Your job contains 1 sequence.
>035609
SSSSSSSSSSSFSSSSSSFTFPTLPFKPSKMVTPTPLLADSTRTFSTIFSLSGLFIKSLI
QNLAPTLNKSSLHCNIVHTVGPAFFARMRERPSGYLNTPLTVVAAGMAKWLDIYSGVLLS
WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG
M
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035609
(181 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132907 - symbol:YLMG1-2 "AT4G27990" species:3... 545 1.3e-52 1
TAIR|locus:2079656 - symbol:YLMG1-1 "AT3G07430" species:3... 481 7.9e-46 1
TAIR|locus:504956451 - symbol:YLMG2 "AT5G21920" species:3... 153 5.8e-11 1
UNIPROTKB|Q3AAH5 - symbol:CHY_2040 "Putative uncharacteri... 122 8.7e-08 1
TIGR_CMR|CHY_2040 - symbol:CHY_2040 "conserved hypothetic... 122 8.7e-08 1
UNIPROTKB|Q81WE1 - symbol:BAS3749 "YlmG protein" species:... 112 1.0e-06 1
TIGR_CMR|BA_4037 - symbol:BA_4037 "ylmG protein" species:... 112 1.0e-06 1
>TAIR|locus:2132907 [details] [associations]
symbol:YLMG1-2 "AT4G27990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR003425
Pfam:PF02325 EMBL:CP002687 GO:GO:0016020 GO:GO:0009941
EMBL:AL161572 EMBL:AL035524 ProtClustDB:CLSN2721564 EMBL:AK226522
IPI:IPI00530022 PIR:T02900 RefSeq:NP_194528.1 UniGene:At.22789
PRIDE:Q9SUE0 EnsemblPlants:AT4G27990.1 GeneID:828912
KEGG:ath:AT4G27990 TAIR:At4g27990 InParanoid:Q9SUE0 OMA:SKWLDIY
PhylomeDB:Q9SUE0 ArrayExpress:Q9SUE0 Genevestigator:Q9SUE0
Uniprot:Q9SUE0
Length = 218
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 113/162 (69%), Positives = 127/162 (78%)
Query: 25 PFKPSKMVTPTPLLADSTRTFSTIFSLSGLFIKSLIQNLAPTL-NKSSLHCNIVHTVGPA 83
P SK + P +DSTR+ +T+ L+G+ IKSLIQ L+ + N S T P
Sbjct: 58 PVLSSKPPSQFPF-SDSTRSITTLVLLAGVVIKSLIQKLSVAIVNLSPQIQASFRTASPL 116
Query: 84 FFARMRERPSGYLNTPLTVVAAGMAKWLDIYSGVL-----LSWFPNIPWDRQPLSAIRDL 138
FFA +R+RP+GYLNTPLTVVAAG++KWLDIYSGVL LSWFPNIPWDRQPLSAIRDL
Sbjct: 117 FFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDL 176
Query: 139 CDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG 180
CDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG
Sbjct: 177 CDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG 218
>TAIR|locus:2079656 [details] [associations]
symbol:YLMG1-1 "AT3G07430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016020 "membrane"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0010020 "chloroplast fission" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0090143 "nucleoid
organization" evidence=IMP] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR003425 Pfam:PF02325
EMBL:CP002686 GO:GO:0009941 GO:GO:0010020 GO:GO:0042651
EMBL:AC009853 GO:GO:0090143 EMBL:AY099847 EMBL:BT006263
IPI:IPI00528367 RefSeq:NP_566307.1 UniGene:At.28189 STRING:Q9SRS3
PRIDE:Q9SRS3 DNASU:819931 EnsemblPlants:AT3G07430.1 GeneID:819931
KEGG:ath:AT3G07430 TAIR:At3g07430 InParanoid:Q9SRS3 OMA:PSLSIQN
PhylomeDB:Q9SRS3 ProtClustDB:CLSN2721564 ArrayExpress:Q9SRS3
Genevestigator:Q9SRS3 Uniprot:Q9SRS3
Length = 232
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 102/170 (60%), Positives = 121/170 (71%)
Query: 23 TLPF-KPSKMVTPTPLLADSTRTFSTIFSLSGLFIKSLIQNLAPTLNKSS------LHCN 75
T P + K + L STR+ +T+ +L+ + L Q L+ + SS L +
Sbjct: 64 TTPILQTEKSTARSSTLTGSTRSLATLAALAIAVTRVLAQKLSLAIQTSSPVIADGLRFS 123
Query: 76 IVHTVGPAFFARMRERPSGYLNTPLTVVAAGMAKWLDIYSGVL-----LSWFPNIPWDRQ 130
+ T GP FFA +R+RP GYLNTPLTVVA G+ KWLDIYSGVL LSWFPNIPW+RQ
Sbjct: 124 L-STAGPVFFASLRDRPPGYLNTPLTVVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQ 182
Query: 131 PLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG 180
PLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSI++ S G
Sbjct: 183 PLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSIVHGSTG 232
>TAIR|locus:504956451 [details] [associations]
symbol:YLMG2 "AT5G21920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003425 Pfam:PF02325 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016020 EMBL:AC140977 EMBL:AL589883
KO:K02221 EMBL:BT005265 EMBL:AK118444 IPI:IPI00516557
RefSeq:NP_680180.1 UniGene:At.44737 UniGene:At.75172
EnsemblPlants:AT5G21920.1 GeneID:832252 KEGG:ath:AT5G21920
TAIR:At5g21920 HOGENOM:HOG000090706 InParanoid:Q9C595 OMA:MALPCEL
PhylomeDB:Q9C595 ProtClustDB:CLSN2690179 Genevestigator:Q9C595
Uniprot:Q9C595
Length = 251
Score = 153 (58.9 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 102 VVAAGMAKWLDIYSGVL-----LSWFPNIPWDR-QPLSAIRDLCDPYLNLFRNIIPPVFD 155
VVA G+ +L+IY+ +L L+WFP+ P PLS LCDPYLN+FR IPP+
Sbjct: 133 VVANGLINFLNIYNTILVVRLVLTWFPSAPPAIVNPLST---LCDPYLNIFRGFIPPL-G 188
Query: 156 TLDVSPLLAFAVLGTLGS 173
LD+SP+LAF VL S
Sbjct: 189 GLDLSPILAFLVLNAFTS 206
>UNIPROTKB|Q3AAH5 [details] [associations]
symbol:CHY_2040 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0762 KO:K02221
HOGENOM:HOG000048869 RefSeq:YP_360859.1 STRING:Q3AAH5
GeneID:3727880 KEGG:chy:CHY_2040 PATRIC:21277161 OMA:NARESRF
ProtClustDB:CLSK842071 BioCyc:CHYD246194:GJCN-2039-MONOMER
Uniprot:Q3AAH5
Length = 87
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 98 TPLTVVAAGMAKWLDIYSGVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTL 157
T +A + WL I VLL+W P + ++ I L DPYLNLFR +IPPV +
Sbjct: 5 TDFVNLAFNIYGWLIIIR-VLLTWIP-VNTYHPVVNFITSLTDPYLNLFRRLIPPV-GMI 61
Query: 158 DVSPLLAFAVL 168
D SP++AF VL
Sbjct: 62 DFSPIVAFFVL 72
>TIGR_CMR|CHY_2040 [details] [associations]
symbol:CHY_2040 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0762 KO:K02221
HOGENOM:HOG000048869 RefSeq:YP_360859.1 STRING:Q3AAH5
GeneID:3727880 KEGG:chy:CHY_2040 PATRIC:21277161 OMA:NARESRF
ProtClustDB:CLSK842071 BioCyc:CHYD246194:GJCN-2039-MONOMER
Uniprot:Q3AAH5
Length = 87
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 98 TPLTVVAAGMAKWLDIYSGVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTL 157
T +A + WL I VLL+W P + ++ I L DPYLNLFR +IPPV +
Sbjct: 5 TDFVNLAFNIYGWLIIIR-VLLTWIP-VNTYHPVVNFITSLTDPYLNLFRRLIPPV-GMI 61
Query: 158 DVSPLLAFAVL 168
D SP++AF VL
Sbjct: 62 DFSPIVAFFVL 72
>UNIPROTKB|Q81WE1 [details] [associations]
symbol:BAS3749 "YlmG protein" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003425
Pfam:PF02325 GO:GO:0016020 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR KO:K02221 HOGENOM:HOG000048869
RefSeq:NP_846277.1 RefSeq:YP_020679.1 RefSeq:YP_030000.1
TCDB:9.A.4.2.1 DNASU:1086657 EnsemblBacteria:EBBACT00000008750
EnsemblBacteria:EBBACT00000013883 EnsemblBacteria:EBBACT00000023912
GeneID:1086657 GeneID:2817303 GeneID:2848061 KEGG:ban:BA_4037
KEGG:bar:GBAA_4037 KEGG:bat:BAS3749 OMA:LATICEP
ProtClustDB:CLSK917205 BioCyc:BANT260799:GJAJ-3807-MONOMER
BioCyc:BANT261594:GJ7F-3925-MONOMER Uniprot:Q81WE1
Length = 87
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 100 LTVVAAGMAKW-LDIYSGVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLD 158
L V A + W L IY +LLSWFP + + +C+PYL FR IPP+ +D
Sbjct: 7 LLVTAIEIYSWALIIY--ILLSWFPGAK-ESTFGDFLARICEPYLEPFRRFIPPL-GMID 62
Query: 159 VSPLLA-FAV-LGTLGSI 174
+SPL+A FA+ L T G +
Sbjct: 63 ISPLVAIFALKLATSGLV 80
>TIGR_CMR|BA_4037 [details] [associations]
symbol:BA_4037 "ylmG protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003425
Pfam:PF02325 GO:GO:0016020 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR KO:K02221 HOGENOM:HOG000048869
RefSeq:NP_846277.1 RefSeq:YP_020679.1 RefSeq:YP_030000.1
TCDB:9.A.4.2.1 DNASU:1086657 EnsemblBacteria:EBBACT00000008750
EnsemblBacteria:EBBACT00000013883 EnsemblBacteria:EBBACT00000023912
GeneID:1086657 GeneID:2817303 GeneID:2848061 KEGG:ban:BA_4037
KEGG:bar:GBAA_4037 KEGG:bat:BAS3749 OMA:LATICEP
ProtClustDB:CLSK917205 BioCyc:BANT260799:GJAJ-3807-MONOMER
BioCyc:BANT261594:GJ7F-3925-MONOMER Uniprot:Q81WE1
Length = 87
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 100 LTVVAAGMAKW-LDIYSGVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLD 158
L V A + W L IY +LLSWFP + + +C+PYL FR IPP+ +D
Sbjct: 7 LLVTAIEIYSWALIIY--ILLSWFPGAK-ESTFGDFLARICEPYLEPFRRFIPPL-GMID 62
Query: 159 VSPLLA-FAV-LGTLGSI 174
+SPL+A FA+ L T G +
Sbjct: 63 ISPLVAIFALKLATSGLV 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.437 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 181 162 0.00079 107 3 11 22 0.46 31
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 582 (62 KB)
Total size of DFA: 145 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 16.86u 0.07s 16.93t Elapsed: 00:00:22
Total cpu time: 16.86u 0.07s 16.93t Elapsed: 00:00:23
Start: Fri May 10 00:01:28 2013 End: Fri May 10 00:01:51 2013