Citrus Sinensis ID: 035598

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MAFRTAISLSFISSLLLMLATGSNAGGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLDGIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWVQFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIFLGLPASPAAAGSGFIPTADLISKVLPAIKGSAKYGGVMLWSKYYDDQSGYSSSIKSHV
ccHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHcccccccccEEEEcccccccccccccccccccccccccccccHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHHHHHHcccccccccccccccccEEEEcccccccHHHHHHHHHHHHHcccccEEEEEcccccccccccHHHHHccccccEEEEEECcccccccccccccHHHHHHHHHHccccccEEEEEcccccccccccccccHHHHHHHHHHHcccccccEEEEEEcccccccccHHHHHccc
****TAISLSFISSLLLMLATGSNAGGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLDGIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWVQFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIFLGLPASPAAAGSGFIPTADLISKVLPAIKGSAKYGGVMLWSKYYDDQSGYS*SIKSH*
xxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAFRTAISLSFISSLLLMLATGSNAGGIAIYWGQNGNEGTLKETCSTGNYEYVILSFLATFGNGQTPMINLAGHCDPYSNGCTGLSSDIKSCQAKGVKVLLSLGGAAGSYSLTSTQDAKQVATYLWNNFLGGHSSSRPLGPAVLDGIDLDIEGGTSQHWDELARFLAGYSQKGKKVYVTAAPQCPFPDAWIGNALKTGVFDYVWVQFYNNPPCQYSSGNIGNLLNAWKQWTSDIPANKIFLGLPASPAAAGSGFIPTADLISKVLPAIKGSAKYGGVMLWSKYYDDQSGYSSSIKSHV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Acidic endochitinase This protein functions as a defense against chitin containing fungal pathogens.probableP19172
Acidic endochitinase SE2 This protein functions as a defense against chitin containing fungal pathogens. This endochitinase also exhibits exochitinase activity, i.e., it is capable of hydrolyzing chito-oligosaccharides, including chitobiose.probableP36910
Basic endochitinase This protein functions as a defense against chitin containing fungal pathogens.probableP29061

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.2.-.-Glycosylases.probable
3.2.1.-Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.probable
3.2.1.14Chitinase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2GSJ, chain A
Confidence level:very confident
Coverage over the Query: 26-298
View the alignment between query and template
View the model in PyMOL