence 999999754321 2466666654 78988887765
No 253
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.04 E-value=5.3e-10 Score=101.66 Aligned_cols=124 Identities=18% Similarity=0.135 Sum_probs=88.0
Q ss_pred hHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCC--------------------------------------ceEE
Q 035593 64 TYFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPE--------------------------------------AVIH 105 (269)
Q Consensus 64 ~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~--------------------------------------~~v~ 105 (269)
.....|+......+..+|||+|||+|.++..++....+ .+|+
T Consensus 182 ~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 34445544444557889999999999999888765322 5799
Q ss_pred EEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccC--C
Q 035593 106 GWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRK--G 183 (269)
Q Consensus 106 ~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~p--g 183 (269)
++|+|+.+++.|++++..... ..++++.++|+.++..+.+||+|++|.+-.......-...++|+.+.+.|++ |
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl----~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g 337 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGV----DEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKN 337 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTC----GGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBS
T ss_pred EEECCHHHHHHHHHHHHHcCC----CCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCC
Confidence 999999999999998753321 2479999999999855679999999854321111011124688888888877 7
Q ss_pred cEEEEEec
Q 035593 184 GRIMVNVG 191 (269)
Q Consensus 184 G~l~~~~~ 191 (269)
|.+.+-..
T Consensus 338 ~~~~iit~ 345 (385)
T 3ldu_A 338 WSYYLITS 345 (385)
T ss_dssp CEEEEEES
T ss_pred CEEEEEEC
Confidence 77766554
No 254
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.03 E-value=3.1e-10 Score=101.53 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=84.2
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCC-----ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPE-----AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~-----~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD 151 (269)
+..+|||+|||+|.++..+++..+. .+++++|+|+.++++|+.++.... .+++++++|+......++||
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g------~~~~i~~~D~l~~~~~~~fD 203 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR------QKMTLLHQDGLANLLVDPVD 203 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT------CCCEEEESCTTSCCCCCCEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC------CCceEEECCCCCccccCCcc
Confidence 4579999999999999999887653 799999999999999999865432 25899999987754457899
Q ss_pred EEEEcCCCCCCC------------CCCC--CcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 152 GILVDLFSKGSL------------LSEL--EDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 152 ~I~~d~~~~~~~------------~~~l--~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
+|+++.+-+... .... ....|++.+.+.|+|||++++-+.+.
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 999986421100 0000 11368999999999999998877443
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.01 E-value=6.5e-10 Score=101.30 Aligned_cols=123 Identities=13% Similarity=0.074 Sum_probs=86.4
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCC--------------------------------------ceEEE
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPE--------------------------------------AVIHG 106 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~--------------------------------------~~v~~ 106 (269)
....|+.+....+...|||.+||+|+++.+++....+ .+|++
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 3344443334456789999999999999888764332 56999
Q ss_pred EECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccC--Cc
Q 035593 107 WELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRK--GG 184 (269)
Q Consensus 107 vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~p--gG 184 (269)
+|+|+.+++.|+++..... ...+++++++|+.++....+||+|++|.+-.......-...++|+.+.+.|++ ||
T Consensus 269 vDid~~al~~Ar~Na~~~g----l~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~ 344 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAG----LGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTW 344 (393)
T ss_dssp EESCHHHHHHHHHHHHHTT----CTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred EECCHHHHHHHHHHHHHcC----CCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCC
Confidence 9999999999999875332 13469999999999855569999999854321111001124678877777776 88
Q ss_pred EEEEEec
Q 035593 185 RIMVNVG 191 (269)
Q Consensus 185 ~l~~~~~ 191 (269)
.+.+-..
T Consensus 345 ~~~iit~ 351 (393)
T 3k0b_A 345 SVYVLTS 351 (393)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 7777554
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.98 E-value=9.6e-10 Score=101.74 Aligned_cols=112 Identities=19% Similarity=0.171 Sum_probs=82.5
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC-------------CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc
Q 035593 77 PPGPIGILGFGAGSAARLILDLY-------------PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK 143 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~-------------p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~ 143 (269)
+..+|||.|||+|.++..+.++. +..+++++|+|+.++++|+.++.+... ...+++++++|...
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~---~~~~~~i~~gD~l~ 247 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI---GTDRSPIVCEDSLE 247 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC---CSSCCSEEECCTTT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC---CcCCCCEeeCCCCC
Confidence 46799999999999998888753 346899999999999999987644321 01257899999887
Q ss_pred cccCCCeeEEEEcCCCCCCC-CC-C-----C------CcHHHHHHHHhhccCCcEEEEEec
Q 035593 144 ASLKDGFSGILVDLFSKGSL-LS-E-----L------EDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 144 ~~~~~~yD~I~~d~~~~~~~-~~-~-----l------~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
.....+||+|+.+.+-.... .. . + ....|++.+.+.|+|||.+++-+.
T Consensus 248 ~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 248 KEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp SCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 74445899999985322111 00 0 0 014899999999999999988763
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.97 E-value=8.5e-10 Score=99.70 Aligned_cols=99 Identities=15% Similarity=0.030 Sum_probs=75.0
Q ss_pred CCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c--cC-------
Q 035593 78 PGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S--LK------- 147 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~--~~------- 147 (269)
+.+|||+|||+|.++..+++. ..+|++||+++.+++.|++++..+. -++++++.+|+.++ . ..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng-----~~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANH-----IDNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTT-----CCSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEECCHHHHHHHHhhccccccc
Confidence 578999999999999998873 4699999999999999999875443 24799999999876 1 11
Q ss_pred -------CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 148 -------DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 148 -------~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
.+||+|++|.+... +...+.+.|+++|.+++...++
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~g----------~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRSG----------LDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTTC----------CCHHHHHHHTTSSEEEEEESCH
T ss_pred cccccccCCCCEEEECcCccc----------cHHHHHHHHhCCCEEEEEECCH
Confidence 37999999854321 2234555566888887766554
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.97 E-value=3.4e-09 Score=91.74 Aligned_cols=83 Identities=18% Similarity=0.117 Sum_probs=65.4
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
..+.++....+.+. +|||||||+|.++..+++. +.+|++||+|+++++.+++++. ..+++++++|+.++
T Consensus 35 i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~--------~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 35 HLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLS--------GLPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTT--------TSSEEEEESCGGGS
T ss_pred HHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcC--------CCCEEEEECChhhC
Confidence 34444433234567 9999999999999999985 4799999999999999999875 24799999999987
Q ss_pred c--cCCCeeEEEEcCC
Q 035593 145 S--LKDGFSGILVDLF 158 (269)
Q Consensus 145 ~--~~~~yD~I~~d~~ 158 (269)
. ....+|.|+.+++
T Consensus 104 ~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 104 PWEEVPQGSLLVANLP 119 (271)
T ss_dssp CGGGSCTTEEEEEEEC
T ss_pred ChhhccCccEEEecCc
Confidence 2 2236899998753
No 259
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.95 E-value=5.7e-09 Score=86.41 Aligned_cols=87 Identities=16% Similarity=0.105 Sum_probs=68.3
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
.++.+|||||||+|.++..+ ..+++++|+++. +++++.+|+.+. ...++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~--------------------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI-----RNPVHCFDLASL--------------------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC-----CSCEEEEESSCS--------------------STTEEESCTTSCSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHh-----hccEEEEeCCCC--------------------CceEEEeccccCCCCCCCEeEEE
Confidence 46789999999999998876 368999999986 145677888776 4567899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+...-+ +.....+++.+++.|+|||.+++..+.
T Consensus 121 ~~~~l~-----~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 121 FCLSLM-----GTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp EESCCC-----SSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred Eehhcc-----ccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 753322 223579999999999999999987643
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.95 E-value=1.2e-08 Score=89.97 Aligned_cols=114 Identities=14% Similarity=0.066 Sum_probs=83.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccccc----CCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASL----KDG 149 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~----~~~ 149 (269)
..+..+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++.... -.+++++.+|+.++.. ..+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-----~~~v~~~~~D~~~~~~~~~~~~~ 174 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-----VSCCELAEEDFLAVSPSDPRYHE 174 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCGGGSCTTCGGGTT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCeEEEEeCChHhcCccccccCC
Confidence 3567899999999999999999865 45799999999999999999874222 2469999999988721 257
Q ss_pred eeEEEEcCCCCC-CCC---CCC----------------CcHHHHHHHHhhccCCcEEEEEecCCC
Q 035593 150 FSGILVDLFSKG-SLL---SEL----------------EDPNTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 150 yD~I~~d~~~~~-~~~---~~l----------------~~~e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
||.|++|+.-.. +.. +.. ...++++.+.+.|+ ||+++....+..
T Consensus 175 fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 175 VHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp EEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred CCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 999999975431 111 000 01246777777776 999998776653
No 261
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.92 E-value=5.8e-09 Score=91.30 Aligned_cols=144 Identities=18% Similarity=0.142 Sum_probs=91.6
Q ss_pred CCcEEEEcCcccHHHHHH----HHHCCCc--eEEEEECChH---------HHHHHHHhcC-ccccccCCCCcEEEEEccc
Q 035593 78 PGPIGILGFGAGSAARLI----LDLYPEA--VIHGWELDPS---------VIKVAREFFA-LEKLEKSYPDRLFVYVGNA 141 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l----~~~~p~~--~v~~vEidp~---------~~~~a~~~~~-~~~~~~~~~~rv~~~~~D~ 141 (269)
.-+|||+|.|+|...... .+..|.. +++.+|.+|. ..++.+.... .+.+. ...-.++++.+|+
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~-~~~v~L~l~~GDa 175 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYE-GERLSLKVLLGDA 175 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEE-CSSEEEEEEESCH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcccc-CCcEEEEEEechH
Confidence 457999999999876433 2345655 5566665431 1122221111 11100 0122467889999
Q ss_pred ccc--c-cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH
Q 035593 142 LKA--S-LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV 218 (269)
Q Consensus 142 ~~~--~-~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (269)
++. . ...++|+|+.|+|++ ...|.++++++|+.++++++|||+++..+.. ..+.+.|+++
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP-~kNPeLWs~e~f~~l~~~~~pgg~laTYtaa----------------g~VRR~L~~a 238 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSP-YKNPELWTLDFLSLIKERIDEKGYWVSYSSS----------------LSVRKSLLTL 238 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCT-TTSGGGGSHHHHHHHHTTEEEEEEEEESCCC----------------HHHHHHHHHT
T ss_pred HHHHhhhcccceeEEEeCCCCc-ccCcccCCHHHHHHHHHHhCCCcEEEEEeCc----------------HHHHHHHHHC
Confidence 886 2 345899999999987 4678899999999999999999999975532 1344556665
Q ss_pred -hcCceEEEEcCCCCceEEEEecC
Q 035593 219 -FGKKLYVLSLGNRKDDSLIALTG 241 (269)
Q Consensus 219 -F~~~v~~~~~~~~~n~v~~~~~~ 241 (269)
| .|.-.+-....-.+++|+..
T Consensus 239 GF--~V~k~~G~g~KReml~A~~~ 260 (308)
T 3vyw_A 239 GF--KVGSSREIGRKRKGTVASLK 260 (308)
T ss_dssp TC--EEEEEECC---CEEEEEESS
T ss_pred CC--EEEecCCCCCCCceeEEecC
Confidence 5 46666654555677888754
No 262
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.92 E-value=2.1e-09 Score=94.45 Aligned_cols=78 Identities=27% Similarity=0.298 Sum_probs=66.2
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc---c---CC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS---L---KD 148 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~---~---~~ 148 (269)
+.+..+|||+|||+|..+..+++++|+.+|+++|+|+.+++.|++++... ..+++++++|+.++. . ..
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~------g~~v~~v~~d~~~l~~~l~~~g~~ 97 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF------SDRVSLFKVSYREADFLLKTLGIE 97 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG------TTTEEEEECCGGGHHHHHHHTTCS
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEECCHHHHHHHHHhcCCC
Confidence 45678999999999999999999888889999999999999999987532 258999999988751 1 15
Q ss_pred CeeEEEEcCC
Q 035593 149 GFSGILVDLF 158 (269)
Q Consensus 149 ~yD~I~~d~~ 158 (269)
+||.|++|+.
T Consensus 98 ~~D~Vl~D~g 107 (301)
T 1m6y_A 98 KVDGILMDLG 107 (301)
T ss_dssp CEEEEEEECS
T ss_pred CCCEEEEcCc
Confidence 8999999863
No 263
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.92 E-value=1.8e-09 Score=94.86 Aligned_cols=85 Identities=20% Similarity=0.269 Sum_probs=62.1
Q ss_pred HHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc
Q 035593 66 FDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS 145 (269)
Q Consensus 66 ~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~ 145 (269)
.+.++....+.+..+|||||||+|.++..+++. +.+|++||+|+.+++.|++++.... .++++++.+|+..+.
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~-----~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG-----YNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT-----CCCEEC----CCSSC
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEECchhhCC
Confidence 344432223456789999999999999999874 5799999999999999999864221 257999999998873
Q ss_pred cCCCeeEEEEcCC
Q 035593 146 LKDGFSGILVDLF 158 (269)
Q Consensus 146 ~~~~yD~I~~d~~ 158 (269)
. .+||+|++++.
T Consensus 104 ~-~~~D~Vv~n~p 115 (299)
T 2h1r_A 104 F-PKFDVCTANIP 115 (299)
T ss_dssp C-CCCSEEEEECC
T ss_pred c-ccCCEEEEcCC
Confidence 3 38999998753
No 264
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.92 E-value=1.6e-08 Score=86.15 Aligned_cols=83 Identities=16% Similarity=0.153 Sum_probs=64.5
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
..+.++....+.+..+|||||||+|.++..++++. .+|++||+|+.+++.+++++.. .++++++++|+.++
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~-------~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD-------HDNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT-------CCSEEEECCCGGGC
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc-------CCCeEEEEChHHhC
Confidence 45555544445578899999999999999999863 7999999999999999998752 25799999999987
Q ss_pred -cc-CCCeeEEEEcC
Q 035593 145 -SL-KDGFSGILVDL 157 (269)
Q Consensus 145 -~~-~~~yD~I~~d~ 157 (269)
.. ...| .|++++
T Consensus 89 ~~~~~~~~-~vv~nl 102 (244)
T 1qam_A 89 KFPKNQSY-KIFGNI 102 (244)
T ss_dssp CCCSSCCC-EEEEEC
T ss_pred CcccCCCe-EEEEeC
Confidence 22 3456 455553
No 265
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.91 E-value=1.4e-09 Score=97.52 Aligned_cols=98 Identities=14% Similarity=0.265 Sum_probs=75.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
+..+|||||||+|..+..+++++|+.+++++|+ |.+++.|++. ++++++.+|+.+ ..+ .||+|++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~-~~~-~~D~v~~~ 258 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-----------ENLNFVGGDMFK-SIP-SADAVLLK 258 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-----------SSEEEEECCTTT-CCC-CCSEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-----------CCcEEEeCccCC-CCC-CceEEEEc
Confidence 568999999999999999999999999999999 8888776541 359999999876 222 59999975
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccC---CcEEEEEe
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRK---GGRIMVNV 190 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~p---gG~l~~~~ 190 (269)
..-+. .+. .....+++++++.|+| ||.+++.-
T Consensus 259 ~vlh~-~~d-~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 259 WVLHD-WND-EQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCGGG-SCH-HHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred ccccC-CCH-HHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 32211 110 0123899999999999 99888754
No 266
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.89 E-value=2.6e-09 Score=101.76 Aligned_cols=101 Identities=16% Similarity=0.088 Sum_probs=74.1
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---ccCCCeeE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---SLKDGFSG 152 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---~~~~~yD~ 152 (269)
..+.+|||||||+|.++..|++ -+++|++||+++.+++.|+.++...+ .-++++.++|+.++ ..+++||+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~--~ga~V~giD~~~~~i~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~fD~ 137 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLAS--KGATIVGIDFQQENINVCRALAEENP-----DFAAEFRVGRIEEVIAALEEGEFDL 137 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTST-----TSEEEEEECCHHHHHHHCCTTSCSE
T ss_pred CCCCeEEEECCCCcHHHHHHHh--CCCEEEEECCCHHHHHHHHHHHHhcC-----CCceEEEECCHHHHhhhccCCCccE
Confidence 3577999999999999999998 48899999999999999999874332 23699999999987 34678999
Q ss_pred EEEcCCCCCCCCCCCCc---HHHHHHHHhhccCCcEEEE
Q 035593 153 ILVDLFSKGSLLSELED---PNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~---~e~~~~~~~~L~pgG~l~~ 188 (269)
|++- .+..|+.. ......+.+.|+++|...+
T Consensus 138 v~~~-----e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 138 AIGL-----SVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp EEEE-----SCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred EEEC-----cchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 9863 12222211 2233456667777764433
No 267
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.86 E-value=6e-09 Score=89.47 Aligned_cols=83 Identities=12% Similarity=0.187 Sum_probs=64.3
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
..+.++....+.+..+|||||||+|.++..+++. +.+|++||+|+.+++.+++++.. .++++++++|+.++
T Consensus 17 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~-------~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 17 VLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ-------QKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT-------CTTEEEEESCTTTC
T ss_pred HHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh-------CCCcEEEEcchHhC
Confidence 3444443324457789999999999999999984 47999999999999999998752 25799999999987
Q ss_pred c--c---CCCeeEEEEcC
Q 035593 145 S--L---KDGFSGILVDL 157 (269)
Q Consensus 145 ~--~---~~~yD~I~~d~ 157 (269)
. . .++|| |+.++
T Consensus 88 ~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 88 DFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp CGGGSCCSSCEE-EEEEC
T ss_pred CHHHhccCCCeE-EEecC
Confidence 1 1 35788 65543
No 268
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.81 E-value=4.1e-09 Score=84.69 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=68.3
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c---cCCCe
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S---LKDGF 150 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~---~~~~y 150 (269)
+.+..+||+||||. +.+|+++.|++.|++++. .+++++++|+.+. . .+++|
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~---------~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG---------NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT---------TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc---------cCcEEEEechhcCccccCCCCCE
Confidence 56789999999985 239999999999999863 2489999999887 3 57789
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|+|++...-+ ...+ ...++++++++.|||||.+++.
T Consensus 65 D~V~~~~~l~-~~~~--~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 65 DIILSGLVPG-STTL--HSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEEEECCSTT-CCCC--CCHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECChhh-hccc--CHHHHHHHHHHHCCCCEEEEEE
Confidence 9999743222 1111 2479999999999999999985
No 269
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.80 E-value=5.1e-11 Score=101.57 Aligned_cols=115 Identities=12% Similarity=0.115 Sum_probs=78.9
Q ss_pred HHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc
Q 035593 66 FDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS 145 (269)
Q Consensus 66 ~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~ 145 (269)
.+.+.....+.+..+|||||||+|.++..+++. +.+|+++|+|+.+++.|++++.. .++++++++|+.++.
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~~-------~~~v~~~~~D~~~~~ 88 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLKL-------NTRVTLIHQDILQFQ 88 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTTT-------CSEEEECCSCCTTTT
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECChhhcC
Confidence 344433323456789999999999999999986 37999999999999999887641 357999999999872
Q ss_pred -c-CCCeeEEEEcCCCCCCCC------C-CCCcHHHH----HHHHhhccCCcEEEEEe
Q 035593 146 -L-KDGFSGILVDLFSKGSLL------S-ELEDPNTW----EKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 146 -~-~~~yD~I~~d~~~~~~~~------~-~l~~~e~~----~~~~~~L~pgG~l~~~~ 190 (269)
. .++| .|+++++-....+ . ......++ +.+.+.|+|||.+++..
T Consensus 89 ~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 89 FPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 2 3578 6766643221100 0 00112333 66778888888776644
No 270
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.80 E-value=7.7e-09 Score=98.98 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=77.4
Q ss_pred CCcEEEEcCcccHHHHHHHHH---CC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEE
Q 035593 78 PGPIGILGFGAGSAARLILDL---YP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGI 153 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~---~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I 153 (269)
...|||+|||+|.+....++. .. ..+|.+||.+| ++..|++....+.| +.+|+++.+|++++..+++.|+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~----~dkVtVI~gd~eev~LPEKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW----GSQVTVVSSDMREWVAPEKADII 432 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT----GGGEEEEESCTTTCCCSSCEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC----CCeEEEEeCcceeccCCcccCEE
Confidence 356999999999996554443 21 34899999998 66777776654544 46899999999999888999999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEE
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIM 187 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~ 187 (269)
++...... ...+. ..+.+....+.|||||+++
T Consensus 433 VSEwMG~f-Ll~E~-mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 433 VSELLGSF-ADNEL-SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ECCCCBTT-BGGGC-HHHHHHHHGGGEEEEEEEE
T ss_pred EEEcCccc-ccccC-CHHHHHHHHHhcCCCcEEc
Confidence 98766432 22232 3578888889999999875
No 271
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.79 E-value=1.1e-08 Score=87.86 Aligned_cols=136 Identities=13% Similarity=0.102 Sum_probs=89.2
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.+..+|||||||.|.++..++++.+...+.++++.-.+... .... .....++..+.+++... ..+++||+
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~-----pi~~--~~~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEK-----PMNV--QSLGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCC-----CCCC--CBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccc-----cccc--CcCCCCeEEEeccceehhcCCCCccE
Confidence 4667789999999999999998875555588888887432100 0000 00011344455554323 44678999
Q ss_pred EEEcCCCCCCCC--CCCCcHHHHHHHHhhccCC-cEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEE
Q 035593 153 ILVDLFSKGSLL--SELEDPNTWEKLRQCLRKG-GRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLS 227 (269)
Q Consensus 153 I~~d~~~~~~~~--~~l~~~e~~~~~~~~L~pg-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~ 227 (269)
|++|.....+.. .+..+...++.+.+.|+|| |.|++-++.++- .....+++.|++.|. .+...+
T Consensus 144 VlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg----------~~~~~l~~~lk~~F~-~V~~~K 210 (277)
T 3evf_A 144 LLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYM----------PDVLEKLELLQRRFG-GTVIRN 210 (277)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTS----------HHHHHHHHHHHHHHC-CEEECC
T ss_pred EEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCC----------ccHHHHHHHHHHhcC-CEEEEe
Confidence 999975441111 1222234578889999999 999999987531 236688999999996 676664
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.78 E-value=4.4e-08 Score=83.74 Aligned_cols=82 Identities=20% Similarity=0.234 Sum_probs=62.6
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
..+.+.....+.+..+|||||||+|.++..+++. +..+|++||+|+.+++.++++ . ..+++++++|+.++
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~--------~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G--------DERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C--------CTTEEEECSCTTTC
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c--------CCCeEEEEcchhhC
Confidence 4455543334557889999999999999999984 457999999999999999887 3 35799999999987
Q ss_pred ccC---CCeeEEEEcC
Q 035593 145 SLK---DGFSGILVDL 157 (269)
Q Consensus 145 ~~~---~~yD~I~~d~ 157 (269)
... ..| .|+.++
T Consensus 89 ~~~~~~~~~-~vv~Nl 103 (249)
T 3ftd_A 89 PFCSLGKEL-KVVGNL 103 (249)
T ss_dssp CGGGSCSSE-EEEEEC
T ss_pred ChhHccCCc-EEEEEC
Confidence 211 234 666654
No 273
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.76 E-value=7.2e-09 Score=94.52 Aligned_cols=75 Identities=15% Similarity=-0.040 Sum_probs=63.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCcc--ccccCCCCcEEEEEcccccc-c--cCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALE--KLEKSYPDRLFVYVGNALKA-S--LKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~--~~~~~~~~rv~~~~~D~~~~-~--~~~~yD 151 (269)
+..+|||+|||+|..+..+++. +.+|++||+|+.+++.|++++... + -.+++++++|+.++ . ..++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~g-----l~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNE-----GKDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCT-----TCEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccC-----CCcEEEEECcHHHhhhhccCCCce
Confidence 4789999999999999998873 679999999999999999987532 2 24799999999987 2 236899
Q ss_pred EEEEcCC
Q 035593 152 GILVDLF 158 (269)
Q Consensus 152 ~I~~d~~ 158 (269)
+|++|..
T Consensus 166 vV~lDPP 172 (410)
T 3ll7_A 166 YIYVDPA 172 (410)
T ss_dssp EEEECCE
T ss_pred EEEECCC
Confidence 9999964
No 274
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.71 E-value=2.7e-08 Score=86.52 Aligned_cols=71 Identities=21% Similarity=0.223 Sum_probs=56.7
Q ss_pred HHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHCCC--ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccc
Q 035593 65 YFDAFATLPPILPPGPIGILGFGAGSAARLILDLYPE--AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNAL 142 (269)
Q Consensus 65 y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~p~--~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~ 142 (269)
..+.++....+.+..+|||||||+|.++..++++.+. .+|++||+|+.+++.+++++ . ++++++++|+.
T Consensus 30 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~-------~~v~~i~~D~~ 100 (279)
T 3uzu_A 30 VIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G-------ELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G-------GGEEEEESCGG
T ss_pred HHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C-------CCcEEEECChh
Confidence 3444543323457889999999999999999986432 45999999999999999884 2 37999999999
Q ss_pred cc
Q 035593 143 KA 144 (269)
Q Consensus 143 ~~ 144 (269)
++
T Consensus 101 ~~ 102 (279)
T 3uzu_A 101 TF 102 (279)
T ss_dssp GC
T ss_pred cC
Confidence 87
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.70 E-value=7.6e-09 Score=88.95 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=62.3
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECCh-------HHHHHHHHhcCccccccCCCCcEEEEEcccccc-c--
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDP-------SVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S-- 145 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp-------~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~-- 145 (269)
.+..+|||+|||+|..+..+++. +.+|+++|++| .+++.|+++...+.. ..+++++++|+.++ .
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~----~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDT----AARINLHFGNAAEQMPAL 155 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH----HTTEEEEESCHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC----ccCeEEEECCHHHHHHhh
Confidence 35689999999999999999984 67999999999 999999887643321 24699999999986 2
Q ss_pred cC--CCeeEEEEcCC
Q 035593 146 LK--DGFSGILVDLF 158 (269)
Q Consensus 146 ~~--~~yD~I~~d~~ 158 (269)
.. ++||+|++|..
T Consensus 156 ~~~~~~fD~V~~dP~ 170 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPM 170 (258)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred hccCCCccEEEECCC
Confidence 22 68999999864
No 276
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.69 E-value=1.1e-08 Score=87.85 Aligned_cols=136 Identities=14% Similarity=0.060 Sum_probs=89.4
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeE
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~ 152 (269)
.+.+..+|||||||.|.++.++++..+...|.++|+...+...+... . . ...++..+..++... ....++|+
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~-~-----~g~~ii~~~~~~dv~~l~~~~~Dv 159 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-T-T-----LGWNLIRFKDKTDVFNMEVIPGDT 159 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-C-B-----TTGGGEEEECSCCGGGSCCCCCSE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-c-c-----CCCceEEeeCCcchhhcCCCCcCE
Confidence 46678899999999999999988755666899999976432111110 0 0 012333333222212 34578999
Q ss_pred EEEcCCCCCCCC--CCCCcHHHHHHHHhhccCC--cEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEE
Q 035593 153 ILVDLFSKGSLL--SELEDPNTWEKLRQCLRKG--GRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLS 227 (269)
Q Consensus 153 I~~d~~~~~~~~--~~l~~~e~~~~~~~~L~pg--G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~ 227 (269)
|++|.....+.. .+..+.+.++.+.+.|+|| |.|++-++.++- . ....+++.|++.|. .+...+
T Consensus 160 VLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg---------~-~~~~l~~~lk~~F~-~V~~~K 227 (282)
T 3gcz_A 160 LLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYT---------P-LIMEELSRLQLKHG-GGLVRV 227 (282)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCS---------H-HHHHHHHHHHHHHC-CEEECC
T ss_pred EEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCC---------c-cHHHHHHHHHHhcC-CEEEEc
Confidence 999976542221 1222335688888999999 999999987531 2 36688999999996 676664
No 277
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.69 E-value=2.6e-08 Score=94.31 Aligned_cols=116 Identities=16% Similarity=0.060 Sum_probs=81.3
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCC------------------CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEE
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYP------------------EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVY 137 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p------------------~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~ 137 (269)
.+..+|||.+||+|.+...+.+... ..+++++|+|+.++++|+.++.+.......+.+++++
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 3567999999999999988776431 2479999999999999998864432100000137889
Q ss_pred Ecccccc--ccCCCeeEEEEcCCCCCCCCC----------CCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 138 VGNALKA--SLKDGFSGILVDLFSKGSLLS----------ELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 138 ~~D~~~~--~~~~~yD~I~~d~~~~~~~~~----------~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
++|.... ....+||+|+.+++-...... .-....|++.+.+.|+|||.+++-+.
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 9998765 345789999998543211100 00113799999999999999988764
No 278
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.67 E-value=7.9e-08 Score=93.66 Aligned_cols=123 Identities=18% Similarity=0.044 Sum_probs=82.5
Q ss_pred hHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHC------------------------------------------CC
Q 035593 64 TYFDAFATLPPILPPGPIGILGFGAGSAARLILDLY------------------------------------------PE 101 (269)
Q Consensus 64 ~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~------------------------------------------p~ 101 (269)
.....|+.+....+...|||.+||+|+++.+++... +.
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 344445433334567899999999999998877541 23
Q ss_pred ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccccc---CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHh
Q 035593 102 AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASL---KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQ 178 (269)
Q Consensus 102 ~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~---~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~ 178 (269)
.+|+++|+|+.+++.|+++....+ ....+++.++|+.++.. .++||+|+++++-.......-...++|+.+.+
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~ag----v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAG----IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTT----CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcC----CCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 589999999999999999874332 13469999999998832 23899999986433211111112456666655
Q ss_pred hc---cCCcEEEEEe
Q 035593 179 CL---RKGGRIMVNV 190 (269)
Q Consensus 179 ~L---~pgG~l~~~~ 190 (269)
.| .|||.+.+-.
T Consensus 333 ~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 333 IMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHCTTCEEEEEE
T ss_pred HHHhhCCCCeEEEEe
Confidence 54 4788777654
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.67 E-value=3.4e-08 Score=94.75 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=74.2
Q ss_pred CCcEEEEcCcccHHHHHHHHHC-------------CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 78 PGPIGILGFGAGSAARLILDLY-------------PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~-------------p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
.+.|||||||+|.+...+++.. ...+|++||.||..+...++... +.| ..+|+++.+|++++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~----~d~VtVI~gd~eev 484 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW----KRRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT----TTCSEEEESCGGGH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC----CCeEEEEeCchhhc
Confidence 3579999999999975433221 13499999999976655444332 333 36899999999999
Q ss_pred cc------CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEE
Q 035593 145 SL------KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIM 187 (269)
Q Consensus 145 ~~------~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~ 187 (269)
.. .++.|+|++..... ....-..++.+..+.+.|||||+++
T Consensus 485 ~lp~~~~~~ekVDIIVSElmGs--fl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 485 PGIAKDRGFEQPDIIVSELLGS--FGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHTTCCCCSEEEECCCBT--TBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccccCCCCcccEEEEecccc--ccchhccHHHHHHHHHhCCCCcEEE
Confidence 44 78999999876532 1111124688888899999999876
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.64 E-value=3.4e-08 Score=84.60 Aligned_cols=75 Identities=13% Similarity=0.071 Sum_probs=57.2
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccccc------C
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASL------K 147 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~------~ 147 (269)
.+.+..+|||||||+|.++. +.+ .+..+|++||+|+.+++.+++++.. .++++++++|+..+.. .
T Consensus 18 ~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~-------~~~v~~i~~D~~~~~~~~~~~~~ 88 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL-------GPKLTIYQQDAMTFNFGELAEKM 88 (252)
T ss_dssp CCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT-------GGGEEEECSCGGGCCHHHHHHHH
T ss_pred CCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECchhhCCHHHhhccc
Confidence 34567899999999999999 654 3333499999999999999998742 2479999999998621 1
Q ss_pred CCeeEEEEcC
Q 035593 148 DGFSGILVDL 157 (269)
Q Consensus 148 ~~yD~I~~d~ 157 (269)
+..|.|+.++
T Consensus 89 ~~~~~vvsNl 98 (252)
T 1qyr_A 89 GQPLRVFGNL 98 (252)
T ss_dssp TSCEEEEEEC
T ss_pred CCceEEEECC
Confidence 2456777764
No 281
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.62 E-value=3.4e-08 Score=85.77 Aligned_cols=106 Identities=16% Similarity=0.083 Sum_probs=79.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC-----CCceEEEEECChH--------------------------HHHHHHHhcCccc
Q 035593 77 PPGPIGILGFGAGSAARLILDLY-----PEAVIHGWELDPS--------------------------VIKVAREFFALEK 125 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~-----p~~~v~~vEidp~--------------------------~~~~a~~~~~~~~ 125 (269)
.+++|||+|+..|..+..+++.. ++.+|+++|..+. .++.++++|...+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 58899999999999998887653 4779999996421 3566777764221
Q ss_pred cccCCCCcEEEEEcccccc---ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 126 LEKSYPDRLFVYVGNALKA---SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 126 ~~~~~~~rv~~~~~D~~~~---~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
. ..++++++.||+.+. ...++||+|++|+... -.+.++|+.+..+|+|||++++.-.
T Consensus 186 l---~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y------~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 L---LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY------ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp C---CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH------HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred C---CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc------ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 1 136899999999876 2346899999997421 1246899999999999999999554
No 282
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.60 E-value=4.4e-08 Score=84.14 Aligned_cols=100 Identities=14% Similarity=0.092 Sum_probs=67.4
Q ss_pred CCCC--CcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC-------ccccccCCCCcEEEEEcccccc-
Q 035593 75 ILPP--GPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFA-------LEKLEKSYPDRLFVYVGNALKA- 144 (269)
Q Consensus 75 l~~~--~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~-------~~~~~~~~~~rv~~~~~D~~~~- 144 (269)
+.++ .+|||+|||.|..+..+++. +++|++||++|.+++++++.+. .+.| ...+++++++|+.++
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~---l~~~i~~~~~D~~~~L 158 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGW---LQERLQLIHASSLTAL 158 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHH---HHHHEEEEESCHHHHS
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhh---hhcCEEEEECCHHHHH
Confidence 3455 89999999999999999986 5689999999998777766542 1110 014799999999987
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCc
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGG 184 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG 184 (269)
...++||+|++|..-+.. . ..+.+++..+.|++.+
T Consensus 159 ~~~~~~fDvV~lDP~y~~~--~---~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 159 TDITPRPQVVYLDPMFPHK--Q---KSALVKKEMRVFQSLV 194 (258)
T ss_dssp TTCSSCCSEEEECCCCCCC--C---C-----HHHHHHHHHS
T ss_pred HhCcccCCEEEEcCCCCCc--c---cchHHHHHHHHHHHhh
Confidence 234579999999643321 1 1234455555555543
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.58 E-value=4.4e-08 Score=92.74 Aligned_cols=111 Identities=9% Similarity=-0.022 Sum_probs=79.6
Q ss_pred CCcEEEEcCcccHHHHHHHHHCC---------------CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccc
Q 035593 78 PGPIGILGFGAGSAARLILDLYP---------------EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNAL 142 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p---------------~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~ 142 (269)
+.+|||.+||+|.+...+.+... ..+++++|+|+.++++|+.++.+... +.++.++++|..
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi----~~~i~i~~gDtL 320 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI----DFNFGKKNADSF 320 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC----CCBCCSSSCCTT
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC----Ccccceeccchh
Confidence 34899999999999887755322 46899999999999999988754331 234555788876
Q ss_pred cc--ccCCCeeEEEEcCCCCCC------------------------CCCC-CCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 143 KA--SLKDGFSGILVDLFSKGS------------------------LLSE-LEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 143 ~~--~~~~~yD~I~~d~~~~~~------------------------~~~~-l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.. ....+||+|+.+++-... .++. -..-.|++.+.+.|+|||.+++-+..
T Consensus 321 ~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 321 LDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred cCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 55 345789999998543311 1111 01126999999999999999887743
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.53 E-value=6.3e-07 Score=80.44 Aligned_cols=137 Identities=14% Similarity=0.125 Sum_probs=97.8
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC---ccccccCCCCcEEEEEcccccc--ccCCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFA---LEKLEKSYPDRLFVYVGNALKA--SLKDG 149 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~---~~~~~~~~~~rv~~~~~D~~~~--~~~~~ 149 (269)
..|..+|||+++|.|+=+.+++...++..|+++|+++.-++..++++. ... .....++.+...|++.+ ...++
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~--~~~~~~v~v~~~D~~~~~~~~~~~ 223 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEE--IRDGNQVRVTSWDGRKWGELEGDT 223 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTT--TTTSSSEEEECCCGGGHHHHSTTC
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhh--hccCCceEEEeCchhhcchhcccc
Confidence 457889999999999999999887666789999999999888877652 111 00135799999999988 45679
Q ss_pred eeEEEEcCCCCCC---C---CCCC--------------CcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHH
Q 035593 150 FSGILVDLFSKGS---L---LSEL--------------EDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVME 209 (269)
Q Consensus 150 yD~I~~d~~~~~~---~---~~~l--------------~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 209 (269)
||.|++|++-... . .+.. ...++++.+.+.|||||+|+....+..+. .+ +..+.
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~-----EN-E~vV~ 297 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL-----QN-EYVVQ 297 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT-----TT-HHHHH
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh-----hC-HHHHH
Confidence 9999999875431 1 1111 12478888999999999999988776542 12 34455
Q ss_pred HHHHHHHHHh
Q 035593 210 ATLKAMHKVF 219 (269)
Q Consensus 210 ~~~~~l~~~F 219 (269)
.+++.....+
T Consensus 298 ~~L~~~~~~~ 307 (359)
T 4fzv_A 298 GAIELLANQY 307 (359)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhCCCCc
Confidence 5555544443
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.52 E-value=4.6e-07 Score=85.63 Aligned_cols=113 Identities=17% Similarity=0.120 Sum_probs=83.9
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC---CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCCC
Q 035593 77 PPGPIGILGFGAGSAARLILDLY---PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKDG 149 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~---p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~~ 149 (269)
+..+|||.+||+|.+...+.++. +..+++++|+++.++++|+.++.+... ..+++.++++|.... ....+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi---~~~~~~I~~gDtL~~d~p~~~~~~ 297 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV---PIENQFLHNADTLDEDWPTQEPTN 297 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEESCTTTSCSCCSSCCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC---CcCccceEecceeccccccccccc
Confidence 46799999999999998888764 357999999999999999987644321 114689999998765 24578
Q ss_pred eeEEEEcCCCCCCC------------------CCC-CCcHHHHHHHHhhcc-CCcEEEEEecC
Q 035593 150 FSGILVDLFSKGSL------------------LSE-LEDPNTWEKLRQCLR-KGGRIMVNVGG 192 (269)
Q Consensus 150 yD~I~~d~~~~~~~------------------~~~-l~~~e~~~~~~~~L~-pgG~l~~~~~~ 192 (269)
||+|+.+++-.... ++. -..-.|++.+.+.|+ |||++++-+..
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 99999985432111 000 001359999999999 99999887754
No 286
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.51 E-value=2.1e-07 Score=80.51 Aligned_cols=137 Identities=13% Similarity=0.028 Sum_probs=88.0
Q ss_pred CCCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc-cccccccCCCee
Q 035593 73 PPILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG-NALKASLKDGFS 151 (269)
Q Consensus 73 ~~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~-D~~~~~~~~~yD 151 (269)
..+.+..+||||||+.|+++..+++..+...|+++|+...+....+. ..... .+-+.+..+ |.+. ..+.++|
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~-----~~iv~~~~~~di~~-l~~~~~D 149 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLG-----WNIVKFKDKSNVFT-MPTEPSD 149 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTT-----GGGEEEECSCCTTT-SCCCCCS
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccC-----CceEEeecCceeee-cCCCCcC
Confidence 34567889999999999999999986555689999996532100000 00000 011222211 2222 3457899
Q ss_pred EEEEcCCCCCCCC--CCCCcHHHHHHHHhhccCC-cEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEE
Q 035593 152 GILVDLFSKGSLL--SELEDPNTWEKLRQCLRKG-GRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLS 227 (269)
Q Consensus 152 ~I~~d~~~~~~~~--~~l~~~e~~~~~~~~L~pg-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~ 227 (269)
+|++|.....+.. .+..+...++.+.+.|+|| |.|++-++.++ ......++..|++.|. .+...+
T Consensus 150 lVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y----------G~~~~~ll~~lk~~F~-~V~~~K 217 (300)
T 3eld_A 150 TLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY----------HPDVIEKLERLQLRFG-GGIVRV 217 (300)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT----------SHHHHHHHHHHHHHHC-CEEECC
T ss_pred EEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc----------CccHHHHHHHHHHhCC-cEEEEe
Confidence 9999976542211 1222345688888999999 99999998753 1236788999999996 666664
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.45 E-value=4.6e-07 Score=88.25 Aligned_cols=116 Identities=9% Similarity=0.017 Sum_probs=80.0
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCC---CceEEEEECChHHHHHH--HHhcCccccccCCCCcEEEEEcccccc--ccCC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYP---EAVIHGWELDPSVIKVA--REFFALEKLEKSYPDRLFVYVGNALKA--SLKD 148 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p---~~~v~~vEidp~~~~~a--~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~ 148 (269)
.+..+|||.|||+|.++..+++..+ ..+++++|+|+.++++| +..+..+.... ......+...|.... ....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Llh-Gi~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVS-SNNAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCB-TTBCCEEECCCGGGCCGGGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhc-CCCcceEEecchhcccccccC
Confidence 3577999999999999999988664 36899999999999999 54443211100 012245666676663 3457
Q ss_pred CeeEEEEcCCCCCCCC-------------------C-C----C-CcHHHHHHHHhhccCCcEEEEEecC
Q 035593 149 GFSGILVDLFSKGSLL-------------------S-E----L-EDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~-------------------~-~----l-~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+||+|+.+++-..... + . . ....|++.+.+.|++||.+++-+..
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 8999999864321100 0 0 0 1236889999999999999988754
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.37 E-value=1.1e-06 Score=75.76 Aligned_cols=73 Identities=27% Similarity=0.302 Sum_probs=62.5
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----c--cCC
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----S--LKD 148 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~--~~~ 148 (269)
+.+...++|.+||.|..+..++++ +.+|+++|.||.+++.|++ +. ++|++++++++.++ . ..+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~--------~~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH--------LPGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC--------CTTEEEEESCGGGHHHHHHHTTCS
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc--------cCCEEEEECCcchHHHHHHHcCCC
Confidence 457789999999999999999995 7899999999999999999 64 25899999999987 1 225
Q ss_pred CeeEEEEcCC
Q 035593 149 GFSGILVDLF 158 (269)
Q Consensus 149 ~yD~I~~d~~ 158 (269)
++|.|++|+.
T Consensus 89 ~vDgIL~DLG 98 (285)
T 1wg8_A 89 RVDGILADLG 98 (285)
T ss_dssp CEEEEEEECS
T ss_pred CcCEEEeCCc
Confidence 7999998864
No 289
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.36 E-value=3.2e-06 Score=72.86 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=80.0
Q ss_pred CCcEEEEcC------cccHHHHHHHHHCCC-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCe
Q 035593 78 PGPIGILGF------GAGSAARLILDLYPE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGF 150 (269)
Q Consensus 78 ~~~VL~iG~------G~G~~~~~l~~~~p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~y 150 (269)
..+||++|+ ..|+ ..+++..|. +.|+++|+.|-. . +.. .++++|..+.....+|
T Consensus 110 gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~-----------s-----da~-~~IqGD~~~~~~~~k~ 170 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV-----------S-----DAD-STLIGDCATVHTANKW 170 (344)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB-----------C-----SSS-EEEESCGGGEEESSCE
T ss_pred CCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccc-----------c-----CCC-eEEEccccccccCCCC
Confidence 789999996 5666 344555675 699999998721 1 223 4499998877667899
Q ss_pred eEEEEcCCCCCC-C--CCC----CCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCce
Q 035593 151 SGILVDLFSKGS-L--LSE----LEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKL 223 (269)
Q Consensus 151 D~I~~d~~~~~~-~--~~~----l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v 223 (269)
|+|++|...... . ... -..+..++-+.++|+|||.|++-++... . ...+..+++.|. .+
T Consensus 171 DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs-----------g--~~~L~~lrk~F~-~V 236 (344)
T 3r24_A 171 DLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS-----------W--NADLYKLMGHFS-WW 236 (344)
T ss_dssp EEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS-----------C--CHHHHHHHTTEE-EE
T ss_pred CEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC-----------C--HHHHHHHHhhCC-eE
Confidence 999999865522 1 111 1235677778999999999999887532 1 133566778995 55
Q ss_pred EEEE
Q 035593 224 YVLS 227 (269)
Q Consensus 224 ~~~~ 227 (269)
-.++
T Consensus 237 K~fK 240 (344)
T 3r24_A 237 TAFV 240 (344)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5554
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.35 E-value=5.1e-07 Score=76.53 Aligned_cols=131 Identities=14% Similarity=0.122 Sum_probs=82.7
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcE---EEEEc-cccccccCCC
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRL---FVYVG-NALKASLKDG 149 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv---~~~~~-D~~~~~~~~~ 149 (269)
.+.|..+|+||||+.|+.+.++++..+-..|.+..+.... . ...... ..+.+ +++.+ |+++. ...+
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~----~~P~~~----~~~Gv~~i~~~~G~Df~~~-~~~~ 139 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H----EEPMLM----QSYGWNIVTMKSGVDVFYK-PSEI 139 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S----CCCCCC----CSTTGGGEEEECSCCGGGS-CCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c----cCCCcc----cCCCceEEEeeccCCccCC-CCCC
Confidence 6778999999999999999999884211233444433221 0 001110 00233 55557 88764 3458
Q ss_pred eeEEEEcCCCCCCCC--CCCCcHHHHHHHHhhccCCc-EEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEE
Q 035593 150 FSGILVDLFSKGSLL--SELEDPNTWEKLRQCLRKGG-RIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYV 225 (269)
Q Consensus 150 yD~I~~d~~~~~~~~--~~l~~~e~~~~~~~~L~pgG-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~ 225 (269)
+|+|++|+....... .+..+...++-+.+.|+||| .|++-++... ...+.+.++.|++.|. .+..
T Consensus 140 ~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~----------~~~~~~~l~~lk~~F~-~vkv 207 (269)
T 2px2_A 140 SDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPY----------MPKVIEKLESLQRRFG-GGLV 207 (269)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT----------SHHHHHHHHHHHHHHC-CEEE
T ss_pred CCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCC----------chHHHHHHHHHHHHcC-CEEE
Confidence 999999986542211 12222346777889999999 9999888643 2236677889999996 4553
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.33 E-value=1.3e-06 Score=73.02 Aligned_cols=128 Identities=13% Similarity=0.165 Sum_probs=89.3
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHH--HHHhcCccccccCCCCcEEEEEc-cccccccCCCe
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKV--AREFFALEKLEKSYPDRLFVYVG-NALKASLKDGF 150 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~--a~~~~~~~~~~~~~~~rv~~~~~-D~~~~~~~~~y 150 (269)
.+.+...||||||+.|..+.+++......+|.++|+-+.--+. -.+.++ -.-++++.+ |.+.... .++
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~g--------wn~v~fk~gvDv~~~~~-~~~ 145 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYG--------WNIVKLMSGKDVFYLPP-EKC 145 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTT--------TTSEEEECSCCGGGCCC-CCC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcC--------cCceEEEeccceeecCC-ccc
Confidence 5678889999999999999988886555689999996532110 000111 135899999 8755433 779
Q ss_pred eEEEEcCCCCCCCCC--CCCcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcC
Q 035593 151 SGILVDLFSKGSLLS--ELEDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGK 221 (269)
Q Consensus 151 D~I~~d~~~~~~~~~--~l~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 221 (269)
|.|++|.-.....+. +.-+...++.+.+.|++ |-+++-+..++ .+...+.++.|+..|+.
T Consensus 146 DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py----------~p~v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY----------MPTVIEHLERLQRKHGG 207 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC----------SHHHHHHHHHHHHHHCC
T ss_pred cEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC----------ChhHHHHHHHHHHHhCC
Confidence 999999866322211 11234577888899998 89999888775 22345778889999974
No 292
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.20 E-value=1.7e-06 Score=84.08 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=78.5
Q ss_pred CCcEEEEcCcccHHHHHHHHHC-------C-----CceEEEEECCh---HHHHHHHHhcC-c--------cccc------
Q 035593 78 PGPIGILGFGAGSAARLILDLY-------P-----EAVIHGWELDP---SVIKVAREFFA-L--------EKLE------ 127 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~-------p-----~~~v~~vEidp---~~~~~a~~~~~-~--------~~~~------ 127 (269)
+-+|||+|.|+|.....+.+.+ | ..+++.+|..| +.+..|-..+. + ..|.
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4689999999999887776542 2 16899999955 44433222211 0 0010
Q ss_pred ---cCC--CCcEEEEEcccccc--cc----CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 128 ---KSY--PDRLFVYVGNALKA--SL----KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 128 ---~~~--~~rv~~~~~D~~~~--~~----~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
... .-+++++.||+++. .. ..++|++++|.|++ ...+.+++.++|..+.+.++|||.++...
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP-AKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCC-CCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 011 23688999999876 21 47899999999987 46678999999999999999999987644
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.19 E-value=8.6e-06 Score=70.26 Aligned_cols=129 Identities=14% Similarity=0.172 Sum_probs=88.4
Q ss_pred CCCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHH--HHHhcCccccccCCCCcEEEEEc-cccccccCCCe
Q 035593 74 PILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKV--AREFFALEKLEKSYPDRLFVYVG-NALKASLKDGF 150 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~--a~~~~~~~~~~~~~~~rv~~~~~-D~~~~~~~~~y 150 (269)
.+.+...||||||+.|..+.+++......+|.++|+-..--+. -.+.++. .-++++.+ |++.... .++
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w--------~lV~~~~~~Dv~~l~~-~~~ 161 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGW--------NIVTMKSGVDVFYRPS-ECC 161 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTG--------GGEEEECSCCTTSSCC-CCC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCC--------cceEEEeccCHhhCCC-CCC
Confidence 4567889999999999999988875545589999996531100 0001111 23788877 7766543 679
Q ss_pred eEEEEcCCCCCCCCC--CCCcHHHHHHHHhhccCC-cEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcC
Q 035593 151 SGILVDLFSKGSLLS--ELEDPNTWEKLRQCLRKG-GRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGK 221 (269)
Q Consensus 151 D~I~~d~~~~~~~~~--~l~~~e~~~~~~~~L~pg-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 221 (269)
|+|++|+......+. ..-+...++.+.+.|+++ |-|++-+..++. . ...+.++.|+..|+.
T Consensus 162 D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~---------~-~v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 162 DTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM---------P-KVIEKMELLQRRYGG 225 (321)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS---------H-HHHHHHHHHHHHHCC
T ss_pred CEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC---------h-HHHHHHHHHHHHhCC
Confidence 999999874422211 112345777888999998 999999987752 2 345778899999974
No 294
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.17 E-value=3.6e-06 Score=81.55 Aligned_cols=112 Identities=15% Similarity=0.226 Sum_probs=81.6
Q ss_pred CCcEEEEcCcccHHHHHHHHHC-------C-----CceEEEEEC---ChHHHHHHHHhcC-c--------cccc------
Q 035593 78 PGPIGILGFGAGSAARLILDLY-------P-----EAVIHGWEL---DPSVIKVAREFFA-L--------EKLE------ 127 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~-------p-----~~~v~~vEi---dp~~~~~a~~~~~-~--------~~~~------ 127 (269)
.-+|||+|.|+|.......+.+ | ..+++++|. +++.+..+-..+. + ..|.
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 4589999999999887766542 2 257999999 7777765444221 0 0010
Q ss_pred ---cCC--CCcEEEEEcccccc--cc----CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 128 ---KSY--PDRLFVYVGNALKA--SL----KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 128 ---~~~--~~rv~~~~~D~~~~--~~----~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
... .-+++++.+|+++. .. ..++|+|++|.|++ ...+.+++.++|+.+++.++|||.++...
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAP-AKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCG-GGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCC-cCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 001 24678899999875 21 46899999999987 35678999999999999999999988754
No 295
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.14 E-value=9.7e-06 Score=69.96 Aligned_cols=154 Identities=14% Similarity=0.020 Sum_probs=101.4
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCee
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGFS 151 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~yD 151 (269)
++..+||+=+|+|.++.++++ +..+++.||.++..++..++++.. ..+++++..|+... ....+||
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~-------~~~~~V~~~D~~~~L~~l~~~~~~fd 161 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF-------NKKVYVNHTDGVSKLNALLPPPEKRG 161 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT-------TSCEEEECSCHHHHHHHHCSCTTSCE
T ss_pred cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc-------CCcEEEEeCcHHHHHHHhcCCCCCcc
Confidence 467899999999999999988 568999999999999999998853 36899999999875 2345799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHh--hccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEE--
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQ--CLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLS-- 227 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~--~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~-- 227 (269)
+|++|.+-.. .. .-...++.+.+ .+.|+|+++++..-.. ......+.+.|++.-. ....++
T Consensus 162 LVfiDPPYe~---k~-~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~----------~~~~~~~~~~l~~~~~-~~l~~el~ 226 (283)
T 2oo3_A 162 LIFIDPSYER---KE-EYKEIPYAIKNAYSKFSTGLYCVWYPVVN----------KAWTEQFLRKMREISS-KSVRIELH 226 (283)
T ss_dssp EEEECCCCCS---TT-HHHHHHHHHHHHHHHCTTSEEEEEEEESS----------HHHHHHHHHHHHHHCS-SEEEEEEE
T ss_pred EEEECCCCCC---Cc-HHHHHHHHHHHhCccCCCeEEEEEEeccc----------hHHHHHHHHHHHhcCC-CeEEEEEE
Confidence 9999963220 00 12344444443 4678999999874332 2346677788876533 343332
Q ss_pred cCC----CCc-eEEEEecCCCCCHHHHHHhcC
Q 035593 228 LGN----RKD-DSLIALTGELPDLDDWKRALP 254 (269)
Q Consensus 228 ~~~----~~n-~v~~~~~~~~~~~~~~~~~l~ 254 (269)
+.. +-+ .=+++.+.|..-.+++++.+|
T Consensus 227 ~~~~~~~gm~gsGm~viNpP~~l~~~~~~~l~ 258 (283)
T 2oo3_A 227 LNPLINEGMTGCGLWIINPPYTFPSEIKLVLE 258 (283)
T ss_dssp CCCSSCCSCCEEEEEEESCCTTHHHHHHHHHH
T ss_pred ecCCCCCCcCceeEEEECCchhHHHHHHHHHH
Confidence 211 111 125556666543444444443
No 296
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.03 E-value=6.4e-05 Score=67.27 Aligned_cols=94 Identities=13% Similarity=0.089 Sum_probs=66.5
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
+.+..+|||||++.|+.+..+.++ +.+|++||+.|---.+ . ..++|+++.+|+..+ ....++|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l-~-----------~~~~V~~~~~d~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSL-M-----------DTGQVTWLREDGFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHH-H-----------TTTCEEEECSCTTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhh-c-----------cCCCeEEEeCccccccCCCCCcCEE
Confidence 557889999999999999999984 7899999986511111 1 147899999999998 445689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCC--cEEEEEe
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKG--GRIMVNV 190 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pg--G~l~~~~ 190 (269)
++|.... .....+.+.+.|..+ +.+++|+
T Consensus 275 vsDm~~~--------p~~~~~l~~~wl~~~~~~~aI~~l 305 (375)
T 4auk_A 275 VCDMVEK--------PAKVAALMAQWLVNGWCRETIFNL 305 (375)
T ss_dssp EECCSSC--------HHHHHHHHHHHHHTTSCSEEEEEE
T ss_pred EEcCCCC--------hHHhHHHHHHHHhccccceEEEEE
Confidence 9997543 234444444444443 2355665
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.87 E-value=3.6e-05 Score=72.57 Aligned_cols=111 Identities=18% Similarity=0.070 Sum_probs=77.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC-------------CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP-------------EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK 143 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p-------------~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~ 143 (269)
+..+|+|-.||+|++...+.++.. ...+.++|+++.+..+|+-++-+.. ....++..+|...
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg-----~~~~~I~~~dtL~ 291 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG-----LEYPRIDPENSLR 291 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT-----CSCCEEECSCTTC
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC-----Ccccccccccccc
Confidence 467999999999999877654321 2479999999999999998764433 2234677888775
Q ss_pred c-----ccCCCeeEEEEcCCCCCCC--------CC----CCCcHHHHHHHHhhcc-------CCcEEEEEecC
Q 035593 144 A-----SLKDGFSGILVDLFSKGSL--------LS----ELEDPNTWEKLRQCLR-------KGGRIMVNVGG 192 (269)
Q Consensus 144 ~-----~~~~~yD~I~~d~~~~~~~--------~~----~l~~~e~~~~~~~~L~-------pgG~l~~~~~~ 192 (269)
. ....+||+|+.+++-.... +. .-...-|++.+.+.|+ |||++++-+..
T Consensus 292 ~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 292 FPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp SCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred CchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 4 2345899999986433111 10 0012357888888887 69999887743
No 298
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.85 E-value=0.00025 Score=63.99 Aligned_cols=110 Identities=14% Similarity=-0.031 Sum_probs=75.3
Q ss_pred CCcEEEEcCcccHHHHHHHHH-----------------CCCceEEEEECC-----------hHHHHHHHHhcCccccccC
Q 035593 78 PGPIGILGFGAGSAARLILDL-----------------YPEAVIHGWELD-----------PSVIKVAREFFALEKLEKS 129 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~-----------------~p~~~v~~vEid-----------p~~~~~a~~~~~~~~~~~~ 129 (269)
+-+|+|+||++|..+..+... .|..+|..-|+- |.+.+.+++..+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 578999999999998776654 356788888986 5555554443321
Q ss_pred CCCcEEEEEcccccc----ccCCCeeEEEEcCCCCCC--CCCCCCc------------------H---------------
Q 035593 130 YPDRLFVYVGNALKA----SLKDGFSGILVDLFSKGS--LLSELED------------------P--------------- 170 (269)
Q Consensus 130 ~~~rv~~~~~D~~~~----~~~~~yD~I~~d~~~~~~--~~~~l~~------------------~--------------- 170 (269)
..+-.++.+.+..| .+.+++|+|++...-++- .+..+.. +
T Consensus 127 -~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~ 205 (384)
T 2efj_A 127 -KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFT 205 (384)
T ss_dssp -CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHH
T ss_pred -CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHH
Confidence 12347777888877 567899999987655532 1212211 1
Q ss_pred HHHHHHHhhccCCcEEEEEecCCC
Q 035593 171 NTWEKLRQCLRKGGRIMVNVGGSC 194 (269)
Q Consensus 171 e~~~~~~~~L~pgG~l~~~~~~~~ 194 (269)
.|++..++.|+|||.+++.+.+..
T Consensus 206 ~FL~~Ra~eL~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 206 TFLRIHSEELISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHhccCCeEEEEEecCC
Confidence 247777999999999999987753
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.81 E-value=7.3e-05 Score=66.00 Aligned_cols=74 Identities=31% Similarity=0.390 Sum_probs=61.4
Q ss_pred CCCCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----cc---
Q 035593 75 ILPPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SL--- 146 (269)
Q Consensus 75 l~~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~--- 146 (269)
+.|...++|..||+|..+.+++++. |+.+|+++|.||.+++.|+ .+ . +.|+++++++..++ ..
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~------~~Rv~lv~~nF~~l~~~L~~~g~ 125 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D------DPRFSIIHGPFSALGEYVAERDL 125 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C------CTTEEEEESCGGGHHHHHHHTTC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c------CCcEEEEeCCHHHHHHHHHhcCC
Confidence 4567899999999999999999875 6789999999999999995 43 1 46899999999887 11
Q ss_pred CCCeeEEEEcC
Q 035593 147 KDGFSGILVDL 157 (269)
Q Consensus 147 ~~~yD~I~~d~ 157 (269)
.+++|.|+.|+
T Consensus 126 ~~~vDgILfDL 136 (347)
T 3tka_A 126 IGKIDGILLDL 136 (347)
T ss_dssp TTCEEEEEEEC
T ss_pred CCcccEEEECC
Confidence 23699999875
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.72 E-value=4.8e-05 Score=67.97 Aligned_cols=59 Identities=15% Similarity=0.045 Sum_probs=50.6
Q ss_pred CCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 78 PGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
...|||||.|.|.++..|++.....+|++||+|+.++...++.+. .++++++.+|+..+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~--------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE--------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT--------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc--------CCCEEEEECCccch
Confidence 478999999999999999985445689999999999999888762 35899999999765
No 301
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.68 E-value=6.7e-05 Score=58.30 Aligned_cols=59 Identities=14% Similarity=0.046 Sum_probs=45.3
Q ss_pred CCCCcEEEEcCccc-HHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc--cCCCeeE
Q 035593 76 LPPGPIGILGFGAG-SAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS--LKDGFSG 152 (269)
Q Consensus 76 ~~~~~VL~iG~G~G-~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~--~~~~yD~ 152 (269)
.++.+|||||||.| ..+..|+++ .+..|+++||+|..++ ++..|.++-. .-+.||+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~--------------------~v~dDiF~P~~~~Y~~~DL 92 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG--------------------IVRDDITSPRMEIYRGAAL 92 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT--------------------EECCCSSSCCHHHHTTEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc--------------------eEEccCCCCcccccCCcCE
Confidence 35789999999999 699999874 4789999999984333 6667777652 2258999
Q ss_pred EEE
Q 035593 153 ILV 155 (269)
Q Consensus 153 I~~ 155 (269)
|..
T Consensus 93 IYs 95 (153)
T 2k4m_A 93 IYS 95 (153)
T ss_dssp EEE
T ss_pred EEE
Confidence 963
No 302
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.42 E-value=0.00036 Score=62.79 Aligned_cols=116 Identities=12% Similarity=0.039 Sum_probs=71.2
Q ss_pred CCcEEEEcCcccHHHHHH--------HHHC-------CCceEEEEECChHHHHHHHHhcC-cccc------ccCCCCcEE
Q 035593 78 PGPIGILGFGAGSAARLI--------LDLY-------PEAVIHGWELDPSVIKVAREFFA-LEKL------EKSYPDRLF 135 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l--------~~~~-------p~~~v~~vEidp~~~~~a~~~~~-~~~~------~~~~~~rv~ 135 (269)
+-+|+|+|||+|..+..+ .+++ |..+|..-|+-..-....=+.+. .... ......+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 578999999999998776 2222 56788888875544332222221 1000 000011224
Q ss_pred EEEcccccc----ccCCCeeEEEEcCCCCCCC--CCCCC--------------------------------cHHHHHHHH
Q 035593 136 VYVGNALKA----SLKDGFSGILVDLFSKGSL--LSELE--------------------------------DPNTWEKLR 177 (269)
Q Consensus 136 ~~~~D~~~~----~~~~~yD~I~~d~~~~~~~--~~~l~--------------------------------~~e~~~~~~ 177 (269)
++.+.+..| .+.+++|+|++...-++-. +..+. -..|++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666665 4678999999876555321 11121 124688889
Q ss_pred hhccCCcEEEEEecCC
Q 035593 178 QCLRKGGRIMVNVGGS 193 (269)
Q Consensus 178 ~~L~pgG~l~~~~~~~ 193 (269)
+.|+|||.+++.+.+.
T Consensus 213 ~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHEEEEEEEEEEEEEC
T ss_pred HHhCCCCEEEEEEecC
Confidence 9999999999988765
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.20 E-value=0.00035 Score=60.75 Aligned_cols=45 Identities=22% Similarity=0.092 Sum_probs=40.3
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFA 122 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~ 122 (269)
.+...|||++||+|+++..+++ .+.+++++|++|.+++.|++++.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~--~g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAAR--WGRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHH--cCCeEEEEeCCHHHHHHHHHHHH
Confidence 3678999999999999999887 36799999999999999998874
No 304
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.15 E-value=0.00083 Score=60.03 Aligned_cols=112 Identities=17% Similarity=0.066 Sum_probs=76.3
Q ss_pred CCcEEEEcCcccHHHHHHHH--------H--------CCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccc
Q 035593 78 PGPIGILGFGAGSAARLILD--------L--------YPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNA 141 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~--------~--------~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~ 141 (269)
+-+|+|+||++|..+..+.. + .|..+|..-|+-.......-+.+..-. ...+-.++.+.+
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~----~~~~~~f~~gvp 127 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN----DVDGVCFINGVP 127 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC----SCTTCEEEEEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc----ccCCCEEEEecc
Confidence 57899999999976644332 1 356799999998877777666543100 011346777887
Q ss_pred ccc----ccCCCeeEEEEcCCCCCC--CCCCC--------------------Cc-------HHHHHHHHhhccCCcEEEE
Q 035593 142 LKA----SLKDGFSGILVDLFSKGS--LLSEL--------------------ED-------PNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 142 ~~~----~~~~~yD~I~~d~~~~~~--~~~~l--------------------~~-------~e~~~~~~~~L~pgG~l~~ 188 (269)
..| .+.+++|+|++...-++- .|..+ +. ..|++..++.|+|||.+++
T Consensus 128 gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 128 GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 776 567899999987654431 11111 11 2568888999999999999
Q ss_pred EecCC
Q 035593 189 NVGGS 193 (269)
Q Consensus 189 ~~~~~ 193 (269)
.+.+.
T Consensus 208 ~~~gr 212 (359)
T 1m6e_X 208 TILGR 212 (359)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 88765
No 305
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.95 E-value=0.0042 Score=52.86 Aligned_cols=107 Identities=20% Similarity=0.182 Sum_probs=72.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHH-------CCCceEEEEE-----CChH-----------------------HHHHH--HH
Q 035593 77 PPGPIGILGFGAGSAARLILDL-------YPEAVIHGWE-----LDPS-----------------------VIKVA--RE 119 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~-------~p~~~v~~vE-----idp~-----------------------~~~~a--~~ 119 (269)
-+..|+++|+-.|..+..+++. .+..+|.++| ..+. +-++. ++
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4889999999999888776542 2467999999 3321 11111 11
Q ss_pred hcCccccccCCCCcEEEEEcccccc-------ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 120 FFALEKLEKSYPDRLFVYVGNALKA-------SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 120 ~~~~~~~~~~~~~rv~~~~~D~~~~-------~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
++..-+ ..+++++++.|++.+. ....++|+|++|+.. . -.+...|+.+..+|+|||++++.-+.
T Consensus 149 ~~~~~g---~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~---Y---~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 149 CSDFFG---HVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL---Y---EPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TTSTTT---TSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC---H---HHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhhcC---CCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc---c---chHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 111100 0137899999999875 124579999999742 1 12568899999999999999996654
No 306
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.88 E-value=0.0076 Score=53.48 Aligned_cols=96 Identities=18% Similarity=0.095 Sum_probs=67.4
Q ss_pred CCCCCcEEEEcCcc-cHHHHHHHHHCCCce-EEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-----cccccc---
Q 035593 75 ILPPGPIGILGFGA-GSAARLILDLYPEAV-IHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-----GNALKA--- 144 (269)
Q Consensus 75 l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~-v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-----~D~~~~--- 144 (269)
+.+..+||++|+|+ |.++..+++.. +++ |++++.+++-.+.+++. .. .-+.... .|..+.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~--------~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CP--------EVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CT--------TCEEEECCSCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-ch--------hcccccccccchHHHHHHHHH
Confidence 56789999999875 77788888865 554 99999999999999987 31 1122221 111111
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.....+|+|+- ... ....++.+.+.|+++|.+++--
T Consensus 247 ~t~g~g~Dvvid-~~g---------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALE-CTG---------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEE-CSC---------CHHHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEE-CCC---------ChHHHHHHHHHhcCCCEEEEEc
Confidence 23568999984 322 2468899999999999998743
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.85 E-value=0.0097 Score=52.99 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=65.4
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---cccc-c--c
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALK-A--S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~-~--~ 145 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++.. |..+ . .
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~l-Ga~----------~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQL-GAT----------HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHH-TCS----------EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHc-CCC----------EEecCCccCHHHHHHHh
Confidence 456789999999876 77788888764 55 799999999999998764 321 12211 2111 1 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
..+.+|+|+- ... ..+.++.+.+.|+++|.+++-
T Consensus 255 ~~gg~D~vid-~~g---------~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 255 TDGGVNFALE-STG---------SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp TTSCEEEEEE-CSC---------CHHHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCcEEEE-CCC---------CHHHHHHHHHHHhcCCEEEEe
Confidence 2237999983 322 246889999999999998764
No 308
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.82 E-value=0.0041 Score=54.86 Aligned_cols=96 Identities=21% Similarity=0.260 Sum_probs=68.2
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc--ccccc----cc
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG--NALKA----SL 146 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~--D~~~~----~~ 146 (269)
.+.+..+||++|+|+ |.++..+++...+.+|++++.+++-.+.+++. +.. .++.. |..+. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l-Ga~----------~~i~~~~~~~~~v~~~t~ 236 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV-GAD----------AAVKSGAGAADAIRELTG 236 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT-TCS----------EEEECSTTHHHHHHHHHG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CCC----------EEEcCCCcHHHHHHHHhC
Confidence 456789999999875 77888888766578999999999999999874 321 11211 11111 23
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
...+|+|+- ... ..+.++.+.+.|+++|.+++--
T Consensus 237 g~g~d~v~d-~~G---------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 237 GQGATAVFD-FVG---------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp GGCEEEEEE-SSC---------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCeEEEE-CCC---------CHHHHHHHHHHHhcCCEEEEEC
Confidence 458999983 322 2468999999999999988643
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.77 E-value=0.0024 Score=56.26 Aligned_cols=95 Identities=21% Similarity=0.299 Sum_probs=67.5
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc--ccC
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA--SLK 147 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~--~~~ 147 (269)
.+.+..+||++|+|+ |.++..+++.. +++|++++.+++-.+.+++. +.. .++.. |..+. ...
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~----------~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL-GAE----------VAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT-TCS----------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc-CCC----------EEEeCCCcCHHHHHHHhC
Confidence 456789999999875 88888888865 67999999999999998774 321 11211 11111 122
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+.+|+|+.... ..+.++.+.+.|+++|.+++.-
T Consensus 231 g~~d~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 231 GGAHGVLVTAV----------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SSEEEEEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEEeCC----------CHHHHHHHHHHhccCCEEEEeC
Confidence 37999985322 3578999999999999988643
No 310
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.69 E-value=0.019 Score=43.71 Aligned_cols=93 Identities=12% Similarity=0.100 Sum_probs=61.1
Q ss_pred CCcEEEEcCcc-c-HHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCe
Q 035593 78 PGPIGILGFGA-G-SAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGF 150 (269)
Q Consensus 78 ~~~VL~iG~G~-G-~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~y 150 (269)
..+|+.+|+|. | .++..|.+ .+.+|+++|.|++.++.+++. .+.++.+|+.+. ..-..+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~~------------g~~~i~gd~~~~~~l~~a~i~~a 72 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSRTRVDELRER------------GVRAVLGNAANEEIMQLAHLECA 72 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHHT------------TCEEEESCTTSHHHHHHTTGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHc------------CCCEEECCCCCHHHHHhcCcccC
Confidence 56899999973 3 33344433 477999999999998887652 257888998764 223579
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|+|++...+.. .........+.+.|+..++.-..
T Consensus 73 d~vi~~~~~~~-------~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 73 KWLILTIPNGY-------EAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp SEEEECCSCHH-------HHHHHHHHHHHHCSSSEEEEEES
T ss_pred CEEEEECCChH-------HHHHHHHHHHHHCCCCeEEEEEC
Confidence 99987543221 12234445666778887766553
No 311
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.68 E-value=0.0076 Score=53.00 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=66.4
Q ss_pred CCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCCC
Q 035593 75 ILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKDG 149 (269)
Q Consensus 75 l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~~ 149 (269)
+.+..+||++|+|+ |.++..++++..+.+|++++.+++-.+.+++.-.. .-+.....|..+. .....
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~--------~~i~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD--------VTINSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS--------EEEEC-CCCHHHHHHHHTTSSC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe--------EEEeCCCCCHHHHhhhhcCCCC
Confidence 45788999999985 45555666656688999999999988888875321 1112112232221 34456
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+|.++.+.. ..+.+..+.+.|+++|.+++..
T Consensus 233 ~d~~~~~~~----------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 233 VQSAIVCAV----------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEEEECCS----------CHHHHHHHHHTEEEEEEEEECC
T ss_pred ceEEEEecc----------CcchhheeheeecCCceEEEEe
Confidence 888876532 3578899999999999987654
No 312
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.67 E-value=0.0086 Score=52.92 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=65.1
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc----
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA---- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~---- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++.. |..+.
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEY-GAT----------DIINYKNGDIVEQILKA 230 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHH-TCC----------EEECGGGSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHh-CCc----------eEEcCCCcCHHHHHHHH
Confidence 356789999999875 77777888754 55 899999999999998875 321 12211 21111
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.....+|+|+ |... ..+.++.+.+.|+++|.++.-
T Consensus 231 t~g~g~D~v~-d~~g---------~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 231 TDGKGVDKVV-IAGG---------DVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp TTTCCEEEEE-ECSS---------CTTHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCCEEE-ECCC---------ChHHHHHHHHHHhcCCEEEEe
Confidence 2345799998 4322 135788899999999998764
No 313
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.64 E-value=0.0072 Score=53.35 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=65.4
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeE
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~ 152 (269)
.+.+..+||++|+|+ |.++..+++.. +++|++++.+++-.+.+++ ++.. .++ .|...+. +.+|+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~-lGa~----------~v~-~~~~~~~--~~~D~ 237 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS-MGVK----------HFY-TDPKQCK--EELDF 237 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH-TTCS----------EEE-SSGGGCC--SCEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh-cCCC----------eec-CCHHHHh--cCCCE
Confidence 456789999999875 77788888764 6799999999999999877 3421 222 3433332 28999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
|+- .... .+.++.+.+.|+++|.+++--
T Consensus 238 vid-~~g~---------~~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IIS-TIPT---------HYDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEE-CCCS---------CCCHHHHHTTEEEEEEEEECC
T ss_pred EEE-CCCc---------HHHHHHHHHHHhcCCEEEEEC
Confidence 984 3221 135778889999999998753
No 314
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.61 E-value=0.017 Score=51.14 Aligned_cols=120 Identities=13% Similarity=0.110 Sum_probs=75.7
Q ss_pred CCcEEEEcCcccHHHHHHHHHCCC-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccccc----CCCeeE
Q 035593 78 PGPIGILGFGAGSAARLILDLYPE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASL----KDGFSG 152 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~----~~~yD~ 152 (269)
+.+|+|+-||.|.+...+.+..-. ..|.++|+|+..++..+.++. ...++.+|..++.. ...+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~----------~~~~~~~Di~~~~~~~~~~~~~D~ 71 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP----------HTQLLAKTIEGITLEEFDRLSFDM 71 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----------TSCEECSCGGGCCHHHHHHHCCSE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc----------ccccccCCHHHccHhHcCcCCcCE
Confidence 357999999999999999875211 369999999999999999874 23467899988721 126999
Q ss_pred EEEcCCCCCC-CC---CCCC------cHHHHHHHHhhcc--CCcEEEEEecCCCccccccccchhHHHHHHHHHHHH
Q 035593 153 ILVDLFSKGS-LL---SELE------DPNTWEKLRQCLR--KGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHK 217 (269)
Q Consensus 153 I~~d~~~~~~-~~---~~l~------~~e~~~~~~~~L~--pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (269)
|+.+.+-... .. ..+. -.++++ +.+.++ |.=+++=|+.+-.. ...+..+++.|.+
T Consensus 72 l~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~-~i~~~~~~P~~~~~ENV~~l~~---------~~~~~~i~~~l~~ 138 (343)
T 1g55_A 72 ILMSPPCQPFTRIGRQGDMTDSRTNSFLHILD-ILPRLQKLPKYILLENVKGFEV---------SSTRDLLIQTIEN 138 (343)
T ss_dssp EEECCC------------------CHHHHHHH-HGGGCSSCCSEEEEEEETTGGG---------SHHHHHHHHHHHH
T ss_pred EEEcCCCcchhhcCCcCCccCccchHHHHHHH-HHHHhcCCCCEEEEeCCccccC---------HHHHHHHHHHHHH
Confidence 9987542211 10 0111 113333 445566 87666668865321 2245566666654
No 315
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.56 E-value=0.017 Score=51.03 Aligned_cols=93 Identities=14% Similarity=0.114 Sum_probs=64.8
Q ss_pred CCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcc---cccc-----
Q 035593 75 ILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGN---ALKA----- 144 (269)
Q Consensus 75 l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D---~~~~----- 144 (269)
+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++..+ ..++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-Ga~----------~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEI-GAD----------LVLQISKESPQEIARKVE 236 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT-TCS----------EEEECSSCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-CCC----------EEEcCcccccchHHHHHH
Confidence 55788999999875 77888888865 56 999999999999998864 321 222211 1111
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
...+.+|+|+- ... ....++.+.+.|+++|.++..
T Consensus 237 ~~~~~g~D~vid-~~g---------~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 237 GQLGCKPEVTIE-CTG---------AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHTSCCSEEEE-CSC---------CHHHHHHHHHHSCTTCEEEEC
T ss_pred HHhCCCCCEEEE-CCC---------ChHHHHHHHHHhcCCCEEEEE
Confidence 11257999984 221 245788899999999998864
No 316
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.44 E-value=0.036 Score=48.85 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=64.1
Q ss_pred CCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-c---cccc-c---c
Q 035593 75 ILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-G---NALK-A---S 145 (269)
Q Consensus 75 l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~---D~~~-~---~ 145 (269)
+.+..+||++|+|+ |..+..+++.. +++|++++.+++-.+.+++. +.. .++. . |..+ . .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~----------~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC-GAD----------VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT-TCS----------EEEECCTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh-CCC----------EEEcCcccccHHHHHHHHh
Confidence 55788999999874 77777777764 67899999999999998764 321 1221 1 1111 1 1
Q ss_pred c---CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 L---KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~---~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
. ...+|+|+-. .. ....++.+.+.|+++|.++.-
T Consensus 234 ~~~~g~g~D~vid~-~g---------~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 234 RSAIGDLPNVTIDC-SG---------NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHSSSCCSEEEEC-SC---------CHHHHHHHHHHSCTTCEEEEC
T ss_pred ccccCCCCCEEEEC-CC---------CHHHHHHHHHHHhcCCEEEEE
Confidence 1 3579999842 21 245788899999999998764
No 317
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.41 E-value=0.028 Score=49.84 Aligned_cols=94 Identities=13% Similarity=-0.030 Sum_probs=64.6
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-------c
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-------S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-------~ 145 (269)
.+.+..+||++|+|+ |..+..+++.. +++|++++.+++-.+.+++. +.. .++..+..++ .
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL-GAD----------HGINRLEEDWVERVYALT 253 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-TCS----------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc-CCC----------EEEcCCcccHHHHHHHHh
Confidence 456789999999775 77777777764 67999999999999998774 321 2222221121 2
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
....+|+|+-.. .. +.++.+.+.|+++|.+++-.
T Consensus 254 ~g~g~D~vid~~-g~----------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 254 GDRGADHILEIA-GG----------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp TTCCEEEEEEET-TS----------SCHHHHHHHEEEEEEEEEEC
T ss_pred CCCCceEEEECC-Ch----------HHHHHHHHHhhcCCEEEEEe
Confidence 345799998432 21 24677888999999988754
No 318
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.36 E-value=0.015 Score=51.92 Aligned_cols=94 Identities=15% Similarity=0.269 Sum_probs=62.9
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCe
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGF 150 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~y 150 (269)
.+.+..+||++|+|+ |.++..+++.. +++|++++.+++-.+.+++ ++.. .++...-.++ ...+.+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~-lGa~----------~vi~~~~~~~~~~~~~g~ 258 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA-LGAD----------EVVNSRNADEMAAHLKSF 258 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH-HTCS----------EEEETTCHHHHHTTTTCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-cCCc----------EEeccccHHHHHHhhcCC
Confidence 356789999999875 77777888764 7789999999999999886 4421 1121111111 112579
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|+|+-.. .. ...++.+.+.|+++|.++.-
T Consensus 259 Dvvid~~-g~---------~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 259 DFILNTV-AA---------PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEEECC-SS---------CCCHHHHHTTEEEEEEEEEC
T ss_pred CEEEECC-CC---------HHHHHHHHHHhccCCEEEEe
Confidence 9998432 21 12467788899999988763
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.32 E-value=0.0074 Score=54.35 Aligned_cols=101 Identities=16% Similarity=0.105 Sum_probs=66.2
Q ss_pred CCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE---ccc-cc-c---
Q 035593 75 ILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV---GNA-LK-A--- 144 (269)
Q Consensus 75 l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~---~D~-~~-~--- 144 (269)
+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +. +++. .|. .+ .
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-Ga-----------~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDA-GF-----------ETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTT-TC-----------EEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHc-CC-----------cEEcCCCcchHHHHHHHH
Confidence 45788999999986 88888888865 56 999999999999998753 32 1221 122 11 1
Q ss_pred ccCCCeeEEEEcCCCCCCC-----CCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 SLKDGFSGILVDLFSKGSL-----LSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~-----~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.....+|+||- ....... ..++.....++.+.+.|+++|.+++-
T Consensus 250 ~~g~g~Dvvid-~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 250 LGKPEVDCGVD-AVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HSSSCEEEEEE-CSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred hCCCCCCEEEE-CCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 22347999984 3322110 00111235789999999999998763
No 320
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.31 E-value=0.01 Score=52.26 Aligned_cols=94 Identities=19% Similarity=0.154 Sum_probs=64.5
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE----cccc-cccc
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV----GNAL-KASL 146 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~----~D~~-~~~~ 146 (269)
.+ +..+||++|+|+ |.++..+++.. |+++|++++.+++-.+.+++. +.. .++. .|.. +...
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~~~~~ 235 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-GAD----------YVSEMKDAESLINKLTD 235 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-TCS----------EEECHHHHHHHHHHHHT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-CCC----------EEeccccchHHHHHhhc
Confidence 45 889999999864 66777777653 478999999999999998863 321 1111 1111 1123
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
...+|+|+- ... ..+.++.+.+.|+++|.++.-
T Consensus 236 g~g~D~vid-~~g---------~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 236 GLGASIAID-LVG---------TEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp TCCEEEEEE-SSC---------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCccEEEE-CCC---------ChHHHHHHHHHhhcCCEEEEe
Confidence 447999984 322 245889999999999998763
No 321
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.31 E-value=0.027 Score=50.72 Aligned_cols=96 Identities=22% Similarity=0.202 Sum_probs=63.0
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc----
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA---- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~---- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++.. |..+.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~i~~~ 277 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAKEL-GAD----------HVIDPTKENFVEAVLDY 277 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHHH-TCS----------EEECTTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHc-CCC----------EEEcCCCCCHHHHHHHH
Confidence 356789999999864 67777777765 55 999999999999999875 321 12211 21111
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhc----cCCcEEEEEe
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCL----RKGGRIMVNV 190 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L----~pgG~l~~~~ 190 (269)
.....+|+|+ |+... ....+..+.+.| +++|.+++--
T Consensus 278 t~g~g~D~vi-d~~g~--------~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 278 TNGLGAKLFL-EATGV--------PQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp TTTCCCSEEE-ECSSC--------HHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred hCCCCCCEEE-ECCCC--------cHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 2345799998 33221 123566666666 9999988743
No 322
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.22 E-value=0.03 Score=49.91 Aligned_cols=94 Identities=17% Similarity=0.190 Sum_probs=65.8
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE---cccccc----
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV---GNALKA---- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~---~D~~~~---- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++. .|..+.
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-Ga~----------~vi~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEEV-GAT----------ATVDPSAGDVVEAIAGP 246 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHHH-TCS----------EEECTTSSCHHHHHHST
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHc-CCC----------EEECCCCcCHHHHHHhh
Confidence 356789999999875 77778888865 55 999999999999998874 321 1111 121111
Q ss_pred --ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 --SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 --~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
...+.+|+||- ... ..+.++.+.+.|+++|.+++-
T Consensus 247 ~~~~~gg~Dvvid-~~G---------~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 247 VGLVPGGVDVVIE-CAG---------VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TSSSTTCEEEEEE-CSC---------CHHHHHHHHHHEEEEEEEEEC
T ss_pred hhccCCCCCEEEE-CCC---------CHHHHHHHHHHhccCCEEEEE
Confidence 11247999983 322 257889999999999998874
No 323
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.22 E-value=0.012 Score=52.50 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=65.3
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc-----ccccc--
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG-----NALKA-- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~-----D~~~~-- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.|++. +.. .++.. |..+.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~~l-Ga~----------~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAKKF-GVN----------EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHHTT-TCC----------EEECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHc-CCc----------EEEccccCchhHHHHHH
Confidence 456789999999873 77777787764 55 899999999999998764 321 11211 11111
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCC-cEEEEEe
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKG-GRIMVNV 190 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pg-G~l~~~~ 190 (269)
...+.+|+|+- ... ..+.++.+.+.|+++ |.+++--
T Consensus 258 ~~~~gg~D~vid-~~g---------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFE-CIG---------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEE-CSC---------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEE-CCC---------CHHHHHHHHHHhhccCCEEEEEc
Confidence 12348999983 322 357889999999997 9887643
No 324
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.16 E-value=0.018 Score=51.26 Aligned_cols=92 Identities=13% Similarity=0.065 Sum_probs=63.9
Q ss_pred CCCcEEEEc-Cc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE--ccccc-c--ccCCC
Q 035593 77 PPGPIGILG-FG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV--GNALK-A--SLKDG 149 (269)
Q Consensus 77 ~~~~VL~iG-~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~--~D~~~-~--~~~~~ 149 (269)
+..+||++| +| .|.++..+++...+++|++++.+++-.+.+++ ++.. .++. .|..+ . ...+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lGad----------~vi~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LGAH----------HVIDHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TTCS----------EEECTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cCCC----------EEEeCCCCHHHHHHHhcCCC
Confidence 567899998 43 57888888886567899999999999999876 3421 1111 11111 1 23457
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+|+|+- +.. ..+.++.+.+.|+++|.+++-
T Consensus 240 ~Dvvid-~~g---------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFS-TTH---------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEE-CSC---------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEE-CCC---------chhhHHHHHHHhcCCCEEEEE
Confidence 999873 221 346889999999999999864
No 325
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.15 E-value=0.034 Score=49.86 Aligned_cols=102 Identities=17% Similarity=0.104 Sum_probs=66.6
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---c-ccc-c--
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---N-ALK-A-- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D-~~~-~-- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-++.+++. +. +++.- | ..+ .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~~l-Ga-----------~~i~~~~~~~~~~~v~~ 248 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKAQ-GF-----------EIADLSLDTPLHEQIAA 248 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT-TC-----------EEEETTSSSCHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHc-CC-----------cEEccCCcchHHHHHHH
Confidence 355788999999875 78888888875 55 899999999999999764 31 12211 1 111 1
Q ss_pred -ccCCCeeEEEEcCCCCCCC------CCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSL------LSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~------~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.....+|+||- ....... ..+....+.++.+.+.|+++|.+++.
T Consensus 249 ~t~g~g~Dvvid-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 249 LLGEPEVDCAVD-AVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HHSSSCEEEEEE-CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred HhCCCCCCEEEE-CCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 23357999984 3222100 01112345789999999999998764
No 326
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.12 E-value=0.042 Score=47.97 Aligned_cols=95 Identities=13% Similarity=0.048 Sum_probs=64.9
Q ss_pred CCCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE---cccccc---
Q 035593 73 PPILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV---GNALKA--- 144 (269)
Q Consensus 73 ~~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~---~D~~~~--- 144 (269)
..+.+.++||++|+ |.|..+..+++.. +++|++++.+++-.+.+.+.++.. .++. .|..+.
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~~~ 213 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFD----------GAIDYKNEDLAAGLKR 213 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCS----------EEEETTTSCHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCC----------EEEECCCHHHHHHHHH
Confidence 34667899999998 4577777777754 679999999999998885555421 1111 111111
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
...+.+|+|+-.+- .+.++.+.+.|+++|.+++-
T Consensus 214 ~~~~~~d~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 214 ECPKGIDVFFDNVG-----------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HCTTCEEEEEESSC-----------HHHHHHHHTTEEEEEEEEEC
T ss_pred hcCCCceEEEECCC-----------cchHHHHHHHHhhCCEEEEE
Confidence 12457999984321 25788899999999998763
No 327
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.08 E-value=0.014 Score=50.64 Aligned_cols=89 Identities=17% Similarity=0.254 Sum_probs=59.5
Q ss_pred CCCCCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeE
Q 035593 74 PILPPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSG 152 (269)
Q Consensus 74 ~l~~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~ 152 (269)
.+.+..+||++|+| .|.++..+++.. +++|++++ +++-.+.+++. +.. .++ .|..+. .+.+|+
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~l-Ga~----------~v~-~d~~~v--~~g~Dv 202 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKR-GVR----------HLY-REPSQV--TQKYFA 202 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHH-TEE----------EEE-SSGGGC--CSCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHc-CCC----------EEE-cCHHHh--CCCccE
Confidence 35678999999996 377778888764 67999999 99888888773 421 222 242222 678999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|+ |+... +.+..+.+.|+++|.++.-
T Consensus 203 v~-d~~g~----------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 203 IF-DAVNS----------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EE-CC-----------------TTGGGEEEEEEEEEE
T ss_pred EE-ECCCc----------hhHHHHHHHhcCCCEEEEE
Confidence 98 43322 1225567899999998875
No 328
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.08 E-value=0.0073 Score=51.28 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=40.4
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFA 122 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~ 122 (269)
.+...|||..||+|+.+.++.+ -+.+++++|++|..++.|++++.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~--~gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKK--LGRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHH--cCCeEEEEeCCHHHHHHHHHHHH
Confidence 4678899999999999999887 37899999999999999999874
No 329
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.05 E-value=0.024 Score=49.66 Aligned_cols=99 Identities=13% Similarity=-0.001 Sum_probs=65.5
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCC
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKD 148 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~ 148 (269)
.+.+..+||+.|+|+ |.++..+++......+++++.+++-.+.|++. +... -+.....|..+. ....
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l-Ga~~-------~i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF-GAMQ-------TFNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCSE-------EEETTTSCHHHHHHHHGGGC
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc-CCeE-------EEeCCCCCHHHHHHhhcccC
Confidence 355789999999874 55666777766556789999999999998875 3210 011111122221 3445
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.+|+|+- ... ..+.++.+.+.|+++|.+++..
T Consensus 229 g~d~v~d-~~G---------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 229 FNQLILE-TAG---------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp SSEEEEE-CSC---------SHHHHHHHHHHCCTTCEEEECC
T ss_pred Ccccccc-ccc---------ccchhhhhhheecCCeEEEEEe
Confidence 6888873 321 3578899999999999988744
No 330
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.02 E-value=0.048 Score=48.45 Aligned_cols=94 Identities=19% Similarity=0.188 Sum_probs=64.3
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-c----ccccc--
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-G----NALKA-- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~----D~~~~-- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++. . |..+.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVF-GAT----------DFVNPNDHSEPISQVLS 256 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT-TCC----------EEECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHh-CCc----------eEEeccccchhHHHHHH
Confidence 456788999999864 77777888765 55 899999999999998763 321 1111 1 11111
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCC-cEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKG-GRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pg-G~l~~~ 189 (269)
...+.+|+|+- ... ..+.++.+.+.|+++ |.+++.
T Consensus 257 ~~~~~g~D~vid-~~g---------~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 257 KMTNGGVDFSLE-CVG---------NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHTSCBSEEEE-CSC---------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEE-CCC---------CHHHHHHHHHHhhcCCcEEEEE
Confidence 12247999984 221 246789999999999 998764
No 331
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.97 E-value=0.014 Score=46.86 Aligned_cols=94 Identities=18% Similarity=0.109 Sum_probs=60.0
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc--cccc-c---c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG--NALK-A---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~--D~~~-~---~ 145 (269)
.+.+.++||++|+ |.|..+..+++. .+.+|++++.+++..+.+++. +. ...+-.. |..+ . .
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~-~G~~V~~~~~~~~~~~~~~~~-g~---------~~~~d~~~~~~~~~~~~~~ 103 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKM-IGARIYTTAGSDAKREMLSRL-GV---------EYVGDSRSVDFADEILELT 103 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHH-HTCEEEEEESSHHHHHHHHTT-CC---------SEEEETTCSTHHHHHHHHT
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHc-CC---------CEEeeCCcHHHHHHHHHHh
Confidence 4567889999995 445555555554 367999999999988877652 21 1111111 1111 1 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
....+|+|+..+ . .+.++.+.+.|+++|.++.-
T Consensus 104 ~~~~~D~vi~~~-g----------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 104 DGYGVDVVLNSL-A----------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TTCCEEEEEECC-C----------THHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEECC-c----------hHHHHHHHHHhccCCEEEEE
Confidence 234699998532 1 25788899999999988763
No 332
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.96 E-value=0.22 Score=43.70 Aligned_cols=121 Identities=12% Similarity=-0.035 Sum_probs=78.0
Q ss_pred CCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEE
Q 035593 78 PGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILV 155 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~ 155 (269)
..+++|+.||+|.+...+... .-..+.++|+|+..++..+.++.. .. .+|..++ ..-..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~--------~~----~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGE--------KP----EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSC--------CC----BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCC--------CC----cCCHHHcCHhhCCCCCEEEE
Confidence 468999999999999999873 233688899999999999998742 11 5888887 23346999998
Q ss_pred cCCCCCCC----CCCC------CcHHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH
Q 035593 156 DLFSKGSL----LSEL------EDPNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV 218 (269)
Q Consensus 156 d~~~~~~~----~~~l------~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (269)
+.+-.... ...+ .-.++++.+ +.++|.-+++=|+.+-.. .+....+..+++.|.+.
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i-~~~~P~~~~~ENV~gl~~------~~~~~~~~~i~~~l~~~ 143 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLFFDIARIV-REKKPKVVFMENVKNFAS------HDNGNTLEVVKNTMNEL 143 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHHHHHHHHH-HHHCCSEEEEEEEGGGGT------GGGGHHHHHHHHHHHHT
T ss_pred CCCCCCcchhcccCCCcchhhHHHHHHHHHH-HhccCcEEEEeCcHHHHh------ccccHHHHHHHHHHHhC
Confidence 75333211 1001 112455444 457898777778865321 01123456666666653
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.96 E-value=0.06 Score=47.82 Aligned_cols=94 Identities=17% Similarity=0.096 Sum_probs=64.2
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-c----ccccc--
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-G----NALKA-- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~----D~~~~-- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++. . |..+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-Ga~----------~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIEL-GAT----------ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHT-TCS----------EEECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHc-CCc----------EEEecccccchHHHHHH
Confidence 456789999999864 67777777764 55 899999999999998753 321 1111 1 11111
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCC-cEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKG-GRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pg-G~l~~~ 189 (269)
...+.+|+|+- ... ..+.++.+.+.|+++ |.++..
T Consensus 256 ~~t~gg~Dvvid-~~g---------~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 256 EKTNGGVDYAVE-CAG---------RIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHTTSCBSEEEE-CSC---------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEE-CCC---------CHHHHHHHHHHHhcCCCEEEEE
Confidence 12248999983 322 246889999999999 998764
No 334
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.94 E-value=0.06 Score=47.80 Aligned_cols=94 Identities=13% Similarity=0.147 Sum_probs=64.2
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-c----ccccc--
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-G----NALKA-- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~----D~~~~-- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++. . |..+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~~~~~ 255 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEV-GAT----------ECVNPQDYKKPIQEVLT 255 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT-TCS----------EEECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh-CCc----------eEecccccchhHHHHHH
Confidence 456789999999875 77777787765 55 899999999999998753 321 1111 1 11111
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCC-cEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKG-GRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pg-G~l~~~ 189 (269)
...+.+|+|+- ... ..+.++.+.+.|+++ |.+++-
T Consensus 256 ~~~~~g~D~vid-~~g---------~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 256 EMSNGGVDFSFE-VIG---------RLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHTTSCBSEEEE-CSC---------CHHHHHHHHHHBCTTTCEEEEC
T ss_pred HHhCCCCcEEEE-CCC---------CHHHHHHHHHHhhcCCcEEEEe
Confidence 12247999983 321 246788999999999 998764
No 335
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.91 E-value=0.041 Score=49.15 Aligned_cols=93 Identities=20% Similarity=0.174 Sum_probs=63.4
Q ss_pred CCCCCcEEEEcCc-ccHHHHHHHHHCCC-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc------cccc-c-
Q 035593 75 ILPPGPIGILGFG-AGSAARLILDLYPE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG------NALK-A- 144 (269)
Q Consensus 75 l~~~~~VL~iG~G-~G~~~~~l~~~~p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~------D~~~-~- 144 (269)
+.+..+||++|+| .|.++..+++.. + .+|++++.+++-.+.+++ ++.. .++.. |..+ .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~-lGa~----------~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEE-IGAD----------LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHH-TTCS----------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHH-cCCc----------EEEeccccCcchHHHHHH
Confidence 5678899999966 467777777765 6 599999999999999885 3321 12221 1111 1
Q ss_pred --ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 --SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 --~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.....+|+||-. .. ..+.++.+.+.|+++|.++.-
T Consensus 261 ~~~~g~g~Dvvid~-~g---------~~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 261 DITHGRGADFILEA-TG---------DSRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHTTTSCEEEEEEC-SS---------CTTHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCcEEEEC-CC---------CHHHHHHHHHHHhcCCEEEEE
Confidence 223479999843 22 124678889999999998764
No 336
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.87 E-value=0.07 Score=47.33 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=64.0
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-c----ccccc--
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-G----NALKA-- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~----D~~~~-- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++. . |..+.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~~~v~ 254 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEF-GAT----------ECINPQDFSKPIQEVLI 254 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHH-TCS----------EEECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHc-CCc----------eEeccccccccHHHHHH
Confidence 456788999999864 67777777754 55 899999999999998864 321 1111 1 11111
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCC-cEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKG-GRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pg-G~l~~~ 189 (269)
...+.+|+|+- ... ..+.++.+.+.|+++ |.+++.
T Consensus 255 ~~~~~g~D~vid-~~g---------~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 255 EMTDGGVDYSFE-CIG---------NVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHTTSCBSEEEE-CSC---------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEE-CCC---------cHHHHHHHHHhhccCCcEEEEE
Confidence 12247999984 321 246789999999999 998764
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.85 E-value=0.027 Score=50.17 Aligned_cols=94 Identities=17% Similarity=0.195 Sum_probs=64.4
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-c----ccccc--
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-G----NALKA-- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~----D~~~~-- 144 (269)
.+.+..+||++|+|+ |.++..+++.. ++ +|++++.+++-.+.+++. +.. .++. . |..+.
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-Ga~----------~vi~~~~~~~~~~~~v~ 259 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKAL-GAT----------DCLNPRELDKPVQDVIT 259 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT-TCS----------EEECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh-CCc----------EEEccccccchHHHHHH
Confidence 456788999999864 77777888765 55 899999999999998763 321 1111 1 11111
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCC-cEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKG-GRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pg-G~l~~~ 189 (269)
...+.+|+|+ |... ..+.++.+.+.|+++ |.+++.
T Consensus 260 ~~~~~g~Dvvi-d~~G---------~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 260 ELTAGGVDYSL-DCAG---------TAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHHTSCBSEEE-ESSC---------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCccEEE-ECCC---------CHHHHHHHHHHhhcCCCEEEEE
Confidence 1224799998 3322 246889999999999 998764
No 338
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.84 E-value=0.025 Score=50.75 Aligned_cols=102 Identities=17% Similarity=0.012 Sum_probs=70.6
Q ss_pred CcEEEEcCcccHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc---------cCC
Q 035593 79 GPIGILGFGAGSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS---------LKD 148 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~---------~~~ 148 (269)
-+++|+-||.|.++..+.+. +. .+.++|+|+..++..+.++. ...++.+|..++. ...
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~----------~~~~~~~DI~~~~~~~~~~~~~~~~ 70 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFP----------RSLHVQEDVSLLNAEIIKGFFKNDM 70 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCT----------TSEEECCCGGGCCHHHHHHHHCSCC
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCC----------CCceEecChhhcCHHHHHhhcccCC
Confidence 47999999999999999875 44 57799999999999888763 3578889998871 246
Q ss_pred CeeEEEEcCCCCCCC-CC--CCC------cHHHHHHHHhhccCCcEEEEEecCC
Q 035593 149 GFSGILVDLFSKGSL-LS--ELE------DPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~-~~--~l~------~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
.+|+|+.+.+-.... .. ... ..++++ +.+.++|.=+++=|+.+-
T Consensus 71 ~~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~-~v~~~~P~~~v~ENV~gl 123 (376)
T 3g7u_A 71 PIDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYR-LVSELQPLFFLAENVPGI 123 (376)
T ss_dssp CCCEEEECCCCCTTC-------CHHHHHHHHHHHH-HHHHHCCSEEEEEECTTT
T ss_pred CeeEEEecCCCCCcccccCCCCCCchHHHHHHHHH-HHHHhCCCEEEEecchHh
Confidence 899999875433211 00 111 123333 445678987777788654
No 339
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.82 E-value=0.07 Score=46.69 Aligned_cols=95 Identities=9% Similarity=0.082 Sum_probs=64.0
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc---c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~---~ 145 (269)
.+.+.++||++|+ |.|..+..+++.. +++|++++.+++-.+.+++.++.. ..+-.. |..+. .
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~---------~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFD---------DAFNYKEESDLTAALKRC 221 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCS---------EEEETTSCSCSHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCc---------eEEecCCHHHHHHHHHHH
Confidence 4567889999997 4667777777654 679999999999998888555421 111111 11111 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
..+.+|+|+.... .+.++.+.+.|+++|.+++.
T Consensus 222 ~~~~~d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 222 FPNGIDIYFENVG-----------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CTTCEEEEEESSC-----------HHHHHHHHTTEEEEEEEEEC
T ss_pred hCCCCcEEEECCC-----------HHHHHHHHHHHhcCCEEEEE
Confidence 2357999985321 25788899999999998763
No 340
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.76 E-value=0.067 Score=42.31 Aligned_cols=93 Identities=18% Similarity=0.123 Sum_probs=56.9
Q ss_pred CCcEEEEcCcc-c-HHHHHHHHHCC-CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----c--cCC
Q 035593 78 PGPIGILGFGA-G-SAARLILDLYP-EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----S--LKD 148 (269)
Q Consensus 78 ~~~VL~iG~G~-G-~~~~~l~~~~p-~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~--~~~ 148 (269)
..+|+++|+|. | .++..|.+ . +.+|+++|.+++.++.+++. + +.++.+|+.+. . .-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~~~~~~~~~~~-g-----------~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIREEAAQQHRSE-G-----------RNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESCHHHHHHHHHT-T-----------CCEEECCTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECCHHHHHHHHHC-C-----------CCEEEcCCCCHHHHHhccCCC
Confidence 56899999872 2 23334433 3 67899999999888776642 1 45667777543 2 245
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
.+|+|++...+.. .....-...+.+.|++.++....
T Consensus 105 ~ad~vi~~~~~~~-------~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 105 HVKLVLLAMPHHQ-------GNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CCCEEEECCSSHH-------HHHHHHHHHHHTTCCSEEEEEES
T ss_pred CCCEEEEeCCChH-------HHHHHHHHHHHHCCCCEEEEEEC
Confidence 7999997443210 12223334556677777776553
No 341
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.68 E-value=0.046 Score=49.64 Aligned_cols=93 Identities=18% Similarity=0.221 Sum_probs=62.3
Q ss_pred CCcEEEEcCcc-cH-HHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCe
Q 035593 78 PGPIGILGFGA-GS-AARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGF 150 (269)
Q Consensus 78 ~~~VL~iG~G~-G~-~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~y 150 (269)
..+|+++|+|. |. +++.|.+ .+..|++||.|++.++.+++. .+.++.+|+.+. ..-...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d~~~v~~~~~~------------g~~vi~GDat~~~~L~~agi~~A 69 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHDPDHIETLRKF------------GMKVFYGDATRMDLLESAGAAKA 69 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECCHHHHHHHHHT------------TCCCEESCTTCHHHHHHTTTTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHhC------------CCeEEEcCCCCHHHHHhcCCCcc
Confidence 45799999872 33 3333333 478999999999999988753 257888999875 234689
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|+|++...+.. .........+.+.|+..+++-..
T Consensus 70 ~~viv~~~~~~-------~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 70 EVLINAIDDPQ-------TNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp SEEEECCSSHH-------HHHHHHHHHHHHCTTCEEEEEES
T ss_pred CEEEECCCChH-------HHHHHHHHHHHhCCCCeEEEEEC
Confidence 99987543321 23445555666778776666554
No 342
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.67 E-value=0.064 Score=47.13 Aligned_cols=91 Identities=18% Similarity=0.161 Sum_probs=62.6
Q ss_pred CCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc----ccC
Q 035593 77 PPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA----SLK 147 (269)
Q Consensus 77 ~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~----~~~ 147 (269)
+..+||++|+|+ |..+..+++.. ++ +|++++.+++-.+.+++. +.. .++.. |..+. ...
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~-Ga~----------~~~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKV-GAD----------YVINPFEEDVVKEVMDITDG 234 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHH-TCS----------EEECTTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-CCC----------EEECCCCcCHHHHHHHHcCC
Confidence 789999999863 67777777764 66 999999999999988764 321 11111 11111 223
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
..+|+|+-.. . ..+.++.+.+.|+++|.++..
T Consensus 235 ~g~D~vid~~-g---------~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 235 NGVDVFLEFS-G---------APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp SCEEEEEECS-C---------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECC-C---------CHHHHHHHHHHHhcCCEEEEE
Confidence 4799998432 1 246788999999999988764
No 343
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.65 E-value=0.094 Score=40.22 Aligned_cols=97 Identities=12% Similarity=-0.037 Sum_probs=60.4
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECC-hHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCC
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELD-PSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDG 149 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEid-p~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~ 149 (269)
..+|+++|+| .++..+.+.. .+.+|+++|.+ ++..+..++.+. ..+.++.+|+.+. ..-+.
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---------DNADVIPGDSNDSSVLKKAGIDR 71 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---------TTCEEEESCTTSHHHHHHHTTTT
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc---------CCCeEEEcCCCCHHHHHHcChhh
Confidence 4689999864 4444444322 36799999998 454444443321 2478899998764 12467
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.|+|++...+.. .........+.+.|...++....+
T Consensus 72 ad~vi~~~~~d~-------~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 72 CRAILALSDNDA-------DNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp CSEEEECSSCHH-------HHHHHHHHHHHHTSSSCEEEECSS
T ss_pred CCEEEEecCChH-------HHHHHHHHHHHHCCCCEEEEEECC
Confidence 899987543211 234555566677777777776644
No 344
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.60 E-value=0.11 Score=38.59 Aligned_cols=91 Identities=14% Similarity=0.038 Sum_probs=53.9
Q ss_pred CcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCee
Q 035593 79 GPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGFS 151 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~yD 151 (269)
.+|+.+|+| .++..+++.. .+.+|+++|.+++.++..++.++ +.++.+|..+. ..-..+|
T Consensus 5 m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~-----------~~~~~~d~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 5 MYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID-----------ALVINGDCTKIKTLEDAGIEDAD 71 (140)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCS-----------SEEEESCTTSHHHHHHTTTTTCS
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcC-----------cEEEEcCCCCHHHHHHcCcccCC
Confidence 479999875 3443333221 36789999999988776654332 45566776543 1235799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+|++...+. .....+..+.+.+.++ .+++..
T Consensus 72 ~vi~~~~~~-------~~~~~~~~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 72 MYIAVTGKE-------EVNLMSSLLAKSYGIN-KTIARI 102 (140)
T ss_dssp EEEECCSCH-------HHHHHHHHHHHHTTCC-CEEEEC
T ss_pred EEEEeeCCc-------hHHHHHHHHHHHcCCC-EEEEEe
Confidence 999754321 1223445556667775 444433
No 345
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.55 E-value=0.12 Score=44.95 Aligned_cols=94 Identities=12% Similarity=0.102 Sum_probs=61.2
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcc---cccc---c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGN---ALKA---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D---~~~~---~ 145 (269)
.+.+.++||+.|+ |.|..+..+++. .+++|++++.+++-.+.+++ ++.. ..+-..| ..+. .
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~-~G~~V~~~~~~~~~~~~~~~-~g~~---------~~~d~~~~~~~~~~~~~~ 210 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKL-KGCKVVGAAGSDEKIAYLKQ-IGFD---------AAFNYKTVNSLEEALKKA 210 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH-TTCS---------EEEETTSCSCHHHHHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHh-cCCc---------EEEecCCHHHHHHHHHHH
Confidence 4557889999997 456666666664 36799999999998888844 3321 1111111 1111 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
..+.+|+++..+- .+.++.+.+.|+++|.+++.
T Consensus 211 ~~~~~d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 211 SPDGYDCYFDNVG-----------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CTTCEEEEEESSC-----------HHHHHHHHTTEEEEEEEEEC
T ss_pred hCCCCeEEEECCC-----------hHHHHHHHHHHhcCCEEEEE
Confidence 2257999985431 24578888999999998763
No 346
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.53 E-value=0.031 Score=43.18 Aligned_cols=100 Identities=13% Similarity=-0.003 Sum_probs=54.9
Q ss_pred CCCCCCCcEEEEcCcc-cHH-HHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----c-
Q 035593 73 PPILPPGPIGILGFGA-GSA-ARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----S- 145 (269)
Q Consensus 73 ~~l~~~~~VL~iG~G~-G~~-~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~- 145 (269)
|...+..+|+++|+|. |.. +..|.+ .+.+|+++|.+++.++.+++. ..+.++.+|..+. .
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~~~~~~~~~-----------~g~~~~~~d~~~~~~l~~~ 80 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEYAFHRLNSE-----------FSGFTVVGDAAEFETLKEC 80 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGGGGSCTT-----------CCSEEEESCTTSHHHHHTT
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHhc-----------CCCcEEEecCCCHHHHHHc
Confidence 3334678999999863 322 233333 367999999998765443211 1245666776442 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.-..+|+|+....+.. .......+.+.+.+...++....+
T Consensus 81 ~~~~ad~Vi~~~~~~~-------~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 81 GMEKADMVFAFTNDDS-------TNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp TGGGCSEEEECSSCHH-------HHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CcccCCEEEEEeCCcH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 1356899997543210 223344444555566666665543
No 347
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.49 E-value=0.12 Score=38.77 Aligned_cols=92 Identities=12% Similarity=0.023 Sum_probs=56.0
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCe
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGF 150 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~y 150 (269)
.++|+.+|+|. ++..+++.+ .+.+|+++|.+++.++.+++. .+.++.+|+.+. ..-..+
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------------~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------------GFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------------TCEEEECCTTCHHHHHHSCCTTC
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------------CCcEEECCCCCHHHHHhCCcccC
Confidence 45899999863 443333322 367999999999988776652 257788888764 123578
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
|+|++...+. ..........+.+. ...++.-..
T Consensus 72 d~vi~~~~~~-------~~n~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 72 SAVLITGSDD-------EFNLKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp SEEEECCSCH-------HHHHHHHHHHHHHC-CCCEEEEES
T ss_pred CEEEEecCCH-------HHHHHHHHHHHHhC-CceEEEEEc
Confidence 9998743321 01223334444555 555555553
No 348
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.48 E-value=0.022 Score=50.49 Aligned_cols=96 Identities=21% Similarity=0.178 Sum_probs=60.7
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccc-cc--ccCCC
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNAL-KA--SLKDG 149 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~-~~--~~~~~ 149 (269)
.+.+..+||++|+|+ |.++..+++.. +++|++++.+++-.+.+++ ++.. .++..+-. ++ ...+.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~-lGa~----------~v~~~~~~~~~~~~~~~~ 243 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK-MGAD----------HYIATLEEGDWGEKYFDT 243 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH-HTCS----------EEEEGGGTSCHHHHSCSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH-cCCC----------EEEcCcCchHHHHHhhcC
Confidence 356789999999853 67777777754 6789999999998898887 3421 12211111 22 11157
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+|+|+-..... . .+.++.+.+.|+++|.++.-
T Consensus 244 ~D~vid~~g~~---~-----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 244 FDLIVVCASSL---T-----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEEEECCSCS---T-----TCCTTTGGGGEEEEEEEEEC
T ss_pred CCEEEECCCCC---c-----HHHHHHHHHHhcCCCEEEEe
Confidence 99998433220 0 12344566789999988753
No 349
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.47 E-value=0.022 Score=49.97 Aligned_cols=94 Identities=10% Similarity=0.073 Sum_probs=61.5
Q ss_pred CCCCCCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc----
Q 035593 74 PILPPGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA---- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~---- 144 (269)
.+.+..+||++|+| .|..+..+++.. +++|++++.+++-.+.+++. +.. .++.. |..+.
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-ga~----------~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL-GAA----------YVIDTSTAPLYETVMEL 208 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH-TCS----------EEEETTTSCHHHHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC-CCc----------EEEeCCcccHHHHHHHH
Confidence 46678999999987 567777777654 67999999999999988874 321 11211 11111
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.....+|+|+-.+. ...+ ....+.|+++|.+++-.
T Consensus 209 ~~~~g~Dvvid~~g----------~~~~-~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSIG----------GPDG-NELAFSLRPNGHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESSC----------HHHH-HHHHHTEEEEEEEEECC
T ss_pred hCCCCCcEEEECCC----------ChhH-HHHHHHhcCCCEEEEEe
Confidence 23457999984321 1223 34458999999988743
No 350
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.47 E-value=0.06 Score=48.22 Aligned_cols=100 Identities=15% Similarity=0.235 Sum_probs=58.0
Q ss_pred CCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 77 PPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
++++|+++|+| .|..+..+++.+ +++|+++|.+++-++.+++.++. .+.+...+..++ ..-...|+|+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~---------~~~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCG---------RIHTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTT---------SSEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCC---------eeEeccCCHHHHHHHHcCCCEEE
Confidence 47899999986 233334444433 67999999999988888776542 122222121122 1123689999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
.....+....+++.. +.+.+.|+|||+++ |+.
T Consensus 237 ~~~~~p~~~t~~li~----~~~l~~mk~g~~iV-~va 268 (377)
T 2vhw_A 237 GAVLVPGAKAPKLVS----NSLVAHMKPGAVLV-DIA 268 (377)
T ss_dssp ECCCCTTSCCCCCBC----HHHHTTSCTTCEEE-EGG
T ss_pred ECCCcCCCCCcceec----HHHHhcCCCCcEEE-EEe
Confidence 754332211223333 34556788988764 553
No 351
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.46 E-value=0.076 Score=46.51 Aligned_cols=94 Identities=17% Similarity=0.264 Sum_probs=63.2
Q ss_pred CCCCCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE---ccccc-c-ccC
Q 035593 74 PILPPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV---GNALK-A-SLK 147 (269)
Q Consensus 74 ~l~~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~---~D~~~-~-~~~ 147 (269)
.+.+..+||++|+| .|..+..+++.. +++|++++.+++-.+.+++ ++.. .++. .|..+ . ...
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~-lGa~----------~~~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE-LGAD----------LVVNPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-TTCS----------EEECTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH-CCCC----------EEecCCCccHHHHHHHHh
Confidence 35578899999986 366777777754 6799999999999998876 3321 1111 11111 1 111
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+.+|+|+-.. . ..+.++.+.+.|+++|.++..
T Consensus 229 ~~~d~vid~~-g---------~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 229 GGVHAAVVTA-V---------SKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SSEEEEEESS-C---------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECC-C---------CHHHHHHHHHHhhcCCEEEEe
Confidence 5799998432 1 246788899999999988764
No 352
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.45 E-value=0.081 Score=43.17 Aligned_cols=91 Identities=9% Similarity=-0.081 Sum_probs=57.9
Q ss_pred cEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCeeE
Q 035593 80 PIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGFSG 152 (269)
Q Consensus 80 ~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~yD~ 152 (269)
+|+.+|+| .++..+++.. .+.+|+++|.|++.++...+.. .+.++.+|+.+. ..-...|+
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----------~~~~i~gd~~~~~~l~~a~i~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----------KATIIHGDGSHKEILRDAEVSKNDV 68 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----------SSEEEESCTTSHHHHHHHTCCTTCE
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----------CCeEEEcCCCCHHHHHhcCcccCCE
Confidence 68999875 4444444322 3679999999999887655443 257889998874 23467899
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
|++...+.. ...+.....+.+.+...++.-.
T Consensus 69 vi~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 69 VVILTPRDE-------VNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHTSCCCEEEECC
T ss_pred EEEecCCcH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 987543211 2344555556666666666544
No 353
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.36 E-value=0.054 Score=47.61 Aligned_cols=96 Identities=17% Similarity=0.235 Sum_probs=62.6
Q ss_pred CCCCCCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcc--ccc-c--cc
Q 035593 74 PILPPGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGN--ALK-A--SL 146 (269)
Q Consensus 74 ~l~~~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D--~~~-~--~~ 146 (269)
.+.+.++||++|+| .|..+..+++...+++|++++.+++-.+.+++. +.. ..+-..| ..+ . ..
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~~---------~~~~~~~~~~~~~~~~~~ 236 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GAD---------YVINASMQDPLAEIRRIT 236 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCS---------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCC---------EEecCCCccHHHHHHHHh
Confidence 35578899999987 455556666653367999999999999888763 321 1111111 111 1 11
Q ss_pred C-CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 147 K-DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 147 ~-~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
. +.+|+|+-.+- ..+.++.+.+.|+++|.++.-
T Consensus 237 ~~~~~d~vi~~~g----------~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 237 ESKGVDAVIDLNN----------SEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TTSCEEEEEESCC----------CHHHHTTGGGGEEEEEEEEEC
T ss_pred cCCCceEEEECCC----------CHHHHHHHHHHHhcCCEEEEE
Confidence 2 48999985321 245788889999999988763
No 354
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.35 E-value=0.031 Score=50.64 Aligned_cols=48 Identities=8% Similarity=-0.029 Sum_probs=41.3
Q ss_pred CCCCcEEEEcCcccHHHHHHH-HHCCC-ceEEEEECChHHHHHHHHhcCc
Q 035593 76 LPPGPIGILGFGAGSAARLIL-DLYPE-AVIHGWELDPSVIKVAREFFAL 123 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~-~~~p~-~~v~~vEidp~~~~~a~~~~~~ 123 (269)
.+...++|||++.|..+..++ +..+. .+|+++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 467899999999999999887 55654 7999999999999999987653
No 355
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.33 E-value=0.082 Score=46.11 Aligned_cols=93 Identities=15% Similarity=0.208 Sum_probs=63.2
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc----
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA---- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~---- 144 (269)
.+.+.++||++|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. .++.. |..+.
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-ga~----------~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY-GAE----------YLINASKEDILRQVLKF 212 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCS----------EEEETTTSCHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCc----------EEEeCCCchHHHHHHHH
Confidence 4567899999994 4567777777754 77999999999999988774 321 11211 11111
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.....+|+|+-... .+.++.+.+.|+++|.++..
T Consensus 213 ~~~~g~D~vid~~g-----------~~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 213 TNGKGVDASFDSVG-----------KDTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp TTTSCEEEEEECCG-----------GGGHHHHHHHEEEEEEEEEC
T ss_pred hCCCCceEEEECCC-----------hHHHHHHHHHhccCCEEEEE
Confidence 23457999984321 14678888999999998874
No 356
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.27 E-value=0.068 Score=47.51 Aligned_cols=98 Identities=18% Similarity=0.235 Sum_probs=57.0
Q ss_pred CCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 77 PPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
++++||++|+| .|..+..+++.. +++|+++|.+++-.+.+++.+.. .+.++..+..++ ..-..+|+|+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGS---------RVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGG---------GSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCc---------eeEeeeCCHHHHHHHHcCCCEEE
Confidence 35899999986 344444445543 56999999999988888766531 223332222222 1123689998
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
.....+....+.+.. +...+.|+++|+++-
T Consensus 236 ~~~~~~~~~~~~li~----~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 236 GAVLVPGRRAPILVP----ASLVEQMRTGSVIVD 265 (361)
T ss_dssp ECCCCTTSSCCCCBC----HHHHTTSCTTCEEEE
T ss_pred ECCCcCCCCCCeecC----HHHHhhCCCCCEEEE
Confidence 644322111223323 345567899887654
No 357
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.23 E-value=0.062 Score=47.20 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=61.4
Q ss_pred CCCcEEEEc-Cc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE--ccccc-c--ccCCC
Q 035593 77 PPGPIGILG-FG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV--GNALK-A--SLKDG 149 (269)
Q Consensus 77 ~~~~VL~iG-~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~--~D~~~-~--~~~~~ 149 (269)
+..+||++| +| .|..+..+++.. +++|++++.+++-.+.+++. +.. .++. .|..+ . ...+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM-GAD----------IVLNHKESLLNQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH-TCS----------EEECTTSCHHHHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCc----------EEEECCccHHHHHHHhCCCC
Confidence 678999995 33 567777777754 67999999999999998873 321 1111 11111 1 23457
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
+|+|+- ... ....++.+.+.|+++|.++.
T Consensus 218 ~Dvv~d-~~g---------~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 218 VDYVFC-TFN---------TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EEEEEE-SSC---------HHHHHHHHHHHEEEEEEEEE
T ss_pred ccEEEE-CCC---------chHHHHHHHHHhccCCEEEE
Confidence 999984 221 35678999999999999875
No 358
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.20 E-value=0.055 Score=48.00 Aligned_cols=94 Identities=19% Similarity=0.274 Sum_probs=59.9
Q ss_pred CC-CCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-cccccc-ccCCCe
Q 035593 75 IL-PPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-GNALKA-SLKDGF 150 (269)
Q Consensus 75 l~-~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~D~~~~-~~~~~y 150 (269)
+. +..+||++|+|+ |..+..+++.. +++|++++.+++-.+.+++.++.. .++. .+.... ...+.+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~----------~v~~~~~~~~~~~~~~~~ 252 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGAD----------SFLVSRDQEQMQAAAGTL 252 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCS----------EEEETTCHHHHHHTTTCE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCc----------eEEeccCHHHHHHhhCCC
Confidence 45 788999999763 66666777654 679999999998888887666531 1111 111111 222479
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|+|+-..... ..++.+.+.|+++|.++.-
T Consensus 253 D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 253 DGIIDTVSAV----------HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEEECCSSC----------CCSHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCcH----------HHHHHHHHHHhcCCEEEEE
Confidence 9998433211 1235566789999988753
No 359
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.16 E-value=0.058 Score=47.40 Aligned_cols=93 Identities=13% Similarity=0.081 Sum_probs=62.0
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccC
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLK 147 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~ 147 (269)
.+.+..+||++|+ |.|..+..+++.. +++|+++ .+++-.+.+++. +.. .+. ...|..+. ...
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l-Ga~--------~i~-~~~~~~~~~~~~~~~ 214 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL-GAT--------PID-ASREPEDYAAEHTAG 214 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH-TSE--------EEE-TTSCHHHHHHHHHTT
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc-CCC--------Eec-cCCCHHHHHHHHhcC
Confidence 4557899999994 4577777888754 7799999 899888888764 321 111 01111111 234
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
..+|+|+- ... .+.+..+.+.|+++|.++..
T Consensus 215 ~g~D~vid-~~g----------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYD-TLG----------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp SCEEEEEE-SSC----------THHHHHHHHHEEEEEEEEES
T ss_pred CCceEEEE-CCC----------cHHHHHHHHHHhcCCeEEEE
Confidence 57999874 321 25788888999999998863
No 360
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.12 E-value=0.089 Score=45.72 Aligned_cols=94 Identities=14% Similarity=0.017 Sum_probs=63.4
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-------
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA------- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~------- 144 (269)
.+.+..+||++|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. .++..+-.++
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-Ga~----------~~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL-GAW----------ETIDYSHEDVAKRVLEL 204 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH-TCS----------EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCC----------EEEeCCCccHHHHHHHH
Confidence 4567899999993 4577777777753 67999999999999998864 321 1121111111
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.....+|+|+-... .+.++.+.+.|+++|.+++-.
T Consensus 205 ~~~~g~Dvvid~~g-----------~~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 205 TDGKKCPVVYDGVG-----------QDTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TTTCCEEEEEESSC-----------GGGHHHHHTTEEEEEEEEECC
T ss_pred hCCCCceEEEECCC-----------hHHHHHHHHHhcCCCEEEEEe
Confidence 23457999984321 146778889999999988743
No 361
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.11 E-value=0.098 Score=45.91 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=62.3
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc---c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~---~ 145 (269)
.+.+.++||++|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. ..+-.. +..+. .
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~-g~~---------~~~d~~~~~~~~~~~~~~ 234 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI-GGE---------VFIDFTKEKDIVGAVLKA 234 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT-TCC---------EEEETTTCSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc-CCc---------eEEecCccHhHHHHHHHH
Confidence 3557889999998 4566666666653 67999999999888888763 311 111111 11111 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
..+.+|+|+.... ..+.++.+.+.|+++|.++.-
T Consensus 235 ~~~~~D~vi~~~g----------~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 235 TDGGAHGVINVSV----------SEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HTSCEEEEEECSS----------CHHHHHHHTTSEEEEEEEEEC
T ss_pred hCCCCCEEEECCC----------cHHHHHHHHHHHhcCCEEEEE
Confidence 1227999985332 246889999999999988753
No 362
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.06 E-value=0.14 Score=45.33 Aligned_cols=93 Identities=10% Similarity=0.044 Sum_probs=63.8
Q ss_pred CCCCCCcEEEEc--CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc---c
Q 035593 74 PILPPGPIGILG--FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG--~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~---~ 145 (269)
.+.+..+||++| +|.|..+..+++.. +++|++++.+++-.+.+++ ++.. .++.. |..+. .
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~-~Ga~----------~~~~~~~~~~~~~~~~~ 227 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS-LGCD----------RPINYKTEPVGTVLKQE 227 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TTCS----------EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-cCCc----------EEEecCChhHHHHHHHh
Confidence 356788999999 45777888888764 6799999999998888886 3321 11111 11111 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
....+|+|+-.. . .+.++.+.+.|+++|.+++.
T Consensus 228 ~~~g~D~vid~~-g----------~~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 228 YPEGVDVVYESV-G----------GAMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp CTTCEEEEEECS-C----------THHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCEEEECC-C----------HHHHHHHHHHHhcCCEEEEE
Confidence 235799998432 1 15788899999999988763
No 363
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.02 E-value=0.1 Score=45.76 Aligned_cols=93 Identities=17% Similarity=0.162 Sum_probs=63.0
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcc--cccc----c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGN--ALKA----S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D--~~~~----~ 145 (269)
.+.+..+||++|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. .++..+ ..+. .
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-ga~----------~v~~~~~~~~~~v~~~~ 223 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV-GAD----------IVLPLEEGWAKAVREAT 223 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-TCS----------EEEESSTTHHHHHHHHT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCc----------EEecCchhHHHHHHHHh
Confidence 4567899999997 4577777787764 67999999999988888874 321 122222 2111 2
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
....+|+|+-... . +.++.+.+.|+++|.+++-
T Consensus 224 ~~~g~Dvvid~~g-~----------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 224 GGAGVDMVVDPIG-G----------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp TTSCEEEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCc-h----------hHHHHHHHhhcCCCEEEEE
Confidence 3347999984322 1 2467788899999998763
No 364
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.00 E-value=0.059 Score=47.28 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=62.1
Q ss_pred CCCCCCcEEEEcCcc-cHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE---cccccc---c
Q 035593 74 PILPPGPIGILGFGA-GSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV---GNALKA---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~G~-G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~---~D~~~~---~ 145 (269)
.+ +..+||++|+|+ |..+..+++.. ++ +|++++.+++-.+.+++. . . .++. .|..+. .
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a-~----------~v~~~~~~~~~~~~~~~ 227 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-A-D----------RLVNPLEEDLLEVVRRV 227 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-C-S----------EEECTTTSCHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-H-H----------hccCcCccCHHHHHHHh
Confidence 45 889999999853 67777777764 66 899999999887777654 2 1 1111 111111 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
....+|+|+- ... ..+.++.+.+.|+++|.++..
T Consensus 228 ~~~g~D~vid-~~g---------~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 228 TGSGVEVLLE-FSG---------NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp HSSCEEEEEE-CSC---------CHHHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCEEEE-CCC---------CHHHHHHHHHHHhcCCEEEEE
Confidence 1457999984 221 246788999999999988764
No 365
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.99 E-value=0.049 Score=48.85 Aligned_cols=42 Identities=29% Similarity=0.432 Sum_probs=32.3
Q ss_pred CCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHH
Q 035593 77 PPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVARE 119 (269)
Q Consensus 77 ~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~ 119 (269)
++.+|++||+| .|..+..+++.+ +++|+++|.+++..+.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 57899999998 444444444433 6799999999998888876
No 366
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=94.94 E-value=0.037 Score=47.39 Aligned_cols=113 Identities=11% Similarity=-0.023 Sum_probs=70.4
Q ss_pred CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEE----------EccccccccCCCeeEEEE
Q 035593 86 FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVY----------VGNALKASLKDGFSGILV 155 (269)
Q Consensus 86 ~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~----------~~D~~~~~~~~~yD~I~~ 155 (269)
++.|-...++.+ .++-+|..||-.= .++ ..||+.+ ..|...-...++||+|++
T Consensus 150 ~~~~~~~~~~~k-~~g~~vl~v~~~~----------~~p------~k~v~wi~Pi~GAt~~~~lDfg~p~~~~k~DvV~S 212 (320)
T 2hwk_A 150 HPQSDFSSFVSK-LKGRTVLVVGEKL----------SVP------GKMVDWLSDRPEATFRARLDLGIPGDVPKYDIIFV 212 (320)
T ss_dssp CCCCCCHHHHHT-SSCSEEEEEESCC----------CCT------TSEEEEEESSTTCSEECCGGGCSCTTSCCEEEEEE
T ss_pred cCCCCHHHHHhh-CCCcEEEEEeccc----------ccC------CceeEeeccCCCceeecccccCCccccCcCCEEEE
Confidence 455666666655 6788888885321 121 1233333 344333333478999999
Q ss_pred cCCCCCCCCCCCC---c-----HHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHHhcCceEEEE
Q 035593 156 DLFSKGSLLSELE---D-----PNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKVFGKKLYVLS 227 (269)
Q Consensus 156 d~~~~~~~~~~l~---~-----~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~ 227 (269)
|...+... .+.. . .-..+.+.++|+|||.+++-+++.. +.....++..|++.|. .+..++
T Consensus 213 DMApn~sG-h~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga----------Dr~se~lv~~LaR~F~-~Vr~vK 280 (320)
T 2hwk_A 213 NVRTPYKY-HHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA----------DRASESIIGAIARQFK-FSRVCK 280 (320)
T ss_dssp ECCCCCCS-CHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC----------SHHHHHHHHHHHTTEE-EEEEEC
T ss_pred cCCCCCCC-ccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC----------cccHHHHHHHHHHhcc-eeeeeC
Confidence 97654221 1100 0 0156677899999999999998752 3456788999999995 677774
No 367
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.83 E-value=0.052 Score=48.00 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=60.5
Q ss_pred CC-CCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCee
Q 035593 75 IL-PPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFS 151 (269)
Q Consensus 75 l~-~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD 151 (269)
+. +..+||++|+| .|.++..+++.. +++|++++.+++-.+.+++.++.. .+ +-..|.... ...+.+|
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~--------~v-i~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGAD--------DY-VIGSDQAKMSELADSLD 246 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCS--------CE-EETTCHHHHHHSTTTEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCc--------ee-eccccHHHHHHhcCCCC
Confidence 45 78899999976 356666677654 679999999999888888666532 11 111111111 2234799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+|+- ..... +.++.+.+.|+++|.++.-
T Consensus 247 ~vid-~~g~~---------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 247 YVID-TVPVH---------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEE-CCCSC---------CCSHHHHTTEEEEEEEEEC
T ss_pred EEEE-CCCCh---------HHHHHHHHHhccCCEEEEe
Confidence 9984 32211 1345667889999998764
No 368
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.80 E-value=0.079 Score=47.93 Aligned_cols=43 Identities=23% Similarity=0.325 Sum_probs=33.6
Q ss_pred CCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHh
Q 035593 77 PPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREF 120 (269)
Q Consensus 77 ~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~ 120 (269)
++.+|++||+| .|..+..+++.+ +++|+++|+++...+.+++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~ 232 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASL 232 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc
Confidence 47899999998 455555555544 77999999999998888773
No 369
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.75 E-value=0.13 Score=44.46 Aligned_cols=88 Identities=15% Similarity=0.150 Sum_probs=60.3
Q ss_pred cEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEE
Q 035593 80 PIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILV 155 (269)
Q Consensus 80 ~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~ 155 (269)
+||++|+ |.|.++..+++.. +++|++++.+++-.+.+++. +.. ..+-..+.... .....+|+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~~~~d~v~- 216 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL-GAN---------RILSRDEFAESRPLEKQLWAGAI- 216 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH-TCS---------EEEEGGGSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCC---------EEEecCCHHHHHhhcCCCccEEE-
Confidence 5999996 4688888888864 67999999999999998874 321 11111111111 2335799886
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
|+.. .+.++.+.+.|+++|.++.-
T Consensus 217 d~~g----------~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 217 DTVG----------DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp ESSC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred ECCC----------cHHHHHHHHHHhcCCEEEEE
Confidence 4321 34889999999999998764
No 370
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.71 E-value=0.13 Score=45.82 Aligned_cols=100 Identities=16% Similarity=0.222 Sum_probs=55.4
Q ss_pred CCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 77 PPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
++++|+++|+| .|..+..+++. -+++|+++|.+++-.+.+++.++. .+.....+..++ ..-...|+|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~-~Ga~V~~~d~~~~~~~~~~~~~g~---------~~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALG-MGAQVTILDVNHKRLQYLDDVFGG---------RVITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHTTT---------SEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHHhcCc---------eEEEecCCHHHHHHHHhCCCEEE
Confidence 36899999985 23333333333 367999999999988877765531 233322222222 1223689998
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
..+..+....+++.. +.+.+.+++||+++ |+.
T Consensus 235 ~~~g~~~~~~~~li~----~~~l~~mk~gg~iV-~v~ 266 (369)
T 2eez_A 235 GAVLVPGAKAPKLVT----RDMLSLMKEGAVIV-DVA 266 (369)
T ss_dssp ECCC-------CCSC----HHHHTTSCTTCEEE-ECC
T ss_pred ECCCCCccccchhHH----HHHHHhhcCCCEEE-EEe
Confidence 754422111223333 44556778888754 543
No 371
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.69 E-value=0.041 Score=48.18 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=45.2
Q ss_pred CCcEEEEEcccccc---ccCCCeeEEEEcCCCCCCCCCCC----------CcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 131 PDRLFVYVGNALKA---SLKDGFSGILVDLFSKGSLLSEL----------EDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 131 ~~rv~~~~~D~~~~---~~~~~yD~I~~d~~~~~~~~~~l----------~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
..+.+++++|+.+. ...+++|+|++|.+-........ ...+.++.+++.|+|||.+++++...
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 46789999999875 34678999999864322110000 23578889999999999999988654
No 372
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.64 E-value=0.14 Score=44.60 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=60.8
Q ss_pred CCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 78 PGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 78 ~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
..+|..||+| ++.++..+.+.....+|+++|.+++.++.+++. +.. .....|..+. .-...|+|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~~----------~~~~~~~~~~-~~~~aDvVil 100 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GII----------DEGTTSIAKV-EDFSPDFVML 100 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSC----------SEEESCTTGG-GGGCCSEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CCc----------chhcCCHHHH-hhccCCEEEE
Confidence 3689999998 566677776632223899999999988887653 211 0112232220 2346899998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
..... ...+.++.+...|+++.++ +++.+
T Consensus 101 avp~~-------~~~~vl~~l~~~l~~~~iv-~d~~S 129 (314)
T 3ggo_A 101 SSPVR-------TFREIAKKLSYILSEDATV-TDQGS 129 (314)
T ss_dssp CSCGG-------GHHHHHHHHHHHSCTTCEE-EECCS
T ss_pred eCCHH-------HHHHHHHHHhhccCCCcEE-EECCC
Confidence 54322 1467889999999887654 55544
No 373
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.56 E-value=0.35 Score=42.45 Aligned_cols=120 Identities=13% Similarity=-0.009 Sum_probs=76.1
Q ss_pred CcEEEEcCcccHHHHHHHHHCCC-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc----cCCCeeEE
Q 035593 79 GPIGILGFGAGSAARLILDLYPE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS----LKDGFSGI 153 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~----~~~~yD~I 153 (269)
-+++|+-||.|.+...+.+..-+ ..|.++|+|+...+.-+.+++ ...++.+|..++. ....+|+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~~DI~~~~~~~~~~~~~D~l 73 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP----------ETNLLNRNIQQLTPQVIKKWNVDTI 73 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----------TSCEECCCGGGCCHHHHHHTTCCEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC----------CCceeccccccCCHHHhccCCCCEE
Confidence 47999999999999998875322 368899999999999998874 2346778988872 22369999
Q ss_pred EEcCCCCCCC--------C--CCCCcHHHHHHHHhhcc-CCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH
Q 035593 154 LVDLFSKGSL--------L--SELEDPNTWEKLRQCLR-KGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV 218 (269)
Q Consensus 154 ~~d~~~~~~~--------~--~~l~~~e~~~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (269)
+...+-.... . ..-.-.++++ +.+.++ |.=+++=|+.+-.. ......+++.|.+.
T Consensus 74 ~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r-~i~~~~~P~~~vlENV~gl~~---------~~~~~~i~~~l~~~ 139 (333)
T 4h0n_A 74 LMSPPCQPFTRNGKYLDDNDPRTNSFLYLIG-ILDQLDNVDYILMENVKGFEN---------STVRNLFIDKLKEC 139 (333)
T ss_dssp EECCCCCCSEETTEECCTTCTTSCCHHHHHH-HGGGCTTCCEEEEEECTTGGG---------SHHHHHHHHHHHHT
T ss_pred EecCCCcchhhhhhccCCcCcccccHHHHHH-HHHHhcCCCEEEEecchhhhh---------hhHHHHHHHHHHhC
Confidence 9754332110 0 0011124444 344555 87777778865321 22355566666553
No 374
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.56 E-value=0.093 Score=45.98 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=62.3
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---cccc-c---
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALK-A--- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~-~--- 144 (269)
.+.+..+||++|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. .++.. |..+ .
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-ga~----------~~~d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL-GAD----------ETVNYTHPDWPKEVRRL 230 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCS----------EEEETTSTTHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-CCC----------EEEcCCcccHHHHHHHH
Confidence 3557889999998 5677777777754 67999999999999988763 321 11111 1111 1
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.....+|+|+-.+- . +.++.+.+.|+++|.++.-
T Consensus 231 ~~~~~~d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 231 TGGKGADKVVDHTG-A----------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TTTTCEEEEEESSC-S----------SSHHHHHHHEEEEEEEEES
T ss_pred hCCCCceEEEECCC-H----------HHHHHHHHhhccCCEEEEE
Confidence 22357999985432 1 2467788899999988763
No 375
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.51 E-value=0.11 Score=45.79 Aligned_cols=93 Identities=23% Similarity=0.167 Sum_probs=61.6
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---cccc-c---
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALK-A--- 144 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~-~--- 144 (269)
.+.+.++||+.|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. .++.. |..+ .
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-ga~----------~~~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN-GAH----------EVFNHREVNYIDKIKKY 234 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCS----------EEEETTSTTHHHHHHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc-CCC----------EEEeCCCchHHHHHHHH
Confidence 4567899999996 4566666666653 67999999999988887653 311 11111 1111 1
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.....+|+|+..+. .+.+..+.+.|+++|.+++-
T Consensus 235 ~~~~~~D~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 235 VGEKGIDIIIEMLA-----------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HCTTCEEEEEESCH-----------HHHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCcEEEEECCC-----------hHHHHHHHHhccCCCEEEEE
Confidence 22347999985321 24577888999999998764
No 376
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.38 E-value=0.2 Score=44.12 Aligned_cols=94 Identities=14% Similarity=0.052 Sum_probs=62.6
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc------c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA------S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~------~ 145 (269)
.+.+..+||++|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. .++..+-.++ .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~----------~~~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL-GAK----------RGINYRSEDFAAVIKAE 231 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCS----------EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCC----------EEEeCCchHHHHHHHHH
Confidence 4567889999963 4577777777754 77999999999999988874 321 1121111111 1
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
....+|+|+-.+. .+.++.+.+.|+++|.++.-.
T Consensus 232 ~~~g~Dvvid~~g-----------~~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 232 TGQGVDIILDMIG-----------AAYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HSSCEEEEEESCC-----------GGGHHHHHHTEEEEEEEEECC
T ss_pred hCCCceEEEECCC-----------HHHHHHHHHHhccCCEEEEEE
Confidence 2567999984321 135778889999999987643
No 377
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.36 E-value=0.2 Score=43.45 Aligned_cols=94 Identities=15% Similarity=0.106 Sum_probs=60.9
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcc--ccc-c---c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGN--ALK-A---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D--~~~-~---~ 145 (269)
.+.+.++||+.|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. ..+-..| ..+ . .
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~-g~~---------~~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKA-GAW---------QVINYREEDLVERLKEIT 205 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH-TCS---------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-CCC---------EEEECCCccHHHHHHHHh
Confidence 4557889999994 4556666666543 67999999999988888763 311 1111111 111 1 2
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
....+|+|+..+- .+.++.+.+.|+++|.++..
T Consensus 206 ~~~~~D~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 206 GGKKVRVVYDSVG-----------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp TTCCEEEEEECSC-----------GGGHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCc-----------hHHHHHHHHHhcCCCEEEEE
Confidence 2347999985432 24678889999999988764
No 378
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.30 E-value=0.47 Score=41.55 Aligned_cols=121 Identities=12% Similarity=-0.011 Sum_probs=74.9
Q ss_pred CCcEEEEcCcccHHHHHHHHHCCC-ceE-EEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc----cCCCee
Q 035593 78 PGPIGILGFGAGSAARLILDLYPE-AVI-HGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS----LKDGFS 151 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p~-~~v-~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~----~~~~yD 151 (269)
+-+++|+-||.|.+...+.+..-. ..+ .++|+|+...+..+.+++. . ++.+|..++. ....+|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~--------~---~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE--------E---VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC--------C---CBCCCTTTCCHHHHHHTCCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC--------C---cccCChhhcCHHHhccCCCC
Confidence 458999999999999998874211 345 6999999999999988741 1 5678888772 123799
Q ss_pred EEEEcCCCCCC------CCCCC-CcH-HHHHHHHh----hc--cCCcEEEEEecCCCccccccccchhHHHHHHHHHHHH
Q 035593 152 GILVDLFSKGS------LLSEL-EDP-NTWEKLRQ----CL--RKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHK 217 (269)
Q Consensus 152 ~I~~d~~~~~~------~~~~l-~~~-e~~~~~~~----~L--~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (269)
+|+...+-... ....+ ... ..|..+.+ .+ +|.=+++=|+.+-.. ...+..+++.|.+
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~---------~~~~~~i~~~l~~ 149 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKE---------SLVFKEIYNILIK 149 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGG---------SHHHHHHHHHHHH
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcC---------hHHHHHHHHHHHh
Confidence 99976442221 01111 111 33333333 55 676666668754321 2345566666655
Q ss_pred H
Q 035593 218 V 218 (269)
Q Consensus 218 ~ 218 (269)
.
T Consensus 150 ~ 150 (327)
T 3qv2_A 150 N 150 (327)
T ss_dssp T
T ss_pred C
Confidence 3
No 379
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.21 E-value=0.059 Score=46.47 Aligned_cols=61 Identities=20% Similarity=0.211 Sum_probs=42.0
Q ss_pred CcEEEEEcccccc---ccCCCeeEEEEcCCCCCCC--C---CCC-----------CcHHHHHHHHhhccCCcEEEEEecC
Q 035593 132 DRLFVYVGNALKA---SLKDGFSGILVDLFSKGSL--L---SEL-----------EDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 132 ~rv~~~~~D~~~~---~~~~~yD~I~~d~~~~~~~--~---~~l-----------~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.+++++++|+.++ ..+++||+|++|.+-.... . ..+ ...++++++++.|+|||.+++++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 4689999999986 2457899999986432111 0 000 0134677899999999999998754
No 380
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.18 E-value=0.12 Score=45.10 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=61.8
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc--cccc-c---c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG--NALK-A---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~--D~~~-~---~ 145 (269)
.+.+.++||+.|+ |.|..+..+++.. +++|++++.+++-.+.+++. +.. ..+-.. |..+ . .
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-g~~---------~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL-GCH---------HTINYSTQDFAEVVREIT 210 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCS---------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCC---------EEEECCCHHHHHHHHHHh
Confidence 4557889999995 5677777777654 67999999999888888763 311 111111 1111 1 2
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
....+|+|+..+-. +.++.+.+.|+++|.++.-
T Consensus 211 ~~~~~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 211 GGKGVDVVYDSIGK-----------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp TTCCEEEEEECSCT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 23579999854321 3577888999999988764
No 381
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.12 E-value=0.28 Score=43.17 Aligned_cols=94 Identities=18% Similarity=0.151 Sum_probs=60.5
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc--cccc-c---c
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG--NALK-A---S 145 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~--D~~~-~---~ 145 (269)
.+.+.++||++|+ |.|..+..+++. .+++|++++.+++-.+.+++. +.. ..+-.. |..+ . .
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~~-g~~---------~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRM-AGAIPLVTAGSQKKLQMAEKL-GAA---------AGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHH-TCS---------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHc-CCc---------EEEecCChHHHHHHHHHh
Confidence 3557889999984 456666666665 367999999999998888553 321 111111 1111 1 2
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 146 LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
....+|+|+-.+.. +.++.+.+.|+++|.+++-
T Consensus 228 ~~~~~d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 228 KGAGVNLILDCIGG-----------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TTSCEEEEEESSCG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred cCCCceEEEECCCc-----------hHHHHHHHhccCCCEEEEE
Confidence 23479999854321 2467778899999998764
No 382
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.12 E-value=0.11 Score=44.47 Aligned_cols=90 Identities=14% Similarity=0.099 Sum_probs=61.0
Q ss_pred CCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccc-ccc-ccCCCe
Q 035593 75 ILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNA-LKA-SLKDGF 150 (269)
Q Consensus 75 l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~-~~~-~~~~~y 150 (269)
+.+..+||++|+ |.|..+..+++.. +++|++++.+++-.+.+++ ++.. .++..+- .++ ..-+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~-~ga~----------~~~~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA-LGAE----------EAATYAEVPERAKAWGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH-TTCS----------EEEEGGGHHHHHHHTTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-cCCC----------EEEECCcchhHHHHhcCc
Confidence 667899999997 4567777777764 6799999999998888876 3321 1221111 122 111579
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
|+|+- .. . +.++.+.+.|+++|.++.
T Consensus 191 d~vid-~g-~----------~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 191 DLVLE-VR-G----------KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp EEEEE-CS-C----------TTHHHHHTTEEEEEEEEE
T ss_pred eEEEE-CC-H----------HHHHHHHHhhccCCEEEE
Confidence 99985 32 1 246788899999998875
No 383
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.11 E-value=0.18 Score=44.47 Aligned_cols=92 Identities=13% Similarity=0.013 Sum_probs=59.0
Q ss_pred CcEEEEcCc-ccHHH-HHHH-HHCCCce-EEEEECChH---HHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCe
Q 035593 79 GPIGILGFG-AGSAA-RLIL-DLYPEAV-IHGWELDPS---VIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGF 150 (269)
Q Consensus 79 ~~VL~iG~G-~G~~~-~~l~-~~~p~~~-v~~vEidp~---~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~y 150 (269)
.+||++|+| .|.++ ..++ +. -+++ |++++.+++ -.+.+++ ++... +.....|..+. ...+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~-~Ga~~Vi~~~~~~~~~~~~~~~~~-lGa~~--------v~~~~~~~~~i~~~~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD-KGYENLYCLGRRDRPDPTIDIIEE-LDATY--------VDSRQTPVEDVPDVYEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT-TCCCEEEEEECCCSSCHHHHHHHH-TTCEE--------EETTTSCGGGHHHHSCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHH-cCCcEEEEEeCCcccHHHHHHHHH-cCCcc--------cCCCccCHHHHHHhCCCC
Confidence 899999975 36666 7777 64 3665 999999998 8888875 34211 10000111111 112379
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
|+|+ |... ....++.+.+.|+++|.++.-.
T Consensus 244 Dvvi-d~~g---------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 244 DFIY-EATG---------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEE-ECSC---------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEE-ECCC---------ChHHHHHHHHHHhcCCEEEEEe
Confidence 9998 3322 2457889999999999987643
No 384
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.06 E-value=0.11 Score=46.21 Aligned_cols=90 Identities=17% Similarity=0.146 Sum_probs=60.5
Q ss_pred CCCCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE---cccccc---ccC
Q 035593 76 LPPGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV---GNALKA---SLK 147 (269)
Q Consensus 76 ~~~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~---~D~~~~---~~~ 147 (269)
.+..+||++|++ .|.++..+++.. +++|+++- +++-.+.+++. +.. .++. .|..+. ...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l-Ga~----------~vi~~~~~~~~~~v~~~t~ 229 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR-GAE----------EVFDYRAPNLAQTIRTYTK 229 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT-TCS----------EEEETTSTTHHHHHHHHTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc-CCc----------EEEECCCchHHHHHHHHcc
Confidence 567899999983 688888888864 67888884 88888888764 321 1222 122111 223
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhc-cCCcEEEE
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCL-RKGGRIMV 188 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L-~pgG~l~~ 188 (269)
+.+|+|+ |+.. ..+.++.+.+.| +++|.++.
T Consensus 230 g~~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 230 NNLRYAL-DCIT---------NVESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp TCCCEEE-ESSC---------SHHHHHHHHHHSCTTCEEEEE
T ss_pred CCccEEE-ECCC---------chHHHHHHHHHhhcCCCEEEE
Confidence 4599998 4322 246788888899 69998876
No 385
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.91 E-value=0.14 Score=45.82 Aligned_cols=44 Identities=20% Similarity=0.336 Sum_probs=33.0
Q ss_pred CCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC
Q 035593 77 PPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFA 122 (269)
Q Consensus 77 ~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~ 122 (269)
++.+|+++|+| .|..+..+++.+ +++|+++|.++...+.+++ ++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~-~G 215 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES-LG 215 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH-TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-cC
Confidence 58899999997 444455555554 5689999999988887766 44
No 386
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.74 E-value=0.41 Score=42.01 Aligned_cols=95 Identities=13% Similarity=0.072 Sum_probs=62.1
Q ss_pred CCCCC--CcEEEEcC--cccHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc--cccc-c-
Q 035593 74 PILPP--GPIGILGF--GAGSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG--NALK-A- 144 (269)
Q Consensus 74 ~l~~~--~~VL~iG~--G~G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~--D~~~-~- 144 (269)
.+.+. ++||+.|+ |.|..+..+++.. ++ +|++++.+++-.+.+++.++.. ..+-.. |..+ .
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~---------~~~d~~~~~~~~~~~ 224 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFD---------AAINYKKDNVAEQLR 224 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCS---------EEEETTTSCHHHHHH
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc---------eEEecCchHHHHHHH
Confidence 35567 89999997 4556666666653 67 9999999998888887755421 111111 1111 1
Q ss_pred -ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 145 -SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 145 -~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
...+.+|+++..+- .+.++.+.+.|+++|.+++.
T Consensus 225 ~~~~~~~d~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 225 ESCPAGVDVYFDNVG-----------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHCTTCEEEEEESCC-----------HHHHHHHHHTEEEEEEEEEC
T ss_pred HhcCCCCCEEEECCC-----------HHHHHHHHHHhccCcEEEEE
Confidence 12237999985321 26788899999999998763
No 387
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.50 E-value=0.25 Score=42.69 Aligned_cols=69 Identities=17% Similarity=0.085 Sum_probs=53.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCce---EEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc-----cCC
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAV---IHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS-----LKD 148 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~---v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~~ 148 (269)
.+.+++|+=||.|.+...+.+. +.+ |.++|+|+...+..+.++. ...++.+|..++. ...
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a--G~~~~~v~a~E~d~~a~~ty~~N~~----------~~~~~~~DI~~i~~~~i~~~~ 82 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL--GIQVDRYIASEVCEDSITVGMVRHQ----------GKIMYVGDVRSVTQKHIQEWG 82 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT--TBCEEEEEEECCCHHHHHHHHHHTT----------TCEEEECCGGGCCHHHHHHTC
T ss_pred CCCEEEEeCcCccHHHHHHHHC--CCccceEEEEECCHHHHHHHHHhCC----------CCceeCCChHHccHHHhcccC
Confidence 3668999999999999988873 443 5899999999988887763 2467889999872 124
Q ss_pred CeeEEEEcC
Q 035593 149 GFSGILVDL 157 (269)
Q Consensus 149 ~yD~I~~d~ 157 (269)
.+|+|+...
T Consensus 83 ~~Dll~ggp 91 (295)
T 2qrv_A 83 PFDLVIGGS 91 (295)
T ss_dssp CCSEEEECC
T ss_pred CcCEEEecC
Confidence 799999754
No 388
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.45 E-value=0.54 Score=40.74 Aligned_cols=96 Identities=11% Similarity=0.079 Sum_probs=58.0
Q ss_pred CCCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEE-----EccccccccCCC
Q 035593 77 PPGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVY-----VGNALKASLKDG 149 (269)
Q Consensus 77 ~~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~-----~~D~~~~~~~~~ 149 (269)
...+|++||+| ++.++..|++ .+.+|+.+ .+++.++..++. ++... .+...+. ..|. .....
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~--~G~~V~l~-~~~~~~~~i~~~-g~~~~----~~~~~~~~~~~~~~~~---~~~~~ 86 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR--AGHEVILI-ARPQHVQAIEAT-GLRLE----TQSFDEQVKVSASSDP---SAVQG 86 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH--TTCEEEEE-CCHHHHHHHHHH-CEEEE----CSSCEEEECCEEESCG---GGGTT
T ss_pred cCCcEEEECcCHHHHHHHHHHHH--CCCeEEEE-EcHhHHHHHHhC-CeEEE----cCCCcEEEeeeeeCCH---HHcCC
Confidence 45689999998 4445555555 36689999 999888777654 21110 1111111 1121 12357
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+|+|++..... ...+.++.+...|+++.+++...
T Consensus 87 ~D~vilavk~~-------~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 87 ADLVLFCVKST-------DTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp CSEEEECCCGG-------GHHHHHHHHTTTSCTTCEEEEEC
T ss_pred CCEEEEEcccc-------cHHHHHHHHHHhcCCCCEEEEeC
Confidence 99999854322 25788999999998876655443
No 389
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.41 E-value=0.16 Score=45.81 Aligned_cols=42 Identities=26% Similarity=0.467 Sum_probs=32.1
Q ss_pred CCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHH
Q 035593 77 PPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVARE 119 (269)
Q Consensus 77 ~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~ 119 (269)
++.+|+++|+| .|..+..+++.+ +++|+++|.+++..+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 57899999997 444555555554 5799999999998887754
No 390
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=93.30 E-value=0.28 Score=43.21 Aligned_cols=93 Identities=16% Similarity=0.319 Sum_probs=59.3
Q ss_pred CCCCCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-ccc-----ccccc
Q 035593 74 PILPPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-GNA-----LKASL 146 (269)
Q Consensus 74 ~l~~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~D~-----~~~~~ 146 (269)
.+.+..+||++|+| .|.++..+++..++++|++++.+++-.+.+++ ++.. .++. .+. .+...
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----------~vi~~~~~~~~~v~~~~~ 251 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGAD----------HVVDARRDPVKQVMELTR 251 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCS----------EEEETTSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCC----------EEEeccchHHHHHHHHhC
Confidence 45678999999985 45566677776536799999999999999875 3421 1111 111 11122
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHH--HHHHHHhhccCCcEEEEE
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPN--TWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e--~~~~~~~~L~pgG~l~~~ 189 (269)
...+|+|+ |... ..+ .++.+.+. ++|.++.-
T Consensus 252 g~g~Dvvi-d~~G---------~~~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 252 GRGVNVAM-DFVG---------SQATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp TCCEEEEE-ESSC---------CHHHHHHGGGGEE--EEEEEEEC
T ss_pred CCCCcEEE-ECCC---------CchHHHHHHHhhc--CCCEEEEE
Confidence 34799998 4322 133 56666666 89988764
No 391
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.13 E-value=0.39 Score=39.37 Aligned_cols=94 Identities=17% Similarity=0.073 Sum_probs=61.2
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC--CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCC
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP--EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDG 149 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p--~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~ 149 (269)
...+|+.+|+ |.++..+++... +. |+++|.|++.++.++ . .+.++.+|+.+. ..-..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~-----------~~~~i~gd~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--S-----------GANFVHGDPTRVSDLEKANVRG 71 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--T-----------TCEEEESCTTCHHHHHHTTCTT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--c-----------CCeEEEcCCCCHHHHHhcCcch
Confidence 3568999987 566666666543 45 999999998877655 1 268889998764 22457
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
.|+|++...+. ..........+.+.|+..++..+.++
T Consensus 72 ad~vi~~~~~d-------~~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 72 ARAVIVDLESD-------SETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp CSEEEECCSCH-------HHHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred hcEEEEcCCCc-------HHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 89998743321 01234445566678876777766543
No 392
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=93.09 E-value=0.2 Score=43.49 Aligned_cols=92 Identities=14% Similarity=0.150 Sum_probs=60.2
Q ss_pred CCCCC-cEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE-ccc-cc-c--cc
Q 035593 75 ILPPG-PIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV-GNA-LK-A--SL 146 (269)
Q Consensus 75 l~~~~-~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~-~D~-~~-~--~~ 146 (269)
+.+.. +||++|+ |.|..+..+++.. +++|++++.+++-.+.+++ ++.. .++. .|. .+ . ..
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~-lGa~----------~v~~~~~~~~~~~~~~~ 214 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ-LGAS----------EVISREDVYDGTLKALS 214 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH-HTCS----------EEEEHHHHCSSCCCSSC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-cCCc----------EEEECCCchHHHHHHhh
Confidence 44554 8999996 4667777777754 6789999999888888876 3421 1111 111 11 1 22
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
...+|+|+- ... . +.+..+.+.|+++|.+++-
T Consensus 215 ~~~~d~vid-~~g---------~-~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 215 KQQWQGAVD-PVG---------G-KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCCEEEEEE-SCC---------T-HHHHHHHTTEEEEEEEEEC
T ss_pred cCCccEEEE-CCc---------H-HHHHHHHHhhcCCCEEEEE
Confidence 347999873 321 1 4678889999999998764
No 393
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.04 E-value=0.7 Score=40.95 Aligned_cols=94 Identities=11% Similarity=0.111 Sum_probs=59.3
Q ss_pred CCCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 77 PPGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
...+|..||+| +..++..|++ .+.+|+++|.+++.++.+.+. + +. ...+..+. ...+..|+|
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~--~G~~V~v~dr~~~~~~~l~~~-g-----------~~-~~~s~~e~~~~a~~~DvV 85 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK--GGHECVVYDLNVNAVQALERE-G-----------IA-GARSIEEFCAKLVKPRVV 85 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHTT-T-----------CB-CCSSHHHHHHHSCSSCEE
T ss_pred cCCEEEEECchHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHC-C-----------CE-EeCCHHHHHhcCCCCCEE
Confidence 45689999998 3445555555 367999999999887765543 1 11 01233333 233457999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++.+... ...+.++.+...|++|- ++++..+.
T Consensus 86 i~~vp~~-------~v~~vl~~l~~~l~~g~-iiId~st~ 117 (358)
T 4e21_A 86 WLMVPAA-------VVDSMLQRMTPLLAAND-IVIDGGNS 117 (358)
T ss_dssp EECSCGG-------GHHHHHHHHGGGCCTTC-EEEECSSC
T ss_pred EEeCCHH-------HHHHHHHHHHhhCCCCC-EEEeCCCC
Confidence 9855432 35788888988888855 45566544
No 394
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.02 E-value=0.39 Score=41.86 Aligned_cols=105 Identities=14% Similarity=0.058 Sum_probs=62.9
Q ss_pred CCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCc--c---ccccCCC--------CcEEEEEcccc
Q 035593 78 PGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFAL--E---KLEKSYP--------DRLFVYVGNAL 142 (269)
Q Consensus 78 ~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~--~---~~~~~~~--------~rv~~~~~D~~ 142 (269)
.++|..||+| ++.++..+++ .+.+|+++|++++.++.+++.... . ..+.... .++++. .|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 3589999998 4555666665 477999999999999888654210 0 0000000 123332 2221
Q ss_pred ccccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 143 KASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 143 ~~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
..-...|+|+...+... -...++|+.+...++|+-+++.|..+
T Consensus 83 --eav~~aDlVieavpe~~-----~~k~~v~~~l~~~~~~~~Ii~s~tS~ 125 (319)
T 2dpo_A 83 --EAVEGVVHIQECVPENL-----DLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp --HHTTTEEEEEECCCSCH-----HHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred --HHHhcCCEEEEeccCCH-----HHHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 12356899998654220 11357889999999998877766543
No 395
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.99 E-value=0.019 Score=63.22 Aligned_cols=100 Identities=10% Similarity=0.023 Sum_probs=0.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCC-----CceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCC
Q 035593 77 PPGPIGILGFGAGSAARLILDLYP-----EAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDG 149 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p-----~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~ 149 (269)
|..+||+||.|+|..+..+++... -.+.+..|+++...+.|++.|..-. ++.-.-|..+. .....
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d--------i~~~~~d~~~~~~~~~~~ 1311 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH--------VTQGQWDPANPAPGSLGK 1311 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT--------EEEECCCSSCCCC-----
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc--------cccccccccccccCCCCc
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
||+|+..-.-+.... ..+.++.+++.|+|||.+++
T Consensus 1312 ydlvia~~vl~~t~~----~~~~l~~~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1312 ADLLVCNCALATLGD----PAVAVGNMAATLKEGGFLLL 1346 (2512)
T ss_dssp CCEEEEECC------------------------CCEEEE
T ss_pred eeEEEEccccccccc----HHHHHHHHHHhcCCCcEEEE
No 396
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.96 E-value=0.36 Score=41.75 Aligned_cols=92 Identities=12% Similarity=0.087 Sum_probs=59.5
Q ss_pred CCCCCCcEEEEc-C-cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc-c-ccCCC
Q 035593 74 PILPPGPIGILG-F-GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK-A-SLKDG 149 (269)
Q Consensus 74 ~l~~~~~VL~iG-~-G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~-~-~~~~~ 149 (269)
.+.+..+||++| + |.|.++..+++.. +++|+++.. ++-.+.+++. +.. .++..+-.+ + ..-..
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~-~~~~~~~~~l-Ga~----------~~i~~~~~~~~~~~~~g 215 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTAS-KRNHAFLKAL-GAE----------QCINYHEEDFLLAISTP 215 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEEC-HHHHHHHHHH-TCS----------EEEETTTSCHHHHCCSC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEec-cchHHHHHHc-CCC----------EEEeCCCcchhhhhccC
Confidence 456789999997 3 4678888888864 678998875 4447777763 321 122222222 2 22257
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+|+|+ |+.. .+.+..+.+.|+++|.++.-
T Consensus 216 ~D~v~-d~~g----------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 216 VDAVI-DLVG----------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEE-ESSC----------HHHHHHHGGGEEEEEEEEEC
T ss_pred CCEEE-ECCC----------cHHHHHHHHhccCCCEEEEe
Confidence 99998 3322 23348899999999998863
No 397
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.95 E-value=0.25 Score=42.80 Aligned_cols=95 Identities=18% Similarity=0.145 Sum_probs=59.3
Q ss_pred CCCCC-cEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCC
Q 035593 75 ILPPG-PIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDG 149 (269)
Q Consensus 75 l~~~~-~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~ 149 (269)
+.+.. +||++|+ |.|..+..+++.. +++|++++.+++-.+.+++ ++... -+.....|.... .....
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~-lGa~~-------~i~~~~~~~~~~~~~~~~~ 216 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV-LGAKE-------VLAREDVMAERIRPLDKQR 216 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH-TTCSE-------EEECC---------CCSCC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-cCCcE-------EEecCCcHHHHHHHhcCCc
Confidence 44554 8999996 5677777888764 6789999999888888876 44211 011000110111 22347
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
+|+|+- .... +.++.+.+.|+++|.+++-
T Consensus 217 ~d~vid-~~g~----------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 217 WAAAVD-PVGG----------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEEEE-CSTT----------TTHHHHHHTEEEEEEEEEC
T ss_pred ccEEEE-CCcH----------HHHHHHHHhhccCCEEEEE
Confidence 999874 3221 2467788899999998764
No 398
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.91 E-value=0.06 Score=45.50 Aligned_cols=58 Identities=12% Similarity=-0.056 Sum_probs=40.7
Q ss_pred cEEEEEcccccc---ccCCCeeEEEEcCCCCCCCC--CCC--------CcHHHHHHHHhhccCCcEEEEEe
Q 035593 133 RLFVYVGNALKA---SLKDGFSGILVDLFSKGSLL--SEL--------EDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 133 rv~~~~~D~~~~---~~~~~yD~I~~d~~~~~~~~--~~l--------~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
..+++++|+.++ ...+++|+|++|.+-..... ..+ ...++++.+++.|+|+|.++++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 356889999876 34568999999965322100 011 23567888899999999999886
No 399
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.87 E-value=1.8 Score=39.92 Aligned_cols=124 Identities=8% Similarity=-0.038 Sum_probs=77.8
Q ss_pred CCcEEEEcCcccHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc-----------
Q 035593 78 PGPIGILGFGAGSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS----------- 145 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~----------- 145 (269)
.-+++|+=||.|.+...+.+ .+. .|.++|+|+..++.-+.+|+. .+...++.+|..++.
T Consensus 88 ~~~viDLFaG~GGlslG~~~--aG~~~v~avE~d~~A~~ty~~N~~~-------~p~~~~~~~DI~~i~~~~~~~~~~~~ 158 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFES--IGGQCVFTSEWNKHAVRTYKANHYC-------DPATHHFNEDIRDITLSHQEGVSDEA 158 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHT--TTEEEEEEECCCHHHHHHHHHHSCC-------CTTTCEEESCTHHHHCTTCTTSCHHH
T ss_pred cceEEEecCCccHHHHHHHH--CCCEEEEEEeCCHHHHHHHHHhccc-------CCCcceeccchhhhhhccccccchhh
Confidence 35799999999999999876 344 589999999999998888752 234567789988762
Q ss_pred -------cCCCeeEEEEcCCCCCCC-CC-----------CC-------CcHHHHHHHHhhccCCcEEEEEecCCCccccc
Q 035593 146 -------LKDGFSGILVDLFSKGSL-LS-----------EL-------EDPNTWEKLRQCLRKGGRIMVNVGGSCVEAED 199 (269)
Q Consensus 146 -------~~~~yD~I~~d~~~~~~~-~~-----------~l-------~~~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~ 199 (269)
....+|+|+...+-.... .. .+ .-.++++ +.+.++|.=+++=|+.+-...
T Consensus 159 ~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~r-iI~~~rPk~fvlENV~gl~s~--- 234 (482)
T 3me5_A 159 AAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVR-IIDARRPAMFVLENVKNLKSH--- 234 (482)
T ss_dssp HHHHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHH-HHHHHCCSEEEEEEETTTTTG---
T ss_pred HHhhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHH-HHHHcCCcEEEEeCcHHHhcc---
Confidence 124689998664322111 00 00 0123333 334568877777788654210
Q ss_pred cccchhHHHHHHHHHHHH
Q 035593 200 SRRDGKVVMEATLKAMHK 217 (269)
Q Consensus 200 ~~~~~~~~~~~~~~~l~~ 217 (269)
+....+..+++.|.+
T Consensus 235 ---~~g~~f~~i~~~L~~ 249 (482)
T 3me5_A 235 ---DKGKTFRIIMQTLDE 249 (482)
T ss_dssp ---GGGHHHHHHHHHHHH
T ss_pred ---cCCcHHHHHHHHHhc
Confidence 112345666666654
No 400
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=92.85 E-value=0.2 Score=42.37 Aligned_cols=81 Identities=9% Similarity=0.137 Sum_probs=52.1
Q ss_pred CCCeeEEEEcCCCCCCCCCCCC-c-------HHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH
Q 035593 147 KDGFSGILVDLFSKGSLLSELE-D-------PNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV 218 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~-~-------~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (269)
-++||+||+++-.+- ...|.. . .-.=..+.++|+|||.+++-.++.. +.....++..+.+.
T Consensus 209 ~grYDlVfvNv~Tpy-R~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyA----------DR~SE~vV~alARk 277 (324)
T 3trk_A 209 LGRYDLVVINIHTPF-RIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYA----------DRTSERVICVLGRK 277 (324)
T ss_dssp GCCEEEEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCC----------SHHHHHHHHHHHTT
T ss_pred CCceeEEEEecCCcc-ccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccc----------ccchHHHHHHHHhh
Confidence 379999999976542 111110 1 1233456789999999999888752 45677899999999
Q ss_pred hcCceEEEEc--CCCCceEEEEe
Q 035593 219 FGKKLYVLSL--GNRKDDSLIAL 239 (269)
Q Consensus 219 F~~~v~~~~~--~~~~n~v~~~~ 239 (269)
|. .+.+... -.+..++++.+
T Consensus 278 F~-~~rv~~P~cv~snTEv~~vF 299 (324)
T 3trk_A 278 FR-SSRALKPPCVTSNTEMFFLF 299 (324)
T ss_dssp EE-EEEEECCTTCCBTTCEEEEE
T ss_pred he-eeeeecCccccccceEEEEE
Confidence 95 5666542 22333455544
No 401
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.83 E-value=0.65 Score=39.50 Aligned_cols=97 Identities=10% Similarity=0.031 Sum_probs=54.9
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc---ccccc-ccCCCeeE
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG---NALKA-SLKDGFSG 152 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~---D~~~~-~~~~~yD~ 152 (269)
.+|+.||+| ++.++..|.+ .+.+|++++.+++.++..++. +..... .+......- +..+. ..-..+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~~~~~~~~~~~-g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ--GGNDVTLIDQWPAHIEAIRKN-GLIADF---NGEEVVANLPIFSPEEIDHQNEQVDL 77 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHH-CEEEEE---TTEEEEECCCEECGGGCCTTSCCCSE
T ss_pred CeEEEECcCHHHHHHHHHHHh--CCCcEEEEECCHHHHHHHHhC-CEEEEe---CCCeeEecceeecchhhcccCCCCCE
Confidence 379999998 3344455554 356999999999887776654 221100 000000000 11111 11137899
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
|++..... ...+.++.+...|+++.+++.
T Consensus 78 vi~~v~~~-------~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 78 IIALTKAQ-------QLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp EEECSCHH-------HHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEEeccc-------cHHHHHHHHHHhcCCCCEEEE
Confidence 99854322 146788888888888665544
No 402
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.82 E-value=0.034 Score=48.74 Aligned_cols=60 Identities=8% Similarity=-0.047 Sum_probs=47.5
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
+...|||--||+|+.+.++.+ -+.+..++|++|..+++|++++.... .....+..|+++.
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~--~gr~~ig~e~~~~~~~~~~~r~~~~~------~~~~~~~~~~~~i 311 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAER--ESRKWISFEMKPEYVAASAFRFLDNN------ISEEKITDIYNRI 311 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHH--TTCEEEEEESCHHHHHHHHGGGSCSC------SCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHH--cCCCEEEEeCCHHHHHHHHHHHHhcc------cchHHHHHHHHHH
Confidence 567899999999999999887 37899999999999999999985321 2345555666554
No 403
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.73 E-value=0.077 Score=46.43 Aligned_cols=62 Identities=19% Similarity=0.103 Sum_probs=43.4
Q ss_pred CCcEEEE-Ecccccc---ccCCCeeEEEEcCCCCCCC-----CCCC--CcHHHHHHHHhhccCCcEEEEEecC
Q 035593 131 PDRLFVY-VGNALKA---SLKDGFSGILVDLFSKGSL-----LSEL--EDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 131 ~~rv~~~-~~D~~~~---~~~~~yD~I~~d~~~~~~~-----~~~l--~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+...+++ ++|+.++ ...+++|+|++|.+-.... .... ...+.+..+++.|+|+|.+++++..
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 3457888 9999886 3456899999996432210 0000 2357788889999999999998754
No 404
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.72 E-value=0.16 Score=46.69 Aligned_cols=64 Identities=17% Similarity=0.131 Sum_probs=47.5
Q ss_pred CcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCee
Q 035593 79 GPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGFS 151 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~yD 151 (269)
.+|+.+||| ..+..+++.. .+..|+++|.|++.++.+.+.++ +.+++||+.+. ..-+..|
T Consensus 4 M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~-----------~~~i~Gd~~~~~~L~~Agi~~ad 70 (461)
T 4g65_A 4 MKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD-----------LRVVNGHASHPDVLHEAGAQDAD 70 (461)
T ss_dssp EEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS-----------CEEEESCTTCHHHHHHHTTTTCS
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC-----------cEEEEEcCCCHHHHHhcCCCcCC
Confidence 468887775 5555666554 36689999999999988777653 67889999875 2346788
Q ss_pred EEEE
Q 035593 152 GILV 155 (269)
Q Consensus 152 ~I~~ 155 (269)
+++.
T Consensus 71 ~~ia 74 (461)
T 4g65_A 71 MLVA 74 (461)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 405
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.69 E-value=0.89 Score=40.13 Aligned_cols=93 Identities=16% Similarity=0.122 Sum_probs=58.6
Q ss_pred CCCCCcEEEEc--CcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCC
Q 035593 75 ILPPGPIGILG--FGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKD 148 (269)
Q Consensus 75 l~~~~~VL~iG--~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~ 148 (269)
+.+..+||++| +|.|..+..+++.. +++|++++ +++-.+.+++ ++.. .++..+-.++ ....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~-lGa~----------~v~~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRK-LGAD----------DVIDYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHH-TTCS----------EEEETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHH-cCCC----------EEEECCchHHHHHHhhcC
Confidence 56788999999 34677777888764 67999998 6777777754 3321 1111111111 2235
Q ss_pred CeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 149 GFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.+|+|+-. ... ....++.+.+.|+++|.++.-
T Consensus 248 g~D~vid~-~g~--------~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 248 PFDFILDN-VGG--------STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CBSEEEES-SCT--------THHHHGGGGBCSSSCCEEEES
T ss_pred CCCEEEEC-CCC--------hhhhhHHHHHhhcCCcEEEEe
Confidence 79999843 221 113457777889999998763
No 406
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.66 E-value=0.38 Score=40.52 Aligned_cols=88 Identities=23% Similarity=0.104 Sum_probs=55.3
Q ss_pred cEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEcC
Q 035593 80 PIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVDL 157 (269)
Q Consensus 80 ~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d~ 157 (269)
+|..||+| ++.++..+.+ .+.+|+++|.+++.++.+++. +.. . + ...|..+ . ...|+|++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~~~~~~~~~~-g~~-------~--~-~~~~~~~--~-~~~D~vi~av 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR--RGHYLIGVSRQQSTCEKAVER-QLV-------D--E-AGQDLSL--L-QTAKIIFLCT 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHT-TSC-------S--E-EESCGGG--G-TTCSEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHhC-CCC-------c--c-ccCCHHH--h-CCCCEEEEEC
Confidence 68999987 3344555554 356899999999888776542 221 1 1 1223222 2 5789999854
Q ss_pred CCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 158 FSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 158 ~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
... ...+.++.+...++++.+ ++++.
T Consensus 66 ~~~-------~~~~~~~~l~~~~~~~~~-vv~~~ 91 (279)
T 2f1k_A 66 PIQ-------LILPTLEKLIPHLSPTAI-VTDVA 91 (279)
T ss_dssp CHH-------HHHHHHHHHGGGSCTTCE-EEECC
T ss_pred CHH-------HHHHHHHHHHhhCCCCCE-EEECC
Confidence 321 246788888888887664 46663
No 407
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.60 E-value=0.38 Score=42.41 Aligned_cols=89 Identities=12% Similarity=0.053 Sum_probs=57.3
Q ss_pred CCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECCh---HHHHHHHHhcCccccccCCCCcEEEEEcc-cccc--ccCCCe
Q 035593 78 PGPIGILGFGA-GSAARLILDLYPEAVIHGWELDP---SVIKVAREFFALEKLEKSYPDRLFVYVGN-ALKA--SLKDGF 150 (269)
Q Consensus 78 ~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp---~~~~~a~~~~~~~~~~~~~~~rv~~~~~D-~~~~--~~~~~y 150 (269)
.++||++|+|+ |..+..+++.. +++|++++.++ +-.+.+++. +.. .+ ..+ ..+. .....+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~-ga~--------~v---~~~~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEET-KTN--------YY---NSSNGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHH-TCE--------EE---ECTTCSHHHHHHHCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHh-CCc--------ee---chHHHHHHHHHhCCCC
Confidence 78999999842 55555666543 66999999998 777887753 321 12 112 1111 112579
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHH-HHHHhhccCCcEEEEE
Q 035593 151 SGILVDLFSKGSLLSELEDPNTW-EKLRQCLRKGGRIMVN 189 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~-~~~~~~L~pgG~l~~~ 189 (269)
|+|+-.... ...+ +.+.+.|+++|.++.-
T Consensus 248 d~vid~~g~----------~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 248 DVIIDATGA----------DVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEEECCCC----------CTHHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCCC----------hHHHHHHHHHHHhcCCEEEEE
Confidence 999853321 1356 8889999999988764
No 408
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.54 E-value=0.48 Score=43.22 Aligned_cols=103 Identities=16% Similarity=0.085 Sum_probs=64.0
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEE----ccc------
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYV----GNA------ 141 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~----~D~------ 141 (269)
.+.+..+||++|+ |.|.++..+++.. ++++++++.+++-.+.+++. +........+..+.+.. .|.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~l-Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAM-GAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhh-CCcEEEecCcCcccccccccccchHHHHHH
Confidence 4567889999997 4577777888764 77999999999999998764 32110000000000000 000
Q ss_pred -ccc---ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 142 -LKA---SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 142 -~~~---~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
... .....+|+|+- .. ..+.++.+.+.|+++|.+++-
T Consensus 303 ~~~i~~~t~g~g~Dvvid-~~----------G~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFE-HP----------GRETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHTSCCEEEEEE-CS----------CHHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHhCCCCCcEEEE-cC----------CchhHHHHHHHhhCCcEEEEE
Confidence 111 23468999973 22 136788899999999998863
No 409
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.45 E-value=1.3 Score=36.78 Aligned_cols=75 Identities=13% Similarity=0.041 Sum_probs=48.3
Q ss_pred CCCcEEEEcCccc-HH----HHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccc------
Q 035593 77 PPGPIGILGFGAG-SA----ARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKAS------ 145 (269)
Q Consensus 77 ~~~~VL~iG~G~G-~~----~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~------ 145 (269)
..++||+.|++++ .+ ++.|++ .+.+|.+++.++...+.+++...... ..++.++..|..+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE--AGARLIFTYAGERLEKSVHELAGTLD-----RNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHHTSS-----SCCCEEEECCCSSSHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH--CCCEEEEecCchHHHHHHHHHHHhcC-----CCCceEEeCCCCCHHHHHHHH
Confidence 4678999997633 23 344444 47899999998765555544332111 247899999998751
Q ss_pred -----cCCCeeEEEEcCC
Q 035593 146 -----LKDGFSGILVDLF 158 (269)
Q Consensus 146 -----~~~~yD~I~~d~~ 158 (269)
..++.|+++..+.
T Consensus 79 ~~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHhCCeeEEEEccc
Confidence 1247899998753
No 410
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.45 E-value=0.49 Score=39.92 Aligned_cols=93 Identities=19% Similarity=0.225 Sum_probs=55.8
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCC-CeeEEEE
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKD-GFSGILV 155 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~-~yD~I~~ 155 (269)
.+|..||+| ++.++..+.+.....+|+++|.+++.++.+++. +.. . . ...|..+. -. ..|+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~-------~--~-~~~~~~~~--~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GII-------D--E-GTTSIAKV--EDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSC-------S--E-EESCGGGG--GGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-CCc-------c--c-ccCCHHHH--hcCCCCEEEE
Confidence 379999988 344555555421123899999999988877643 211 1 1 11232221 23 6899998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
..... ...+.++.+...|+++.+ ++++.+
T Consensus 69 avp~~-------~~~~v~~~l~~~l~~~~i-v~~~~~ 97 (281)
T 2g5c_A 69 SSPVR-------TFREIAKKLSYILSEDAT-VTDQGS 97 (281)
T ss_dssp CSCHH-------HHHHHHHHHHHHSCTTCE-EEECCS
T ss_pred cCCHH-------HHHHHHHHHHhhCCCCcE-EEECCC
Confidence 54322 145788888888988764 455543
No 411
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=92.39 E-value=3.7 Score=33.15 Aligned_cols=70 Identities=13% Similarity=0.023 Sum_probs=47.4
Q ss_pred CcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--------ccCC
Q 035593 79 GPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--------SLKD 148 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--------~~~~ 148 (269)
++||+.|+++| +++.+++++ .+.+|.+++.+++-++...+.++ .++.++..|..+. ...+
T Consensus 2 k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 2 SLIVITGASSG-LGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS---------NNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp -CEEEESTTSH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS---------SCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred CEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---------hccCeEeecCCCHHHHHHHHHHHhh
Confidence 46888887654 444444332 47899999999988877666542 3578888888764 2345
Q ss_pred CeeEEEEcCC
Q 035593 149 GFSGILVDLF 158 (269)
Q Consensus 149 ~yD~I~~d~~ 158 (269)
.+|+++..+.
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 5699987654
No 412
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=92.27 E-value=0.33 Score=42.50 Aligned_cols=93 Identities=11% Similarity=0.083 Sum_probs=55.1
Q ss_pred CCCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc------
Q 035593 73 PPILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA------ 144 (269)
Q Consensus 73 ~~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~------ 144 (269)
..+.+..+||++|+ |.|.++..+++...+.+|+++. +++-.+.++ ++.. .++. +..++
T Consensus 138 ~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~----------~~~~-~~~~~~~~~~~ 203 (349)
T 4a27_A 138 ANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVT----------HLFD-RNADYVQEVKR 203 (349)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSS----------EEEE-TTSCHHHHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCc----------EEEc-CCccHHHHHHH
Confidence 34567899999998 3567777777755567899888 555555554 4321 1222 11122
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
...+.+|+|+- +... +.++.+.+.|+++|.+++--
T Consensus 204 ~~~~g~Dvv~d-~~g~----------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 204 ISAEGVDIVLD-CLCG----------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp HCTTCEEEEEE-ECC-----------------CTTEEEEEEEEEEC
T ss_pred hcCCCceEEEE-CCCc----------hhHHHHHHHhhcCCEEEEEC
Confidence 23468999984 3221 12366778999999998643
No 413
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=92.22 E-value=0.93 Score=39.75 Aligned_cols=112 Identities=9% Similarity=0.068 Sum_probs=67.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccc-----cc-----------cCCCCcEEEEEcc
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEK-----LE-----------KSYPDRLFVYVGN 140 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~-----~~-----------~~~~~rv~~~~~D 140 (269)
+...|+.||||..+.+..+....++.++.=||. |++++.-++.+.-.+ ++ ....++.+++-.|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 567899999999999999887656555555555 999888766643110 00 0013689999999
Q ss_pred cccc-c---------cCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEE-EEecC
Q 035593 141 ALKA-S---------LKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIM-VNVGG 192 (269)
Q Consensus 141 ~~~~-~---------~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~-~~~~~ 192 (269)
.++. . ......++++...-. +.+.-....+++.+.+.+ |+|.++ +....
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~--YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLC--YMHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGG--GSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhh--CCCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 9873 1 123455665532111 111111246777777776 667654 54443
No 414
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=92.18 E-value=0.39 Score=41.63 Aligned_cols=119 Identities=16% Similarity=0.067 Sum_probs=76.2
Q ss_pred cEEEEcCcccHHHHHHHHHCCCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEEc
Q 035593 80 PIGILGFGAGSAARLILDLYPEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILVD 156 (269)
Q Consensus 80 ~VL~iG~G~G~~~~~l~~~~p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~d 156 (269)
+|+|+=||.|.+..-+.+. +. .+.++|+|+..++.-+.+++ -+++.+|..++ ..-...|+|+..
T Consensus 2 kvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~~-----------~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNHS-----------AKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHCC-----------SEEEESCGGGCCGGGSCCCSEEECC
T ss_pred eEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHCC-----------CCcccCChhhCCHhhCCcccEEEec
Confidence 6899999999999988773 44 56799999999999888864 25678999988 334578999854
Q ss_pred CCCCC----CCCCCCCc------HHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHHH
Q 035593 157 LFSKG----SLLSELED------PNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHKV 218 (269)
Q Consensus 157 ~~~~~----~~~~~l~~------~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (269)
.+-.. +....+.. .++++ +.+.++|.-+++=|+.+-.. . .....+..+++.|.+.
T Consensus 69 pPCQ~fS~ag~~~g~~d~R~~L~~~~~r-~i~~~~Pk~~~~ENV~gl~~-----~-~~~~~~~~i~~~l~~~ 133 (331)
T 3ubt_Y 69 PPSQSWSEGGSLRGIDDPRGKLFYEYIR-ILKQKKPIFFLAENVKGMMA-----Q-RHNKAVQEFIQEFDNA 133 (331)
T ss_dssp CCGGGTEETTEECCTTCGGGHHHHHHHH-HHHHHCCSEEEEEECCGGGG-----C-TTSHHHHHHHHHHHHH
T ss_pred CCCCCcCCCCCccCCCCchhHHHHHHHH-HHhccCCeEEEeeeeccccc-----c-cccchhhhhhhhhccC
Confidence 32111 10001111 23333 44567898777768754321 0 1133566777777664
No 415
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.15 E-value=0.67 Score=40.38 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=55.9
Q ss_pred CcEEEEcCcc--cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCC--CcEEEEEccccccccCCCeeEEE
Q 035593 79 GPIGILGFGA--GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYP--DRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 79 ~~VL~iG~G~--G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~--~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
.+|+.||+|. +.++..|.+ .+.+|++++.+++.++..++..+..-.+.... .++.....|..+ .-..+|+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~D~vi 80 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL--KGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL--AVKDADVIL 80 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH--HHTTCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHH--HHhcCCEEE
Confidence 5899999984 234444444 36789999999988877666532210000000 000011122211 124789999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEE
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIM 187 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~ 187 (269)
+...... ..+.++.+...|+++.+++
T Consensus 81 ~~v~~~~-------~~~~~~~l~~~l~~~~~vv 106 (359)
T 1bg6_A 81 IVVPAIH-------HASIAANIASYISEGQLII 106 (359)
T ss_dssp ECSCGGG-------HHHHHHHHGGGCCTTCEEE
T ss_pred EeCCchH-------HHHHHHHHHHhCCCCCEEE
Confidence 8654321 3688888988898866443
No 416
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.12 E-value=0.37 Score=41.62 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=53.6
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccc-cccCCCeeEEEE
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALK-ASLKDGFSGILV 155 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~-~~~~~~yD~I~~ 155 (269)
.+|+.||+| ++.++..|.+ .+.+|+.++.++ . +..++. ++.-.. .....++..-.+.. ......+|+|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~-~-~~i~~~-g~~~~~--~~g~~~~~~~~~~~~~~~~~~~D~vil 75 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR--SGEDVHFLLRRD-Y-EAIAGN-GLKVFS--INGDFTLPHVKGYRAPEEIGPMDLVLV 75 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH--TSCCEEEECSTT-H-HHHHHT-CEEEEE--TTCCEEESCCCEESCHHHHCCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCc-H-HHHHhC-CCEEEc--CCCeEEEeeceeecCHHHcCCCCEEEE
Confidence 479999998 3445555555 356899999987 3 444432 221000 01222221000000 112357999998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
..... ...+.++.++..|+++..++.
T Consensus 76 avk~~-------~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 76 GLKTF-------ANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp CCCGG-------GGGGHHHHHGGGCCTTCEEEE
T ss_pred ecCCC-------CcHHHHHHHHhhcCCCCEEEE
Confidence 54322 246889999999998876554
No 417
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.81 E-value=0.53 Score=39.88 Aligned_cols=93 Identities=19% Similarity=0.108 Sum_probs=57.5
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
.+|..||+| ++.++..+.+..++.+|+++|.+++.++.+++. +.. . ....|..+. -...|+|++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~-------~---~~~~~~~~~--~~~aDvVila 73 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GIV-------D---EATADFKVF--AALADVIILA 73 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TSC-------S---EEESCTTTT--GGGCSEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CCc-------c---cccCCHHHh--hcCCCEEEEc
Confidence 579999998 455566666643467899999999888776552 211 0 111222221 2468999985
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhh-ccCCcEEEEEecC
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQC-LRKGGRIMVNVGG 192 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~-L~pgG~l~~~~~~ 192 (269)
.... . ..+.++.+... |+++.+ ++++.+
T Consensus 74 vp~~------~-~~~v~~~l~~~~l~~~~i-vi~~~~ 102 (290)
T 3b1f_A 74 VPIK------K-TIDFIKILADLDLKEDVI-ITDAGS 102 (290)
T ss_dssp SCHH------H-HHHHHHHHHTSCCCTTCE-EECCCS
T ss_pred CCHH------H-HHHHHHHHHhcCCCCCCE-EEECCC
Confidence 4322 1 26788888877 887654 445533
No 418
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.75 E-value=0.41 Score=44.25 Aligned_cols=105 Identities=9% Similarity=0.042 Sum_probs=65.5
Q ss_pred CCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCc--c---ccccCC-------CCcEEEEEccccc
Q 035593 78 PGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFAL--E---KLEKSY-------PDRLFVYVGNALK 143 (269)
Q Consensus 78 ~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~--~---~~~~~~-------~~rv~~~~~D~~~ 143 (269)
.++|..||+| ++.++..+++ .+.+|+++|++++.++.+++.... . ..+... ..+++.. .|..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~--aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~- 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAAS--HGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIH- 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHH--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHH-
Confidence 3589999998 3455666665 477999999999999888764210 0 000000 0134432 2322
Q ss_pred cccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 144 ASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 144 ~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
.-...|+||...+... -...++|+++.+.++|+.+++.|..+.
T Consensus 81 --~~~~aDlVIeAVpe~~-----~vk~~v~~~l~~~~~~~~IlasntSti 123 (483)
T 3mog_A 81 --ALAAADLVIEAASERL-----EVKKALFAQLAEVCPPQTLLTTNTSSI 123 (483)
T ss_dssp --GGGGCSEEEECCCCCH-----HHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred --HhcCCCEEEEcCCCcH-----HHHHHHHHHHHHhhccCcEEEecCCCC
Confidence 2346799997554321 012578999999999998888887554
No 419
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.75 E-value=0.19 Score=42.80 Aligned_cols=104 Identities=9% Similarity=0.040 Sum_probs=61.0
Q ss_pred CcEEEEcCcc--cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC------------cccccc-CCCCcEEEEEccccc
Q 035593 79 GPIGILGFGA--GSAARLILDLYPEAVIHGWELDPSVIKVAREFFA------------LEKLEK-SYPDRLFVYVGNALK 143 (269)
Q Consensus 79 ~~VL~iG~G~--G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~------------~~~~~~-~~~~rv~~~~~D~~~ 143 (269)
++|..||+|. ..++..+++ .+.+|+++|++++.++.+++... +..... ....+++. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF--HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 5899999883 344444444 47799999999999888776521 100000 00012222 122211
Q ss_pred cccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 144 ASLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 144 ~~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.-...|+|+....... -...++++.+...++|+.+++-|..+
T Consensus 82 --~~~~aDlVi~av~~~~-----~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 82 --AVKDADLVIEAVPESL-----DLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp --HTTTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred --HhccCCEEEEeccCcH-----HHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 2356899997543220 01357888999999998877666543
No 420
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.67 E-value=0.37 Score=43.77 Aligned_cols=96 Identities=11% Similarity=-0.016 Sum_probs=62.8
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccc----------
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNA---------- 141 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~---------- 141 (269)
.+.+.++||++|+ |.|..+..+++. .++++++++.+++-.+.+++. +.. .-+.....|.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~-~Ga~vi~~~~~~~~~~~~~~l-Ga~-------~~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKN-GGGIPVAVVSSAQKEAAVRAL-GCD-------LVINRAELGITDDIADDPRR 287 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHT-TCC-------CEEEHHHHTCCTTGGGCHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHhc-CCC-------EEEecccccccccccccccc
Confidence 4567899999996 356777777775 478999999999999998763 321 1111101111
Q ss_pred ---------ccc--ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 142 ---------LKA--SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 142 ---------~~~--~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
... .....+|+|+-.. . .+.++.+.+.|+++|.++.-
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~-G----------~~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHT-G----------RVTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECS-C----------HHHHHHHHHHSCTTCEEEES
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECC-C----------chHHHHHHHHHhcCCEEEEE
Confidence 111 1245799998422 1 24678888999999998763
No 421
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.67 E-value=0.91 Score=39.22 Aligned_cols=96 Identities=11% Similarity=0.048 Sum_probs=55.6
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHh-cCccccccCCCCcEEEE----EccccccccCCCee
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREF-FALEKLEKSYPDRLFVY----VGNALKASLKDGFS 151 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~-~~~~~~~~~~~~rv~~~----~~D~~~~~~~~~yD 151 (269)
.+|++||+| ++.++..|.+ .+.+|+.++.++ . +..++. +.... ...+.+++. ..|.. ...+.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~~-~-~~i~~~Gl~~~~---~~~g~~~~~~~~~~~~~~--~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK--TGHCVSVVSRSD-Y-ETVKAKGIRIRS---ATLGDYTFRPAAVVRSAA--ELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH--TTCEEEEECSTT-H-HHHHHHCEEEEE---TTTCCEEECCSCEESCGG--GCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCeEEEEeCCh-H-HHHHhCCcEEee---cCCCcEEEeeeeeECCHH--HcCCCCC
Confidence 479999998 4455555555 367999999987 3 444432 11110 001223321 11211 1224799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+|++...... ..+.++.++..|+++..++.-.
T Consensus 74 lVilavK~~~-------~~~~l~~l~~~l~~~t~Iv~~~ 105 (320)
T 3i83_A 74 CTLLCIKVVE-------GADRVGLLRDAVAPDTGIVLIS 105 (320)
T ss_dssp EEEECCCCCT-------TCCHHHHHTTSCCTTCEEEEEC
T ss_pred EEEEecCCCC-------hHHHHHHHHhhcCCCCEEEEeC
Confidence 9998654332 3468899999999887665433
No 422
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=91.62 E-value=2.1 Score=36.09 Aligned_cols=84 Identities=10% Similarity=0.060 Sum_probs=51.3
Q ss_pred hHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccc
Q 035593 64 TYFDAFATLPPILPPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNA 141 (269)
Q Consensus 64 ~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~ 141 (269)
.|++.|+.+ +.+.+|+.|+++| +++.+++.+ .+.+|.+++.+++-++...+.+... ..++.++..|.
T Consensus 18 ~~~~~m~~~----~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv 86 (283)
T 3v8b_A 18 LYFQSMMNQ----PSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGA------GGQAIALEADV 86 (283)
T ss_dssp -------------CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT------TCCEEEEECCT
T ss_pred hhhhhhcCC----CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccC
Confidence 355555433 4567888887654 444444332 4789999999998877666655321 35789999998
Q ss_pred ccc-----------ccCCCeeEEEEcCC
Q 035593 142 LKA-----------SLKDGFSGILVDLF 158 (269)
Q Consensus 142 ~~~-----------~~~~~yD~I~~d~~ 158 (269)
.+. ..-++.|+++.++-
T Consensus 87 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 87 SDELQMRNAVRDLVLKFGHLDIVVANAG 114 (283)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 864 12357999998764
No 423
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=91.21 E-value=0.27 Score=38.28 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=64.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--c----cCCCe
Q 035593 77 PPGPIGILGFGAGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--S----LKDGF 150 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~----~~~~y 150 (269)
.+.-|||+|.|.|..=.+|.+.+|+.+|.++|-.-.. .+. ...+.-.++.||+++. . -..+.
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~---------hp~---~~P~~e~~ilGdi~~tL~~~~~r~g~~a 107 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS---------HPD---STPPEAQLILGDIRETLPATLERFGATA 107 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC---------CGG---GCCCGGGEEESCHHHHHHHHHHHHCSCE
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc---------CCC---CCCchHheecccHHHHHHHHHHhcCCce
Confidence 3778999999999999999999999999999973110 111 1234567888999876 1 24556
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHH-HHHHhhccCCcEEEEE
Q 035593 151 SGILVDLFSKGSLLSELEDPNTW-EKLRQCLRKGGRIMVN 189 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~-~~~~~~L~pgG~l~~~ 189 (269)
-++-.|.-.+.. .....+..++ ..+...|.|||+++-.
T Consensus 108 ~LaHaD~G~g~~-~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 108 SLVHADLGGHNR-EKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp EEEEECCCCSCH-HHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred EEEEeecCCCCc-chhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 666666544321 0011111222 2456788999988753
No 424
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.11 E-value=3 Score=34.89 Aligned_cols=121 Identities=16% Similarity=0.047 Sum_probs=64.4
Q ss_pred ccchHHHHHhcCCCCCCCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECCh-HHHHHHHHhcCccccccCCCCcEEEE
Q 035593 61 LTNTYFDAFATLPPILPPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDP-SVIKVAREFFALEKLEKSYPDRLFVY 137 (269)
Q Consensus 61 l~~~y~~~~~~~~~l~~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp-~~~~~a~~~~~~~~~~~~~~~rv~~~ 137 (269)
....|.+.|+.... ...+.+|+.|+++| +++.+++++ .+.+|..++.+. +-.+...+.+.. ...++.++
T Consensus 15 ~~~~~~~~mm~~~~-l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~------~~~~~~~~ 86 (271)
T 3v2g_A 15 TENLYFQSMMTSIS-LAGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ------AGGRAVAI 86 (271)
T ss_dssp -----CHHHHTTTC-CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH------TTCCEEEE
T ss_pred ccccchhhhccccC-CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh------cCCcEEEE
Confidence 34446666654322 25678899987654 444443332 478898886653 434433333221 13578999
Q ss_pred Ecccccc-----------ccCCCeeEEEEcCCCCCCCCC-CCCc--------------HHHHHHHHhhccCCcEEEEE
Q 035593 138 VGNALKA-----------SLKDGFSGILVDLFSKGSLLS-ELED--------------PNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 138 ~~D~~~~-----------~~~~~yD~I~~d~~~~~~~~~-~l~~--------------~e~~~~~~~~L~pgG~l~~~ 189 (269)
..|..+. ..-++.|+++.++-.....+. .... ....+.+...|+++|.++..
T Consensus 87 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 87 RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9998864 122478999987532211111 1111 12345556777788876554
No 425
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.99 E-value=0.31 Score=40.46 Aligned_cols=91 Identities=12% Similarity=0.178 Sum_probs=53.7
Q ss_pred CcEEEEcCc--ccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 79 GPIGILGFG--AGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
.+|..||+| ++.++..+.+.. +..+|+++|.+++-++..++.++. ++ ..|..+. -...|+|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~-----------~~-~~~~~e~--~~~aDvVi 68 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGL-----------TT-TTDNNEV--AKNADILI 68 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCC-----------EE-CSCHHHH--HHHCSEEE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCC-----------EE-eCChHHH--HHhCCEEE
Confidence 479999998 445556666531 123899999999988777655432 11 1222221 23579999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+..... ...+.++.+...|+++.+++...
T Consensus 69 lav~~~-------~~~~v~~~l~~~l~~~~~vvs~~ 97 (247)
T 3gt0_A 69 LSIKPD-------LYASIINEIKEIIKNDAIIVTIA 97 (247)
T ss_dssp ECSCTT-------THHHHC---CCSSCTTCEEEECS
T ss_pred EEeCHH-------HHHHHHHHHHhhcCCCCEEEEec
Confidence 865221 24677788888888876655333
No 426
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.92 E-value=0.65 Score=39.49 Aligned_cols=88 Identities=9% Similarity=0.003 Sum_probs=55.4
Q ss_pred CcEEEEcCc--ccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 79 GPIGILGFG--AGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.+|..||+| ++.++..+.+.. +..+|+++|.+++-++..++.++ +++ ..|..+. -...|+|++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g-----------i~~-~~~~~~~--~~~aDvVil 69 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG-----------VHT-TQDNRQG--ALNADVVVL 69 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC-----------CEE-ESCHHHH--HSSCSEEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC-----------CEE-eCChHHH--HhcCCeEEE
Confidence 579999998 344555555531 22389999999998887776543 222 1222221 245799998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhh-ccCCcEEE
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQC-LRKGGRIM 187 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~-L~pgG~l~ 187 (269)
.... . ...+.++.+... |+++-+++
T Consensus 70 av~p------~-~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 70 AVKP------H-QIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp CSCG------G-GHHHHHHHHHHHHHTTTCEEE
T ss_pred EeCH------H-HHHHHHHHHHhhccCCCeEEE
Confidence 5522 1 246888889888 87654554
No 427
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=90.81 E-value=1.8 Score=36.44 Aligned_cols=75 Identities=8% Similarity=-0.019 Sum_probs=49.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+++++ .+.+|.+++.+++-++...+.+... ..++.++..|..+.
T Consensus 23 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 23 RPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA------GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp --CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4678888887654 444443332 4789999999998777665554211 35799999998864
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 96 ~~~~g~id~lv~nAg 110 (279)
T 3sju_A 96 VERFGPIGILVNSAG 110 (279)
T ss_dssp HHHHCSCCEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 12257899998764
No 428
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=90.70 E-value=1.5 Score=36.23 Aligned_cols=74 Identities=7% Similarity=0.018 Sum_probs=50.4
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+++.+ .+.+|.+++.+++-++...+.+... ..++.++..|..+.
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA------GGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEECcCCCHHHHHHHHHHH
Confidence 3567888887655 444443332 3789999999988776665554211 35799999998764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
.. ++.|+++.++-
T Consensus 79 ~~~-g~id~lv~nAg 92 (252)
T 3h7a_A 79 DAH-APLEVTIFNVG 92 (252)
T ss_dssp HHH-SCEEEEEECCC
T ss_pred Hhh-CCceEEEECCC
Confidence 12 68999998754
No 429
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.65 E-value=0.79 Score=38.84 Aligned_cols=86 Identities=19% Similarity=0.243 Sum_probs=54.3
Q ss_pred CcEEEEcC-c--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 79 GPIGILGF-G--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 79 ~~VL~iG~-G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.+|..||+ | ++.++..|.+ .+.+|++++.+++.++.+++ .+.. + .+.. ..-...|+|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~--~g~~V~~~~r~~~~~~~~~~-~g~~---------~----~~~~--~~~~~aDvVi~ 73 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD--SAHHLAAIEIAPEGRDRLQG-MGIP---------L----TDGD--GWIDEADVVVL 73 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH--SSSEEEEECCSHHHHHHHHH-TTCC---------C----CCSS--GGGGTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHh-cCCC---------c----CCHH--HHhcCCCEEEE
Confidence 48999999 7 3445555555 35799999999988777665 2211 1 1211 22246899998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
..... . ..+.++.+...|+++. +++++
T Consensus 74 av~~~------~-~~~v~~~l~~~l~~~~-ivv~~ 100 (286)
T 3c24_A 74 ALPDN------I-IEKVAEDIVPRVRPGT-IVLIL 100 (286)
T ss_dssp CSCHH------H-HHHHHHHHGGGSCTTC-EEEES
T ss_pred cCCch------H-HHHHHHHHHHhCCCCC-EEEEC
Confidence 54321 1 4677888888887765 44554
No 430
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=90.55 E-value=2.7 Score=34.74 Aligned_cols=72 Identities=13% Similarity=0.104 Sum_probs=49.4
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+++|+.|+++| +++.+.+++ .+.+|.+++.+++-.+...+.++ .++.++..|..+.
T Consensus 7 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~ 76 (259)
T 4e6p_A 7 EGKSALITGSARG-IGRAFAEAYVREGATVAIADIDIERARQAAAEIG---------PAAYAVQMDVTRQDSIDAAIAAT 76 (259)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CCceEEEeeCCCHHHHHHHHHHH
Confidence 4577888886544 444444332 47899999999987766655542 4688899998764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++..+-
T Consensus 77 ~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 77 VEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHSSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 12347999998764
No 431
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.17 E-value=3.1 Score=37.90 Aligned_cols=108 Identities=13% Similarity=0.047 Sum_probs=59.4
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCc---ccccc-C----CCCcEEEEEccccccccCC
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFAL---EKLEK-S----YPDRLFVYVGNALKASLKD 148 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~---~~~~~-~----~~~rv~~~~~D~~~~~~~~ 148 (269)
.+|..||+| +..++..+++ .+.+|+++|++++.++..++.... +.... . ...++++. .|..+ .-.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~--~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~e--a~~ 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE--LGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQ--AVP 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHH--HGG
T ss_pred CEEEEECcCHHHHHHHHHHHh--cCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHH--HHh
Confidence 479999998 3344445554 367999999999988877663210 00000 0 01233322 23221 124
Q ss_pred CeeEEEEcCCCCCCCC--CCC-CcHHHHHHHHhhccCCcEEEEEecC
Q 035593 149 GFSGILVDLFSKGSLL--SEL-EDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 149 ~yD~I~~d~~~~~~~~--~~l-~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
..|+||+....+.... +.+ ...+.++.+...|++| .++++...
T Consensus 78 ~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g-~iVV~~ST 123 (450)
T 3gg2_A 78 EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRY-ILIVTKST 123 (450)
T ss_dssp GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSC-EEEEECSC
T ss_pred cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCC-CEEEEeee
Confidence 5799998765442110 111 2357778888888875 45555543
No 432
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.06 E-value=3.4 Score=37.70 Aligned_cols=103 Identities=15% Similarity=0.185 Sum_probs=62.5
Q ss_pred CCcEEEEcCcc--cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC-----------ccccccCCCCcEEEEEcccccc
Q 035593 78 PGPIGILGFGA--GSAARLILDLYPEAVIHGWELDPSVIKVAREFFA-----------LEKLEKSYPDRLFVYVGNALKA 144 (269)
Q Consensus 78 ~~~VL~iG~G~--G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~-----------~~~~~~~~~~rv~~~~~D~~~~ 144 (269)
..+|.+||+|. +.++..+++ .+.+|+++|++++.++.+++... .... .......++ ..|..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~-~~~~~~~~i-~~~~~-- 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR--VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQ-ASAKPKLRF-SSSTK-- 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCEEE-ESCGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHHhhh-cCCHH--
Confidence 45799999984 344455544 47799999999998887765321 0000 000112233 34432
Q ss_pred ccCCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 145 SLKDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 145 ~~~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.-...|+||...+... -...++++.+...++|+.+++.|..+
T Consensus 111 -~~~~aDlVIeaVpe~~-----~~k~~v~~~l~~~~~~~~ii~snTs~ 152 (463)
T 1zcj_A 111 -ELSTVDLVVEAVFEDM-----NLKKKVFAELSALCKPGAFLCTNTSA 152 (463)
T ss_dssp -GGTTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred -HHCCCCEEEEcCCCCH-----HHHHHHHHHHHhhCCCCeEEEeCCCC
Confidence 2356899998654210 01257888899999998888775543
No 433
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.04 E-value=1.3 Score=32.60 Aligned_cols=92 Identities=12% Similarity=0.147 Sum_probs=51.3
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---c--cCCCe
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---S--LKDGF 150 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---~--~~~~y 150 (269)
.++|+.+|+| .++..+.+.. .+.+|+++|.+++-++.+++. ...++.+|..+. . ..+.+
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~------------~~~~~~~d~~~~~~l~~~~~~~~ 71 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMGHEVLAVDINEEKVNAYASY------------ATHAVIANATEENELLSLGIRNF 71 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT------------CSEEEECCTTCHHHHHTTTGGGC
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------------CCEEEEeCCCCHHHHHhcCCCCC
Confidence 4679999974 4444443322 367899999998765433221 235566776543 1 13579
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
|+|+...... ...........+.+.+. .+++..
T Consensus 72 d~vi~~~~~~------~~~~~~~~~~~~~~~~~-~ii~~~ 104 (144)
T 2hmt_A 72 EYVIVAIGAN------IQASTLTTLLLKELDIP-NIWVKA 104 (144)
T ss_dssp SEEEECCCSC------HHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred CEEEECCCCc------hHHHHHHHHHHHHcCCC-eEEEEe
Confidence 9999754321 00122344444556665 555444
No 434
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.02 E-value=1.1 Score=38.31 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=54.7
Q ss_pred CcEEEEcCc--ccHHHHHHHHH--CC-C-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccc--cc-ccCCC
Q 035593 79 GPIGILGFG--AGSAARLILDL--YP-E-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNAL--KA-SLKDG 149 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~--~p-~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~--~~-~~~~~ 149 (269)
.+|..||+| ++.++..|.+. .+ + .+|++++. ++.++..++..+.... ...... ...... .. .....
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~---~~~~~~-~~~~~~~~~~~~~~~~ 83 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVV---TPSRDF-LARPTCVTDNPAEVGT 83 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEE---CSSCEE-EECCSEEESCHHHHCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEE---eCCCCe-EEecceEecCccccCC
Confidence 479999999 44555666653 01 4 68999998 7666655542222110 000000 011110 11 12357
Q ss_pred eeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEe
Q 035593 150 FSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 150 yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
+|+||+...... ..+.++.+...|+++.++ +.+
T Consensus 84 ~D~vil~vk~~~-------~~~v~~~i~~~l~~~~~i-v~~ 116 (317)
T 2qyt_A 84 VDYILFCTKDYD-------MERGVAEIRPMIGQNTKI-LPL 116 (317)
T ss_dssp EEEEEECCSSSC-------HHHHHHHHGGGEEEEEEE-EEC
T ss_pred CCEEEEecCccc-------HHHHHHHHHhhcCCCCEE-EEc
Confidence 999998654332 478888888888876544 444
No 435
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.93 E-value=3.6 Score=34.81 Aligned_cols=73 Identities=10% Similarity=-0.092 Sum_probs=48.1
Q ss_pred CCCcEEEEcCccc-----HHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-------
Q 035593 77 PPGPIGILGFGAG-----SAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G-----~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~------- 144 (269)
..+.+|+.|+++| .+++.|++ .+.+|.+++.++...+.+++.... ..++.++..|..+.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE--AGAELAFTYQGDALKKRVEPLAEE-------LGAFVAGHCDVADAASIDAVF 100 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH--TTCEEEEEECSHHHHHHHHHHHHH-------HTCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHh-------cCCceEEECCCCCHHHHHHHH
Confidence 5678999998754 23344444 478999999997655554443221 13588899998764
Q ss_pred ----ccCCCeeEEEEcCC
Q 035593 145 ----SLKDGFSGILVDLF 158 (269)
Q Consensus 145 ----~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 101 ~~~~~~~g~iD~lVnnAG 118 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIG 118 (293)
T ss_dssp HHHHHHTSCCSEEEECCC
T ss_pred HHHHHhcCCCCEEEECCc
Confidence 12357999998754
No 436
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.87 E-value=2 Score=35.54 Aligned_cols=75 Identities=13% Similarity=-0.008 Sum_probs=50.9
Q ss_pred CCCcEEEEcC-cccH---HHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--------
Q 035593 77 PPGPIGILGF-GAGS---AARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-------- 144 (269)
Q Consensus 77 ~~~~VL~iG~-G~G~---~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-------- 144 (269)
..++||+.|+ |.|. +++.|++ .+.+|++++.+++-.+...+.+... ...++.++..|..+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALL--EGADVVISDYHERRLGETRDQLADL-----GLGRVEAVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTT-----CSSCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHH--CCCEEEEecCCHHHHHHHHHHHHhc-----CCCceEEEEeCCCCHHHHHHHHH
Confidence 4678999887 4442 3344444 4789999999998777666654211 135799999999874
Q ss_pred ---ccCCCeeEEEEcCC
Q 035593 145 ---SLKDGFSGILVDLF 158 (269)
Q Consensus 145 ---~~~~~yD~I~~d~~ 158 (269)
...++.|+++..+-
T Consensus 94 ~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 94 QTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCCcEEEECCC
Confidence 11247899998754
No 437
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=89.84 E-value=2.5 Score=34.55 Aligned_cols=74 Identities=8% Similarity=-0.102 Sum_probs=49.6
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----------
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----------- 144 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----------- 144 (269)
.+++|+.|+++| +++.+.+++ .+.+|.+++.+++-.+...+.+... ..++.++..|..+.
T Consensus 5 ~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 5 EKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEK------GFKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEecCCCHHHHHHHHHHHH
Confidence 567888886544 444444332 3789999999998776665544211 35789999998764
Q ss_pred ccCCCeeEEEEcCC
Q 035593 145 SLKDGFSGILVDLF 158 (269)
Q Consensus 145 ~~~~~yD~I~~d~~ 158 (269)
...++.|+++..+-
T Consensus 78 ~~~~~id~li~~Ag 91 (247)
T 3lyl_A 78 AENLAIDILVNNAG 91 (247)
T ss_dssp HTTCCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 12357899998754
No 438
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=89.81 E-value=0.73 Score=43.05 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=48.0
Q ss_pred cCCCeeEEEEcCCCCCCCCCCCC-c-------HHHHHHHHhhccCCcEEEEEecCCCccccccccchhHHHHHHHHHHHH
Q 035593 146 LKDGFSGILVDLFSKGSLLSELE-D-------PNTWEKLRQCLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEATLKAMHK 217 (269)
Q Consensus 146 ~~~~yD~I~~d~~~~~~~~~~l~-~-------~e~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (269)
...+||+||++.-.+- ...|.. . .-+=.....+|+|||.+++-.++.. +.....++..+.+
T Consensus 218 ~~~ryDlvfvn~~t~y-r~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyA----------Dr~sE~vv~alaR 286 (670)
T 4gua_A 218 PQARYDLVFINIGTKY-RNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYA----------DRNSEDVVTALAR 286 (670)
T ss_dssp CCCCEEEEEECCCCCC-CSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC----------SHHHHHHHHHHHH
T ss_pred CCCcccEEEEecCCCc-ccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeecc----------ccchHHHHHHHHh
Confidence 3569999999876542 111110 0 1233456789999999999988752 4567889999999
Q ss_pred HhcCceEEEE
Q 035593 218 VFGKKLYVLS 227 (269)
Q Consensus 218 ~F~~~v~~~~ 227 (269)
.|. .+.+..
T Consensus 287 kF~-~~rv~~ 295 (670)
T 4gua_A 287 KFV-RVSAAR 295 (670)
T ss_dssp TEE-EEEEEC
T ss_pred hee-eeeeeC
Confidence 995 566554
No 439
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.71 E-value=2.4 Score=35.30 Aligned_cols=65 Identities=20% Similarity=0.226 Sum_probs=48.0
Q ss_pred CcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEEc
Q 035593 79 GPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILVD 156 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~d 156 (269)
++||+.| + |.++..+.+.+ .+.+|+++..++.-.+.... .+++++.+|..++. -..+|+|+..
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------------~~~~~~~~D~~d~~-~~~~d~vi~~ 70 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------------SGAEPLLWPGEEPS-LDGVTHLLIS 70 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------------TTEEEEESSSSCCC-CTTCCEEEEC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------------CCCeEEEecccccc-cCCCCEEEEC
Confidence 5899999 4 88887777654 26799999998865433221 35899999988766 5678999976
Q ss_pred CC
Q 035593 157 LF 158 (269)
Q Consensus 157 ~~ 158 (269)
+.
T Consensus 71 a~ 72 (286)
T 3ius_A 71 TA 72 (286)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 440
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.70 E-value=0.98 Score=37.69 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=55.2
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCce-EEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAV-IHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~-v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.+|..||+| +..++..+.+. +.+ |.++|.+++.++.+.+.++. .+ ..|..+. -...|+|++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~-----------~~-~~~~~~~--~~~~Dvvi~ 74 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEA-----------EY-TTDLAEV--NPYAKLYIV 74 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTC-----------EE-ESCGGGS--CSCCSEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCC-----------ce-eCCHHHH--hcCCCEEEE
Confidence 589999997 33444555543 455 89999999988776665432 21 2232222 236899997
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
..... ...+.++.+...++++.++ +++.+
T Consensus 75 av~~~-------~~~~v~~~l~~~~~~~~iv-v~~s~ 103 (266)
T 3d1l_A 75 SLKDS-------AFAELLQGIVEGKREEALM-VHTAG 103 (266)
T ss_dssp CCCHH-------HHHHHHHHHHTTCCTTCEE-EECCT
T ss_pred ecCHH-------HHHHHHHHHHhhcCCCcEE-EECCC
Confidence 54322 1267777887778775544 55443
No 441
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.48 E-value=2.7 Score=34.81 Aligned_cols=72 Identities=13% Similarity=-0.002 Sum_probs=50.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+++|+.|+++| +++.+++++ .+.+|..++.+++-++...+.++ .++.++..|..+.
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---------PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CcceEEEccCCCHHHHHHHHHHH
Confidence 4678898887654 444444332 47899999999988776665542 3688999998864
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 77 ~~~~g~id~lv~nAg 91 (255)
T 4eso_A 77 GQTLGAIDLLHINAG 91 (255)
T ss_dssp HHHHSSEEEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 12257999998753
No 442
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.40 E-value=2.2 Score=34.07 Aligned_cols=96 Identities=16% Similarity=0.061 Sum_probs=55.7
Q ss_pred cEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc--ccCCCeeEEEE
Q 035593 80 PIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--SLKDGFSGILV 155 (269)
Q Consensus 80 ~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--~~~~~yD~I~~ 155 (269)
+||+.|+ +|.+++.+.+.+ .+.+|+++..++.-.+.. . .++++++.+|..+. ..-+..|+||.
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~---------~~~~~~~~~D~~d~~~~~~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---L---------GATVATLVKEPLVLTEADLDSVDAVVD 68 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---T---------CTTSEEEECCGGGCCHHHHTTCSEEEE
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc---c---------CCCceEEecccccccHhhcccCCEEEE
Confidence 5888885 455555544432 367999999998654321 1 24689999998876 22346899997
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCC-cEEEE
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKG-GRIMV 188 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pg-G~l~~ 188 (269)
.+................+.+.+.++.. +.+++
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~ 102 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVF 102 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEE
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEE
Confidence 6543211011111234445555666554 44443
No 443
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.40 E-value=2.7 Score=35.87 Aligned_cols=90 Identities=9% Similarity=0.099 Sum_probs=51.3
Q ss_pred CCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 77 PPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
++++|+.||+|. |......++.+ +.+|+++|.+++-.+.+++ ++ ++.+.. .+. ..-...|+|+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~-~g-----------~~~~~~--~~l~~~l~~aDvVi 220 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITE-MG-----------LVPFHT--DELKEHVKDIDICI 220 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TT-----------CEEEEG--GGHHHHSTTCSEEE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-CC-----------CeEEch--hhHHHHhhCCCEEE
Confidence 578999999863 22222223333 6799999999876554433 22 222211 122 2235789999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
..... ++...+ ..+.++|+++ ++|+..
T Consensus 221 ~~~p~------~~i~~~----~~~~mk~g~~-lin~a~ 247 (300)
T 2rir_A 221 NTIPS------MILNQT----VLSSMTPKTL-ILDLAS 247 (300)
T ss_dssp ECCSS------CCBCHH----HHTTSCTTCE-EEECSS
T ss_pred ECCCh------hhhCHH----HHHhCCCCCE-EEEEeC
Confidence 75432 333443 3467888665 467754
No 444
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=89.40 E-value=1.4 Score=38.26 Aligned_cols=92 Identities=15% Similarity=0.058 Sum_probs=59.3
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCe
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGF 150 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~y 150 (269)
..+|+.+|+ |..+..+++.. .+. |+++|.||+.++ +++. .+.++.+|+.+. ..-+..
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~------------~~~~i~gd~~~~~~L~~a~i~~a 178 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLRS------------GANFVHGDPTRVSDLEKANVRGA 178 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHT------------TCEEEESCTTSHHHHHHTCSTTE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhC------------CcEEEEeCCCCHHHHHhcChhhc
Confidence 347999987 56666666543 255 999999999888 5541 378999999875 235689
Q ss_pred eEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 151 SGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 151 D~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
|.|++...+.. .--......+.+.|...++.-..+
T Consensus 179 ~~vi~~~~~d~-------~n~~~~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 179 RAVIVDLESDS-------ETIHCILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp EEEEECCSSHH-------HHHHHHHHHHTTCTTSEEEEECSS
T ss_pred cEEEEcCCccH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 99987443210 122334455667777666665543
No 445
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=89.38 E-value=1.9 Score=37.64 Aligned_cols=69 Identities=16% Similarity=0.028 Sum_probs=44.0
Q ss_pred CCcEEEEcCcc-cH--HHHHHHHHCCCceEE-EEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEE
Q 035593 78 PGPIGILGFGA-GS--AARLILDLYPEAVIH-GWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGI 153 (269)
Q Consensus 78 ~~~VL~iG~G~-G~--~~~~l~~~~p~~~v~-~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I 153 (269)
+.+|..||||. |. .+..+.+ .|+.+++ ++|.+++..+...+.++. ... .|..+.......|+|
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~-~~~~~l~av~d~~~~~~~~~a~~~g~-----------~~~-~~~~~ll~~~~~D~V 93 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEA-EPLTEVTAIASRRWDRAKRFTERFGG-----------EPV-EGYPALLERDDVDAV 93 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHH-CTTEEEEEEEESSHHHHHHHHHHHCS-----------EEE-ESHHHHHTCTTCSEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHHh-CCCeEEEEEEcCCHHHHHHHHHHcCC-----------CCc-CCHHHHhcCCCCCEE
Confidence 46899999984 32 3444444 5788877 559999877766555543 222 455555445678888
Q ss_pred EEcCCC
Q 035593 154 LVDLFS 159 (269)
Q Consensus 154 ~~d~~~ 159 (269)
++....
T Consensus 94 ~i~tp~ 99 (350)
T 3rc1_A 94 YVPLPA 99 (350)
T ss_dssp EECCCG
T ss_pred EECCCc
Confidence 875443
No 446
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.22 E-value=0.87 Score=32.34 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=42.4
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CC-ceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCCCe
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PE-AVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKDGF 150 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~-~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~~y 150 (269)
..+|+.+|+ |.++..+.+.. .+ .+|++++.+++-++..+. ..++++..|..+. ..-..+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR------------MGVATKQVDAKDEAGLAKALGGF 70 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT------------TTCEEEECCTTCHHHHHHHTTTC
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh------------CCCcEEEecCCCHHHHHHHHcCC
Confidence 458999998 44444333321 24 799999999987766541 2356677777653 223578
Q ss_pred eEEEEcC
Q 035593 151 SGILVDL 157 (269)
Q Consensus 151 D~I~~d~ 157 (269)
|+|+..+
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9999754
No 447
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.20 E-value=0.54 Score=43.59 Aligned_cols=91 Identities=14% Similarity=0.084 Sum_probs=54.4
Q ss_pred CCCCCcEEEEcCc-ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEE
Q 035593 75 ILPPGPIGILGFG-AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGI 153 (269)
Q Consensus 75 l~~~~~VL~iG~G-~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I 153 (269)
..+.++|+++|+| -|......++.+ +.+|+++|+++.-.+.|++. +. ++ .+..+. -...|+|
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~-Ga-----------~~--~~l~e~--l~~aDvV 333 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME-GF-----------DV--VTVEEA--IGDADIV 333 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-TC-----------EE--CCHHHH--GGGCSEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CC-----------EE--ecHHHH--HhCCCEE
Confidence 4568899999987 343334444443 67999999999888777653 21 11 122111 2468999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
+..... .++.. ....+.|++||+++ |+..
T Consensus 334 i~atgt-----~~~i~----~~~l~~mk~ggilv-nvG~ 362 (494)
T 3ce6_A 334 VTATGN-----KDIIM----LEHIKAMKDHAILG-NIGH 362 (494)
T ss_dssp EECSSS-----SCSBC----HHHHHHSCTTCEEE-ECSS
T ss_pred EECCCC-----HHHHH----HHHHHhcCCCcEEE-EeCC
Confidence 864321 12222 24455689988774 5543
No 448
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.14 E-value=2.5 Score=36.94 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=55.1
Q ss_pred CCCCCCcEEEEcC--cccHHHHHHHHHCCCc-eEEEEECChH---HHHHHHHhcCccccccCCCCcEEEEEc------cc
Q 035593 74 PILPPGPIGILGF--GAGSAARLILDLYPEA-VIHGWELDPS---VIKVAREFFALEKLEKSYPDRLFVYVG------NA 141 (269)
Q Consensus 74 ~l~~~~~VL~iG~--G~G~~~~~l~~~~p~~-~v~~vEidp~---~~~~a~~~~~~~~~~~~~~~rv~~~~~------D~ 141 (269)
.+.+..+||++|+ |.|.++..+++.. ++ .|.+++.++. -.+.+++ ++.. .++.. +.
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~-lGa~----------~vi~~~~~~~~~~ 231 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKS-LGAE----------HVITEEELRRPEM 231 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHH-TTCS----------EEEEHHHHHSGGG
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHh-cCCc----------EEEecCcchHHHH
Confidence 4567899999996 4677888888865 55 4556666543 3556654 3321 12211 11
Q ss_pred cccccC-CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 142 LKASLK-DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 142 ~~~~~~-~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
.+.... ..+|+|+ |+.. ...+ ..+.+.|+++|.++.-
T Consensus 232 ~~~~~~~~~~Dvvi-d~~g---------~~~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 232 KNFFKDMPQPRLAL-NCVG---------GKSS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp GGTTSSSCCCSEEE-ESSC---------HHHH-HHHHTTSCTTCEEEEC
T ss_pred HHHHhCCCCceEEE-ECCC---------cHHH-HHHHHhhCCCCEEEEE
Confidence 122111 2599987 4322 1223 4578999999998764
No 449
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=89.07 E-value=3.5 Score=33.30 Aligned_cols=75 Identities=9% Similarity=-0.091 Sum_probs=48.9
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----c------
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----S------ 145 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~------ 145 (269)
.+.+|+.|+++ .+++.+++++ .+.+|..++.+++-.+...+.+.... ..++.++..|..+. .
T Consensus 2 ~k~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITGASR-GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-----GVEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----CCCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 35688888654 4444444433 37899999999887766554432111 35799999998864 0
Q ss_pred -cCCCeeEEEEcCC
Q 035593 146 -LKDGFSGILVDLF 158 (269)
Q Consensus 146 -~~~~yD~I~~d~~ 158 (269)
..++.|+++..+-
T Consensus 76 ~~~g~id~li~~Ag 89 (235)
T 3l77_A 76 ERFGDVDVVVANAG 89 (235)
T ss_dssp HHHSSCSEEEECCC
T ss_pred HhcCCCCEEEECCc
Confidence 1247899998754
No 450
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.06 E-value=1.8 Score=39.83 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=61.2
Q ss_pred CCCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEE
Q 035593 77 PPGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGI 153 (269)
Q Consensus 77 ~~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I 153 (269)
..++|..||+| ++.++..|++ .+.+|++.+.+++.++...+..+ +..+.. ..|..+. ..-++.|+|
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~--~G~~V~v~~r~~~~~~~l~~~~~--------~~gi~~-~~s~~e~v~~l~~aDvV 82 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIES--RGYTVSIFNRSREKTEEVIAENP--------GKKLVP-YYTVKEFVESLETPRRI 82 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHT--TTCCEEEECSSHHHHHHHHHHST--------TSCEEE-CSSHHHHHHTBCSSCEE
T ss_pred CCCeEEEEccHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHHHHhhCC--------CCCeEE-eCCHHHHHhCCCCCCEE
Confidence 35689999998 3445555554 46789999999988876665431 012322 1233333 222358999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++.+... ....+.++.+...|++|- +++++.+.
T Consensus 83 il~Vp~~------~~v~~vl~~l~~~l~~g~-iIId~s~g 115 (480)
T 2zyd_A 83 LLMVKAG------AGTDAAIDSLKPYLDKGD-IIIDGGNT 115 (480)
T ss_dssp EECSCSS------SHHHHHHHHHGGGCCTTC-EEEECSCC
T ss_pred EEECCCH------HHHHHHHHHHHhhcCCCC-EEEECCCC
Confidence 9865432 125678888888888755 55666554
No 451
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.95 E-value=1.6 Score=40.05 Aligned_cols=97 Identities=12% Similarity=0.104 Sum_probs=59.8
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEE
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILV 155 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~ 155 (269)
.+|..||+| +..++..+++ .+.+|.+++.+++.++...+..+ ...+.. ..|..+. ...++.|+|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~l~~~~~--------~~gi~~-~~s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES--RGYTVAIYNRTTSKTEEVFKEHQ--------DKNLVF-TKTLEEFVGSLEKPRRIML 74 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSHHHHHHHHHHTT--------TSCEEE-CSSHHHHHHTBCSSCEEEE
T ss_pred CcEEEEeeHHHHHHHHHHHHh--CCCEEEEEcCCHHHHHHHHHhCc--------CCCeEE-eCCHHHHHhhccCCCEEEE
Confidence 479999998 3445555555 35689999999988877665432 012321 2333333 22245899998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
..... ....+.++.+...|++|- +++++.+.
T Consensus 75 avp~~------~~v~~vl~~l~~~l~~g~-iiId~s~~ 105 (474)
T 2iz1_A 75 MVQAG------AATDATIKSLLPLLDIGD-ILIDGGNT 105 (474)
T ss_dssp CCCTT------HHHHHHHHHHGGGCCTTC-EEEECSCC
T ss_pred EccCc------hHHHHHHHHHHhhCCCCC-EEEECCCC
Confidence 65432 124577788888888765 45566443
No 452
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=88.89 E-value=2.2 Score=34.86 Aligned_cols=72 Identities=14% Similarity=0.034 Sum_probs=49.5
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-------ccC
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-------SLK 147 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-------~~~ 147 (269)
+.++||+.|+++| +++.+++.+ .+.+|.+++.+++-++...+.+. .++.++..|..+. ...
T Consensus 13 ~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 13 TGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---------DNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------SSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---------cCccEEEcCCCCHHHHHHHHHhc
Confidence 4678888887654 444444332 37899999999987776655542 3688888998764 233
Q ss_pred CCeeEEEEcCC
Q 035593 148 DGFSGILVDLF 158 (269)
Q Consensus 148 ~~yD~I~~d~~ 158 (269)
++.|+++..+.
T Consensus 83 ~~id~li~~Ag 93 (249)
T 3f9i_A 83 SNLDILVCNAG 93 (249)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999998653
No 453
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.88 E-value=0.43 Score=42.08 Aligned_cols=92 Identities=16% Similarity=0.145 Sum_probs=58.6
Q ss_pred CCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-c-cCCCeeEE
Q 035593 78 PGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-S-LKDGFSGI 153 (269)
Q Consensus 78 ~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~-~~~~yD~I 153 (269)
..+|..||+| ++.++..+.+ .+.+|+++|.+++.++.+++. + +.. ..|..+. . .....|+|
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~--~G~~V~~~dr~~~~~~~a~~~-G-----------~~~-~~~~~e~~~~a~~~aDlV 72 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHA--ANHSVFGYNRSRSGAKSAVDE-G-----------FDV-SADLEATLQRAAAEDALI 72 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSCHHHHHHHHHT-T-----------CCE-ESCHHHHHHHHHHTTCEE
T ss_pred CCEEEEEeecHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHc-C-----------Cee-eCCHHHHHHhcccCCCEE
Confidence 4589999998 5667777766 367999999999988887653 2 111 2233222 1 11246999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 154 LVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 154 ~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
++..... ...+.++.+... +|+ .+++++.+.
T Consensus 73 ilavP~~-------~~~~vl~~l~~~-~~~-~iv~Dv~Sv 103 (341)
T 3ktd_A 73 VLAVPMT-------AIDSLLDAVHTH-APN-NGFTDVVSV 103 (341)
T ss_dssp EECSCHH-------HHHHHHHHHHHH-CTT-CCEEECCSC
T ss_pred EEeCCHH-------HHHHHHHHHHcc-CCC-CEEEEcCCC
Confidence 9854321 245777777765 665 667777554
No 454
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.80 E-value=2.6 Score=35.89 Aligned_cols=75 Identities=11% Similarity=-0.024 Sum_probs=51.6
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.||+.|+++| +++.+++.+ .+.+|.+++.+++-++.+.+.+... ..++.++..|..+.
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ------GFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHHHHH
Confidence 4678999987755 444443332 4789999999998877766654311 35789999998875
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
...++.|+++.++-
T Consensus 103 ~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHSSCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 11247899998754
No 455
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.78 E-value=5.5 Score=33.17 Aligned_cols=75 Identities=8% Similarity=-0.069 Sum_probs=47.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECC------------hHHHHHHHHhcCccccccCCCCcEEEEEcccc
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELD------------PSVIKVAREFFALEKLEKSYPDRLFVYVGNAL 142 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEid------------p~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~ 142 (269)
..+.||+.|+++| +++.+++++ .+.+|.+++.+ .+-++.+...+... ..++.++..|..
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~ 81 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT------GRKAYTAEVDVR 81 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT------TSCEEEEECCTT
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc------CCceEEEEccCC
Confidence 4678888887654 444433332 37899999987 55554444433211 357999999988
Q ss_pred cc-----------ccCCCeeEEEEcCC
Q 035593 143 KA-----------SLKDGFSGILVDLF 158 (269)
Q Consensus 143 ~~-----------~~~~~yD~I~~d~~ 158 (269)
+. ..-++.|+++.++-
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 64 11247899998753
No 456
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.75 E-value=0.39 Score=41.91 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=50.6
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEc-ccc-ccccCCCeeEEE
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVG-NAL-KASLKDGFSGIL 154 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~-D~~-~~~~~~~yD~I~ 154 (269)
.+|++||+| ++.++..|++ .+.+|+.++.++ .++..++. ++... .+..+.... .+. +...-..+|+|+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~--~g~~V~~~~r~~-~~~~~~~~-g~~~~----~~~~~~~~~~~~~~~~~~~~~~D~Vi 75 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLAL--AGEAINVLARGA-TLQALQTA-GLRLT----EDGATHTLPVRATHDAAALGEQDVVI 75 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHH--TTCCEEEECCHH-HHHHHHHT-CEEEE----ETTEEEEECCEEESCHHHHCCCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCEEEEEEChH-HHHHHHHC-CCEEe----cCCCeEEEeeeEECCHHHcCCCCEEE
Confidence 589999998 3445555555 356899999864 44443332 22110 011111110 000 011125799999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEE
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMV 188 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~ 188 (269)
+..... ...+.++.+...|+++.+++.
T Consensus 76 lavk~~-------~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 76 VAVKAP-------ALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp ECCCHH-------HHHHHHGGGSSSCCTTCEEEE
T ss_pred EeCCch-------hHHHHHHHHHhhCCCCCEEEE
Confidence 854321 245677777777777766554
No 457
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.71 E-value=3.3 Score=35.24 Aligned_cols=90 Identities=10% Similarity=0.100 Sum_probs=51.0
Q ss_pred CCCcEEEEcCcc-cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEE
Q 035593 77 PPGPIGILGFGA-GSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGIL 154 (269)
Q Consensus 77 ~~~~VL~iG~G~-G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~ 154 (269)
+.++|+.||+|. |......++.+ +.+|++++.+++-.+.+++ ++ ++.+. ..++ ..-...|+|+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~-~g-----------~~~~~--~~~l~~~l~~aDvVi 218 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIAE-MG-----------MEPFH--ISKAAQELRDVDVCI 218 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TT-----------SEEEE--GGGHHHHTTTCSEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-CC-----------CeecC--hhhHHHHhcCCCEEE
Confidence 578999999872 33222333333 6799999999876555443 22 12221 1122 2235789999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 155 VDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 155 ~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
..+. .++...+. .+.+++++++ +|+..
T Consensus 219 ~~~p------~~~i~~~~----l~~mk~~~~l-in~ar 245 (293)
T 3d4o_A 219 NTIP------ALVVTANV----LAEMPSHTFV-IDLAS 245 (293)
T ss_dssp ECCS------SCCBCHHH----HHHSCTTCEE-EECSS
T ss_pred ECCC------hHHhCHHH----HHhcCCCCEE-EEecC
Confidence 7543 23334443 3467886654 67753
No 458
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.71 E-value=1.7 Score=39.92 Aligned_cols=105 Identities=10% Similarity=-0.010 Sum_probs=61.1
Q ss_pred CCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHH-HHHHhc------C-ccccc-cCCCCcEEEEEcccccccc
Q 035593 78 PGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIK-VAREFF------A-LEKLE-KSYPDRLFVYVGNALKASL 146 (269)
Q Consensus 78 ~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~-~a~~~~------~-~~~~~-~~~~~rv~~~~~D~~~~~~ 146 (269)
-++|.+||+| ++.++..+++ .+.+|+++|++++-.. ..++.+ + +.... .....++++. .|.. .
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~--aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl~---a 127 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGL--AGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDFH---K 127 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCGG---G
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCHH---H
Confidence 3689999999 4556666665 4789999999998211 011111 0 00000 0001244432 2322 2
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
-...|+||..++... -...++|+++...++|+.+++.|..+.
T Consensus 128 l~~aDlVIeAVpe~~-----~vk~~v~~~l~~~~~~~aIlasnTSsl 169 (460)
T 3k6j_A 128 LSNCDLIVESVIEDM-----KLKKELFANLENICKSTCIFGTNTSSL 169 (460)
T ss_dssp CTTCSEEEECCCSCH-----HHHHHHHHHHHTTSCTTCEEEECCSSS
T ss_pred HccCCEEEEcCCCCH-----HHHHHHHHHHHhhCCCCCEEEecCCCh
Confidence 356899997654321 113578899999999998888777543
No 459
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.68 E-value=4.3 Score=34.78 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=55.3
Q ss_pred CCcEEEEcCc--ccHHHHHHHHHCCCc-eEEEEECC--hHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeE
Q 035593 78 PGPIGILGFG--AGSAARLILDLYPEA-VIHGWELD--PSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSG 152 (269)
Q Consensus 78 ~~~VL~iG~G--~G~~~~~l~~~~p~~-~v~~vEid--p~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~ 152 (269)
..+|..||+| +..++..|++. +. +|+++|.+ ++..+.+++. + ++. ..+..+. -...|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~-g-----------~~~-~~~~~e~--~~~aDv 86 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEEL-G-----------VSC-KASVAEV--AGECDV 86 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHT-T-----------CEE-CSCHHHH--HHHCSE
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHC-C-----------CEE-eCCHHHH--HhcCCE
Confidence 3589999998 34555666653 55 89999997 5666665542 2 121 1122111 235799
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 153 ILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 153 I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
|++.+.... ..+.++.+...|+++.+ +++..+.
T Consensus 87 Vi~~vp~~~-------~~~~~~~l~~~l~~~~i-vvd~st~ 119 (312)
T 3qsg_A 87 IFSLVTAQA-------ALEVAQQAGPHLCEGAL-YADFTSC 119 (312)
T ss_dssp EEECSCTTT-------HHHHHHHHGGGCCTTCE-EEECCCC
T ss_pred EEEecCchh-------HHHHHHhhHhhcCCCCE-EEEcCCC
Confidence 998655432 34677888888988654 4555443
No 460
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=88.67 E-value=1.3 Score=40.79 Aligned_cols=99 Identities=17% Similarity=0.171 Sum_probs=59.2
Q ss_pred cEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEEc
Q 035593 80 PIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILVD 156 (269)
Q Consensus 80 ~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~d 156 (269)
+|..||+| ++.++..|++ .+.+|++++.+++.++...+..+..+ ...++. ...|..+. ..-+..|+|++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~--~G~~V~v~dr~~~~~~~l~~~~g~~~----~~~~i~-~~~~~~e~v~~l~~aDvVila 75 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAE--KGFKVAVFNRTYSKSEEFMKANASAP----FAGNLK-AFETMEAFAASLKKPRKALIL 75 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHH--TTCCEEEECSSHHHHHHHHHHTTTST----TGGGEE-ECSCHHHHHHHBCSSCEEEEC
T ss_pred EEEEEChHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHhcCCCC----CCCCeE-EECCHHHHHhcccCCCEEEEe
Confidence 68999988 3444555555 35689999999998877766543211 011232 12233332 222358999986
Q ss_pred CCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 157 LFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 157 ~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
.... ....+.++.+...|++|- ++++..+
T Consensus 76 Vp~~------~~v~~vl~~l~~~l~~g~-iIId~sn 104 (478)
T 1pgj_A 76 VQAG------AATDSTIEQLKKVFEKGD-ILVDTGN 104 (478)
T ss_dssp CCCS------HHHHHHHHHHHHHCCTTC-EEEECCC
T ss_pred cCCh------HHHHHHHHHHHhhCCCCC-EEEECCC
Confidence 5432 114677888888898865 4556543
No 461
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=88.62 E-value=2.5 Score=35.40 Aligned_cols=74 Identities=12% Similarity=-0.082 Sum_probs=49.2
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----------
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----------- 144 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----------- 144 (269)
.+.+|+.|+++| +++.+++.+ .+.+|.+++.+++-++...+.+... ..++.++..|..+.
T Consensus 4 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~ 76 (264)
T 3tfo_A 4 DKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDA------GGTALAQVLDVTDRHSVAAFAQAAV 76 (264)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 466788776644 444444332 4789999999998777665554211 35688889998764
Q ss_pred ccCCCeeEEEEcCC
Q 035593 145 SLKDGFSGILVDLF 158 (269)
Q Consensus 145 ~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 77 ~~~g~iD~lVnnAG 90 (264)
T 3tfo_A 77 DTWGRIDVLVNNAG 90 (264)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 12257899998753
No 462
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=88.61 E-value=1.3 Score=38.50 Aligned_cols=70 Identities=19% Similarity=0.237 Sum_probs=41.5
Q ss_pred CCcEEEEcCcc-c-HHHHHHHHHCCCceEE-EEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 78 PGPIGILGFGA-G-SAARLILDLYPEAVIH-GWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 78 ~~~VL~iG~G~-G-~~~~~l~~~~p~~~v~-~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+|..||||. | ..+..+.+..++.+++ ++|.+++..+.+.+.++.+ . ...|..+.......|+|+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~----------~-~~~~~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVE----------T-TYTNYKDMIDTENIDAIF 76 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCS----------E-EESCHHHHHTTSCCSEEE
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCC----------c-ccCCHHHHhcCCCCCEEE
Confidence 45899999984 3 2334444235677765 5699998876655554421 1 224444443334688888
Q ss_pred EcCC
Q 035593 155 VDLF 158 (269)
Q Consensus 155 ~d~~ 158 (269)
+...
T Consensus 77 i~tp 80 (346)
T 3cea_A 77 IVAP 80 (346)
T ss_dssp ECSC
T ss_pred EeCC
Confidence 7543
No 463
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.44 E-value=1.3 Score=38.50 Aligned_cols=73 Identities=16% Similarity=0.099 Sum_probs=49.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC---CCc-eEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----ccCC
Q 035593 77 PPGPIGILGFGAGSAARLILDLY---PEA-VIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----SLKD 148 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~---p~~-~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----~~~~ 148 (269)
..++||+.|+ +|.++..+.+++ ++. +|++++.++.-.+..++.+. .++++++.+|..+. ..-+
T Consensus 20 ~~k~vlVTGa-tG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--------~~~v~~~~~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 20 DNQTILITGG-TGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--------DPRMRFFIGDVRDLERLNYALE 90 (344)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--------CTTEEEEECCTTCHHHHHHHTT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--------CCCEEEEECCCCCHHHHHHHHh
Confidence 4678998885 455555554432 255 99999999876655444432 25799999999875 2234
Q ss_pred CeeEEEEcCC
Q 035593 149 GFSGILVDLF 158 (269)
Q Consensus 149 ~yD~I~~d~~ 158 (269)
..|+||..+.
T Consensus 91 ~~D~Vih~Aa 100 (344)
T 2gn4_A 91 GVDICIHAAA 100 (344)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEECCC
Confidence 7899997653
No 464
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=88.41 E-value=1.6 Score=37.71 Aligned_cols=67 Identities=13% Similarity=0.135 Sum_probs=42.4
Q ss_pred CcEEEEcCcc-c-HHHHHHHHHCCCceEE-EEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 79 GPIGILGFGA-G-SAARLILDLYPEAVIH-GWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 79 ~~VL~iG~G~-G-~~~~~l~~~~p~~~v~-~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
.+|..||||. | ..+..+.+ .++.+++ ++|.+++..+...+.++ +. ..|..+.......|+|++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~-~~~~~l~av~d~~~~~~~~~~~~~~-----------~~--~~~~~~~l~~~~~D~V~i 69 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG-NADARLVAVADAFPAAAEAIAGAYG-----------CE--VRTIDAIEAAADIDAVVI 69 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-CTTEEEEEEECSSHHHHHHHHHHTT-----------CE--ECCHHHHHHCTTCCEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhh-CCCcEEEEEECCCHHHHHHHHHHhC-----------CC--cCCHHHHhcCCCCCEEEE
Confidence 4799999984 2 23334443 5788887 58999988776655543 22 345555433456888887
Q ss_pred cCCC
Q 035593 156 DLFS 159 (269)
Q Consensus 156 d~~~ 159 (269)
....
T Consensus 70 ~tp~ 73 (331)
T 4hkt_A 70 CTPT 73 (331)
T ss_dssp CSCG
T ss_pred eCCc
Confidence 5543
No 465
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.28 E-value=2.2 Score=39.29 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=60.2
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhc-Cc--cccccC----CCCcEEEEEccccccccCCC
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFF-AL--EKLEKS----YPDRLFVYVGNALKASLKDG 149 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~-~~--~~~~~~----~~~rv~~~~~D~~~~~~~~~ 149 (269)
.+|..||+| ++.++..|++..++.+|+++|++++.++..++.. .. +..... ...++++ ..|..+ .-..
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~--~~~~ 86 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPK--AIAE 86 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHH--HHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHH--Hhhc
Confidence 489999999 4455666776545779999999999888765421 00 000000 0012222 122111 1135
Q ss_pred eeEEEEcCCCCCCC-------CCCC-CcHHHHHHHHhhccCCcEEEEEe
Q 035593 150 FSGILVDLFSKGSL-------LSEL-EDPNTWEKLRQCLRKGGRIMVNV 190 (269)
Q Consensus 150 yD~I~~d~~~~~~~-------~~~l-~~~e~~~~~~~~L~pgG~l~~~~ 190 (269)
.|+||+....+... .+.+ ...+.++.+.+.|++|-++ ++.
T Consensus 87 aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iV-V~~ 134 (481)
T 2o3j_A 87 ADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIV-VEK 134 (481)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEE-EEC
T ss_pred CCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEE-EEC
Confidence 79999876544210 0111 1356778888889885544 554
No 466
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=88.26 E-value=1.5 Score=37.37 Aligned_cols=77 Identities=17% Similarity=0.184 Sum_probs=48.2
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEE-Ecccccc----ccCC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVY-VGNALKA----SLKD 148 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~-~~D~~~~----~~~~ 148 (269)
.+.++||+.|+ +|.++.++.+.+ .+.+|++++.++.-.+...+.+... ...+++++ .+|..+. ..-+
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~ 82 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-----YPGRFETAVVEDMLKQGAYDEVIK 82 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----STTTEEEEECSCTTSTTTTTTTTT
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc-----CCCceEEEEecCCcChHHHHHHHc
Confidence 34678999986 455555554432 3679999999887654443332110 02468888 7898765 2223
Q ss_pred CeeEEEEcCC
Q 035593 149 GFSGILVDLF 158 (269)
Q Consensus 149 ~yD~I~~d~~ 158 (269)
..|+|+..+.
T Consensus 83 ~~d~vih~A~ 92 (342)
T 1y1p_A 83 GAAGVAHIAS 92 (342)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEEeCC
Confidence 6899997654
No 467
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=88.23 E-value=4 Score=33.83 Aligned_cols=77 Identities=17% Similarity=0.080 Sum_probs=50.3
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+.+++ .+.+|.+++.+++-.+.+.+.+.... ...++.++..|..+.
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF----PGARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc----CCceEEEEeCCCCCHHHHHHHHHHH
Confidence 4677888887655 444443332 37899999999987766655442100 134689999998864
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 82 ~~~~g~id~lvnnAg 96 (265)
T 3lf2_A 82 ERTLGCASILVNNAG 96 (265)
T ss_dssp HHHHCSCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11257899998764
No 468
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=88.20 E-value=4.6 Score=33.87 Aligned_cols=72 Identities=11% Similarity=0.027 Sum_probs=48.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+++.+ .+.+|.+++.+++-.+...+.. ..++.++..|..+.
T Consensus 26 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 26 NQRVCIVTGGGSG-IGRATAELFAKNGAYVVVADVNEDAAVRVANEI---------GSKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------CCceEEEEecCCCHHHHHHHHHHH
Confidence 4677888887654 444444332 4789999999998776655543 24688899998764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 96 ~~~~g~iD~lv~nAg 110 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAG 110 (277)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11247899998764
No 469
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=88.18 E-value=4.1 Score=33.95 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=47.1
Q ss_pred CcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----------c
Q 035593 79 GPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----------S 145 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----------~ 145 (269)
+.||+-|++.| +++.+++.+ .+++|..++++++..+...+. .+++..+.+|..+. .
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~v~~~~~ 71 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----------RPNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----------CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------cCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 56888887665 333333333 488999999999876654443 24688889998764 1
Q ss_pred cCCCeeEEEEcCC
Q 035593 146 LKDGFSGILVDLF 158 (269)
Q Consensus 146 ~~~~yD~I~~d~~ 158 (269)
.-++.|+++.++-
T Consensus 72 ~~g~iDiLVNNAG 84 (247)
T 3ged_A 72 KLQRIDVLVNNAC 84 (247)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 2367899998763
No 470
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.15 E-value=1.4 Score=40.45 Aligned_cols=67 Identities=16% Similarity=0.145 Sum_probs=49.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC-CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----ccCCCe
Q 035593 77 PPGPIGILGFGAGSAARLILDLY-PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----SLKDGF 150 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~-p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----~~~~~y 150 (269)
+.++|+.+|+| .++..+++.. ...+|..+|.|++-.+...+.+ ++..+++||+.+. ..-+..
T Consensus 234 ~~~~v~I~GgG--~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l----------~~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 234 PYRRIMIVGGG--NIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL----------ENTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC----------TTSEEEESCTTCHHHHHHTTGGGC
T ss_pred cccEEEEEcch--HHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC----------CCceEEeccccchhhHhhcCchhh
Confidence 46789998866 3444444433 3679999999999988877765 3578999999985 234678
Q ss_pred eEEEE
Q 035593 151 SGILV 155 (269)
Q Consensus 151 D~I~~ 155 (269)
|+++.
T Consensus 302 D~~ia 306 (461)
T 4g65_A 302 DVFIA 306 (461)
T ss_dssp SEEEE
T ss_pred cEEEE
Confidence 99885
No 471
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.14 E-value=1.9 Score=36.74 Aligned_cols=93 Identities=14% Similarity=0.154 Sum_probs=54.3
Q ss_pred CCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEEE
Q 035593 78 PGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGILV 155 (269)
Q Consensus 78 ~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~~ 155 (269)
..+|..||+| +..++..|++ .+.+|+++|.+++.++.+.+. +. .....+..+. -...|+|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~~~~~~~~~~~-g~-----------~~~~~~~~e~--~~~aDvvi~ 70 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR--AGLSTWGADLNPQACANLLAE-GA-----------CGAAASAREF--AGVVDALVI 70 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHT-TC-----------SEEESSSTTT--TTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCeEEEEECCHHHHHHHHHc-CC-----------ccccCCHHHH--HhcCCEEEE
Confidence 3579999988 3344555555 367999999999988776653 11 1112232222 245799998
Q ss_pred cCCCCCCCCCCCCcHHHH---HHHHhhccCCcEEEEEecCC
Q 035593 156 DLFSKGSLLSELEDPNTW---EKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~---~~~~~~L~pgG~l~~~~~~~ 193 (269)
...... ...+.+ +.+...|++|. ++++..+.
T Consensus 71 ~vp~~~------~~~~v~~~~~~l~~~l~~g~-ivv~~st~ 104 (303)
T 3g0o_A 71 LVVNAA------QVRQVLFGEDGVAHLMKPGS-AVMVSSTI 104 (303)
T ss_dssp CCSSHH------HHHHHHC--CCCGGGSCTTC-EEEECSCC
T ss_pred ECCCHH------HHHHHHhChhhHHhhCCCCC-EEEecCCC
Confidence 654321 122333 44556777755 45666543
No 472
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.07 E-value=4.8 Score=33.31 Aligned_cols=73 Identities=10% Similarity=-0.039 Sum_probs=50.7
Q ss_pred CCCcEEEEcCcccH---HHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---------
Q 035593 77 PPGPIGILGFGAGS---AARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~---~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--------- 144 (269)
..+.+|+.|+++|. +++.|++ .+.+|..++.+++-++...+.+... ..++.++..|..+.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAE--QGADLVLAARTVERLEDVAKQVTDT------GRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHH--CcCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 46788999886653 2333433 4789999999998777665554211 35799999998874
Q ss_pred --ccCCCeeEEEEcC
Q 035593 145 --SLKDGFSGILVDL 157 (269)
Q Consensus 145 --~~~~~yD~I~~d~ 157 (269)
..-++.|+++.++
T Consensus 82 ~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 82 TMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHTSCCSEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 1235789999876
No 473
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.01 E-value=3.8 Score=35.22 Aligned_cols=77 Identities=8% Similarity=-0.103 Sum_probs=50.9
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.||+.|+++| ++..+++.+ .+.+|.+++.+++-.+.+.+.+.... ...++.++..|..+.
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG----SGPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3568999997655 333333332 47899999999987776655442111 123799999998764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
...+..|+++.++-
T Consensus 82 ~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 82 EARFGPVSILCNNAG 96 (319)
T ss_dssp HHHTCCEEEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 12357899998764
No 474
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.91 E-value=6 Score=33.35 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=46.7
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChH-HHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPS-VIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~-~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
.++||+.|+++| +++.+++++ .+.+|.+++.+++ ..+...+.... ...++.++..|..+.
T Consensus 47 gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 47 GKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK------EGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT------TTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh------cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 567888887654 444444432 4789999999865 33333333221 135789999998864
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 120 ~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 120 VRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 12347899998753
No 475
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=87.88 E-value=3.2 Score=34.84 Aligned_cols=72 Identities=10% Similarity=0.003 Sum_probs=48.4
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.||+.|+++| +++.+++++ .+.+|.+++.+++-.+...+.++ .++.++..|..+.
T Consensus 28 ~gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~ 97 (277)
T 3gvc_A 28 AGKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKIG---------CGAAACRVDVSDEQQIIAMVDAC 97 (277)
T ss_dssp TTCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC---------SSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---------CcceEEEecCCCHHHHHHHHHHH
Confidence 3567888887655 333333322 47899999999987776655542 3578888998764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++..+-
T Consensus 98 ~~~~g~iD~lvnnAg 112 (277)
T 3gvc_A 98 VAAFGGVDKLVANAG 112 (277)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11247899998753
No 476
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=87.84 E-value=0.8 Score=39.90 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=46.5
Q ss_pred CCcEEEEcCcc-cH-HHHHHHHHCCCceEEE-EECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 78 PGPIGILGFGA-GS-AARLILDLYPEAVIHG-WELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 78 ~~~VL~iG~G~-G~-~~~~l~~~~p~~~v~~-vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
..||-.||||. |. ......+..|+.++++ +|.|++-.+...+.++.+ + ...|..+.......|+|+
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~--------~---~y~d~~ell~~~~iDaV~ 91 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVP--------H---AFGSYEEMLASDVIDAVY 91 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCS--------E---EESSHHHHHHCSSCSEEE
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCC--------e---eeCCHHHHhcCCCCCEEE
Confidence 34899999985 32 1222334468888874 699998877766666532 1 235655554456789998
Q ss_pred EcCCCC
Q 035593 155 VDLFSK 160 (269)
Q Consensus 155 ~d~~~~ 160 (269)
+..+..
T Consensus 92 I~tP~~ 97 (350)
T 4had_A 92 IPLPTS 97 (350)
T ss_dssp ECSCGG
T ss_pred EeCCCc
Confidence 865443
No 477
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.69 E-value=2.1 Score=37.20 Aligned_cols=90 Identities=8% Similarity=-0.119 Sum_probs=54.2
Q ss_pred CCCcEEEEcCc---ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-------cc
Q 035593 77 PPGPIGILGFG---AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-------SL 146 (269)
Q Consensus 77 ~~~~VL~iG~G---~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-------~~ 146 (269)
+..+.+.|-+| .|..+..+++.. +++|++++.+++-.+.+++. +.. .++..+-.++ ..
T Consensus 163 ~g~~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~-Ga~----------~~~~~~~~~~~~~v~~~~~ 230 (349)
T 3pi7_A 163 EGEKAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDI-GAA----------HVLNEKAPDFEATLREVMK 230 (349)
T ss_dssp HCCSEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHH-TCS----------EEEETTSTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCC----------EEEECCcHHHHHHHHHHhc
Confidence 34344445333 455555666643 67999999999988888764 321 1222111122 12
Q ss_pred CCCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEE
Q 035593 147 KDGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVN 189 (269)
Q Consensus 147 ~~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~ 189 (269)
...+|+|+- +.. .+.++.+.+.|+++|.+++-
T Consensus 231 ~~g~D~vid-~~g----------~~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 231 AEQPRIFLD-AVT----------GPLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HHCCCEEEE-SSC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCcEEEE-CCC----------ChhHHHHHhhhcCCCEEEEE
Confidence 347999984 321 23457788999999998874
No 478
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=87.66 E-value=4.8 Score=33.03 Aligned_cols=71 Identities=14% Similarity=-0.010 Sum_probs=49.4
Q ss_pred CCCcEEEEcCcccH---HHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc---------
Q 035593 77 PPGPIGILGFGAGS---AARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA--------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~---~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~--------- 144 (269)
..++||+.|+++|. +++.|++ .+.+|.+++.+++-++...+.++ .++.++..|..+.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~ 76 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAK--GGAKVVIVDRDKAGAERVAGEIG---------DAALAVAADISKEADVDAAVEA 76 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHhC---------CceEEEEecCCCHHHHHHHHHH
Confidence 35788888876552 3344443 37899999999988776665442 4689999998764
Q ss_pred --ccCCCeeEEEEcCC
Q 035593 145 --SLKDGFSGILVDLF 158 (269)
Q Consensus 145 --~~~~~yD~I~~d~~ 158 (269)
...++.|+++.++-
T Consensus 77 ~~~~~g~id~li~~Ag 92 (261)
T 3n74_A 77 ALSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHhcCCCCEEEECCc
Confidence 11247899998764
No 479
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=87.55 E-value=1.4 Score=38.55 Aligned_cols=70 Identities=13% Similarity=0.050 Sum_probs=44.5
Q ss_pred CCcEEEEcCcc--cHHHHHHHHHCCCceEE-EEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 78 PGPIGILGFGA--GSAARLILDLYPEAVIH-GWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 78 ~~~VL~iG~G~--G~~~~~l~~~~p~~~v~-~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
..+|..||||. ...+..+.+..++.+++ ++|.+++-.+.+.+.++ +. ...|..+.......|+|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~-----------~~-~~~~~~~ll~~~~~D~V~ 80 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTG-----------AR-GHASLTDMLAQTDADIVI 80 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHC-----------CE-EESCHHHHHHHCCCSEEE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcC-----------Cc-eeCCHHHHhcCCCCCEEE
Confidence 56899999993 34455555532678766 67999988777666554 21 234555543345788888
Q ss_pred EcCCC
Q 035593 155 VDLFS 159 (269)
Q Consensus 155 ~d~~~ 159 (269)
+....
T Consensus 81 i~tp~ 85 (354)
T 3q2i_A 81 LTTPS 85 (354)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 75443
No 480
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=87.53 E-value=2.8 Score=34.31 Aligned_cols=75 Identities=7% Similarity=0.023 Sum_probs=50.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.||+.|+++| ++..+++++ .+.+|.+++.+++-.+...+.+... ..++.++..|..+.
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD------GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4677888887544 444444332 3789999999998877665554211 35789999998874
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
...++.|+++.++-
T Consensus 81 ~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11247899998753
No 481
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=87.40 E-value=4.1 Score=33.15 Aligned_cols=71 Identities=11% Similarity=-0.018 Sum_probs=48.3
Q ss_pred CCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----------
Q 035593 78 PGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA----------- 144 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~----------- 144 (269)
.++||+.|+++| +++.+++++ .+.+|.+++.+++-++...+.++ .++.++..|..+.
T Consensus 3 ~k~vlVTGas~G-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~ 72 (235)
T 3l6e_A 3 LGHIIVTGAGSG-LGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---------NAVIGIVADLAHHEDVDVAFAAAV 72 (235)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------CCceEEECCCCCHHHHHHHHHHHH
Confidence 356888887654 444444332 47899999999987776665542 2588999998764
Q ss_pred ccCCCeeEEEEcCC
Q 035593 145 SLKDGFSGILVDLF 158 (269)
Q Consensus 145 ~~~~~yD~I~~d~~ 158 (269)
...++.|+++..+-
T Consensus 73 ~~~g~id~lvnnAg 86 (235)
T 3l6e_A 73 EWGGLPELVLHCAG 86 (235)
T ss_dssp HHHCSCSEEEEECC
T ss_pred HhcCCCcEEEECCC
Confidence 12357899998754
No 482
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.37 E-value=0.75 Score=40.06 Aligned_cols=45 Identities=16% Similarity=0.129 Sum_probs=39.9
Q ss_pred CCCCcEEEEcCcccHHHHHHHHHCCCceEEEEECCh---HHHHHHHHhcC
Q 035593 76 LPPGPIGILGFGAGSAARLILDLYPEAVIHGWELDP---SVIKVAREFFA 122 (269)
Q Consensus 76 ~~~~~VL~iG~G~G~~~~~l~~~~p~~~v~~vEidp---~~~~~a~~~~~ 122 (269)
.+...|||-=||+|+.+.++.+. +.+.+++|++| ..+++|++++.
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHH
Confidence 36788999999999999998885 78999999999 99999999874
No 483
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.27 E-value=2 Score=39.52 Aligned_cols=109 Identities=10% Similarity=-0.022 Sum_probs=61.6
Q ss_pred CCcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC-c--ccccc-C----CCCcEEEEEccccccccC
Q 035593 78 PGPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFA-L--EKLEK-S----YPDRLFVYVGNALKASLK 147 (269)
Q Consensus 78 ~~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~-~--~~~~~-~----~~~rv~~~~~D~~~~~~~ 147 (269)
..+|.+||+| ++.++..+++ .+.+|+++|++++.++..++.-. . +.... . ...++++. .|..+ .-
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~--~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~--a~ 82 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLAD--IGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEA--AV 82 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHH--HH
T ss_pred CceEEEECcCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHH--Hh
Confidence 4589999999 3344555555 36789999999999888776421 0 00000 0 01123321 22211 12
Q ss_pred CCeeEEEEcCCCCCC---CCCCCCcHHHHHHHHhhccCCcEEEEEecC
Q 035593 148 DGFSGILVDLFSKGS---LLSELEDPNTWEKLRQCLRKGGRIMVNVGG 192 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~---~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~ 192 (269)
...|+||+....+.. .+..-...+.++.+...|+++-++ ++..+
T Consensus 83 ~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iV-V~~ST 129 (478)
T 2y0c_A 83 AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVI-VDKST 129 (478)
T ss_dssp HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEE-EECSC
T ss_pred hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEE-EEeCC
Confidence 357999987655321 111123467788888889886554 55543
No 484
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.05 E-value=3.9 Score=37.70 Aligned_cols=98 Identities=16% Similarity=0.112 Sum_probs=60.6
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-ccCCCeeEEEE
Q 035593 79 GPIGILGFG--AGSAARLILDLYPEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-SLKDGFSGILV 155 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-~~~~~yD~I~~ 155 (269)
.+|..||+| +..++..|++ .+.+|++.|.+++.++...+.-. . ..++.. ..+..++ ..-+..|+|++
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~--~G~~V~v~dr~~~~~~~l~~~g~-~------g~~i~~-~~s~~e~v~~l~~aDvVil 74 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMND--HGFVVCAFNRTVSKVDDFLANEA-K------GTKVVG-AQSLKEMVSKLKKPRRIIL 74 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSTHHHHHHHHTTT-T------TSSCEE-CSSHHHHHHTBCSSCEEEE
T ss_pred CEEEEEChhHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHhccc-C------CCceec-cCCHHHHHhhccCCCEEEE
Confidence 579999998 4445555655 36799999999998877665411 0 112221 1233333 22246799998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 156 DLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 156 d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
.+... ....+.++.+...|++|- ++++..+.
T Consensus 75 ~Vp~~------~~v~~vl~~l~~~L~~g~-iIId~st~ 105 (484)
T 4gwg_A 75 LVKAG------QAVDDFIEKLVPLLDTGD-IIIDGGNS 105 (484)
T ss_dssp CSCSS------HHHHHHHHHHGGGCCTTC-EEEECSCC
T ss_pred ecCCh------HHHHHHHHHHHHhcCCCC-EEEEcCCC
Confidence 65432 124578888999998855 55666554
No 485
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=87.01 E-value=4.8 Score=33.62 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=48.2
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+++++ .+.+|.+++.++...+.+++.... ..++.++..|..+.
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (273)
T 3uf0_A 30 AGRTAVVTGAGSG-IGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADG-------GGSAEAVVADLADLEGAANVAEEL 101 (273)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTT-------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhc-------CCcEEEEEecCCCHHHHHHHHHHH
Confidence 4678888887655 443333332 478999999776655555443221 35789999998865
Q ss_pred ccCCCeeEEEEcCC
Q 035593 145 SLKDGFSGILVDLF 158 (269)
Q Consensus 145 ~~~~~yD~I~~d~~ 158 (269)
...++.|+++.++-
T Consensus 102 ~~~g~iD~lv~nAg 115 (273)
T 3uf0_A 102 AATRRVDVLVNNAG 115 (273)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCcEEEECCC
Confidence 11257899998754
No 486
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=86.92 E-value=0.73 Score=41.32 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=35.1
Q ss_pred CCcEEEEcCcccHHHHHHHHHC-------CCceEEEEECChHHHHHHHHhc
Q 035593 78 PGPIGILGFGAGSAARLILDLY-------PEAVIHGWELDPSVIKVAREFF 121 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~~l~~~~-------p~~~v~~vEidp~~~~~a~~~~ 121 (269)
+-.|+++|.|.|.++.-+++.. ...++..||+||...+.=++.+
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 4579999999999998887642 2458999999999987666554
No 487
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=86.90 E-value=3.6 Score=33.77 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=49.0
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+.+.+ .+.+|.+++.+++-.+...+.++ .++.++..|..+.
T Consensus 5 ~gk~vlVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~ 74 (247)
T 3rwb_A 5 AGKTALVTGAAQG-IGKAIAARLAADGATVIVSDINAEGAKAAAASIG---------KKARAIAADISDPGSVKALFAEI 74 (247)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---------TTEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CceEEEEcCCCCHHHHHHHHHHH
Confidence 3567888887654 444443332 47899999999987776655542 4688888998764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
...++.|+++.++-
T Consensus 75 ~~~~g~id~lv~nAg 89 (247)
T 3rwb_A 75 QALTGGIDILVNNAS 89 (247)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHCCCCCEEEECCC
Confidence 11247899998754
No 488
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=86.80 E-value=4.3 Score=33.91 Aligned_cols=76 Identities=11% Similarity=-0.085 Sum_probs=49.6
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+++++ .+.+|.+++.+++-.+.+.+.+.... ..++.++..|..+.
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 26 RDKVAFITGGGSG-IGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-----GRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-----SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4678888887654 444444432 47899999999876655544332111 35789999998764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 100 ~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 100 LKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 12257899998764
No 489
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=86.75 E-value=6.1 Score=32.30 Aligned_cols=75 Identities=8% Similarity=-0.022 Sum_probs=48.8
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+.+.+ .+.+|.+++.+++-++...+.+... ..++.++..|..+.
T Consensus 6 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 6 QGKVALITGASSG-IGEATARALAAEGAAVAIAARRVEKLRALGDELTAA------GAKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 3567888886544 444444332 3789999999987766554443211 24688999998764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 79 ~~~~g~id~lv~nAg 93 (247)
T 2jah_A 79 VEALGGLDILVNNAG 93 (247)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 01247899998753
No 490
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=86.68 E-value=2.7 Score=35.26 Aligned_cols=75 Identities=11% Similarity=0.018 Sum_probs=49.7
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+++|+.|+++| +++.+++++ .+.+|.+++.+++-.+...+.+... ..++.++..|..+.
T Consensus 31 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 31 SGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV------GGKALPIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT------TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4678888887654 444443332 3789999999987766655544211 35788899998864
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 104 ~~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 104 TGELGGIDIAVCNAG 118 (276)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11247999998754
No 491
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=86.57 E-value=4.2 Score=35.02 Aligned_cols=88 Identities=15% Similarity=0.172 Sum_probs=51.8
Q ss_pred CcEEEEcCc--ccHHHHHHHHHCCC-ceEEEEECCh-------HHHHHHHHhcCccccccCCCCcEEEEEc-cccccccC
Q 035593 79 GPIGILGFG--AGSAARLILDLYPE-AVIHGWELDP-------SVIKVAREFFALEKLEKSYPDRLFVYVG-NALKASLK 147 (269)
Q Consensus 79 ~~VL~iG~G--~G~~~~~l~~~~p~-~~v~~vEidp-------~~~~~a~~~~~~~~~~~~~~~rv~~~~~-D~~~~~~~ 147 (269)
.+|..||+| +..++..|++ .+ .+|+++|.++ +..+.+.+. .+ .. +..+. -
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~--~G~~~V~~~dr~~~~~~~~~~~~~~~~~~------------g~---~~~s~~e~--~ 85 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGG--RNAARLAAYDLRFNDPAASGALRARAAEL------------GV---EPLDDVAG--I 85 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TTCSEEEEECGGGGCTTTHHHHHHHHHHT------------TC---EEESSGGG--G
T ss_pred CeEEEECccHHHHHHHHHHHH--cCCCeEEEEeCCCccccchHHHHHHHHHC------------CC---CCCCHHHH--H
Confidence 479999988 3344455554 35 7999999998 333332221 12 22 22222 2
Q ss_pred CCeeEEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEecCC
Q 035593 148 DGFSGILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVGGS 193 (269)
Q Consensus 148 ~~yD~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~~~ 193 (269)
...|+|++.+.... ..+.++.+...|+++. ++++..+.
T Consensus 86 ~~aDvVi~avp~~~-------~~~~~~~i~~~l~~~~-ivv~~st~ 123 (317)
T 4ezb_A 86 ACADVVLSLVVGAA-------TKAVAASAAPHLSDEA-VFIDLNSV 123 (317)
T ss_dssp GGCSEEEECCCGGG-------HHHHHHHHGGGCCTTC-EEEECCSC
T ss_pred hcCCEEEEecCCHH-------HHHHHHHHHhhcCCCC-EEEECCCC
Confidence 35799998654321 2455678888888865 45565443
No 492
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=86.41 E-value=4 Score=35.53 Aligned_cols=70 Identities=6% Similarity=0.009 Sum_probs=42.2
Q ss_pred CCcEEEEcCccc--HHHHHHHHHCCCceEE-EEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 78 PGPIGILGFGAG--SAARLILDLYPEAVIH-GWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 78 ~~~VL~iG~G~G--~~~~~l~~~~p~~~v~-~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
+.+|..||||.- ..+..+. ..|+.+++ ++|.+++..+...+.++.+ . ..|..+.......|+|+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~-~~~~~~lvav~d~~~~~~~~~~~~~g~~-----------~-~~~~~~~l~~~~~D~V~ 71 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYT-KSEKLKLVTCYSRTEDKREKFGKRYNCA-----------G-DATMEALLAREDVEMVI 71 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHT-TCSSEEEEEEECSSHHHHHHHHHHHTCC-----------C-CSSHHHHHHCSSCCEEE
T ss_pred cceEEEEccCHHHHHHHHHHH-hCCCcEEEEEECCCHHHHHHHHHHcCCC-----------C-cCCHHHHhcCCCCCEEE
Confidence 458999999842 2223332 24677766 5699998877665555432 1 23444443345788888
Q ss_pred EcCCCC
Q 035593 155 VDLFSK 160 (269)
Q Consensus 155 ~d~~~~ 160 (269)
+.....
T Consensus 72 i~tp~~ 77 (354)
T 3db2_A 72 ITVPND 77 (354)
T ss_dssp ECSCTT
T ss_pred EeCChH
Confidence 765443
No 493
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.33 E-value=7.4 Score=31.88 Aligned_cols=76 Identities=12% Similarity=0.028 Sum_probs=49.1
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEccc--ccc--------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNA--LKA-------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~--~~~-------- 144 (269)
..+.||+.|+++| ++..+++++ .+.+|.+++.+++-++...+.+.... ..++.++..|. .+.
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-----GRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-----CCCceEEEEecccCCHHHHHHHHH
Confidence 4678888887654 444444332 47899999999987766555442111 23678888888 432
Q ss_pred ---ccCCCeeEEEEcCC
Q 035593 145 ---SLKDGFSGILVDLF 158 (269)
Q Consensus 145 ---~~~~~yD~I~~d~~ 158 (269)
...++.|+++.++-
T Consensus 85 ~~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHHCSCCSEEEECCC
T ss_pred HHHHhCCCCCEEEECCc
Confidence 12357999998764
No 494
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.25 E-value=2.2 Score=37.55 Aligned_cols=99 Identities=18% Similarity=0.252 Sum_probs=58.5
Q ss_pred CCcEEEEcCcc--cHHHHHHHHHCCCceEEEEECChHHHHHHHHhcC----ccccccCCCCcEEEEEccccccccCCCee
Q 035593 78 PGPIGILGFGA--GSAARLILDLYPEAVIHGWELDPSVIKVAREFFA----LEKLEKSYPDRLFVYVGNALKASLKDGFS 151 (269)
Q Consensus 78 ~~~VL~iG~G~--G~~~~~l~~~~p~~~v~~vEidp~~~~~a~~~~~----~~~~~~~~~~rv~~~~~D~~~~~~~~~yD 151 (269)
..+|..||+|. +.++..|++ .+.+|+.++.+++.++..++.-. ++... ..+++++. .|..+ .-...|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~--~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t-~d~~e--a~~~aD 101 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR--KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAY-CDLKA--SLEGVT 101 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT--TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEE-SCHHH--HHTTCC
T ss_pred CCeEEEECccHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEE-CCHHH--HHhcCC
Confidence 45899999983 344445544 35689999999998877665421 11100 01233322 22221 124689
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHhhccCCcEEEEEec
Q 035593 152 GILVDLFSKGSLLSELEDPNTWEKLRQCLRKGGRIMVNVG 191 (269)
Q Consensus 152 ~I~~d~~~~~~~~~~l~~~e~~~~~~~~L~pgG~l~~~~~ 191 (269)
+|++..... ...+.++.+...|+++-++ +++.
T Consensus 102 vVilaVp~~-------~~~~vl~~i~~~l~~~~iv-vs~~ 133 (356)
T 3k96_A 102 DILIVVPSF-------AFHEVITRMKPLIDAKTRI-AWGT 133 (356)
T ss_dssp EEEECCCHH-------HHHHHHHHHGGGCCTTCEE-EECC
T ss_pred EEEECCCHH-------HHHHHHHHHHHhcCCCCEE-EEEe
Confidence 999854321 2568888888888886654 4443
No 495
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=86.18 E-value=2.6 Score=36.51 Aligned_cols=69 Identities=16% Similarity=0.042 Sum_probs=42.9
Q ss_pred CCcEEEEcCcc--cHHHHHHHHHCCCceEE-EEECChHHHHHHHHhcCccccccCCCCcEEEEEccccccccCCCeeEEE
Q 035593 78 PGPIGILGFGA--GSAARLILDLYPEAVIH-GWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKASLKDGFSGIL 154 (269)
Q Consensus 78 ~~~VL~iG~G~--G~~~~~l~~~~p~~~v~-~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~~~~~~yD~I~ 154 (269)
..+|..||||. ...+..+.+ .|+.+++ ++|.+++..+...+.++ +. ...|..+.......|+|+
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~-~~~~~l~av~d~~~~~~~~~a~~~g-----------~~-~~~~~~~~l~~~~~D~V~ 70 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAA-NPDLELVVIADPFIEGAQRLAEANG-----------AE-AVASPDEVFARDDIDGIV 70 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-CTTEEEEEEECSSHHHHHHHHHTTT-----------CE-EESSHHHHTTCSCCCEEE
T ss_pred ceEEEEECCcHHHHHHHHHHHh-CCCcEEEEEECCCHHHHHHHHHHcC-----------Cc-eeCCHHHHhcCCCCCEEE
Confidence 34899999984 233344443 5788877 68999988776555443 12 124544444445788888
Q ss_pred EcCCC
Q 035593 155 VDLFS 159 (269)
Q Consensus 155 ~d~~~ 159 (269)
+....
T Consensus 71 i~tp~ 75 (344)
T 3euw_A 71 IGSPT 75 (344)
T ss_dssp ECSCG
T ss_pred EeCCc
Confidence 75543
No 496
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=86.02 E-value=6.1 Score=33.41 Aligned_cols=72 Identities=10% Similarity=-0.035 Sum_probs=50.4
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+-|++.| +++.+++.+ .+++|..++.+++.++.+.+.++ .++..+..|..+.
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g---------~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG---------GGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---------CCeEEEEecCCCHHHHHHHHHHH
Confidence 5677787787655 444444433 48899999999998887766553 3567788898764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 98 ~~~~G~iDiLVNNAG 112 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAG 112 (273)
T ss_dssp HHHHSCEEEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 12467899998764
No 497
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=85.98 E-value=6.5 Score=32.24 Aligned_cols=73 Identities=11% Similarity=0.008 Sum_probs=47.0
Q ss_pred CcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc-----------c
Q 035593 79 GPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA-----------S 145 (269)
Q Consensus 79 ~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~-----------~ 145 (269)
+.+|+.|+++| +++.+.+++ .+.+|.+++.+++-.+...+.+... ..++.++..|..+. .
T Consensus 3 k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 3 KVALVTGAGQG-IGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA------GGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 56888886544 444444432 3789999999987665544433211 24688899998764 1
Q ss_pred cCCCeeEEEEcCC
Q 035593 146 LKDGFSGILVDLF 158 (269)
Q Consensus 146 ~~~~yD~I~~d~~ 158 (269)
.-++.|+++..+-
T Consensus 76 ~~g~id~lv~nAg 88 (256)
T 1geg_A 76 TLGGFDVIVNNAG 88 (256)
T ss_dssp HTTCCCEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1247999998753
No 498
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.90 E-value=9.6 Score=32.41 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=24.4
Q ss_pred CCcEEEEcCcc--cHHHHHHHHHCCCc--eEEEEECChHHHH
Q 035593 78 PGPIGILGFGA--GSAARLILDLYPEA--VIHGWELDPSVIK 115 (269)
Q Consensus 78 ~~~VL~iG~G~--G~~~~~l~~~~p~~--~v~~vEidp~~~~ 115 (269)
+.+|.+||+|. +.++..|++ .+. +|+.+|++++.++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~--~g~~~~V~l~d~~~~~~~ 46 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ--RGIAREIVLEDIAKERVE 46 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCChhHHH
Confidence 45899999973 233334433 244 8999999987665
No 499
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=85.90 E-value=0.65 Score=41.13 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=27.3
Q ss_pred CCcEEEEcCcccHHHH--HHHHHCCCceEEEEECCh
Q 035593 78 PGPIGILGFGAGSAAR--LILDLYPEAVIHGWELDP 111 (269)
Q Consensus 78 ~~~VL~iG~G~G~~~~--~l~~~~p~~~v~~vEidp 111 (269)
.+||++||+|.+.++. .|++..++.+|+.||.++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 5799999999876654 466666788999999875
No 500
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=85.71 E-value=4.5 Score=33.16 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=48.4
Q ss_pred CCCcEEEEcCcccHHHHHHHHHC--CCceEEEEECChHHHHHHHHhcCccccccCCCCcEEEEEcccccc----------
Q 035593 77 PPGPIGILGFGAGSAARLILDLY--PEAVIHGWELDPSVIKVAREFFALEKLEKSYPDRLFVYVGNALKA---------- 144 (269)
Q Consensus 77 ~~~~VL~iG~G~G~~~~~l~~~~--p~~~v~~vEidp~~~~~a~~~~~~~~~~~~~~~rv~~~~~D~~~~---------- 144 (269)
..+.+|+.|+++| +++.+++++ .+.+|.+++.+++-.+...+.++ .+...+..|..+.
T Consensus 8 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~ 77 (248)
T 3op4_A 8 EGKVALVTGASRG-IGKAIAELLAERGAKVIGTATSESGAQAISDYLG---------DNGKGMALNVTNPESIEAVLKAI 77 (248)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------ccceEEEEeCCCHHHHHHHHHHH
Confidence 4567888876644 444444332 47899999999988776665543 2467888888764
Q ss_pred -ccCCCeeEEEEcCC
Q 035593 145 -SLKDGFSGILVDLF 158 (269)
Q Consensus 145 -~~~~~yD~I~~d~~ 158 (269)
..-++.|+++.++-
T Consensus 78 ~~~~g~iD~lv~nAg 92 (248)
T 3op4_A 78 TDEFGGVDILVNNAG 92 (248)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11247899998754
Done!