BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035602
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZU9|DERL1_ARATH Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1
Length = 266
Score = 229 bits (584), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 136/205 (66%), Gaps = 42/205 (20%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARYGVQLEK FERRTADFLWMMIF S+ LL LS IP WTPFL
Sbjct: 77 ARYGVQLEKGPFERRTADFLWMMIFGSF----------------TLLVLSVIPFFWTPFL 120
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
GVSLVFMLLY+WSREFP A IS+YGLVTLKAFYLPWAMLALDVIFGSP++P+ LGIIAGH
Sbjct: 121 GVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGH 180
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVAFWRLGHPTNASVQ------------------ 162
LYYFLTVLHPLA G+N L TP+WV+K+VA WR+G P + Q
Sbjct: 181 LYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGAAGPGAGGGVGGG 240
Query: 163 --------PERGAGGAFTGRSYRLN 179
P + AF GRSYRL
Sbjct: 241 GAYSSARAPPESSNTAFRGRSYRLT 265
>sp|Q06397|DERL1_ORYSJ Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2
Length = 242
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 129/181 (71%), Gaps = 18/181 (9%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARYGVQLEK FE+RTADFLWMMIF + LLALSAIP L FL
Sbjct: 77 ARYGVQLEKGAFEKRTADFLWMMIFGAI----------------SLLALSAIPFLDIYFL 120
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
GV +V MLLYVWSRE+P +QIS+YGLV L++FYLPWAML LDVIFGS +LP LGI+ GH
Sbjct: 121 GVPMVSMLLYVWSREYPNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGLLGILVGH 180
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVAFWRLGHPTNASVQPERG--AGGAFTGRSYRL 178
YYFL+VLHPLA G+N L TP WVHK+VA +R+G NA V+P GAF GRSYRL
Sbjct: 181 TYYFLSVLHPLATGKNYLKTPMWVHKIVARFRIGVQANAPVRPAAANTGSGAFRGRSYRL 240
Query: 179 N 179
+
Sbjct: 241 S 241
>sp|Q4G2J5|DER12_MAIZE Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1
Length = 243
Score = 204 bits (518), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 126/182 (69%), Gaps = 19/182 (10%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARYGV LEK F++RTADFLWMMIF + LL LS IP L T L
Sbjct: 77 ARYGVMLEKGAFDKRTADFLWMMIFGAI----------------SLLVLSVIPQLNTYVL 120
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
G+ +V ML+YVWSRE P AQI+IYG++ LKAFYLPW ML LDVIFGSPL+P LGI+ GH
Sbjct: 121 GLPMVSMLVYVWSRENPNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGLLGIMVGH 180
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVAFWRLGHPTNASVQ-PERGAG--GAFTGRSYR 177
LYY+ VLHPLA G+N L TP+WVHK+VA +R+G NA V+ P G GAF GRSYR
Sbjct: 181 LYYYFAVLHPLATGKNYLKTPKWVHKIVARFRIGMQANAPVRAPANGNAGTGAFRGRSYR 240
Query: 178 LN 179
LN
Sbjct: 241 LN 242
>sp|Q4G2J6|DER11_MAIZE Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2
Length = 243
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 125/182 (68%), Gaps = 19/182 (10%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARYGV LEK F++RTADFLWMMIF + LL LS IP+ + FL
Sbjct: 77 ARYGVMLEKGAFDKRTADFLWMMIFGAI----------------SLLVLSIIPLFNSFFL 120
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
G+ +V MLLYVWSRE P AQI+IYGLV L++FYLPWAML LDVIFGS L+P LGI+ GH
Sbjct: 121 GIPMVSMLLYVWSRENPNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGLLGIMVGH 180
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVAFWRLGHPTNASVQPE---RGAGGAFTGRSYR 177
LYYF VLHPLA G++ L TP+WVHK+VA +R+G N+ V+P G F GRSYR
Sbjct: 181 LYYFFAVLHPLATGKSYLKTPKWVHKIVARFRIGMQANSPVRPPANGNSGSGVFRGRSYR 240
Query: 178 LN 179
LN
Sbjct: 241 LN 242
>sp|Q4G2J4|DER21_MAIZE Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2
Length = 249
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARY LE+++F RTADF +M++F + ++ +SE A FL
Sbjct: 78 ARYCKLLEENSFRGRTADFFYMLLFGATVLTSIVLIGGMIPYISETFA-------RILFL 130
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
SL FM++YVWS+ P +S GL T A YLPW +L ++ GS + LG+IAGH
Sbjct: 131 SNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGH 190
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVAFWR--LGHPTNASVQPERGAGGAF 171
+YYFL ++P GR L TP ++ L A + P NA + GAG F
Sbjct: 191 VYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVAQPPNAGI----GAGARF 239
>sp|Q4G2J3|DER22_MAIZE Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1
Length = 249
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARY LE+++F RTADF +M++F + ++ +SE A FL
Sbjct: 78 ARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFA-------RILFL 130
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
SL FM++YVWS+ P +S GL T A YLPW +L ++ GS + LG+IAGH
Sbjct: 131 SNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGH 190
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVAFWR--LGHPTNASVQPERGAGGAF 171
+YYFL ++P GR L TP ++ L A + P NA + GAG F
Sbjct: 191 VYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVAQPPNAGI----GAGARF 239
>sp|Q851X7|DERL2_ORYSJ Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1
Length = 249
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARY LE+++F RTADF +M++F + ++ +SE A FL
Sbjct: 78 ARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFA-------RILFL 130
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
SL FM++YVWS+ P +S GL T A YLPW +L ++ GS + LG+IAGH
Sbjct: 131 SNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGH 190
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVAFWR--LGHPTNASVQPERGAGGAF 171
+YYFL ++P GR L TP ++ L A + P NA + GAG F
Sbjct: 191 VYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVARPPNAGL----GAGARF 239
>sp|Q8VZ96|DER21_ARATH Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=3
Length = 244
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARY LE+++F +TADFL+M++F + ++ ++ ++ ++ FL
Sbjct: 78 ARYCKLLEENSFRGKTADFLYMLLFGATVLT-------GIVLIGGMIPYLSVSFSKIIFL 130
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
SL FM++YVWS++ P +S GL T A YLPW +L ++ G+ +FLG+IAGH
Sbjct: 131 SNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGMIAGH 190
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVA 149
YYFL ++P R L TP ++ L A
Sbjct: 191 AYYFLAFVYPRMTDRRPLKTPSFLKALFA 219
>sp|Q54NN1|DERL2_DICDI Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3
SV=1
Length = 254
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
R+ LE+S+F R+AD+L+M IF S+++ ++ L + I + FL
Sbjct: 78 VRHSRLLEESSFRGRSADYLFMWIFGSFLLL----------IMDAFLFYTKI-VTKVLFL 126
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
S+ FM++YVWSR P IS GL T A YLPW +L + +F L + LG +AGH
Sbjct: 127 APSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLLGAVAGH 186
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLV 148
YYFL +PL R +L TP ++ L+
Sbjct: 187 AYYFLEDAYPLISNRRLLKTPGFLKNLM 214
>sp|Q9ZS88|DER22_ARATH Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1
Length = 244
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
ARY LE+++F +TADFL+M++F + ++ ++ ++ + FL
Sbjct: 78 ARYCKLLEENSFRGKTADFLYMLLFGASVLT-------GIVLIGGMIPYLSASFAKIIFL 130
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
SL FM++YVWS++ P +S GL T A YLPW +L ++ G+ + LG+IAGH
Sbjct: 131 SNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDLLGMIAGH 190
Query: 121 LYYFLTVLHPLAGGRNILATPRWVHKLVA 149
YYFL ++P R L TP ++ L A
Sbjct: 191 AYYFLAEVYPRMTNRRPLKTPSFLKALFA 219
>sp|Q8BNI4|DERL2_MOUSE Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2
Length = 239
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
RY LE+ +F RTADF++M +F +++ F L +S + FLG
Sbjct: 80 RYCRMLEEGSFRGRTADFVFMFLFGGFLMTLF------------GLFVSLV------FLG 121
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+ ML+YVWSR P +++ +GL+ +A +LPW ++ ++ G+ ++ + LGI GH+
Sbjct: 122 QAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHI 181
Query: 122 YYFLTVLHP-LAGGRNILATPRWVHKLVAFWRLGHPTNASVQPERGAGGAFTGRSYRL 178
Y+FL + P GG IL TP + + F N + PE GG G RL
Sbjct: 182 YFFLEDIFPNQPGGIRILKTPSILRTI--FDTPDEDPNYNPLPEERPGGFAWGEGQRL 237
>sp|Q5RC74|DERL2_PONAB Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1
Length = 239
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
RY LE+ +F RTADF++M +F +++ F L +S + FLG
Sbjct: 80 RYCRMLEEGSFRGRTADFVFMFLFGGFLMTLF------------GLFVSLV------FLG 121
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+ ML+YVWSR P +++ +GL+ +A +LPW ++ ++ G+ ++ + LGI GH+
Sbjct: 122 QAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHI 181
Query: 122 YYFLTVLHP-LAGGRNILATPRWVHKLVAFWRLGHPTNASVQPERGAGGAFTGRSYRL 178
Y+FL + P GG IL TP + + F N + PE GG G RL
Sbjct: 182 YFFLEDVFPNQPGGIRILKTPSILKAI--FDTPDEDPNYNPLPEERPGGFAWGEGQRL 237
>sp|Q9GZP9|DERL2_HUMAN Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1
Length = 239
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
RY LE+ +F RTADF++M +F +++ F L +S + FLG
Sbjct: 80 RYCRMLEEGSFRGRTADFVFMFLFGGFLMTLF------------GLFVSLV------FLG 121
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+ ML+YVWSR P +++ +GL+ +A +LPW ++ ++ G+ ++ + LGI GH+
Sbjct: 122 QAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHI 181
Query: 122 YYFLTVLHP-LAGGRNILATPRWVHKLVAFWRLGHPTNASVQPERGAGGAFTGRSYRL 178
Y+FL + P GG IL TP + + F N + PE GG G RL
Sbjct: 182 YFFLEDVFPNQPGGIRILKTPSILKAI--FDTPDEDPNYNPLPEERPGGFAWGEGQRL 237
>sp|Q9D8K3|DERL3_MOUSE Derlin-3 OS=Mus musculus GN=Derl3 PE=2 SV=1
Length = 228
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 19/141 (13%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
RY LE+ +F R ADF++M +F ++ F F FLG
Sbjct: 80 RYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSLF------------------FLG 121
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+L+ ML+YVWSR P +++ +GL+ +A +LPWA++ ++ G+ ++ + LGI+ GH+
Sbjct: 122 QALMAMLVYVWSRRSPHVRVNFFGLLNFQAPFLPWALMGFSLLLGNSVVTDLLGILVGHI 181
Query: 122 YYFLTVLHP-LAGGRNILATP 141
YYFL + P GG+ +L TP
Sbjct: 182 YYFLEDVFPNQPGGKRLLLTP 202
>sp|Q21997|DERL2_CAEEL Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2
Length = 237
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
RY + LE+ +F R ADF++M +F + L+ LS I + FLG
Sbjct: 78 RYCMMLEEGSFRGRRADFVYMFLFGAV-----------------LMILSGI-FVQILFLG 119
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+ ML+Y+WSR P Q++ +G++T A YLPW +L ++ G+ + +F+GI GH+
Sbjct: 120 QAFTIMLVYIWSRRNPMIQMNFFGVLTFTAPYLPWVLLLFSLLLGNNAVVDFMGIACGHI 179
Query: 122 YYFLTVLHPLAG-GRNILATPRWV 144
Y+FL + P G+ L TP+W+
Sbjct: 180 YFFLEDVFPFQEHGKRFLKTPQWL 203
>sp|Q96Q80|DERL3_HUMAN Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2
Length = 235
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 19/148 (12%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
RY LE+ +F RTADF++M +F ++ F++ L+A
Sbjct: 80 RYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALMA------------- 126
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
ML+YVWSR P +++ +GL+T +A +LPWA++ ++ G+ +L + LGI GH+
Sbjct: 127 -----MLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGHI 181
Query: 122 YYFLTVLHP-LAGGRNILATPRWVHKLV 148
YYFL + P GG+ +L TP ++ L+
Sbjct: 182 YYFLEDVFPNQPGGKRLLQTPGFLKLLL 209
>sp|Q0P5E4|DERL3_BOVIN Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1
Length = 231
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 19/148 (12%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
RY LE+ +F RTADF++M +F ++ F++ L A
Sbjct: 80 RYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALTA------------- 126
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
ML+YVWSR P +++ +GL+T +A +LPWA++ L ++ G+ +L + LGI GH+
Sbjct: 127 -----MLVYVWSRRSPGVRVNFFGLLTFQAPFLPWALMGLPMLLGNSILVDLLGIAVGHV 181
Query: 122 YYFLTVLHP-LAGGRNILATPRWVHKLV 148
YYFL + P GG+ +L TP ++ L+
Sbjct: 182 YYFLEDVFPNQPGGKRLLLTPSFLKLLL 209
>sp|Q9BUN8|DERL1_HUMAN Derlin-1 OS=Homo sapiens GN=DERL1 PE=1 SV=1
Length = 251
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 29/188 (15%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
+Y +LE F+ R AD+L+M++F+ W V++ L A+ M L
Sbjct: 81 QYSTRLETGAFDGRPADYLFMLLFN-----------WICIVITGL----AMDM---QLLM 122
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+ L+ +LYVW++ +S + KA YLPW +L + I G ++ +G + GHL
Sbjct: 123 IPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHL 182
Query: 122 YYFLTVLHPLA-GGRNILATPRWVHKLVAFWRLGHPTNASVQP--------ERGAGGAFT 172
Y+FL +P+ GGRN L+TP+++++ + R G + V P + G GG
Sbjct: 183 YFFLMFRYPMDLGGRNFLSTPQFLYRWLPS-RRGGVSGFGVPPASMRRAADQNGGGGRHN 241
Query: 173 -GRSYRLN 179
G+ +RL
Sbjct: 242 WGQGFRLG 249
>sp|Q71SS4|DERL1_BOVIN Derlin-1 OS=Bos taurus GN=DERL1 PE=2 SV=1
Length = 251
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 29/188 (15%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
+Y +LE F+ R AD+L+M++F+ W V++ L A+ M L
Sbjct: 81 QYSTRLETGAFDGRPADYLFMLLFN-----------WICIVITGL----AMDM---QLLM 122
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+ L+ +LYVW++ +S + KA YLPW +L + I G ++ +G + GHL
Sbjct: 123 IPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHL 182
Query: 122 YYFLTVLHPLA-GGRNILATPRWVHKLVAFWRLGHPTNASVQP--------ERGAGGAFT 172
Y+FL +P+ GGRN L+TP+++++ + R G + V P + G GG
Sbjct: 183 YFFLMFRYPMDLGGRNFLSTPQFLYRWLPS-RRGGVSGFGVPPASMRRAADQNGGGGRHN 241
Query: 173 -GRSYRLN 179
G+ +RL
Sbjct: 242 WGQGFRLG 249
>sp|Q99J56|DERL1_MOUSE Derlin-1 OS=Mus musculus GN=Derl1 PE=2 SV=1
Length = 251
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 29/188 (15%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
+Y +LE F+ R AD+L+M++F+ W V++ L A+ M L
Sbjct: 81 QYSTRLEAGAFDGRPADYLFMLLFN-----------WICIVITGL----AMDM---QLLM 122
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+ L+ +LYVW++ +S + KA YLPW +L + I G ++ +G + GHL
Sbjct: 123 IPLIMSVLYVWAQLNRDLIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHL 182
Query: 122 YYFLTVLHPLA-GGRNILATPRWVHKLVAFWRLGHPTNASVQP--------ERGAGGAFT 172
Y+FL +P+ GGRN L+TP+++++ + R G + V P + G GG
Sbjct: 183 YFFLMFRYPMDLGGRNFLSTPQFLYRWLPS-RRGGVSGFGVPPASMRRAADQNGGGGRHN 241
Query: 173 -GRSYRLN 179
G+ +RL
Sbjct: 242 WGQGFRLG 249
>sp|Q5R9W3|DERL1_PONAB Derlin-1 OS=Pongo abelii GN=DERL1 PE=2 SV=1
Length = 251
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 29/188 (15%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
Y +LE F+ R AD+L+M++F+ W V++ L A+ M L
Sbjct: 81 HYSTRLETGAFDGRPADYLFMLLFN-----------WICIVITGL----AMDM---QLLM 122
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+ L+ +LYVW++ +S + KA YLPW +L + I G ++ +G + GHL
Sbjct: 123 IPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHL 182
Query: 122 YYFLTVLHPLA-GGRNILATPRWVHKLVAFWRLGHPTNASVQP--------ERGAGGAFT 172
Y+FL +P+ GGRN L+TP+++++ + R G + V P + G GG
Sbjct: 183 YFFLMFRYPMDLGGRNFLSTPQFLYRWLPS-RRGGVSGFGVPPASMRRAADQNGGGGRHN 241
Query: 173 -GRSYRLN 179
G+ +RL
Sbjct: 242 WGQGFRLG 249
>sp|Q54IC9|DERL1_DICDI Probable derlin-1 homolog OS=Dictyostelium discoideum GN=derl1 PE=3
SV=1
Length = 242
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 59 FLGVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVI-FGSPLLPNFLGII 117
FLG + L+Y++SR PT + YG + K YLPW L + G P +FL I+
Sbjct: 117 FLGTMTIMSLIYIYSRMNPTGTSNFYGFFSFKTIYLPWVFLVAHFLQTGHPPYSDFLAIV 176
Query: 118 AGHLYYFLTVLHPLAGG-RNILATPRWVHKLVAFWRLGHPTNASVQPERG 166
+GH++++LT ++P A G ++ TP+++ + +P N P G
Sbjct: 177 SGHIFFYLTDIYPRANGVPALIKTPKFITNIFNKGDR-NPNNVRRDPRTG 225
>sp|Q93561|DERL1_CAEEL Derlin-1 OS=Caenorhabditis elegans GN=cup-2 PE=2 SV=1
Length = 245
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 2 RYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFLG 61
Y LE T+ R+AD+L+M+IF+ + + + D Y L E + +S
Sbjct: 80 NYSKALESETYRGRSADYLFMLIFNWFFCSGLCMAL-DIYFLLEPMVIS----------- 127
Query: 62 VSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGHL 121
+LYVW + +S + + A YLPW + + + +GI+ GH
Sbjct: 128 ------VLYVWCQVNKDTIVSFWFGMRFPARYLPWVLWGFNAVLRGGGTNELVGILVGHA 181
Query: 122 YYFLTVLHPLAGGRNILATPRWVHKLVAFWRLG-HPTNASVQPER 165
Y+F+ + +P G ++++TP ++H+L+ G H + +++ R
Sbjct: 182 YFFVALKYPDEYGVDLISTPEFLHRLIPDEDGGIHGQDGNIRGAR 226
>sp|Q9VQ57|DERL1_DROME Derlin-1 OS=Drosophila melanogaster GN=Der-1 PE=2 SV=1
Length = 245
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 20/149 (13%)
Query: 1 ARYGVQLEKSTFERRTADFLWMMIFSSYIIAEFFFSSWDFYVLSELLALSAIPMLWTPFL 60
+Y +LEK + R AD+L+++I S+ ++A ++ Y FL
Sbjct: 79 VQYSSKLEKDQYSRSPADYLYLLIVSA-VLANIGGMIFNVY-----------------FL 120
Query: 61 GVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGSPLLPNFLGIIAGH 120
+LV + Y+W + +S + KA YLPW + A + IF L + +GI GH
Sbjct: 121 MDTLVLAITYIWCQLNKDVTVSFWFGTRFKAMYLPWVLAAFEFIFHFS-LASLVGIFVGH 179
Query: 121 LYYFLTVLHPLA-GGRNILATPRWVHKLV 148
+YYF + GG +L TP+++ +LV
Sbjct: 180 VYYFFKFQYSQDLGGTPLLETPQFLKRLV 208
>sp|O94458|YFFH_SCHPO Uncharacterized derlin-like protein C1687.17c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC1687.17c PE=3 SV=2
Length = 190
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 56 WTPFLGVSLVFMLLYVWSREFPTAQISIYGLVTLKAFYLPWAMLALDVIFGS--PLLPNF 113
+ PF F +LY+WS + P +ISI GL +KA Y+PW M+ L + PLL +
Sbjct: 114 YMPFAASYFSFTMLYIWSWKHPLYRISILGLFDVKAPYVPWVMVLLRWLRTGIFPLL-DL 172
Query: 114 LGIIAGHLYYFLT 126
+ + GH+Y+F+T
Sbjct: 173 ISALIGHVYFFVT 185
>sp|A1YPR0|ZBT7C_HUMAN Zinc finger and BTB domain-containing protein 7C OS=Homo sapiens
GN=ZBTB7C PE=2 SV=1
Length = 619
Score = 33.1 bits (74), Expect = 1.3, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 95 PWAMLALDVIFG----SP-----LLPNFLGIIAGHLYYFLTVLHPLAGGRNILATPRWVH 145
P A A ++FG +P ++P LG + GHL L + ++ LA P+
Sbjct: 483 PAAWRAASLLFGPGGPAPDKAAFVMPPALGEVGGHLGGAAVCLPGPSPAKHFLAAPKGAL 542
Query: 146 KLVAFWRLGHPTN------ASVQPERGAGGAFTGRSYRLNLSSSRPFFP 188
L R T A ++ ER AGG + N++++RP+FP
Sbjct: 543 SLQELERQFEETQMKLFGRAQLEAERNAGG-LLAFALAENVAAARPYFP 590
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.142 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,667,880
Number of Sequences: 539616
Number of extensions: 3017015
Number of successful extensions: 8178
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8118
Number of HSP's gapped (non-prelim): 39
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)