BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035598
(298 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HVQ|A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein
With Chitinase And Lysozyme Activity, And Its Complex
With An Inhibitor
pdb|1LLO|A Chain A, Hevamine A (A Plant EndochitinaseLYSOZYME) COMPLEXED WITH
Allosamidin
pdb|2HVM|A Chain A, Hevamine A At 1.8 Angstrom Resolution
Length = 273
Score = 355 bits (912), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/273 (65%), Positives = 215/273 (78%)
Query: 26 GGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGL 85
GGIAIYWGQNGNEGTL +TCST Y YV ++FL FGNGQTP INLAGHC+P + GCT +
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 86 SSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLD 145
S+ I+SCQ +G+KV+LSLGG GSY+L S DAK VA YLWNNFLGG SSSRPLG AVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 146 GIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWV 205
GID DIE G++ +WD+LAR+L+ YS++GKKVY+TAAPQCPFPD ++G AL TG+FDYVWV
Sbjct: 121 GIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 206 QFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXXIPTADLISKVL 265
QFYNNPPCQYSSGNI N++N+W +WT+ I A KI +P LIS++L
Sbjct: 181 QFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL 240
Query: 266 PAIKGSAKYGGVMLWSKYYDDQSGYSSSIKSHV 298
P IK S KYGGVMLWSK+YDD++GYSSSI V
Sbjct: 241 PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>pdb|1KR0|A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag
Length = 273
Score = 351 bits (901), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 178/273 (65%), Positives = 214/273 (78%)
Query: 26 GGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGL 85
GGIAIYWGQNGNEGTL +TCST Y YV ++FL FGNGQTP INLAGHC+P + GCT +
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 86 SSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLD 145
S+ I+SCQ +G+KV+LSLGG GSY+L S DAK VA YLWNNFLGG SSSRPLG AVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 146 GIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWV 205
GID IE G++ +WD+LAR+L+ YS++GKKVY+TAAPQCPFPD ++G AL TG+FDYVWV
Sbjct: 121 GIDFAIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 206 QFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXXIPTADLISKVL 265
QF+NNPPCQYSSGNI N++N+W +WT+ I A KI +P LIS++L
Sbjct: 181 QFFNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL 240
Query: 266 PAIKGSAKYGGVMLWSKYYDDQSGYSSSIKSHV 298
P IK S KYGGVMLWSK+YDD++GYSSSI V
Sbjct: 241 PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>pdb|1KR1|A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag
Length = 273
Score = 350 bits (899), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 178/273 (65%), Positives = 213/273 (78%)
Query: 26 GGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGL 85
GGIAIYWGQNGNEGTL +TCST Y YV ++FL FGNGQTP INLAGHC+P + GCT +
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 86 SSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLD 145
S+ I+SCQ +G+KV+LSLGG GSY+L S DAK VA YLWNNFLGG SSSRPLG AVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 146 GIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWV 205
GID I G++ +WD+LAR+L+ YS++GKKVY+TAAPQCPFPD ++G AL TG+FDYVWV
Sbjct: 121 GIDFAIAHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 206 QFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXXIPTADLISKVL 265
QFYNNPPCQYSSGNI N++N+W +WT+ I A KI +P LIS++L
Sbjct: 181 QFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL 240
Query: 266 PAIKGSAKYGGVMLWSKYYDDQSGYSSSIKSHV 298
P IK S KYGGVMLWSK+YDD++GYSSSI V
Sbjct: 241 PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>pdb|1KQY|A Chain A, Hevamine Mutant D125aE127AY183F IN COMPLEX WITH PENTA-Nag
pdb|1KQZ|A Chain A, Hevamine Mutant D125aE127AY183F IN COMPLEX WITH TETRA-Nag
Length = 273
Score = 349 bits (895), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/273 (64%), Positives = 213/273 (78%)
Query: 26 GGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGL 85
GGIAIYWGQNGNEGTL +TCST Y YV ++FL FGNGQTP INLAGHC+P + GCT +
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 86 SSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLD 145
S+ I+SCQ +G+KV+LSLGG GSY+L S DAK VA YLWNNFLGG SSSRPLG AVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 146 GIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWV 205
GID I G++ +WD+LAR+L+ YS++GKKVY+TAAPQCPFPD ++G AL TG+FDYVWV
Sbjct: 121 GIDFAIAHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 206 QFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXXIPTADLISKVL 265
QF+NNPPCQYSSGNI N++N+W +WT+ I A KI +P LIS++L
Sbjct: 181 QFFNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL 240
Query: 266 PAIKGSAKYGGVMLWSKYYDDQSGYSSSIKSHV 298
P IK S KYGGVMLWSK+YDD++GYSSSI V
Sbjct: 241 PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>pdb|2GSJ|A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of
Ppl2, A Novel Chimerolectin From Parkia Platycephala
Seeds Exhibiting Endochitinolytic Activity
Length = 271
Score = 321 bits (822), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 197/273 (72%), Gaps = 2/273 (0%)
Query: 26 GGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGL 85
GGI +YWGQNG EGTL TC +G Y+ V ++FL+ FG G+ P INLAGHCDP +NGC +
Sbjct: 1 GGIVVYWGQNGGEGTLTSTCESGLYQIVNIAFLSQFGGGRRPQINLAGHCDPANNGCRTV 60
Query: 86 SSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLD 145
S I++CQ +G+KV+LS+GG AGSYSL+S QDA+ VA Y+WNNFLGG SSSRPLG AVLD
Sbjct: 61 SDGIRACQRRGIKVMLSIGGGAGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLD 120
Query: 146 GIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWV 205
G+D DIE G + ++D LAR L+ +++ GKKV+++AAPQCPFPD + AL TG+FDYVWV
Sbjct: 121 GVDFDIEHGGA-YYDALARRLSEHNRGGKKVFLSAAPQCPFPDQSLNKALSTGLFDYVWV 179
Query: 206 QFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXXIPTADLISKVL 265
QFYNNP C+++SGN N N+W +WTS A K +P LI++VL
Sbjct: 180 QFYNNPQCEFNSGNPSNFRNSWNKWTSSFNA-KFYVGLPASPEAAGSGYVPPQQLINQVL 238
Query: 266 PAIKGSAKYGGVMLWSKYYDDQSGYSSSIKSHV 298
P +K S KYGGVMLW ++ D ++ YSS IK V
Sbjct: 239 PFVKRSPKYGGVMLWDRFNDLKTKYSSKIKPSV 271
>pdb|3D5H|A Chain A, Crystal Structure Of Haementhin From Haemanthus
Multiflorus At 2.0a Resolution: Formation Of A Novel
Loop On A Tim Barrel Fold And Its Functional
Significance
pdb|3HU7|A Chain A, Structural Characterization And Binding Studies Of A Plant
Pathogenesis Related Protein Heamanthin From Haemanthus
Multiflorus Reveal Its Dual Inhibitory Effects Against
Xylanase And Alpha-Amylase
pdb|3M7S|A Chain A, Crystal Structure Of The Complex Of Xylanase Gh-11 And
Alpha Amylase Inhibitor Protein With Cellobiose At 2.4 A
Resolution
pdb|3OIH|A Chain A, Crystal Structure Of The Complex Of Xylanase-Alpha-Amylase
Inhibitor Protein (Xaip-I) With Trehalose At 1.87 A
Resolution
Length = 272
Score = 251 bits (642), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 163/269 (60%), Gaps = 8/269 (2%)
Query: 28 IAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSS 87
IA+YWGQN +E +L+ TC TGNY YVI+ FL TFG GQTP ++++GH +GL
Sbjct: 5 IAVYWGQNFDERSLEATCDTGNYAYVIIGFLNTFGGGQTPALDISGHSP------SGLEP 58
Query: 88 DIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFL--GGHSSSRPLGPAVLD 145
IK CQ+K VKVLLS+GG G YSL S DA +A YL+NNFL GHS +RP G AVLD
Sbjct: 59 QIKHCQSKNVKVLLSIGGPKGPYSLDSRSDANDLAVYLFNNFLLPPGHSENRPFGNAVLD 118
Query: 146 GIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWV 205
GID IE G + LA L+ + G + +TAAPQC +PD +G + + FD +WV
Sbjct: 119 GIDFHIEHGGPSQYQLLANILSSFRLAGTEFALTAAPQCVYPDPNLGTVINSATFDAIWV 178
Query: 206 QFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXXIPTADLISKVL 265
QFYNNP C YSSGN L+NAW++W+ K+ +P + V
Sbjct: 179 QFYNNPQCSYSSGNAEALMNAWREWSMKARTKKVFLGFPAHPDAAGSGYMPPEKVKFHVF 238
Query: 266 PAIKGSAKYGGVMLWSKYYDDQSGYSSSI 294
PA K S K+GG+MLW Y+D S +SS I
Sbjct: 239 PAAKKSYKFGGIMLWDSYWDTVSNFSSKI 267
>pdb|3O9N|A Chain A, Crystal Structure Of A New Form Of Xylanase-A-Amylase
Inhibitor Protein(Xaip-Iii) At 2.4 A Resolution
Length = 272
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 165/269 (61%), Gaps = 8/269 (2%)
Query: 28 IAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSS 87
IA+YWGQN +E +L+ TC +GNY YVI+ FL TFG GQTP ++++GH +GL
Sbjct: 5 IAVYWGQNFDERSLEATCDSGNYAYVIIGFLNTFGGGQTPALDISGHSP------SGLEP 58
Query: 88 DIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFL--GGHSSSRPLGPAVLD 145
IK CQ+K VKVLLS+GG AG YSL S DA +A YL+NNFL GHS + P G AVLD
Sbjct: 59 QIKHCQSKNVKVLLSIGGPAGPYSLDSRSDANDLAVYLFNNFLLPPGHSENNPFGNAVLD 118
Query: 146 GIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWV 205
GID IE G + LA L+ + KG + +TAAPQC +PD +G + + FD +WV
Sbjct: 119 GIDFHIEHGGPSQYQLLANILSSFRLKGTEFALTAAPQCVYPDPNLGTVINSATFDAIWV 178
Query: 206 QFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXXIPTADLISKVL 265
QFYNNP C YSSGN L+NAW++W+ K+ +P A + V
Sbjct: 179 QFYNNPQCSYSSGNAEALMNAWREWSMKARTKKVFLGFPAHPDAAGSGYMPPAKVKFHVF 238
Query: 266 PAIKGSAKYGGVMLWSKYYDDQSGYSSSI 294
PA K S K+GG+MLW Y+D S +S+ I
Sbjct: 239 PAAKKSYKFGGIMLWDSYWDTVSQFSNKI 267
>pdb|3MU7|A Chain A, Crystal Structure Of The Xylanase And Alpha-Amylase
Inhibitor Protein (Xaip-Ii) From Scadoxus Multiflorus At
1.2 A Resolution
Length = 273
Score = 238 bits (608), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 159/270 (58%), Gaps = 9/270 (3%)
Query: 28 IAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSS 87
IA+YWGQ+ +E +L+ TC +GNY YVI+ FL TFG GQTP ++++GH GL
Sbjct: 5 IAVYWGQSFDERSLEATCDSGNYAYVIIGFLNTFGGGQTPALDISGHSP------KGLEP 58
Query: 88 DIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFL---GGHSSSRPLGPAVL 144
IK CQ+K VKVLLS+GG AG YSL S DA +A YL NFL G S SRP G AVL
Sbjct: 59 QIKHCQSKNVKVLLSIGGPAGPYSLDSRNDANDLAVYLHKNFLLPPAGTSESRPFGNAVL 118
Query: 145 DGIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVW 204
DGID IE G + LA L+ + G + +TAAPQC +PD +G + + FD +W
Sbjct: 119 DGIDFHIEHGGPSQYQLLANILSSFRLSGSEFALTAAPQCVYPDPNLGTVINSATFDAIW 178
Query: 205 VQFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXXIPTADLISKV 264
VQFYNNP C YS+ N L+NAWK+W+ +K+ +P + V
Sbjct: 179 VQFYNNPQCSYSASNASALMNAWKEWSMKARTDKVFLGFPAHPDAAGSGYMPPTKVKFSV 238
Query: 265 LPAIKGSAKYGGVMLWSKYYDDQSGYSSSI 294
P + S K+GG+MLW Y+D S +S+ I
Sbjct: 239 FPNAQDSTKFGGIMLWDSYWDTVSQFSNKI 268
>pdb|1CNV|A Chain A, Crystal Structure Of Concanavalin B At 1.65 A Resolution
Length = 299
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 154/279 (55%), Gaps = 10/279 (3%)
Query: 28 IAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFG-NGQTPMINLAGHCDP-YSNGCTGL 85
IA+YWGQ +G L++TC T NY+ V +SFL FG + P + L G C P N C+ L
Sbjct: 7 IAVYWGQR-EDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFL 65
Query: 86 SSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLD 145
S IK CQ GVKV L+LGG G+YS S AK +A YL FL PLG LD
Sbjct: 66 ESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG-PLGKVALD 124
Query: 146 GIDLDIEGGTSQ-HWDELARFLAGYSQKGKKVYV-TAAPQCPFPDAWIGNALKTGVFDYV 203
GI DI+ + +WD L L + ++ +AAP C PD ++ NA++T FDY+
Sbjct: 125 GIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTRHFDYI 184
Query: 204 WVQFYNNPPCQYSSGNIGNLLNAWKQWTSDI-PANK--IXXXXXXXXXXXXXXXIPTADL 260
+V+FYN+ CQYS+GNI + NAW WT + P +K IP + L
Sbjct: 185 FVRFYNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSAL 244
Query: 261 ISKVLPAIKG-SAKYGGVMLWSKYYDDQSGYSSSIKSHV 298
I +VLP + +Y G+ LW++ D ++GYS++I ++
Sbjct: 245 IGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRYL 283
>pdb|1OM0|A Chain A, Crystal Structure Of Xylanase Inhibitor Protein (Xip-I)
From Wheat
pdb|1TA3|A Chain A, Crystal Structure Of Xylanase (Gh10) In Complex With
Inhibitor (Xip)
pdb|1TE1|A Chain A, Crystal Structure Of Family 11 Xylanase In Complex With
Inhibitor (xip-i)
Length = 274
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 155/281 (55%), Gaps = 18/281 (6%)
Query: 22 GSNAGGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNG 81
G G + ++WG+N EG+L+E C +G Y V +SFL FG ++L+GH
Sbjct: 2 GGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGH------D 55
Query: 82 CTGLSSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSS--RPL 139
+ + +DIK CQ+KGV V LS+GG YSL S + A + +LWN++ GG S RP
Sbjct: 56 LSSVGADIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPF 115
Query: 140 GPAVLDGIDLDIEGGT-SQHWDELARFLAGYSQK---GKKVYVTAAPQCPFPD-AWIGNA 194
G A LDG+DL +E GT + +D LA LA ++ + GK +++TA +C +P A +G A
Sbjct: 116 GDAWLDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRA 175
Query: 195 LKTGVFDYVWVQFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIXXXXXXXXXXXXXXX 254
L TG+F+ V V+ Y + ++ + N+G +W +WT+ PA +
Sbjct: 176 LATGIFERVHVRTYESD--KWCNQNLG-WEGSWDKWTAAYPATRF--YVGLTADDKSHQW 230
Query: 255 IPTADLISKVLPAIKGSAKYGGVMLWSKYYDDQSGYSSSIK 295
+ ++ V P + YGG+MLW +Y+D Q+ YSS IK
Sbjct: 231 VHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIK 271
>pdb|2UY2|A Chain A, Sccts1_apo Crystal Structure
pdb|2UY3|A Chain A, Sccts1_8-Chlorotheophylline Crystal Structure
pdb|2UY4|A Chain A, Sccts1_acetazolamide Crystal Structure
pdb|2UY5|A Chain A, Sccts1_kinetin Crystal Structure
Length = 294
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 138/264 (52%), Gaps = 18/264 (6%)
Query: 28 IAIYWGQN--GNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHC-DPYSNG--- 81
IA+YWGQN G + +L C + + + +LSFL F T +N A C D +S+G
Sbjct: 8 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQF---PTLGLNFANACSDTFSDGLLH 64
Query: 82 CTGLSSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNF-LGGHSSSRPLG 140
CT ++ DI++CQ+ G KVLLSLGGA+GSY + A+ A LW+ F G +S RP
Sbjct: 65 CTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFD 124
Query: 141 PAVLDGIDLDIEGGTSQHWDELA-RFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGV 199
AV+DG D DIE + LA + +++ K+ Y++AAPQCP+PDA +G+ L+
Sbjct: 125 SAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENAD 184
Query: 200 FDYVWVQFYNNPPCQYSSGNIGNLLNAWKQWTSDIPAN---KIXXXXXXXXXXXXXXXIP 256
D+ ++QFYNN Y S + + W + + N K+ I
Sbjct: 185 IDFAFIQFYNN----YCSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAAGSGYIS 240
Query: 257 TADLISKVLPAIKGSAKYGGVMLW 280
L+ + I S+ +GG+ LW
Sbjct: 241 DTSLLESTIADIASSSSFGGIALW 264
>pdb|2XVN|A Chain A, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
pdb|2XVN|B Chain B, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
pdb|2XVN|C Chain C, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
Length = 309
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 28 IAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGN---GQTPMINLAGHCD-------- 76
+AIYWGQ N+ L C + + + + F+ F + G P N CD
Sbjct: 3 LAIYWGQGPNQLRLSHFCQETSLDIINIGFINYFPDMSPGHWPGSNFGNQCDGSVYVTND 62
Query: 77 ----PYSNGCTGLSSDIKSCQAKGVKVLLSLGGA-AGSYSLTSTQDAKQVATYLWNNF-- 129
+GC + DI CQA G KVLLS+GGA S+ S A AT+LW F
Sbjct: 63 GVVTKLLSGCHQIMEDIPICQAAGKKVLLSIGGAYPPDQSILSEDSAVAFATFLWGAFGP 122
Query: 130 -LGGHSSSRPLGPAVLDGIDLDIEGGTSQHWDELARFLAGYSQK--GKKVYVTAAPQCPF 186
G RP G V+DG D DIE + + Y + +K Y++AAPQC
Sbjct: 123 VAEGWEGPRPFGDVVVDGFDFDIEHNGGFGYATMVNTFRQYFNQVPERKFYLSAAPQCII 182
Query: 187 PDAWIGNALKTGVFDYVWVQFYNNPPCQYSS 217
PDA + +A+ FD++W+Q+YN C S
Sbjct: 183 PDAQLSDAIFNAAFDFIWIQYYNTAACSAKS 213
>pdb|2XUC|A Chain A, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XUC|B Chain B, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XUC|C Chain C, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XVP|A Chain A, Chia1 From Aspergillus Fumigatus, Apostructure
pdb|2XVP|B Chain B, Chia1 From Aspergillus Fumigatus, Apostructure
pdb|2XTK|A Chain A, Chia1 From Aspergillus Fumigatus In Complex With
Acetazolamide
pdb|2XTK|B Chain B, Chia1 From Aspergillus Fumigatus In Complex With
Acetazolamide
Length = 310
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 28 IAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGN---GQTPMINLAGHCD-------- 76
+AIYWGQ N+ L C + + + + F+ F + G P N CD
Sbjct: 4 LAIYWGQGPNQLRLSHFCQETSLDIINIGFINYFPDMSPGHWPGSNFGNQCDGSVYVTND 63
Query: 77 ----PYSNGCTGLSSDIKSCQAKGVKVLLSLGGA-AGSYSLTSTQDAKQVATYLWNNF-- 129
+GC + DI CQA G KVLLS+GGA S+ S A AT+LW F
Sbjct: 64 GVVTKLLSGCHQIMEDIPICQAAGKKVLLSIGGAYPPDQSILSEDSAVAFATFLWGAFGP 123
Query: 130 -LGGHSSSRPLGPAVLDGIDLDIEGGTSQHWDELARFLAGYSQK--GKKVYVTAAPQCPF 186
G RP G V+DG D DIE + + Y + +K Y++AAPQC
Sbjct: 124 VAEGWEGPRPFGDVVVDGFDFDIEHNGGFGYATMVNTFRQYFNQVPERKFYLSAAPQCII 183
Query: 187 PDAWIGNALKTGVFDYVWVQFYNNPPCQYSS 217
PDA + +A+ FD++W+Q+YN C S
Sbjct: 184 PDAQLSDAIFNAAFDFIWIQYYNTAACSAKS 214
>pdb|3IAN|A Chain A, Crystal Structure Of A Chitinase From Lactococcus Lactis
Subsp. Lactis
Length = 321
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 32/173 (18%)
Query: 50 YEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSSDIKSCQAKGVKVLLSLGGAAGS 109
Y + +SF+ +TP PY+ T ++I A+G VL++LGGA
Sbjct: 39 YNVINVSFM------KTPEGQTLPTFKPYNKTDTEFRAEISKLNAEGKSVLIALGGADAH 92
Query: 110 YSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLDGIDLDIEGGTSQHWDE-------L 162
L +Q++ V + R + DG+D+D+E + D L
Sbjct: 93 IELKKSQESDFVNEII-----------RLVDTYGFDGLDIDLEQAAIEAADNQTVIPSAL 141
Query: 163 ARFLAGYSQKGKKVYVTAAPQCPFPDA------WIGNALKTGVFDYVWVQFYN 209
+ Y + GK +T AP+ P+ + +I N +D++ Q+YN
Sbjct: 142 KKVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNL--DSYYDFINPQYYN 192
>pdb|3EBV|A Chain A, Crystal Structure Of Putative Chitinase A From
Streptomyces Coelicolor
Length = 302
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 85 LSSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVL 144
+D+++ QA G KV++S+GG G+ S+ S+ A A ++ S R G
Sbjct: 64 FKADVRAKQAAGKKVIISVGGEKGTVSVNSSASATNFANSVY-------SVXREYG---F 113
Query: 145 DGIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTG-----V 199
DG+D+D+E G + + A A ++ G +T APQ + G +T +
Sbjct: 114 DGVDIDLENGLNPTYXTQA-LRALSAKAGPDXILTXAPQTIDXQSTQGGYFQTALNVKDI 172
Query: 200 FDYVWVQFYNN 210
V Q+YN+
Sbjct: 173 LTVVNXQYYNS 183
>pdb|4AXN|A Chain A, Hallmarks Of Processive And Non-Processive Glycoside
Hydrolases Revealed From Computational And
Crystallographic Studies Of The Serratia Marcescens
Chitinases
pdb|4AXN|B Chain B, Hallmarks Of Processive And Non-Processive Glycoside
Hydrolases Revealed From Computational And
Crystallographic Studies Of The Serratia Marcescens
Chitinases
Length = 328
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 30/170 (17%)
Query: 77 PYSNGCTGLSSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSS 136
PY+ T + ++G VL+SLGGA L + + K +
Sbjct: 77 PYNLSDTEFRRQVGVLNSQGRAVLISLGGADAHIELKTGDEDKLKDEII----------- 125
Query: 137 RPLGPAVLDGIDLDIEGGTSQHWDE-------LARFLAGYSQKGKKVYVTAAPQCPFPDA 189
R + DG+D+D+E + L + Y+ +GK ++ AP+ P+
Sbjct: 126 RLVEVYGFDGLDIDLEQAAIGAANNKTVLPAALKKVKDHYAAQGKNFIISMAPEFPYLRT 185
Query: 190 ------WIGNALKTGVFDYVWVQFYNNPPCQYSSGNIGNLLNAWKQWTSD 233
+I NAL+ G +D++ Q+YN Q G + LNAW +D
Sbjct: 186 NGTYLDYI-NALE-GYYDFIAPQYYN----QGGDGIWVDELNAWITQNND 229
>pdb|2ZOV|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form I)
Length = 210
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 50 YEYVILSFLATFGNGQTPMINLAGHCD--PYSNGCTGLSS-DIKSCQAKGVKVLLSLGG 105
Y IL +A NG I+LAGH D PY+NG G S+ ++ + +A + L GG
Sbjct: 85 YXRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGG 143
>pdb|4AC1|X Chain X, The Structure Of A Fungal
Endo-Beta-N-Acetylglucosaminidase From Glycosyl
Hydrolase Family 18, At 1.3a Resolution
Length = 283
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 91 SCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLDGIDLD 150
+ + GVKV+ +GGAA T T D+ AT+ ++ G + + L+G+DLD
Sbjct: 70 TMKQAGVKVMGMVGGAAPGSFNTQTLDSPDSATF--EHYYGQLRDA--IVNFQLEGMDLD 125
Query: 151 IEGGTSQH-WDEL-ARFLAGYSQKGKKVYVTAAP 182
+E SQ D L AR A + G +T AP
Sbjct: 126 VEQPMSQQGIDRLIARLRADF---GPDFLITLAP 156
>pdb|2ZVY|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Ii)
pdb|2ZVY|B Chain B, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Ii)
pdb|2ZVZ|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Iii)
pdb|2ZVZ|B Chain B, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Iii)
Length = 183
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 50 YEYVILSFLATFGNGQTPMINLAGHCD--PYSNGCTGLSS-DIKSCQAKGVKVLLSLGG 105
Y IL +A NG I+LAGH D PY+NG G S+ ++ + +A + L GG
Sbjct: 74 YMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGG 132
>pdb|3N11|A Chain A, Crystal Stricture Of Wild-Type Chitinase From Bacillus
Cereus Nctu2
pdb|3N12|A Chain A, Crystal Stricture Of Chitinase In Complex With Zinc Atoms
From Bacillus Cereus Nctu2
Length = 333
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 31 YWGQNGN-EGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSSDI 89
YW N G +K + ++ + +SF T G+ T P SDI
Sbjct: 12 YWHNFDNGTGIIKLKDVSPKWDVINVSFGETGGDRSTV------EFSPVYGTDADFKSDI 65
Query: 90 KSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLDGIDL 149
++KG KV+LS+GG G L + +S + DGID+
Sbjct: 66 SYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFI----------NSIQSLIDKYGFDGIDI 115
Query: 150 DIEGG 154
D+E G
Sbjct: 116 DLESG 120
>pdb|3N15|A Chain A, Crystal Stricture Of E145q Chitinase In Complex With Nag
From Bacillus Cereus Nctu2
Length = 333
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 31 YWGQNGN-EGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSSDI 89
YW N G +K + ++ + +SF T G+ T P SDI
Sbjct: 12 YWHNFDNGTGIIKLKDVSPKWDVINVSFGETGGDRSTV------EFSPVYGTDADFKSDI 65
Query: 90 KSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLDGIDL 149
++KG KV+LS+GG G L + +S + DGID+
Sbjct: 66 SYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFI----------NSIQSLIDKYGFDGIDI 115
Query: 150 DIEGG 154
D++ G
Sbjct: 116 DLQSG 120
>pdb|3N17|A Chain A, Crystal Stricture Of E145qY227F CHITINASE IN COMPLEX WITH
NAG FROM Bacillus Cereus Nctu2
Length = 333
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 31 YWGQNGN-EGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSSDI 89
YW N G +K + ++ + +SF T G+ T P SDI
Sbjct: 12 YWHNFDNGTGIIKLKDVSPKWDVINVSFGETGGDRSTV------EFSPVYGTDADFKSDI 65
Query: 90 KSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLDGIDL 149
++KG KV+LS+GG G L + +S + DGID+
Sbjct: 66 SYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFI----------NSIQSLIDKYGFDGIDI 115
Query: 150 DIEGG 154
D++ G
Sbjct: 116 DLQSG 120
>pdb|4EEI|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From
Francisella Tularensis Complexed With Amp And Succinate
pdb|4EEI|B Chain B, Crystal Structure Of Adenylosuccinate Lyase From
Francisella Tularensis Complexed With Amp And Succinate
Length = 438
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 88 DIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYL 125
D+K Q G+ V S GA G+Y + +T+D K+ A L
Sbjct: 167 DLKDFQKDGLTVQFS--GAVGNYCILTTEDEKKAADIL 202
>pdb|2Y8V|A Chain A, Structure Of Chitinase, Chic, From Aspergillus Fumigatus.
pdb|2Y8V|B Chain B, Structure Of Chitinase, Chic, From Aspergillus Fumigatus.
pdb|2Y8V|C Chain C, Structure Of Chitinase, Chic, From Aspergillus Fumigatus.
pdb|2Y8V|D Chain D, Structure Of Chitinase, Chic, From Aspergillus Fumigatus
Length = 290
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 85 LSSDIKSCQAKGVKVLLSLGGAA-GSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAV 143
L +++ + GVKV+ LGGAA GSY K Y +PL V
Sbjct: 74 LWAEVPVLKRSGVKVMGMLGGAAQGSYRCLDGDQEKFERYY------------QPLLAMV 121
Query: 144 ----LDGIDLDIEGGTS 156
LDG+DLD+E S
Sbjct: 122 RRHQLDGLDLDVEEEMS 138
>pdb|1EDT|A Chain A, Crystal Structure Of Endo-Beta-N-Acetylglucosaminidase H
At 1.9 Angstroms Resolution: Active Site Geometry And
Substrate Recognition
Length = 271
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 45/145 (31%)
Query: 87 SDIKSCQAKGVKVLLSLGG---AAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAV 143
+ I+ Q +G+KVLLS+ G AG + S Q A A L S +
Sbjct: 74 TQIRPLQQQGIKVLLSVLGNHQGAGFANFPSQQAASAFAKQL----------SDAVAKYG 123
Query: 144 LDGIDLDIE------GGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWI------ 191
LDG+D D E GT+Q D V++ A + PD I
Sbjct: 124 LDGVDFDDEYAEYGNNGTAQPNDS------------SFVHLVTALRANMPDKIISLYNIG 171
Query: 192 --------GNALKTGVFDYVWVQFY 208
G + FDY W +Y
Sbjct: 172 PAASRLSYGGVDVSDKFDYAWNPYY 196
>pdb|3D0C|A Chain A, Crystal Structure Of Dihydrodipicolinate Synthase From
Oceanobacillus Iheyensis At 1.9 A Resolution
pdb|3D0C|B Chain B, Crystal Structure Of Dihydrodipicolinate Synthase From
Oceanobacillus Iheyensis At 1.9 A Resolution
Length = 314
Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 84 GLSSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAV 143
GL +++ G++V++ G Y+LT ++AKQVAT + G + +G +V
Sbjct: 34 GLDDNVEFLLQNGIEVIVPNGNTGEFYALT-IEEAKQVATRVTELVNGRATVVAGIGYSV 92
Query: 144 LDGIDL 149
I+L
Sbjct: 93 DTAIEL 98
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,342,282
Number of Sequences: 62578
Number of extensions: 391764
Number of successful extensions: 824
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 773
Number of HSP's gapped (non-prelim): 33
length of query: 298
length of database: 14,973,337
effective HSP length: 98
effective length of query: 200
effective length of database: 8,840,693
effective search space: 1768138600
effective search space used: 1768138600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)