Query 035610
Match_columns 144
No_of_seqs 119 out of 1045
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 04:32:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035610.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035610hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01264 PH_melted Melted pleck 99.9 1.3E-24 2.8E-29 139.5 11.3 94 28-125 1-101 (101)
2 cd01251 PH_centaurin_alpha Cen 99.9 5.3E-24 1.1E-28 138.1 12.1 95 29-127 1-102 (103)
3 cd01233 Unc104 Unc-104 pleckst 99.9 2.6E-23 5.6E-28 134.2 12.4 94 27-125 2-98 (100)
4 cd01260 PH_CNK Connector enhan 99.9 1.7E-22 3.6E-27 129.4 11.7 91 28-124 1-96 (96)
5 cd01238 PH_Tec Tec pleckstrin 99.9 1.7E-22 3.6E-27 131.7 11.5 94 28-123 1-105 (106)
6 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 1.8E-22 3.9E-27 129.1 11.3 89 29-124 1-93 (95)
7 cd01247 PH_GPBP Goodpasture an 99.9 4.2E-22 9E-27 126.4 12.2 89 29-123 1-90 (91)
8 cd01236 PH_outspread Outspread 99.9 6.3E-22 1.4E-26 128.0 11.7 92 29-123 1-102 (104)
9 cd01235 PH_SETbf Set binding f 99.9 1.1E-21 2.3E-26 126.6 12.7 93 29-125 1-101 (101)
10 cd01257 PH_IRS Insulin recepto 99.9 1.4E-21 3E-26 125.9 12.4 92 27-123 2-100 (101)
11 cd01252 PH_cytohesin Cytohesin 99.9 4E-21 8.8E-26 128.7 13.5 94 28-127 1-115 (125)
12 cd01266 PH_Gab Gab (Grb2-assoc 99.9 1.3E-20 2.7E-25 123.3 11.3 90 30-123 2-106 (108)
13 cd01245 PH_RasGAP_CG5898 RAS G 99.8 1.3E-20 2.9E-25 120.4 9.4 89 29-123 1-97 (98)
14 cd01246 PH_oxysterol_bp Oxyste 99.8 9.3E-20 2E-24 115.0 12.0 88 29-124 1-91 (91)
15 KOG0930 Guanine nucleotide exc 99.8 3.1E-20 6.7E-25 136.4 10.9 101 21-127 254-377 (395)
16 cd01250 PH_centaurin Centaurin 99.8 2.1E-19 4.5E-24 114.0 11.4 92 29-123 1-93 (94)
17 cd01244 PH_RasGAP_CG9209 RAS_G 99.8 3.9E-19 8.4E-24 113.9 11.4 79 40-123 18-97 (98)
18 cd01241 PH_Akt Akt pleckstrin 99.8 1.9E-18 4.1E-23 111.9 12.0 89 28-124 2-101 (102)
19 PF00169 PH: PH domain; Inter 99.8 6.4E-18 1.4E-22 107.9 13.6 96 28-125 2-103 (104)
20 cd01263 PH_anillin Anillin Ple 99.7 2.1E-17 4.5E-22 109.6 10.3 96 28-124 2-122 (122)
21 cd01219 PH_FGD FGD (faciogenit 99.7 6.1E-17 1.3E-21 104.6 12.4 97 28-126 3-100 (101)
22 PF15409 PH_8: Pleckstrin homo 99.7 4.1E-16 8.8E-21 97.6 10.6 85 31-124 1-88 (89)
23 cd01254 PH_PLD Phospholipase D 99.7 3.7E-16 7.9E-21 104.1 10.5 92 29-124 1-121 (121)
24 cd01220 PH_CDEP Chondrocyte-de 99.7 4.8E-15 1E-19 95.3 12.5 96 28-126 3-98 (99)
25 PF15413 PH_11: Pleckstrin hom 99.7 1.8E-15 4E-20 99.4 10.6 96 29-124 1-112 (112)
26 cd01256 PH_dynamin Dynamin ple 99.7 2.5E-15 5.4E-20 94.4 10.4 94 28-126 2-106 (110)
27 smart00233 PH Pleckstrin homol 99.6 1.9E-14 4.2E-19 90.5 13.5 96 28-125 2-101 (102)
28 cd01253 PH_beta_spectrin Beta- 99.6 5.6E-15 1.2E-19 95.7 10.4 92 29-123 1-103 (104)
29 cd01230 PH_EFA6 EFA6 Pleckstri 99.6 3.3E-14 7E-19 93.9 12.5 98 29-127 2-113 (117)
30 cd01237 Unc112 Unc-112 pleckst 99.5 8.1E-14 1.8E-18 89.6 9.6 84 39-125 16-103 (106)
31 cd00821 PH Pleckstrin homology 99.5 1.5E-13 3.2E-18 85.6 9.8 93 29-123 1-95 (96)
32 cd00900 PH-like Pleckstrin hom 99.5 8.1E-13 1.7E-17 82.8 12.0 90 30-124 2-99 (99)
33 cd01218 PH_phafin2 Phafin2 Pl 99.4 9.8E-12 2.1E-16 80.4 12.1 97 28-128 5-101 (104)
34 PF15410 PH_9: Pleckstrin homo 99.4 2.4E-11 5.2E-16 80.6 11.9 96 29-125 2-118 (119)
35 cd01234 PH_CADPS CADPS (Ca2+-d 99.2 3.2E-11 7E-16 76.6 6.4 93 28-126 3-111 (117)
36 cd01239 PH_PKD Protein kinase 99.2 2.1E-10 4.6E-15 74.4 9.9 93 28-124 1-117 (117)
37 KOG1090 Predicted dual-specifi 99.2 3.8E-12 8.2E-17 106.7 2.3 96 26-125 1633-1731(1732)
38 KOG0690 Serine/threonine prote 99.2 1.8E-11 3.9E-16 93.1 5.4 98 26-126 14-117 (516)
39 cd01261 PH_SOS Son of Sevenles 99.2 1E-09 2.2E-14 71.8 10.8 98 28-126 5-110 (112)
40 cd01242 PH_ROK Rok (Rho- assoc 99.1 3.4E-09 7.3E-14 68.4 12.1 96 29-125 2-110 (112)
41 PF14593 PH_3: PH domain; PDB: 99.1 3.2E-09 6.9E-14 68.6 11.2 89 26-127 12-101 (104)
42 KOG2059 Ras GTPase-activating 99.1 2.5E-10 5.4E-15 93.1 5.7 95 29-128 567-667 (800)
43 KOG3640 Actin binding protein 99.0 5.5E-10 1.2E-14 93.4 7.1 101 26-127 989-1108(1116)
44 cd01243 PH_MRCK MRCK (myotonic 99.0 2.7E-08 5.8E-13 65.2 12.4 96 28-123 3-117 (122)
45 cd01249 PH_oligophrenin Oligop 98.9 3.4E-08 7.3E-13 63.5 9.3 92 29-122 1-102 (104)
46 KOG3723 PH domain protein Melt 98.8 1.3E-09 2.8E-14 87.4 1.6 124 2-129 711-840 (851)
47 cd01259 PH_Apbb1ip Apbb1ip (Am 98.8 3.7E-08 8E-13 63.7 7.6 93 29-125 2-108 (114)
48 PLN00188 enhanced disease resi 98.8 4.9E-08 1.1E-12 80.6 10.2 101 26-128 3-112 (719)
49 PTZ00267 NIMA-related protein 98.7 2E-07 4.3E-12 75.0 10.3 100 24-125 374-476 (478)
50 cd01240 PH_beta-ARK Beta adren 98.7 2.9E-08 6.3E-13 63.7 3.9 96 26-126 2-99 (116)
51 cd01224 PH_Collybistin Collybi 98.6 2E-06 4.2E-11 55.9 11.9 95 28-123 3-105 (109)
52 cd01258 PH_syntrophin Syntroph 98.6 2E-07 4.3E-12 60.5 7.3 92 31-123 3-107 (108)
53 cd01226 PH_exo84 Exocyst compl 98.6 1.9E-06 4.1E-11 55.1 10.3 94 29-125 4-98 (100)
54 KOG0521 Putative GTPase activa 98.5 6.1E-08 1.3E-12 81.8 3.0 103 26-133 273-376 (785)
55 cd01262 PH_PDK1 3-Phosphoinosi 98.5 3.5E-06 7.5E-11 52.6 9.2 85 28-125 2-88 (89)
56 cd01225 PH_Cool_Pix Cool (clon 98.4 1.3E-05 2.7E-10 52.0 11.0 95 29-125 14-109 (111)
57 cd01222 PH_clg Clg (common-sit 98.4 1.7E-05 3.6E-10 50.7 11.2 90 27-126 4-96 (97)
58 PLN02866 phospholipase D 98.4 1.1E-05 2.3E-10 69.6 13.3 101 25-129 180-311 (1068)
59 PF12814 Mcp5_PH: Meiotic cell 98.4 2E-05 4.4E-10 52.5 11.9 97 29-125 11-121 (123)
60 KOG4424 Predicted Rho/Rac guan 98.3 2E-06 4.4E-11 69.3 6.5 103 24-128 269-372 (623)
61 KOG1739 Serine/threonine prote 98.2 2.9E-06 6.3E-11 67.3 6.2 89 29-123 26-114 (611)
62 KOG0248 Cytoplasmic protein Ma 98.1 2.7E-06 5.8E-11 69.9 3.1 93 29-127 251-343 (936)
63 KOG3751 Growth factor receptor 98.0 1.9E-05 4.1E-10 63.3 7.1 97 24-124 314-423 (622)
64 cd01223 PH_Vav Vav pleckstrin 98.0 0.00011 2.4E-09 48.2 9.1 103 25-127 2-113 (116)
65 PTZ00283 serine/threonine prot 98.0 2.8E-05 6.1E-10 63.1 7.1 100 25-125 371-489 (496)
66 cd01221 PH_ephexin Ephexin Ple 97.9 0.00053 1.1E-08 45.7 10.7 80 43-122 27-119 (125)
67 KOG0932 Guanine nucleotide exc 97.8 1.6E-05 3.5E-10 64.3 2.6 95 29-126 508-618 (774)
68 PF15406 PH_6: Pleckstrin homo 97.6 0.00027 5.8E-09 45.6 6.2 64 51-123 47-111 (112)
69 KOG3531 Rho guanine nucleotide 97.6 9.6E-06 2.1E-10 68.0 -0.8 93 29-125 926-1019(1036)
70 KOG1117 Rho- and Arf-GTPase ac 97.6 0.00041 9E-09 58.8 8.2 98 24-125 489-601 (1186)
71 cd01228 PH_BCR-related BCR (br 97.6 0.00076 1.6E-08 42.6 7.5 87 27-124 3-93 (96)
72 KOG1117 Rho- and Arf-GTPase ac 97.6 3.7E-05 8.1E-10 64.9 1.9 96 24-128 84-180 (1186)
73 cd01231 PH_Lnk LNK-family Plec 97.5 0.00086 1.9E-08 42.7 7.0 81 39-123 17-106 (107)
74 PF15408 PH_7: Pleckstrin homo 97.4 8.8E-05 1.9E-09 45.8 1.8 87 30-123 1-95 (104)
75 cd01232 PH_TRIO Trio pleckstri 97.4 0.0042 9.2E-08 40.8 9.7 83 41-126 22-113 (114)
76 KOG1451 Oligophrenin-1 and rel 97.2 0.00083 1.8E-08 55.0 6.1 99 24-124 262-366 (812)
77 cd01248 PH_PLC Phospholipase C 96.9 0.024 5.3E-07 37.0 9.9 76 43-123 21-114 (115)
78 KOG3543 Ca2+-dependent activat 96.7 0.00042 9.2E-09 57.2 -0.0 98 25-127 462-567 (1218)
79 KOG4236 Serine/threonine prote 96.3 0.0063 1.4E-07 50.0 4.5 95 26-125 412-523 (888)
80 KOG1737 Oxysterol-binding prot 96.3 0.0045 9.8E-08 52.7 3.8 91 27-124 77-167 (799)
81 cd01227 PH_Dbs Dbs (DBL's big 96.0 0.15 3.3E-06 34.4 9.2 85 42-129 28-119 (133)
82 PF15411 PH_10: Pleckstrin hom 95.9 0.27 5.9E-06 32.4 9.9 92 26-121 6-116 (116)
83 KOG1738 Membrane-associated gu 95.5 0.00098 2.1E-08 54.7 -3.1 68 21-93 556-626 (638)
84 KOG3523 Putative guanine nucle 95.5 0.028 6E-07 46.4 4.9 81 42-122 498-591 (695)
85 KOG3549 Syntrophins (type gamm 95.5 0.022 4.8E-07 44.2 4.1 103 24-127 278-388 (505)
86 KOG4807 F-actin binding protei 95.4 5.3E-05 1.1E-09 59.0 -10.3 83 40-125 32-114 (593)
87 PF15405 PH_5: Pleckstrin homo 95.1 0.15 3.2E-06 34.5 6.8 94 29-124 3-134 (135)
88 KOG2070 Guanine nucleotide exc 94.0 0.1 2.2E-06 42.3 4.6 78 44-123 326-404 (661)
89 KOG4424 Predicted Rho/Rac guan 93.5 0.078 1.7E-06 43.6 3.1 96 29-128 499-598 (623)
90 KOG3551 Syntrophins (type beta 93.3 0.056 1.2E-06 42.6 1.9 99 26-124 291-400 (506)
91 cd01255 PH_TIAM TIAM Pleckstri 93.1 1.9 4E-05 29.5 8.8 82 45-128 51-157 (160)
92 KOG3727 Mitogen inducible gene 93.0 0.016 3.5E-07 47.4 -1.4 92 40-135 372-466 (664)
93 KOG0248 Cytoplasmic protein Ma 93.0 0.029 6.2E-07 47.1 -0.0 88 27-123 259-346 (936)
94 KOG1264 Phospholipase C [Lipid 90.6 0.37 8E-06 41.6 3.9 59 69-127 851-912 (1267)
95 KOG3531 Rho guanine nucleotide 87.5 0.52 1.1E-05 40.7 2.8 96 29-128 752-847 (1036)
96 PF08458 PH_2: Plant pleckstri 87.4 2.6 5.7E-05 27.4 5.5 37 91-127 69-105 (110)
97 PF15404 PH_4: Pleckstrin homo 87.0 1.3 2.8E-05 31.6 4.2 32 29-60 1-32 (185)
98 KOG4047 Docking protein 1 (p62 86.9 0.55 1.2E-05 37.7 2.5 101 25-127 6-119 (429)
99 KOG2996 Rho guanine nucleotide 86.2 3.4 7.3E-05 34.7 6.6 106 21-130 400-516 (865)
100 KOG0705 GTPase-activating prot 86.1 0.66 1.4E-05 38.6 2.6 33 94-126 447-480 (749)
101 KOG3520 Predicted guanine nucl 81.4 2.9 6.3E-05 37.6 4.7 68 53-129 655-725 (1167)
102 KOG4407 Predicted Rho GTPase-a 80.4 0.057 1.2E-06 48.4 -5.7 104 21-125 917-1041(1973)
103 PF15404 PH_4: Pleckstrin homo 78.9 2.2 4.8E-05 30.4 2.8 25 99-123 159-183 (185)
104 KOG3551 Syntrophins (type beta 78.5 3.1 6.7E-05 33.1 3.6 35 92-126 236-272 (506)
105 PF15277 Sec3-PIP2_bind: Exocy 71.9 21 0.00046 22.2 9.1 80 44-125 4-88 (91)
106 KOG1170 Diacylglycerol kinase 71.7 0.079 1.7E-06 45.3 -6.9 90 29-125 4-94 (1099)
107 KOG0592 3-phosphoinositide-dep 69.7 17 0.00037 30.4 6.0 83 29-124 453-536 (604)
108 KOG0517 Beta-spectrin [Cytoske 68.5 0.098 2.1E-06 48.3 -7.4 99 28-126 2300-2410(2473)
109 PF04714 BCL_N: BCL7, N-termin 65.8 3.6 7.8E-05 22.9 1.0 21 40-60 27-47 (52)
110 KOG1729 FYVE finger containing 65.7 1.7 3.7E-05 33.2 -0.4 85 42-128 59-143 (288)
111 cd05394 RasGAP_RASA2 RASA2 (or 62.2 1.4 3E-05 34.1 -1.4 27 26-52 282-313 (313)
112 cd05134 RasGAP_RASA3 RASA3 (or 60.8 2.1 4.5E-05 33.1 -0.7 27 26-52 279-310 (310)
113 cd05128 RasGAP_GAP1_like The G 56.3 2.5 5.5E-05 32.7 -0.9 26 26-51 285-315 (315)
114 KOG4095 Uncharacterized conser 54.0 6.9 0.00015 26.9 1.0 22 40-61 28-49 (165)
115 cd05135 RasGAP_RASAL Ras GTPas 52.2 3.9 8.6E-05 31.9 -0.4 26 26-51 302-333 (333)
116 cd01229 PH_etc2 Epithelial cel 51.7 69 0.0015 21.3 6.1 56 71-126 66-128 (129)
117 PF08671 SinI: Anti-repressor 50.0 4.2 9.1E-05 20.1 -0.4 23 115-140 3-25 (30)
118 PF14784 ECIST_Cterm: C-termin 49.1 78 0.0017 21.1 5.8 16 108-123 96-111 (126)
119 KOG0705 GTPase-activating prot 44.4 3.9 8.4E-05 34.3 -1.6 37 26-62 301-340 (749)
120 PF14470 bPH_3: Bacterial PH d 41.0 81 0.0018 19.0 9.5 76 42-122 20-95 (96)
121 PF14844 PH_BEACH: PH domain a 33.2 1.2E+02 0.0027 18.9 6.2 51 67-118 51-102 (106)
122 KOG0976 Rho/Rac1-interacting s 29.0 39 0.00084 29.9 1.9 98 28-126 813-920 (1265)
123 KOG3518 Putative guanine nucle 27.3 65 0.0014 25.5 2.6 37 91-127 395-434 (521)
124 KOG2674 Cysteine protease requ 26.7 3.5E+02 0.0076 22.0 7.6 26 99-124 328-353 (409)
125 KOG4277 Uncharacterized conser 25.2 1.8E+02 0.0038 22.9 4.6 49 90-140 314-362 (468)
126 PF10882 bPH_5: Bacterial PH d 25.1 1.7E+02 0.0037 17.9 4.0 30 91-123 69-98 (100)
127 PF12456 hSac2: Inositol phosp 24.6 2E+02 0.0044 18.6 6.6 73 26-99 29-111 (115)
128 KOG1329 Phospholipase D1 [Lipi 22.5 62 0.0013 28.7 2.0 91 29-125 177-269 (887)
129 KOG1264 Phospholipase C [Lipid 22.2 1.4E+02 0.0029 26.9 3.8 35 26-60 474-508 (1267)
130 PLN02958 diacylglycerol kinase 21.8 1.7E+02 0.0037 24.1 4.3 27 102-128 82-108 (481)
131 PF12213 Dpoe2NT: DNA polymera 21.1 83 0.0018 18.8 1.8 22 108-129 34-55 (73)
132 KOG2677 Stoned B synaptic vesi 21.0 2.5E+02 0.0053 24.5 5.0 82 40-125 465-571 (922)
133 PF07315 DUF1462: Protein of u 20.9 1.1E+02 0.0023 19.3 2.3 17 107-123 14-30 (93)
134 COG4026 Uncharacterized protei 20.8 1.6E+02 0.0035 21.9 3.5 25 102-126 249-273 (290)
No 1
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.92 E-value=1.3e-24 Score=139.49 Aligned_cols=94 Identities=22% Similarity=0.279 Sum_probs=81.9
Q ss_pred ceEEEEEeeCC---CCCCceeEEEEEeCCeEEEEecCCCCCCCCC-cceEEeCCceEEEeeccccC---CCCceEEEEeC
Q 035610 28 GAIGPANKQGD---YIKTWLRRWFILKQGEHFWFKDSHNITRGST-PRGFIPVGTCLTVKCAEDVL---NKPFAFEHSRG 100 (144)
Q Consensus 28 ~~~G~L~k~~~---~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~-~~~~i~L~~~~~v~~~~~~~---~~~~~f~I~~~ 100 (144)
+.+|||.++|+ ..++|++|||+|+++.|+||+... ... +.++|+|+.|..|..+++.. ..+++|.|.++
T Consensus 1 ~~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~----~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp 76 (101)
T cd01264 1 LIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKS----KDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTA 76 (101)
T ss_pred CcceEEeecCccceeeecceeEEEEEeCCEEEEEeccC----ccCCCCceEEcccceEEeeccccccccccCcEEEEEcC
Confidence 36899999988 789999999999999999999875 333 45999999999998776432 44799999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 101 GYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 101 ~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
+++|+|+|+|++++++||++|+.|+
T Consensus 77 ~rt~~l~A~se~e~e~WI~~i~~a~ 101 (101)
T cd01264 77 DKTYILKAKDEKNAEEWLQCLNIAV 101 (101)
T ss_pred CceEEEEeCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999863
No 2
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.92 E-value=5.3e-24 Score=138.13 Aligned_cols=95 Identities=19% Similarity=0.304 Sum_probs=79.2
Q ss_pred eEEEEEeeCCC-CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEE---Eeec-c-c-cCCCCceEEEEeCC
Q 035610 29 AIGPANKQGDY-IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLT---VKCA-E-D-VLNKPFAFEHSRGG 101 (144)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~---v~~~-~-~-~~~~~~~f~I~~~~ 101 (144)
++|||.|+|+. .+.|++|||+|+++.|+||+++. +..+.|.|+|+.+.. |... . + .....++|.|.+++
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~----d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~ 76 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPL----DAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPE 76 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCC----CcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCC
Confidence 58999999986 68999999999999999999987 678999999986532 3221 1 1 12333599999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 102 YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 102 ~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
++|+|.|+|++|+++||++|+.++..
T Consensus 77 Rty~l~a~s~~e~~~Wi~ai~~v~~~ 102 (103)
T cd01251 77 RKFLFACETEQDRREWIAAFQNVLSR 102 (103)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999854
No 3
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.91 E-value=2.6e-23 Score=134.24 Aligned_cols=94 Identities=17% Similarity=0.246 Sum_probs=81.6
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc---cCCCCceEEEEeCCeE
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---VLNKPFAFEHSRGGYT 103 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~---~~~~~~~f~I~~~~~~ 103 (144)
..++|||.|+|+..+.|++|||+|+++.|.||+++. +..+.+.|+|..+.. ...++ ..+++++|.|.+++++
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~----~~~~~~~I~L~~~~v-~~~~~~~~~~~~~~~F~I~t~~rt 76 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDK----DPVERGVINLSTARV-EHSEDQAAMVKGPNTFAVCTKHRG 76 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCC----CccEeeEEEecccEE-EEccchhhhcCCCcEEEEECCCCE
Confidence 358999999999889999999999999999999987 788999999997543 33332 1347899999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q 035610 104 MYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai 125 (144)
|+|+|+|++|+++||.+|+..+
T Consensus 77 ~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 77 YLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred EEEEcCCHHHHHHHHHHhhhhh
Confidence 9999999999999999998865
No 4
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.89 E-value=1.7e-22 Score=129.44 Aligned_cols=91 Identities=23% Similarity=0.432 Sum_probs=78.0
Q ss_pred ceEEEEEeeCCC----CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-e
Q 035610 28 GAIGPANKQGDY----IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-Y 102 (144)
Q Consensus 28 ~~~G~L~k~~~~----~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~ 102 (144)
+++|||.|++.. .+.|++|||+|.++.|+||+++. +..+.+.|+|.++... ...+ ..++++|.|.+++ +
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~----~~~~~~~I~L~~~~v~-~~~~-~~k~~~F~I~~~~~~ 74 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQ----DEKAEGLIFLSGFTIE-SAKE-VKKKYAFKVCHPVYK 74 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCC----CCccceEEEccCCEEE-Echh-cCCceEEEECCCCCc
Confidence 368999999654 44999999999999999999997 7789999999997443 3333 3588999999888 9
Q ss_pred EEEEEcCCHHHHHHHHHHHHHH
Q 035610 103 TMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~a 124 (144)
+|+|+|+|.+++++||.+|+.|
T Consensus 75 ~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 75 SFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred EEEEEeCCHHHHHHHHHHHHhC
Confidence 9999999999999999999874
No 5
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.89 E-value=1.7e-22 Score=131.71 Aligned_cols=94 Identities=15% Similarity=0.217 Sum_probs=78.1
Q ss_pred ceEEEEEeeCCCC-----CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccC------CCCceEE
Q 035610 28 GAIGPANKQGDYI-----KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL------NKPFAFE 96 (144)
Q Consensus 28 ~~~G~L~k~~~~~-----~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~------~~~~~f~ 96 (144)
+++|+|.|++... ++|++|||||+++.|+||+++.+ ....++|.|+|..+..+....+.. ...++|+
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~--~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~ 78 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFE--KRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQ 78 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcc--cccCcceeEECCcceEEEEecCCcCcccccccCccEE
Confidence 4799999996432 39999999999999999998761 124799999999987776554322 3578999
Q ss_pred EEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610 97 HSRGGYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 97 I~~~~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
|.+++++||+.|+|++|+++||++|++
T Consensus 79 i~t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 79 VVHDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred EEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 999999999999999999999999986
No 6
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.89 E-value=1.8e-22 Score=129.12 Aligned_cols=89 Identities=17% Similarity=0.247 Sum_probs=76.3
Q ss_pred eEEEEEeeCC--CCCCceeEEEEEeC--CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEE
Q 035610 29 AIGPANKQGD--YIKTWLRRWFILKQ--GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTM 104 (144)
Q Consensus 29 ~~G~L~k~~~--~~~~w~~R~fvL~~--~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~ 104 (144)
.+|||+|+|+ ..+.|++|||||.+ ..|+||+++. +..|+|.|+|.++..+...+ ..++.|.|.++++.|
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~----d~~p~G~I~L~~~~~~~~~~---~~~~~F~i~t~~r~y 73 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQ----DAKPLGRVDLSGAAFTYDPR---EEKGRFEIHSNNEVI 73 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCC----cccccceEECCccEEEcCCC---CCCCEEEEEcCCcEE
Confidence 3699999986 36899999999985 4799999987 78899999999965543332 246899999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHH
Q 035610 105 YSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 105 ~l~a~s~~e~~~Wi~al~~a 124 (144)
+|.|+|++|+++||++|+.+
T Consensus 74 ~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 74 ALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred EEECCCHHHHHHHHHHHHhh
Confidence 99999999999999999985
No 7
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.89 E-value=4.2e-22 Score=126.42 Aligned_cols=89 Identities=22% Similarity=0.352 Sum_probs=75.2
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEEEE
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMYSV 107 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~l~ 107 (144)
.+|||.|++...+.|++|||||+++.|.||+++.+. ...++|.|+|..|..+.. + ..++.|.|.+.+ ++|+|.
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~--~~~~~G~I~L~~~~i~~~--~--~~~~~F~i~~~~~r~~~L~ 74 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEK--SHGCRGSIFLKKAIIAAH--E--FDENRFDISVNENVVWYLR 74 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccC--cCCCcEEEECcccEEEcC--C--CCCCEEEEEeCCCeEEEEE
Confidence 379999999999999999999999999999998611 235799999999755432 2 346899997655 999999
Q ss_pred cCCHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGR 123 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ 123 (144)
|+|++|+++||++|++
T Consensus 75 A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 75 AENSQSRLLWMDSVVR 90 (91)
T ss_pred eCCHHHHHHHHHHHhh
Confidence 9999999999999986
No 8
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.88 E-value=6.3e-22 Score=128.00 Aligned_cols=92 Identities=26% Similarity=0.305 Sum_probs=76.8
Q ss_pred eEEEEEeeCC---------CCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610 29 AIGPANKQGD---------YIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS 98 (144)
Q Consensus 29 ~~G~L~k~~~---------~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~ 98 (144)
++|||.|.++ ..+.|++|||||++ +.|+||+++. .+..++|.|+|+.|..|..+++..+.+++|.|.
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~---~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~ 77 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEM---PTTLPQGTIDMNQCTDVVDAEARTGQKFSICIL 77 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCC---CCcccceEEEccceEEEeecccccCCccEEEEE
Confidence 4799999853 35799999999985 6677776552 146789999999999888776655667999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610 99 RGGYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 99 ~~~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
+++++|+|.|+|++|+++||++|..
T Consensus 78 tp~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 78 TPDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHh
Confidence 9999999999999999999999864
No 9
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.88 E-value=1.1e-21 Score=126.60 Aligned_cols=93 Identities=22% Similarity=0.346 Sum_probs=79.1
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeC--CeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEEEeC
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQ--GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEHSRG 100 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~--~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I~~~ 100 (144)
.+|||.|+|+..+.|++|||+|.+ +.|.||+++. +..+.|.|+|..+..+....+. ....+.|.|.++
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~----~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~ 76 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFE----DTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTS 76 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCC----CCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeC
Confidence 379999999999999999999994 4899999987 7889999999997776543221 124467999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 101 GYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 101 ~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
.+.|+|.|++.+++.+||++|+++|
T Consensus 77 ~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 77 KRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred CceEEEECCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999864
No 10
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.88 E-value=1.4e-21 Score=125.93 Aligned_cols=92 Identities=18% Similarity=0.345 Sum_probs=78.3
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCC------eEEEEecCCCCCC-CCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQG------EHFWFKDSHNITR-GSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR 99 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~------~l~y~k~~~~~~~-~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~ 99 (144)
..++|||.|+ ++|++|||||+++ .|.||+++.+... ...|+++|+|..|..|....+ ..++++|.|.+
T Consensus 2 v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d-~k~~~~f~i~t 76 (101)
T cd01257 2 VRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRAD-AKHRHLIALYT 76 (101)
T ss_pred ccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccc-cccCeEEEEEe
Confidence 5689999998 7999999999987 7999999862111 267999999999998876555 34569999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHH
Q 035610 100 GGYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 100 ~~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
++++|+|.|+|++|+++|+.+|..
T Consensus 77 ~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 77 RDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred CCceEEEEeCCHHHHHHHHHHHhh
Confidence 999999999999999999999864
No 11
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.87 E-value=4e-21 Score=128.67 Aligned_cols=94 Identities=35% Similarity=0.560 Sum_probs=80.1
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC------
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG------ 101 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~------ 101 (144)
+++|||.|+++..+.|++|||+|.++.|+||+++. +..+.+.|+|+++. |...++ ..++++|.|..++
T Consensus 1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~----~~~~~g~I~L~~~~-v~~~~~-~~~~~~F~i~~~~~~~~i~ 74 (125)
T cd01252 1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENVS-IREVED-PSKPFCFELFSPSDKQQIK 74 (125)
T ss_pred CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCC----CCCceEEEECCCcE-EEEccc-CCCCeeEEEECCccccccc
Confidence 47899999998899999999999999999999987 77899999999854 433333 3577999988644
Q ss_pred ---------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 102 ---------------YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 102 ---------------~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
+.|+|+|+|.+|+++||++|+.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~ 115 (125)
T cd01252 75 ACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISP 115 (125)
T ss_pred cccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 47789999999999999999998854
No 12
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.85 E-value=1.3e-20 Score=123.27 Aligned_cols=90 Identities=23% Similarity=0.322 Sum_probs=75.0
Q ss_pred EEEEEeeCC----CCCCceeEEEEEeCCe-------EEEEecCCCCCCCCCcceEEeCCceEEEeecc----ccCCCCce
Q 035610 30 IGPANKQGD----YIKTWLRRWFILKQGE-------HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE----DVLNKPFA 94 (144)
Q Consensus 30 ~G~L~k~~~----~~~~w~~R~fvL~~~~-------l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~----~~~~~~~~ 94 (144)
+|||.|+++ ..+.|++|||+|.++. |.||+++. +..+.|.|+|..+..+.... ......+.
T Consensus 2 eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~----~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~ 77 (108)
T cd01266 2 EGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSR----KFKLEFVIDLESCSQVDPGLLCTAGNCIFGYG 77 (108)
T ss_pred ceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCC----CCccceEEECCccEEEcccccccccCcccceE
Confidence 799999987 3459999999999876 59999987 78999999999976664321 11233467
Q ss_pred EEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610 95 FEHSRGGYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 95 f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
|.|.++.++|+|.|+|++|+++||.+|++
T Consensus 78 f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~ 106 (108)
T cd01266 78 FDIETIVRDLYLVAKNEEEMTLWVNCICK 106 (108)
T ss_pred EEEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999999999999976
No 13
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.84 E-value=1.3e-20 Score=120.42 Aligned_cols=89 Identities=19% Similarity=0.332 Sum_probs=77.6
Q ss_pred eEEEEEeeCCC-CCCceeEEEEEeC----CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCCe
Q 035610 29 AIGPANKQGDY-IKTWLRRWFILKQ----GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGGY 102 (144)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~R~fvL~~----~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~~ 102 (144)
+.|||.|+|+. .+.|++|||+|.+ ++|+||++.. +..|.+.|+|..+ .|.+.++ ..+++|||+|.++++
T Consensus 1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~----~~~p~gli~l~~~-~V~~v~ds~~~r~~cFel~~~~~ 75 (98)
T cd01245 1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPK----KTKPIGLIDLSDA-YLYPVHDSLFGRPNCFQIVERAL 75 (98)
T ss_pred CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCC----CCCccceeecccc-EEEEccccccCCCeEEEEecCCC
Confidence 36999999987 8999999999986 8999999988 7889999999996 7666655 357899999998875
Q ss_pred --EEEEEcCCHHHHHHHHHHHHH
Q 035610 103 --TMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 103 --~~~l~a~s~~e~~~Wi~al~~ 123 (144)
.|+++|++ +|+++||++|++
T Consensus 76 ~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 76 PTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CeEEEEeCCH-HHHHHHHHHHhc
Confidence 78888888 999999999986
No 14
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.84 E-value=9.3e-20 Score=115.00 Aligned_cols=88 Identities=27% Similarity=0.503 Sum_probs=76.2
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCC--CcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEE
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGS--TPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMY 105 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~--~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~ 105 (144)
++|||.|+++..+.|++|||+|.++.|.||+++. +. .+.+.|+|..+... . ++ ..+++|.|.+++ +.++
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~----~~~~~~~~~i~l~~~~~~-~-~~--~~~~~F~i~~~~~~~~~ 72 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKS----SMRGKPRGTILLSGAVIS-E-DD--SDDKCFTIDTGGDKTLH 72 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCc----cCCCCceEEEEeceEEEE-E-CC--CCCcEEEEEcCCCCEEE
Confidence 4899999988889999999999999999999987 55 78999999996533 2 22 347999999887 8999
Q ss_pred EEcCCHHHHHHHHHHHHHH
Q 035610 106 SVADTEKEKGERINSIGRA 124 (144)
Q Consensus 106 l~a~s~~e~~~Wi~al~~a 124 (144)
|+|+|.+|+++||.+|+.|
T Consensus 73 ~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 73 LRANSEEERQRWVDALELA 91 (91)
T ss_pred EECCCHHHHHHHHHHHHhC
Confidence 9999999999999999864
No 15
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=3.1e-20 Score=136.39 Aligned_cols=101 Identities=36% Similarity=0.536 Sum_probs=87.8
Q ss_pred ceeecCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610 21 IEFWSQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR 99 (144)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~ 99 (144)
.+.+.+|.++|||.|+|+ +.++|++|||+|.+++|+||.... +..|+|.|+|.+ .+++..++ ..+|+||.|+.
T Consensus 254 thtffnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tT----DKEPrGIIpLeN-lsir~Ved-P~kP~cfEly~ 327 (395)
T KOG0930|consen 254 THTFFNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLEN-LSIREVED-PKKPNCFELYI 327 (395)
T ss_pred hhhccCccccceeeeecCCcccchhheeEEeecceeeeeeecc----CCCCCcceeccc-cceeeccC-CCCCCeEEEec
Confidence 455889999999999976 789999999999999999999888 899999999999 66666665 47999999985
Q ss_pred CC----------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 100 GG----------------------YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 100 ~~----------------------~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
++ ..|.++|.+.+++.+||.+|+.++..
T Consensus 328 ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~ 377 (395)
T KOG0930|consen 328 PSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISR 377 (395)
T ss_pred CCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhcc
Confidence 43 35778999999999999999998863
No 16
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.82 E-value=2.1e-19 Score=114.03 Aligned_cols=92 Identities=24% Similarity=0.385 Sum_probs=75.4
Q ss_pred eEEEEEeeCCC-CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 29 AIGPANKQGDY-IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
++|||.|+++. .+.|++|||+|.++.|.||+++.+. ...+.+.|+|..+.. ....+...++++|.|.++++.|+|+
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~--~~~~~~~i~l~~~~v-~~~~~~~~~~~~f~i~~~~~~~~f~ 77 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDY--DNAHVKEIDLRRCTV-RHNGKQPDRRFCFEVISPTKTWHFQ 77 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCccc--ccccceEEeccceEE-ecCccccCCceEEEEEcCCcEEEEE
Confidence 58999999765 7899999999999999999987611 156778999988543 3333322378999999999999999
Q ss_pred cCCHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGR 123 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ 123 (144)
|+|.+++++|+.+|+.
T Consensus 78 a~s~~~~~~Wi~al~~ 93 (94)
T cd01250 78 ADSEEERDDWISAIQE 93 (94)
T ss_pred CCCHHHHHHHHHHHhc
Confidence 9999999999999986
No 17
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.82 E-value=3.9e-19 Score=113.93 Aligned_cols=79 Identities=15% Similarity=0.186 Sum_probs=70.4
Q ss_pred CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCCeEEEEEcCCHHHHHHHH
Q 035610 40 IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGGYTMYSVADTEKEKGERI 118 (144)
Q Consensus 40 ~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi 118 (144)
...|++|||+|+++.|+||+++. ..+.|+|+|+.+..|....+ ..+.+++|+|.+++++||+.|+|+.|+++||
T Consensus 18 ~~n~KkRwF~Lt~~~L~Y~k~~~-----~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi 92 (98)
T cd01244 18 VLHFKKRYFQLTTTHLSWAKDVQ-----CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWL 92 (98)
T ss_pred CcCCceeEEEECCCEEEEECCCC-----CceeeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHH
Confidence 46999999999999999999774 68999999999888876654 3456799999999999999999999999999
Q ss_pred HHHHH
Q 035610 119 NSIGR 123 (144)
Q Consensus 119 ~al~~ 123 (144)
++|++
T Consensus 93 ~al~k 97 (98)
T cd01244 93 NALEK 97 (98)
T ss_pred HHHhc
Confidence 99986
No 18
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.80 E-value=1.9e-18 Score=111.86 Aligned_cols=89 Identities=25% Similarity=0.342 Sum_probs=67.3
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEe-CCeEEEEecCCCCCCCCCcceEEeCCceEE----EeeccccCCCCceEEEEe---
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILK-QGEHFWFKDSHNITRGSTPRGFIPVGTCLT----VKCAEDVLNKPFAFEHSR--- 99 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~-~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~----v~~~~~~~~~~~~f~I~~--- 99 (144)
+++|||.|+|+..+.|++|||+|+ ++.|.||+++. .....+.++|.+... +...+ ..++++|.|..
T Consensus 2 ~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~----~~~~~~~i~l~~~~v~~~~~~~~~--~~~~~~F~i~~~~~ 75 (102)
T cd01241 2 VKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKP----EDGDPFLPPLNNFSVAECQLMKTE--RPRPNTFIIRCLQW 75 (102)
T ss_pred cEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCC----CccCccccccCCeEEeeeeeeecc--CCCcceEEEEeccC
Confidence 589999999999999999999999 78899888865 333446777776432 21122 25668999972
Q ss_pred ---CCeEEEEEcCCHHHHHHHHHHHHHH
Q 035610 100 ---GGYTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 100 ---~~~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
.++ .|+|+|.+|+++||++|+.+
T Consensus 76 ~~~~~r--~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 76 TTVIER--TFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred CcccCE--EEEeCCHHHHHHHHHHHHhh
Confidence 234 44689999999999999875
No 19
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.79 E-value=6.4e-18 Score=107.86 Aligned_cols=96 Identities=27% Similarity=0.433 Sum_probs=82.2
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-----CCCCceEEEEeCCe
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-----LNKPFAFEHSRGGY 102 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-----~~~~~~f~I~~~~~ 102 (144)
.++|||.+++...+.|++|||+|.++.|.||+++. ......+.+.|+|.++ .+....+. ...+++|.|..+++
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~-~~~~~~~~~~i~l~~~-~v~~~~~~~~~~~~~~~~~f~i~~~~~ 79 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSK-DKSDSKPKGSIPLDDC-TVRPDPSSDFLSNKKRKNCFEITTPNG 79 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTT-TTTESSESEEEEGTTE-EEEEETSSTSTSTSSSSSEEEEEETTS
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCc-cccceeeeEEEEecCc-eEEEcCccccccccCCCcEEEEEeCCC
Confidence 58999999998889999999999999999999985 2234689999999997 44444332 46789999998876
Q ss_pred -EEEEEcCCHHHHHHHHHHHHHHH
Q 035610 103 -TMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 103 -~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
.++|.|+|.+++..|+.+|+.++
T Consensus 80 ~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 80 KSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999986
No 20
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.75 E-value=2.1e-17 Score=109.63 Aligned_cols=96 Identities=23% Similarity=0.378 Sum_probs=75.0
Q ss_pred ceEEEEEe-e-CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec---cccCCCCceEEEEeC--
Q 035610 28 GAIGPANK-Q-GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA---EDVLNKPFAFEHSRG-- 100 (144)
Q Consensus 28 ~~~G~L~k-~-~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~---~~~~~~~~~f~I~~~-- 100 (144)
...|||.. + .++.++|++|||+|+++.|.||+.+. ......|.+.|+|.+|...... .+...++|+|.|...
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~-d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~ 80 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPD-DEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRP 80 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCC-ccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEecc
Confidence 35799986 3 45789999999999999999999776 2334789999999998775432 234689999999631
Q ss_pred C-----------------e-EEEEEcCCHHHHHHHHHHHHHH
Q 035610 101 G-----------------Y-TMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 101 ~-----------------~-~~~l~a~s~~e~~~Wi~al~~a 124 (144)
. + .++|+|+|.+|+++|+.+|+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 81 KMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred cccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 1 2 2568899999999999999863
No 21
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.75 E-value=6.1e-17 Score=104.60 Aligned_cols=97 Identities=20% Similarity=0.117 Sum_probs=79.7
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS 106 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l 106 (144)
+++|+|.|.+...+.|+.|||+|.++.|.|+++... .......++.|+|+++ .|...++ ...+|+|.|.+..++|.+
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~-~v~~~~~-~~~~~~F~I~~~~rsf~l 80 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGM-QVCEGDN-LERPHSFLVSGKQRCLEL 80 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccE-EEEeCCC-CCcCceEEEecCCcEEEE
Confidence 589999999988899999999999999999986421 1123456788999994 4443332 467899999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHHH
Q 035610 107 VADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ai~ 126 (144)
+|+|++|+++||++|+.++.
T Consensus 81 ~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 81 QARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EcCCHHHHHHHHHHHHHHhh
Confidence 99999999999999999885
No 22
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.70 E-value=4.1e-16 Score=97.61 Aligned_cols=85 Identities=18% Similarity=0.361 Sum_probs=71.9
Q ss_pred EEEEee-CCCCCCceeEEEEE--eCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 31 GPANKQ-GDYIKTWLRRWFIL--KQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 31 G~L~k~-~~~~~~w~~R~fvL--~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
|||.|+ ....+.|++|||+| ..+.|.||+++. +...+|+|+|..+ .+... .+...|.|.+....|+|.
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~----~~~~rGsi~v~~a-~is~~----~~~~~I~idsg~~i~hLK 71 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQN----SGKLRGSIDVSLA-VISAN----KKSRRIDIDSGDEIWHLK 71 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCC----CCeeEeEEEccce-EEEec----CCCCEEEEEcCCeEEEEE
Confidence 788887 56788999999999 889999999887 5688999999995 33222 234679999999999999
Q ss_pred cCCHHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGRA 124 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~a 124 (144)
|.|+++.+.|+.+|+.|
T Consensus 72 a~s~~~f~~Wv~aL~~a 88 (89)
T PF15409_consen 72 AKSQEDFQRWVSALQKA 88 (89)
T ss_pred cCCHHHHHHHHHHHHhc
Confidence 99999999999999975
No 23
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.69 E-value=3.7e-16 Score=104.06 Aligned_cols=92 Identities=15% Similarity=0.214 Sum_probs=76.3
Q ss_pred eEEEEEeeCCC-----C-------------CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc--
Q 035610 29 AIGPANKQGDY-----I-------------KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-- 88 (144)
Q Consensus 29 ~~G~L~k~~~~-----~-------------~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-- 88 (144)
++|||.|++++ . ..|++|||+|+++.|.||+++. +..++++|.++....|......
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~----~~~~~~vil~D~~f~v~~~~~~~~ 76 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPS----SAQILDVILFDVDFKVNGGGKEDI 76 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCC----CCceeeEEEEcCCccEEeCCcccc
Confidence 57999888532 1 1699999999999999999987 6789999999877666543321
Q ss_pred ---------CCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 035610 89 ---------LNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 89 ---------~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
....++|.|.+++|+|.|.|+|+.++.+|+++|+.|
T Consensus 77 ~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 77 SLAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred cccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 356699999999999999999999999999999864
No 24
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.66 E-value=4.8e-15 Score=95.27 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=73.0
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
+++|+|.|.++. .-+.|+|+|-++.|.|+...........+++.++|.++ .|...++..+.+|+|+|.++.+.|.++
T Consensus 3 ikEG~L~K~~~k--~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~-~V~~~~~~~~~~~~F~I~~~~ks~~l~ 79 (99)
T cd01220 3 IRQGCLLKLSKK--GLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGM-LTEESEHEWGVPHCFTIFGGQCAITVA 79 (99)
T ss_pred eeEEEEEEEeCC--CCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCce-EEeeccCCcCCceeEEEEcCCeEEEEE
Confidence 589999998753 24556777777777776643201112357899999995 565555544678999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai~ 126 (144)
|.|++|+++||.+|++||.
T Consensus 80 A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 80 ASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred CCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999984
No 25
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.66 E-value=1.8e-15 Score=99.39 Aligned_cols=96 Identities=20% Similarity=0.226 Sum_probs=57.0
Q ss_pred eEEEEEeeCCC-CCCceeEEEEEe-CCeEEEEecCCCC---------CCCCCcceEEeCC----ceEEEeec-cccCCCC
Q 035610 29 AIGPANKQGDY-IKTWLRRWFILK-QGEHFWFKDSHNI---------TRGSTPRGFIPVG----TCLTVKCA-EDVLNKP 92 (144)
Q Consensus 29 ~~G~L~k~~~~-~~~w~~R~fvL~-~~~l~y~k~~~~~---------~~~~~~~~~i~L~----~~~~v~~~-~~~~~~~ 92 (144)
++|||.|.+.. .+.|++|||+|. ++.|.||+.+... .......+.+... ....+... .......
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL 80 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence 68999999876 899999999999 9999999993200 0012222222211 11111101 0112334
Q ss_pred ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 035610 93 FAFEHSRGGYTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 93 ~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
..|.|.++.++|+|.|++.+|+.+||++|++|
T Consensus 81 ~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 81 KVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 77889999999999999999999999999985
No 26
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.66 E-value=2.5e-15 Score=94.39 Aligned_cols=94 Identities=18% Similarity=0.182 Sum_probs=77.7
Q ss_pred ceEEEEEeeCC-C-CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCC---
Q 035610 28 GAIGPANKQGD-Y-IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGG--- 101 (144)
Q Consensus 28 ~~~G~L~k~~~-~-~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~--- 101 (144)
++.|||..... . .+.-++|||||+..+|+||++.. ++.++++|+|++ ..++..++ ...++++|.|..++
T Consensus 2 irkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~e----eKE~kyilpLdn-Lk~Rdve~gf~sk~~~FeLfnpd~rn 76 (110)
T cd01256 2 IRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDE----EKEKKYMLPLDG-LKLRDIEGGFMSRNHKFALFYPDGRN 76 (110)
T ss_pred eeeeeEEeeccceecCCCcceEEEEecceeeeecccc----cccccceeeccc-cEEEeecccccCCCcEEEEEcCcccc
Confidence 57899988753 3 34579999999999999999998 889999999999 56666654 46788999999653
Q ss_pred -----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 102 -----YTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 102 -----~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+++-++|+|.++.+.|...+.+|-+
T Consensus 77 vykd~k~lel~~~~~e~vdswkasflragv 106 (110)
T cd01256 77 VYKDYKQLELGCETLEEVDSWKASFLRAGV 106 (110)
T ss_pred cccchheeeecCCCHHHHHHHHHHHHhccc
Confidence 5667999999999999999888643
No 27
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.64 E-value=1.9e-14 Score=90.47 Aligned_cols=96 Identities=26% Similarity=0.439 Sum_probs=79.1
Q ss_pred ceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc--CCCCceEEEEeCCe-E
Q 035610 28 GAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV--LNKPFAFEHSRGGY-T 103 (144)
Q Consensus 28 ~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~--~~~~~~f~I~~~~~-~ 103 (144)
.++|||.++.. ....|++|||+|.++.|.+|+.+. ......+.+.|+|.++ .+....+. ...+++|.|..+.+ .
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~-~~~~~~~~~~i~l~~~-~v~~~~~~~~~~~~~~f~l~~~~~~~ 79 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEK-AKKDYKPKGSIDLSGI-TVREAPDPDSAKKPHCFEIKTADRRS 79 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCC-ccccCCCceEEECCcC-EEEeCCCCccCCCceEEEEEecCCce
Confidence 57999999976 678999999999999999999876 2112678899999997 54444332 24679999998887 9
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q 035610 104 MYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai 125 (144)
++|.|+|..++..|+.+|+.++
T Consensus 80 ~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 80 YLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred EEEEcCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999875
No 28
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.63 E-value=5.6e-15 Score=95.73 Aligned_cols=92 Identities=16% Similarity=0.236 Sum_probs=66.5
Q ss_pred eEEEEEee------C--CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcce--EEeCCceEEEeeccccCCCCceEEEE
Q 035610 29 AIGPANKQ------G--DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRG--FIPVGTCLTVKCAEDVLNKPFAFEHS 98 (144)
Q Consensus 29 ~~G~L~k~------~--~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~--~i~L~~~~~v~~~~~~~~~~~~f~I~ 98 (144)
++|+|..+ | ...+.|++|||+|+++.|++|+++.+. .....+ .|+|.++ .+...++...++++|.|.
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~--~~~~~~~~~i~l~~~-~i~~~~~~~k~~~~F~l~ 77 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMA--AENVHGEPPVDLTGA-QCEVASDYTKKKHVFRLR 77 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCccc--ccCCCCCCcEeccCC-EEEecCCcccCceEEEEE
Confidence 36787643 1 245799999999999999999987511 112223 6677763 333343334677999997
Q ss_pred eC-CeEEEEEcCCHHHHHHHHHHHHH
Q 035610 99 RG-GYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 99 ~~-~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
.+ ++.|+|+|++.+++.+|+.+|+.
T Consensus 78 ~~~~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 78 LPDGAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhc
Confidence 54 57999999999999999999975
No 29
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.61 E-value=3.3e-14 Score=93.85 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=74.4
Q ss_pred eEEEEEee------CC----CCCCceeEEEEEeCCeEEEEecCCCCCCC---CCcceEEeCCceEEEeeccccCCCCceE
Q 035610 29 AIGPANKQ------GD----YIKTWLRRWFILKQGEHFWFKDSHNITRG---STPRGFIPVGTCLTVKCAEDVLNKPFAF 95 (144)
Q Consensus 29 ~~G~L~k~------~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~---~~~~~~i~L~~~~~v~~~~~~~~~~~~f 95 (144)
++|+|..+ |. +.+.|+++||||+++.|++|+++...... ......|.|..+......+. ..+++.|
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy-~Kr~~VF 80 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDY-SKKPHVF 80 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccceeEeeccc-cCCCcEE
Confidence 57888665 11 24699999999999999999998511111 23457888888663322333 4788999
Q ss_pred EEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 96 EHSRGG-YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 96 ~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.|.+++ +.|+|+|.+.+|++.||.+|+.+...
T Consensus 81 ~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~ 113 (117)
T cd01230 81 RLRTADWREFLFQTSSLKELQSWIERINVVAAA 113 (117)
T ss_pred EEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 999875 89999999999999999999998754
No 30
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.54 E-value=8.1e-14 Score=89.57 Aligned_cols=84 Identities=15% Similarity=0.295 Sum_probs=64.6
Q ss_pred CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC----eEEEEEcCCHHHH
Q 035610 39 YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG----YTMYSVADTEKEK 114 (144)
Q Consensus 39 ~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~----~~~~l~a~s~~e~ 114 (144)
..+.|++|||+|+++.|+||+++.+. ...+...+.|.+|.... ......+.++|.+..+. ++|+|.|+|++++
T Consensus 16 ~~K~~KrrwF~lk~~~L~YyK~kee~--~~~p~i~lnl~gcev~~-dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqy 92 (106)
T cd01237 16 TLKGYKQYWFTFRDTSISYYKSKEDS--NGAPIGQLNLKGCEVTP-DVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQY 92 (106)
T ss_pred hhhhheeEEEEEeCCEEEEEccchhc--CCCCeEEEecCceEEcc-cccccccceEEEEecCCccCCeEEEEECCCHHHH
Confidence 35789999999999999999987611 24566677777755432 22112456888888776 8999999999999
Q ss_pred HHHHHHHHHHH
Q 035610 115 GERINSIGRAI 125 (144)
Q Consensus 115 ~~Wi~al~~ai 125 (144)
.+||++++.|.
T Consensus 93 a~Wmaa~rlas 103 (106)
T cd01237 93 AKWMAACRLAS 103 (106)
T ss_pred HHHHHHHHHhh
Confidence 99999999864
No 31
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.53 E-value=1.5e-13 Score=85.59 Aligned_cols=93 Identities=25% Similarity=0.417 Sum_probs=74.8
Q ss_pred eEEEEEeeCCCC-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEEE
Q 035610 29 AIGPANKQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMYS 106 (144)
Q Consensus 29 ~~G~L~k~~~~~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~l 106 (144)
++|||.++.... +.|++|||+|.++.|.+|+... ......+.+.|+|.+ ..+....+....+++|.|...+ +.++|
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~-~~~~~~~~~~i~l~~-~~v~~~~~~~~~~~~f~i~~~~~~~~~~ 78 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKS-SKKSYKPKGSIPLSG-AEVEESPDDSGRKNCFEIRTPDGRSYLL 78 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCC-CCcCCCCcceEEcCC-CEEEECCCcCCCCcEEEEecCCCcEEEE
Confidence 469998887554 7899999999999999999876 100267899999999 4544444323467999999877 89999
Q ss_pred EcCCHHHHHHHHHHHHH
Q 035610 107 VADTEKEKGERINSIGR 123 (144)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ 123 (144)
.|+|..++..|+.+|+.
T Consensus 79 ~~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 79 QAESEEEREEWIEALQS 95 (96)
T ss_pred EeCCHHHHHHHHHHHhc
Confidence 99999999999999986
No 32
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.51 E-value=8.1e-13 Score=82.77 Aligned_cols=90 Identities=27% Similarity=0.375 Sum_probs=73.5
Q ss_pred EEEEEeeCCCC----CCceeEEEEEeCCeEEEEecCCCCCCCCCcc-eEEeCCceEEEeeccccCCCCceEEEEeC---C
Q 035610 30 IGPANKQGDYI----KTWLRRWFILKQGEHFWFKDSHNITRGSTPR-GFIPVGTCLTVKCAEDVLNKPFAFEHSRG---G 101 (144)
Q Consensus 30 ~G~L~k~~~~~----~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~-~~i~L~~~~~v~~~~~~~~~~~~f~I~~~---~ 101 (144)
+|||.+++... +.|++|||+|.++.|.+|+.+. ..... +.+++.... +....+..+.+++|.|... .
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~----~~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~ 76 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDD----KKEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRGR 76 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCC----CCcCCCCEEEccceE-EEECCCCCCCCceEEEECCCCCc
Confidence 68998887543 7999999999999999999986 44444 688998866 5544432356799999977 7
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHH
Q 035610 102 YTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 102 ~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
+.++|.|+|.++++.|+.+|+.+
T Consensus 77 ~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 77 RVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred EEEEEEcCCHHHHHHHHHHHhcC
Confidence 89999999999999999999863
No 33
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.42 E-value=9.8e-12 Score=80.40 Aligned_cols=97 Identities=18% Similarity=0.073 Sum_probs=76.0
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
+++|-|.|.. .+.-+.|+|.|-++.|.|-+... ..+....++.++|.++ .|....+....+|+|.|.++.++|.++
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~-~~~~~~~~~~i~L~~~-~v~~~~d~~~~~n~f~I~~~~kSf~v~ 80 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVI-SKKKYNKQHILPLEGV-QVESIEDDGIERNGWIIKTPTKSFAVY 80 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEecCEEEEEEeec-CCceeeEeeEEEccce-EEEecCCcccccceEEEecCCeEEEEE
Confidence 4689998886 34567799999999999965421 1113456789999995 444454434678999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhc
Q 035610 108 ADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|+|.+|+.+|+++|..|+.+.
T Consensus 81 A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 81 AATETEKREWMLHINKCVTDL 101 (104)
T ss_pred cCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999764
No 34
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.37 E-value=2.4e-11 Score=80.62 Aligned_cols=96 Identities=22% Similarity=0.363 Sum_probs=62.4
Q ss_pred eEEEEEee------CC----CCCCceeEEEEEeCCeEEEEecCCC-----CC-----CCCCcceEEeCCceEEEeecccc
Q 035610 29 AIGPANKQ------GD----YIKTWLRRWFILKQGEHFWFKDSHN-----IT-----RGSTPRGFIPVGTCLTVKCAEDV 88 (144)
Q Consensus 29 ~~G~L~k~------~~----~~~~w~~R~fvL~~~~l~y~k~~~~-----~~-----~~~~~~~~i~L~~~~~v~~~~~~ 88 (144)
++|+|..+ |. ..+.|+..|+||+++.|++|+++.. .. ....+...|.|..+.... +.+=
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~-a~dY 80 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEI-ASDY 80 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEE-ETTB
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEe-Cccc
Confidence 68999775 11 3468999999999999999998421 00 112344568999865544 4333
Q ss_pred CCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 89 LNKPFAFEHSRG-GYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 89 ~~~~~~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
.+++|+|.|.+. +..|+|+|.|.++|.+||++|.-+.
T Consensus 81 ~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 81 TKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp TTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred ccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 469999999976 5799999999999999999998753
No 35
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.23 E-value=3.2e-11 Score=76.59 Aligned_cols=93 Identities=19% Similarity=0.292 Sum_probs=70.7
Q ss_pred ceEEEEEeeCC-CCCCceeEEEEEeCCe-----EEEEecCCCCCCCCCcceEEeCCceEEEeecccc----------CCC
Q 035610 28 GAIGPANKQGD-YIKTWLRRWFILKQGE-----HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV----------LNK 91 (144)
Q Consensus 28 ~~~G~L~k~~~-~~~~w~~R~fvL~~~~-----l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~----------~~~ 91 (144)
.++|||.+.|+ ..+.|++|||+|.+-. +..|+.+ ...|...+.|++-+. -..++. .+.
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ek-----ks~P~e~~qldGyTv-Dy~~~~~~~~~~~~~~~gg 76 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREK-----KAEPTEFIQLDGYTV-DYMPESDPDPNSELSLQGG 76 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhh-----cCCchhheeecceEE-eccCCCCCCcccccccccc
Confidence 47999999997 7899999999999744 3345544 577899999999554 222221 134
Q ss_pred CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 92 PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 92 ~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
++-|..+-.+....|+++++.|+.-|+++|-+|.-
T Consensus 77 ~~ff~avkegd~~~fa~~de~~r~lwvqa~yratg 111 (117)
T cd01234 77 RHFFNAVKEGDELKFATDDENERHLWVQAMYRATG 111 (117)
T ss_pred hhhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence 45666666778899999999999999999988763
No 36
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.22 E-value=2.1e-10 Score=74.36 Aligned_cols=93 Identities=14% Similarity=0.123 Sum_probs=75.8
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc----CCCCceEEEEeCCeE
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV----LNKPFAFEHSRGGYT 103 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~----~~~~~~f~I~~~~~~ 103 (144)
.+||||---...-+.|||+|++|..+.|.+|.++. .......|+|+.+..|...... ...+|||+|.+.+..
T Consensus 1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~----~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~v 76 (117)
T cd01239 1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEES----GSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNV 76 (117)
T ss_pred CccceEEEEecCccceeeeEEEecCCeEEEEEcCC----CCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEEecCEE
Confidence 47999977665557899999999999999999988 8889999999999888754321 356799999999999
Q ss_pred EEEEcC--------------------CHHHHHHHHHHHHHH
Q 035610 104 MYSVAD--------------------TEKEKGERINSIGRA 124 (144)
Q Consensus 104 ~~l~a~--------------------s~~e~~~Wi~al~~a 124 (144)
||...+ ....++.|-.||++|
T Consensus 77 Y~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 77 YFVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred EEecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 998543 345668899999874
No 37
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.22 E-value=3.8e-12 Score=106.68 Aligned_cols=96 Identities=18% Similarity=0.306 Sum_probs=83.7
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeC--CeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEeCCe
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQ--GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSRGGY 102 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~--~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~~~~ 102 (144)
+...+|+|.|+|...+.|+.|||||.. .+|+||.+-. +..|.|+|+|.....|... .+.++.+--|.+.+..+
T Consensus 1633 Nr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~e----dt~pkG~IdLaevesv~~~~~k~vdekgffdlktt~r 1708 (1732)
T KOG1090|consen 1633 NRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFE----DTKPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNR 1708 (1732)
T ss_pred ccCcccchhhcchhhcccccceeEecCCccceeeecccc----cccccchhhhhhhhhhcccCccccCccceeeeehhhH
Confidence 455699999999999999999999986 5699999887 8899999999987666543 33456777899999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHH
Q 035610 103 TMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
.|.|+|.+...+++|++.|++++
T Consensus 1709 vynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1709 VYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred HHHHHhccchHHHHHHHHHHHhh
Confidence 99999999999999999999986
No 38
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=1.8e-11 Score=93.06 Aligned_cols=98 Identities=21% Similarity=0.265 Sum_probs=68.6
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEe-CCeEEEEecCCCCCCC-CCcceEEeCCceEEEeeccccCCCCceEEEEeC---
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILK-QGEHFWFKDSHNITRG-STPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG--- 100 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~-~~~l~y~k~~~~~~~~-~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~--- 100 (144)
+.+++|||+|+|...++|+.|||+|. ++.|.-|+.+....+. ..|...+.+..|..+.. ...+||.|-|..-
T Consensus 14 ~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~---erPrPntFiiRcLQWT 90 (516)
T KOG0690|consen 14 DVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKT---ERPRPNTFIIRCLQWT 90 (516)
T ss_pred hhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhc---cCCCCceEEEEeeeee
Confidence 55699999999999999999999997 4788889987621111 12333333444333321 1367899998742
Q ss_pred -CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 101 -GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 101 -~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
--.-.|.++|.+++++|+.||+.+.+
T Consensus 91 TVIERTF~ves~~eRq~W~~AIq~vsn 117 (516)
T KOG0690|consen 91 TVIERTFYVESAEERQEWIEAIQAVSN 117 (516)
T ss_pred eeeeeeeecCCHHHHHHHHHHHHHHhh
Confidence 22334679999999999999998654
No 39
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.16 E-value=1e-09 Score=71.85 Aligned_cols=98 Identities=16% Similarity=0.112 Sum_probs=73.5
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC---C----CCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN---I----TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG 100 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~---~----~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~ 100 (144)
+++|-|.|-+...+..+.|+|.|-++.|.|.+.... . ......+..++|.. ..|...++....+|+|.|.+.
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~-~~V~d~~d~~~~knaF~I~~~ 83 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRK-VDINDKPDSSEYKNAFEIILK 83 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeee-eEEEEcCCCcccCceEEEEcC
Confidence 478999888755577899999999999999886540 0 00123356678887 344444443346899999975
Q ss_pred -CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 101 -GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 101 -~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
.+.+.|+|.|++++.+||++|..++.
T Consensus 84 ~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 84 DGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 67899999999999999999998774
No 40
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.13 E-value=3.4e-09 Score=68.39 Aligned_cols=96 Identities=14% Similarity=0.262 Sum_probs=72.4
Q ss_pred eEEEEEeeC--CC--CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc-------ccCCCCceEEE
Q 035610 29 AIGPANKQG--DY--IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-------DVLNKPFAFEH 97 (144)
Q Consensus 29 ~~G~L~k~~--~~--~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~-------~~~~~~~~f~I 97 (144)
.||||.... +. -+.|.++|.||.+..|++|..+. ......+...++++....|.... +..+-|..|+|
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~-~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I 80 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQ-DKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQI 80 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCc-cccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEEE
Confidence 689997653 22 25899999999999999999875 22234577788887644443321 22467889999
Q ss_pred EeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 98 SRGG--YTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 98 ~~~~--~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
...+ +++++.|++..|.+.|+.+|.+-|
T Consensus 81 ~~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 81 LYANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred EeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 8654 889999999999999999998865
No 41
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=99.10 E-value=3.2e-09 Score=68.57 Aligned_cols=89 Identities=20% Similarity=0.182 Sum_probs=66.7
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEE
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTM 104 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~ 104 (144)
...+.|.+.|+.+.. .++|+|+|+++ .|+|+.... ....|.|+++....+... ....|.|.+++++|
T Consensus 12 ~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~-----~~~KGeI~~~~~l~v~~k-----~~~~F~I~tp~RtY 79 (104)
T PF14593_consen 12 LILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKK-----MVLKGEIPWSKELSVEVK-----SFKTFFIHTPKRTY 79 (104)
T ss_dssp -EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT-----TEEEEEE--STT-EEEEC-----SSSEEEEEETTEEE
T ss_pred eEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCC-----CeECcEEecCCceEEEEc-----cCCEEEEECCCcEE
Confidence 345899999998765 99999999987 788877764 467799999986666433 22579999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHh
Q 035610 105 YSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 105 ~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
+|.. ....+..|+++|+.++.+
T Consensus 80 ~l~d-~~~~A~~W~~~I~~~~~~ 101 (104)
T PF14593_consen 80 YLED-PEGNAQQWVEAIEEVKKQ 101 (104)
T ss_dssp EEE--TTS-HHHHHHHHHHHHHH
T ss_pred EEEC-CCCCHHHHHHHHHHHHHH
Confidence 9876 455588899999998754
No 42
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=99.06 E-value=2.5e-10 Score=93.05 Aligned_cols=95 Identities=19% Similarity=0.231 Sum_probs=80.1
Q ss_pred eEEEEEeeCC-----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCCe
Q 035610 29 AIGPANKQGD-----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGGY 102 (144)
Q Consensus 29 ~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~~ 102 (144)
++|.|.++.. +.+.+|+|||-|+...|.|.|++. ..+.+.|+|.++..|...++ ..+.+|+|+|+.+++
T Consensus 567 k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~-----~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~dr 641 (800)
T KOG2059|consen 567 KEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPG-----KQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTDR 641 (800)
T ss_pred cccceEeccccccchhhhhhhheEEEeccceeEEecCCc-----cCcccceeHHHHHHHHHhhhhccCCCceEEEEecCc
Confidence 4566666531 235899999999999999999984 78999999999888876655 578899999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 103 TMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+.|++|.+-.|.++|+++|+++....
T Consensus 642 tly~Q~~n~vEandWldaL~kvs~~N 667 (800)
T KOG2059|consen 642 TLYVQAKNCVEANDWLDALRKVSCCN 667 (800)
T ss_pred ceeEecCCchHHHHHHHHHHHHhccC
Confidence 99999999999999999999965443
No 43
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=99.04 E-value=5.5e-10 Score=93.38 Aligned_cols=101 Identities=23% Similarity=0.334 Sum_probs=80.7
Q ss_pred CCceEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEE--Eeecc-ccCCCCceEEEEeC
Q 035610 26 QPGAIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLT--VKCAE-DVLNKPFAFEHSRG 100 (144)
Q Consensus 26 ~~~~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~--v~~~~-~~~~~~~~f~I~~~ 100 (144)
+....|||+.- +.+++.|+||||+|.++.+.|++.+. .++.+.+.+.|+|..|+. +..+. +...++|.|.|...
T Consensus 989 dVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~Pd-DEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~ 1067 (1116)
T KOG3640|consen 989 DVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPD-DEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVW 1067 (1116)
T ss_pred ceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcc-hhcccCcceeeehhhhhccccccchhhhccCCceeEEEee
Confidence 55678998775 45677899999999999999999876 555778999999999987 43332 34688899999821
Q ss_pred -------------Ce-EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 101 -------------GY-TMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 101 -------------~~-~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.+ ...|+|+|.++++.|+.+|..++..
T Consensus 1068 rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~ 1108 (1116)
T KOG3640|consen 1068 RPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQ 1108 (1116)
T ss_pred cccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHH
Confidence 13 5678999999999999999997753
No 44
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.00 E-value=2.7e-08 Score=65.19 Aligned_cols=96 Identities=16% Similarity=0.234 Sum_probs=69.0
Q ss_pred ceEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeC-CceEEEeecc-------ccCCCCceE
Q 035610 28 GAIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPV-GTCLTVKCAE-------DVLNKPFAF 95 (144)
Q Consensus 28 ~~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L-~~~~~v~~~~-------~~~~~~~~f 95 (144)
..||||... ++..+.|.++|.||.+..|++|..+... .+...+.-.+++ ++...|+... +..+-|+.|
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If 82 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIF 82 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEE
Confidence 478999765 3445699999999999999999976511 111334566777 3444444321 124667899
Q ss_pred EEEe-------CCeEEEEEcCCHHHHHHHHHHHHH
Q 035610 96 EHSR-------GGYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 96 ~I~~-------~~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
+|.+ +..+.++-|+|..|+++|+.+|..
T Consensus 83 ~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~ 117 (122)
T cd01243 83 RVTTSQISASSSKCSTLMLADTEEEKSKWVGALSE 117 (122)
T ss_pred EEEEecccCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence 9984 346788999999999999999987
No 45
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.88 E-value=3.4e-08 Score=63.47 Aligned_cols=92 Identities=15% Similarity=0.253 Sum_probs=58.7
Q ss_pred eEEEEEeeCC--CCCCceeEEEEEeCC-eEE-E--EecCC-CC-CCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC
Q 035610 29 AIGPANKQGD--YIKTWLRRWFILKQG-EHF-W--FKDSH-NI-TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG 100 (144)
Q Consensus 29 ~~G~L~k~~~--~~~~w~~R~fvL~~~-~l~-y--~k~~~-~~-~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~ 100 (144)
++|||..+.+ ....|.+.||....+ .++ + +.... .. .........|.|..|. ++..+. .++++||+|.++
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~-~r~~~~-~dRRFCFei~~~ 78 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCS-RRKTES-IDKRFCFDVEVE 78 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeecc-ccccCC-ccceeeEeeeec
Confidence 5799999853 334899999988763 332 1 22210 00 0011122345555543 333333 588999999876
Q ss_pred Ce--EEEEEcCCHHHHHHHHHHHH
Q 035610 101 GY--TMYSVADTEKEKGERINSIG 122 (144)
Q Consensus 101 ~~--~~~l~a~s~~e~~~Wi~al~ 122 (144)
.+ ++.|+|+|+.++..||+|+.
T Consensus 79 ~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 79 EKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred CCCCeEEEEecCHHHHHHHHHhhc
Confidence 55 88999999999999999975
No 46
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=98.82 E-value=1.3e-09 Score=87.45 Aligned_cols=124 Identities=22% Similarity=0.308 Sum_probs=95.4
Q ss_pred CcccccccCCCCCCCCCCCceeecCCceEEEEEee-CC--CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCc
Q 035610 2 ENVWRASSGQDPNPVDYKGIEFWSQPGAIGPANKQ-GD--YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGT 78 (144)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~k~-~~--~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~ 78 (144)
.|.|---++..|.... ..++....|..||.|.-+ |. +.+.|+-|||.|.+..|.|-+... +..+-...|+|..
T Consensus 711 ~N~W~Cf~CnnPeKa~-yFvn~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s---~~dS~~~~IDl~~ 786 (851)
T KOG3723|consen 711 ANAWQCFMCNNPEKAT-YFVNQDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKS---KDDSDDCPIDLSK 786 (851)
T ss_pred cCccceeecCChHHee-eeecCCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCC---CCCCCCCCccHHH
Confidence 4778888888776655 556667788999999655 42 568999999999999999877543 1233347799999
Q ss_pred eEEEeeccc---cCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 79 CLTVKCAED---VLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 79 ~~~v~~~~~---~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+.+|+.... ...-+..|+|.+.++++.+.|.+++.+++|++.|+-++....
T Consensus 787 IRSVk~v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~ 840 (851)
T KOG3723|consen 787 IRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAK 840 (851)
T ss_pred hhhHHHHHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHH
Confidence 888763321 134467899999999999999999999999999998876543
No 47
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.80 E-value=3.7e-08 Score=63.72 Aligned_cols=93 Identities=15% Similarity=0.214 Sum_probs=64.1
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCc---ceEEeCCceEEEeecc--c--cCCCCceEEEEeCC
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTP---RGFIPVGTCLTVKCAE--D--VLNKPFAFEHSRGG 101 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~---~~~i~L~~~~~v~~~~--~--~~~~~~~f~I~~~~ 101 (144)
.+|+|+.+..+-++|+++||+|+...|+|.-... ...+ .....+++........ . .....++|.|..+.
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgk----sk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~ 77 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEK----TKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVG 77 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCC----cCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccc
Confidence 5899999988889999999999999998765443 2223 2444555543322221 1 12344888886321
Q ss_pred -------eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 102 -------YTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 102 -------~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
...+|+|+++..+..|+.+|+-+-
T Consensus 78 ~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~K 108 (114)
T cd01259 78 DQSKGSQSIKYLCAEDLPTLDRWLTAIRIAK 108 (114)
T ss_pred cCcccchhheeeccCCHHHHHHHHHHHHHHh
Confidence 234789999999999999999764
No 48
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=98.80 E-value=4.9e-08 Score=80.63 Aligned_cols=101 Identities=14% Similarity=0.013 Sum_probs=77.8
Q ss_pred CCceEEEEEeeCC---CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCC--CceEEEEe
Q 035610 26 QPGAIGPANKQGD---YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNK--PFAFEHSR 99 (144)
Q Consensus 26 ~~~~~G~L~k~~~---~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~--~~~f~I~~ 99 (144)
...++|||..-|. +....++|||||.++.+.|||.+. .. ...|..+..++++..|.+.-. ...+ -+.|.|+.
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P-~~-~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn 80 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKP-QD-NQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 80 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCC-cc-ccccceeeccCCCceEeecCceEEcCceEEEEEEec
Confidence 3568999988763 456789999999999999999865 21 367888888888777765422 1222 26777774
Q ss_pred ---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 100 ---GGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 100 ---~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.++...+.|.+.+|+.+|+++|+.|+.++
T Consensus 81 ~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 81 KKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred CCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 45788899999999999999999999864
No 49
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.68 E-value=2e-07 Score=75.05 Aligned_cols=100 Identities=16% Similarity=0.136 Sum_probs=67.7
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEe-C
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSR-G 100 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~-~ 100 (144)
..+....||+.+.+... .|++|||.+.++.+....... ..........+.+.....+.+.. ....++++|.|.+ .
T Consensus 374 ~sDv~~~G~l~k~~~~~-~wk~ry~~l~~~~l~~~~~~~-~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~ 451 (478)
T PTZ00267 374 TSDVTHGGYLYKYSSDM-RWKKRYFYIGNGQLRISLSEN-PENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNN 451 (478)
T ss_pred cCCcccceEEeccCCCc-chhhheEEecCCceEEEeccc-cccCCCCCccccHHHhcccccccHHhcCCCCceEEEEecC
Confidence 44677899999988655 499999999988776543322 00112222333343333333331 1245789999975 4
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 101 GYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 101 ~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
.+.+++.|+|++++++||.+|+.++
T Consensus 452 ~~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 452 GQKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred CcEEEEecCChHHHHHHHHHHHHHh
Confidence 6788888999999999999999976
No 50
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=98.66 E-value=2.9e-08 Score=63.70 Aligned_cols=96 Identities=14% Similarity=0.125 Sum_probs=72.9
Q ss_pred CCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-CeE
Q 035610 26 QPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-GYT 103 (144)
Q Consensus 26 ~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~~~ 103 (144)
++...|++.|.|+ +...|++|||-|..+.|-++... .......|.+..+..|.......+..+|+.|... ++.
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~-----~~~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k 76 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGES-----EANKPELITMDQIEDVSVEFQQIKEENCILLKIRDEKK 76 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccc-----cccCCcEEEeehhhhcchhheeeccCceEEEEEcCCce
Confidence 5678999999975 77899999999999999986433 2344556666665555433233466688888854 678
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHH
Q 035610 104 MYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+++.+++..+..+|...|+.+..
T Consensus 77 ~vlt~~d~i~l~qW~~elr~a~r 99 (116)
T cd01240 77 IVLTNSDEIELKQWKKELRDAHR 99 (116)
T ss_pred EEEecCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999998754
No 51
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.64 E-value=2e-06 Score=55.85 Aligned_cols=95 Identities=13% Similarity=-0.015 Sum_probs=67.8
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEEEeCC
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEHSRGG 101 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I~~~~ 101 (144)
..+|-|.+.+.-.+.=+.|+|.|-++.|.|.|...-......-++.|++..+..+ ..++. ....|+|.|+...
T Consensus 3 i~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~-d~~Dg~~~~~~~~~knafkl~~~~ 81 (109)
T cd01224 3 FLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVV-NIRDGKMFSSGHTIKNSLKIYSES 81 (109)
T ss_pred eEeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEE-ECCCCccccCCceeEEEEEEEEcC
Confidence 4678888776322233679999999999999964301112445789999995554 33321 1236999999654
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHH
Q 035610 102 --YTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 102 --~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
..|.|+|.|.++...|++||..
T Consensus 82 ~~~~~~f~~Kt~e~K~~Wm~a~~~ 105 (109)
T cd01224 82 TDEWYLFSFKSAERKHRWLSAFAL 105 (109)
T ss_pred CCeEEEEEECCHHHHHHHHHHHHH
Confidence 6789999999999999999976
No 52
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.64 E-value=2e-07 Score=60.48 Aligned_cols=92 Identities=21% Similarity=0.254 Sum_probs=65.0
Q ss_pred EEEEeeC---C-CCCCceeEEEEEeCCeEEEEecCCCCCCC--CCcceEEeCC--ceEEEeeccccC---CCCceEEEEe
Q 035610 31 GPANKQG---D-YIKTWLRRWFILKQGEHFWFKDSHNITRG--STPRGFIPVG--TCLTVKCAEDVL---NKPFAFEHSR 99 (144)
Q Consensus 31 G~L~k~~---~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~--~~~~~~i~L~--~~~~v~~~~~~~---~~~~~f~I~~ 99 (144)
|||..+- + ..+.|+.+|++|+++.|+.|+... .+.. ..|..+.+|- -...+....... +++++|.|.+
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P-~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irt 81 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPP-LSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRT 81 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCCC-CCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEc
Confidence 8887772 1 357999999999999999999876 2111 2344455554 212232222222 6779999997
Q ss_pred CC--eEEEEEcCCHHHHHHHHHHHHH
Q 035610 100 GG--YTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 100 ~~--~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
.. ..++|..++..|+..|..+|++
T Consensus 82 g~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 82 GTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred CCceeeEEEEecCHHHHHHHHHHHhc
Confidence 65 6889999999999999999975
No 53
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.57 E-value=1.9e-06 Score=55.12 Aligned_cols=94 Identities=10% Similarity=-0.071 Sum_probs=68.0
Q ss_pred eEEEEEeeCCCCCCc-eeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 29 AIGPANKQGDYIKTW-LRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w-~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
.+|-|..-......- ++..+.|-++.|.|-.... .+......+++|.+... ....+....+|+|.|.++.+++.++
T Consensus 4 ~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~--~~ky~~~~~~~L~~i~V-~ni~D~~~~kNafki~t~~~s~i~q 80 (100)
T cd01226 4 LYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINA--AGKYVMESTYSLNSVAV-VNVKDRENAKKVLKLLIFPESRIYQ 80 (100)
T ss_pred EcCcEEEechhhCCccceEEEEEeccEEEEEEecc--cceEEEEEEEehHHeEE-EecCCCcCcCceEEEEeCCccEEEE
Confidence 455555554333333 4455888888888765432 12455678899999544 4444445678999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGRAI 125 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai 125 (144)
|+|.++..+|++.|++|.
T Consensus 81 aes~~~K~eWl~~le~a~ 98 (100)
T cd01226 81 CESARIKTEWFEELEQAK 98 (100)
T ss_pred eCCHHHHHHHHHHHHHHh
Confidence 999999999999999986
No 54
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.51 E-value=6.1e-08 Score=81.80 Aligned_cols=103 Identities=22% Similarity=0.315 Sum_probs=78.5
Q ss_pred CCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEE
Q 035610 26 QPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTM 104 (144)
Q Consensus 26 ~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~ 104 (144)
.....|+|.++.. ..+.|.+|||...++.+.|+..-. ........+|..| .|+...+...+++||+|+++.++|
T Consensus 273 ~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~----~~~~~~~~dL~~c-svk~~~~~~drr~CF~iiS~tks~ 347 (785)
T KOG0521|consen 273 GYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGA----DAENVLIEDLRTC-SVKPDAEQRDRRFCFEIISPTKSY 347 (785)
T ss_pred hhhhhhhhhhhcccchhhHHhhhhhhhccccccccccc----cccccccccchhc-cccCCcccccceeeEEEecCCcce
Confidence 4446788888754 478999999999988888776543 2222566677774 444444445788999999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhcCCCCC
Q 035610 105 YSVADTEKEKGERINSIGRAIVQHSRSVT 133 (144)
Q Consensus 105 ~l~a~s~~e~~~Wi~al~~ai~~~~~~~~ 133 (144)
.++|+++.+..+||.+|+..+...-.+..
T Consensus 348 ~lQAes~~d~~~Wi~~i~nsi~s~l~~~~ 376 (785)
T KOG0521|consen 348 LLQAESEKDCQDWISALQNSILSALNSAF 376 (785)
T ss_pred EEecCchhHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999998876544333
No 55
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.47 E-value=3.5e-06 Score=52.62 Aligned_cols=85 Identities=18% Similarity=0.150 Sum_probs=64.3
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCc-eEEEeeccccCCCCceEEEEeCCeEEE
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGT-CLTVKCAEDVLNKPFAFEHSRGGYTMY 105 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~-~~~v~~~~~~~~~~~~f~I~~~~~~~~ 105 (144)
.+.|.+.|+.+. .+++|=++|.+. .|.|.... ....+|.|+++. ...+... ....|.|.+++++|+
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~-----~~~~KgeIp~s~~~l~v~~~-----~~~~F~I~Tp~rty~ 69 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPV-----KKVVKGEIPWSDVELRVEVK-----NSSHFFVHTPNKVYS 69 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEcCC-----cCeEEeEecccccceEEEEe-----cCccEEEECCCceEE
Confidence 467889888775 569999999985 56665554 467889999998 5444322 236799999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHH
Q 035610 106 SVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 106 l~a~s~~e~~~Wi~al~~ai 125 (144)
|. +....+..|+.+|..+.
T Consensus 70 le-D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 70 FE-DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred EE-CCCCCHHHHHHHHHHHh
Confidence 95 44578899999998753
No 56
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.41 E-value=1.3e-05 Score=51.99 Aligned_cols=95 Identities=17% Similarity=0.114 Sum_probs=68.4
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEEEE
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMYSV 107 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~l~ 107 (144)
.-+-+..+.....-=..||++|-...|.+..... ......-.|.++|.+ ..|...++..+.+++|+|..+- ....+.
T Consensus 14 ~mS~V~~~~~~~qe~~eRyLvLFp~~LlilS~s~-r~sGf~yqGkLPL~~-i~v~~lEd~e~~~~aFeI~G~li~~i~v~ 91 (111)
T cd01225 14 HMSQVAVQYGAGEEKRERYLVLFPNVLLMLSASP-RMSGFIYQGKLPLTG-IIVTRLEDTEALKNAFEISGPLIERIVVV 91 (111)
T ss_pred EEEEEEEecCCccccceeEEEEcCceEEEEEcCC-CccceEEeeeecccc-cEEechHhccCccceEEEeccCcCcEEEE
Confidence 3344444433444557899999999999887643 112344578999999 4555555544778999999664 677888
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGRAI 125 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai 125 (144)
|.+.+|..+|+..|++-+
T Consensus 92 C~~~~e~~~Wl~hL~~~~ 109 (111)
T cd01225 92 CNNPQDAQEWVELLNANN 109 (111)
T ss_pred eCCHHHHHHHHHHHHhhc
Confidence 999999999999999843
No 57
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.39 E-value=1.7e-05 Score=50.71 Aligned_cols=90 Identities=17% Similarity=0.100 Sum_probs=65.1
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC---eE
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG---YT 103 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~---~~ 103 (144)
-.++|.+...+. =+.|++.|-+..|.+.+... ....-+..|.++.. .+....+ +.+++|.|.... ..
T Consensus 4 Llleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~---~~y~~K~~i~~~~l-~i~e~~~--~d~~~F~v~~~~~p~~~ 73 (97)
T cd01222 4 LLLEGRFREHGG----GKPRLLFLFQTMLLIAKPRG---DKYQFKAYIPCKNL-MLVEHLP--GEPLCFRVIPFDDPKGA 73 (97)
T ss_pred eeeeceEEeecC----CCceEEEEecccEEEEEecC---CeeEEEEEEEecce-EEecCCC--CCCcEEEEEecCCCceE
Confidence 346777764442 34699999999999988754 23455667777773 3332222 347999998543 68
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHH
Q 035610 104 MYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+.++|.|.+++..|+++|+.++-
T Consensus 74 ~~l~A~s~e~K~~W~~~i~~~i~ 96 (97)
T cd01222 74 LQLTARNREEKRIWTQQLKRAML 96 (97)
T ss_pred EEEEecCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999873
No 58
>PLN02866 phospholipase D
Probab=98.38 E-value=1.1e-05 Score=69.57 Aligned_cols=101 Identities=15% Similarity=0.213 Sum_probs=74.7
Q ss_pred cCCceEEEEEee------CC-----C---------CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceE----
Q 035610 25 SQPGAIGPANKQ------GD-----Y---------IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCL---- 80 (144)
Q Consensus 25 ~~~~~~G~L~k~------~~-----~---------~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~---- 80 (144)
..-.+||++.|+ |+ . ...|.+|||+|+.+.|.|..++. +..++.++.++...
T Consensus 180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~----~~~~~~v~lfD~~~~~~~ 255 (1068)
T PLN02866 180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPF----DAKPLDIIVFDVLPASNG 255 (1068)
T ss_pred CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCC----CCceeEEEEEeccccccc
Confidence 355689999998 21 0 13699999999999999997776 56677777666322
Q ss_pred ----EEeeccc---cCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 81 ----TVKCAED---VLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 81 ----~v~~~~~---~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
.+..+.. .....++|.|...++.+.+.|.|...+..|+.+|+.+..++.
T Consensus 256 ~~~~~~~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~~ 311 (1068)
T PLN02866 256 NGEGQISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRPP 311 (1068)
T ss_pred CCCcceeecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhccC
Confidence 1111111 124468999999999999999999999999999999875443
No 59
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=98.37 E-value=2e-05 Score=52.48 Aligned_cols=97 Identities=10% Similarity=0.017 Sum_probs=66.6
Q ss_pred eEEEEEeeCCC-----CCCceeEEEEEeC--CeEEEEecCCC-CCCCCCcceEEeCCceEEEeecccc--CC----CCce
Q 035610 29 AIGPANKQGDY-----IKTWLRRWFILKQ--GEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDV--LN----KPFA 94 (144)
Q Consensus 29 ~~G~L~k~~~~-----~~~w~~R~fvL~~--~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~--~~----~~~~ 94 (144)
.-.||.|-+.. .+..++|||-|.. .+|++...++. ..........+.|..+..|.+.... .. ..++
T Consensus 11 ~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~s 90 (123)
T PF12814_consen 11 IGEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKS 90 (123)
T ss_pred cccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccceE
Confidence 44678885432 3588999999987 56777664421 0111223356778876666544221 11 3477
Q ss_pred EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 95 FEHSRGGYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 95 f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
|.|.++++.+-|.|++.++.+-|+.+|+-.+
T Consensus 91 i~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~ 121 (123)
T PF12814_consen 91 IIIVTPDRSLDLTAPSRERHEIWFNALRYLL 121 (123)
T ss_pred EEEEcCCeEEEEEeCCHHHHHHHHHHHHHHh
Confidence 8888999999999999999999999998754
No 60
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=98.29 E-value=2e-06 Score=69.34 Aligned_cols=103 Identities=19% Similarity=0.109 Sum_probs=76.8
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCe
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGY 102 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~ 102 (144)
....+|+|-|.|.....++-..||++|-++.+.|.+.... .......+..+.+.++. +...+ ....++.|.+..+.+
T Consensus 269 sreLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~-v~~~~-~~~~~~tF~~~G~~r 346 (623)
T KOG4424|consen 269 SRELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQ-VQEDD-NEELPHTFILTGKKR 346 (623)
T ss_pred HHHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcch-hcccc-cccCCceEEEecccc
Confidence 3445599999999877889999999999998888765430 11123344555555532 22222 235689999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 103 TMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
..-|.|.|.++..+|+++|+.+|..+
T Consensus 347 ~vel~a~t~~ek~eWv~~I~~~Id~~ 372 (623)
T KOG4424|consen 347 GVELQARTEQEKKEWVQAIQDAIDKH 372 (623)
T ss_pred eEEeecCchhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999998765
No 61
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=98.24 E-value=2.9e-06 Score=67.28 Aligned_cols=89 Identities=21% Similarity=0.349 Sum_probs=72.1
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEc
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVA 108 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a 108 (144)
..|+|.|.......|.-||++|+.+.|.||+++. .....++|.|.|..... ...+ ...+.|.|......+++.+
T Consensus 26 ~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~--E~~hGcRgsi~l~ka~i-~ahE---fDe~rfdIsvn~nv~~lra 99 (611)
T KOG1739|consen 26 RCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSED--ETEHGCRGSICLSKAVI-TAHE---FDECRFDISVNDNVWYLRA 99 (611)
T ss_pred hcceeeeeecccccccceEEEEcccchhhhhhhh--hhhcccceeeEeccCCc-cccc---chhheeeeEeccceeeehh
Confidence 5788888877788999999999999999999974 23567899999988433 2221 1236799999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 035610 109 DTEKEKGERINSIGR 123 (144)
Q Consensus 109 ~s~~e~~~Wi~al~~ 123 (144)
.+...++.|+++|+-
T Consensus 100 ~~~~hr~~w~d~L~w 114 (611)
T KOG1739|consen 100 QDPDHRQQWIDALEW 114 (611)
T ss_pred cCcHHHHHHHHHHHH
Confidence 999999999999977
No 62
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=98.07 E-value=2.7e-06 Score=69.95 Aligned_cols=93 Identities=18% Similarity=0.324 Sum_probs=73.5
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEc
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVA 108 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a 108 (144)
++||+.+.+...+.|++||||++.+++.||+.+.. ....+.+.+++......... .....|++++...++++-+
T Consensus 251 kSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~--~~~~p~s~~d~~s~~~~~~~----~~s~~fqli~~t~~~~~~~ 324 (936)
T KOG0248|consen 251 KSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNN--RDEEPASKIDIRSVTKLEQQ----GAAYAFQLITSTDKMNFMT 324 (936)
T ss_pred cccchhcchHHHHHHHhHheeeccceEEEEEcCCC--ccccccCcccccccceeecc----chhHHhhhhhhceeEEEec
Confidence 68999888888899999999999999999998751 23456667777664333222 3447799998889999999
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 035610 109 DTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 109 ~s~~e~~~Wi~al~~ai~~ 127 (144)
++..-..+|+.-|+.+|.-
T Consensus 325 ~s~~lt~dw~~iL~~~iKv 343 (936)
T KOG0248|consen 325 ESERTTHDWVTILSAAIKA 343 (936)
T ss_pred cChhhhhhhHHHHHHHHHH
Confidence 9999999999999887753
No 63
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=98.04 E-value=1.9e-05 Score=63.34 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=65.6
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcce---EEeCCceEEEee-c-cc--cCCCCceEE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRG---FIPVGTCLTVKC-A-ED--VLNKPFAFE 96 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~---~i~L~~~~~v~~-~-~~--~~~~~~~f~ 96 (144)
...|.+.|+|+.++.+.+.||+-||||+...|||+-... ...++. .-++.+...... + .. .....++|.
T Consensus 314 ~~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~t----sk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~ 389 (622)
T KOG3751|consen 314 SSPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGT----SKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFC 389 (622)
T ss_pred CCCccccceeeecccccccceeEEEEEecCcceEccCCC----CCCchhhHHHHhcccCceEEeecchhccCCCCCceEE
Confidence 457889999999998889999999999999998876554 334432 222333222111 1 11 123347777
Q ss_pred EEeC-----CeE-EEEEcCCHHHHHHHHHHHHHH
Q 035610 97 HSRG-----GYT-MYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 97 I~~~-----~~~-~~l~a~s~~e~~~Wi~al~~a 124 (144)
|... .+. -+|+|+++..+..|+.||+-+
T Consensus 390 ~K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~ 423 (622)
T KOG3751|consen 390 IKPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLL 423 (622)
T ss_pred eeeccccCcccceeeeecccchhHHHHHHHHHHH
Confidence 7632 222 368999999999999999875
No 64
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.01 E-value=0.00011 Score=48.21 Aligned_cols=103 Identities=11% Similarity=0.020 Sum_probs=67.7
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeCCceEEEeec-ccc----CCCCceEEE
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPVGTCLTVKCA-EDV----LNKPFAFEH 97 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L~~~~~v~~~-~~~----~~~~~~f~I 97 (144)
.++...|.|.-.......-+.||..|-+..+...|...+. .+...-+..+.|......... .+. ....++|.|
T Consensus 2 GR~~~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L 81 (116)
T cd01223 2 GRPLLDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYL 81 (116)
T ss_pred CccccCCceEEeEeccCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEE
Confidence 3566677777665434456799999999999998866410 001223445555553222111 111 235588999
Q ss_pred EeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 98 SRGG--YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 98 ~~~~--~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.... ..+.|+|.|++++..||++|..|+..
T Consensus 82 ~~~~~~~~~~f~~Ktee~K~kWm~al~~a~sn 113 (116)
T cd01223 82 AHKQGKTGFTFYFKTEHLRKKWLKALEMAMSN 113 (116)
T ss_pred EecCCCccEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 8654 57899999999999999999998854
No 65
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.96 E-value=2.8e-05 Score=63.09 Aligned_cols=100 Identities=16% Similarity=0.227 Sum_probs=60.9
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCC----eEEEEecCCC---------CCCCCCcceEE--eCCceEEEeeccc--
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQG----EHFWFKDSHN---------ITRGSTPRGFI--PVGTCLTVKCAED-- 87 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~----~l~y~k~~~~---------~~~~~~~~~~i--~L~~~~~v~~~~~-- 87 (144)
.-...+|.+.+++... .|++||+.+.+. ....-..... ++++.....+| +++....+.+...
T Consensus 371 ~~~~~~g~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (496)
T PTZ00283 371 GLTLYEGIVKKQSSDL-SWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKY 449 (496)
T ss_pred CceeeeeEEecccCCc-ccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHh
Confidence 3455788888876554 499999998742 1111011100 00011111122 3333333444432
Q ss_pred -cCCCCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 88 -VLNKPFAFEHSR-GGYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 88 -~~~~~~~f~I~~-~~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
..+.++.|.|.. +++.+.|.|.+.++++.||.+||+++
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (496)
T PTZ00283 450 TGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVL 489 (496)
T ss_pred hCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhc
Confidence 234689999984 67899999999999999999999977
No 66
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.87 E-value=0.00053 Score=45.71 Aligned_cols=80 Identities=13% Similarity=0.182 Sum_probs=48.4
Q ss_pred ceeEEEEEeCCeEEEEecCCC---CCCCCCcceEEeCCceEEEeec----cccCCCCceEEEE------eCCeEEEEEcC
Q 035610 43 WLRRWFILKQGEHFWFKDSHN---ITRGSTPRGFIPVGTCLTVKCA----EDVLNKPFAFEHS------RGGYTMYSVAD 109 (144)
Q Consensus 43 w~~R~fvL~~~~l~y~k~~~~---~~~~~~~~~~i~L~~~~~v~~~----~~~~~~~~~f~I~------~~~~~~~l~a~ 109 (144)
-+.+|+.|-++.|.|-+.+.+ ...+..++..+.+..+...... ......+|.|.|. .....+.|.|+
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~ 106 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLSAD 106 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEECC
Confidence 456899999999999886641 0011112222322221110000 0001467999997 23367899999
Q ss_pred CHHHHHHHHHHHH
Q 035610 110 TEKEKGERINSIG 122 (144)
Q Consensus 110 s~~e~~~Wi~al~ 122 (144)
|..|+.+||.||.
T Consensus 107 S~sdr~rWi~Al~ 119 (125)
T cd01221 107 SQSDRERWLSALA 119 (125)
T ss_pred CHHHHHHHHHhcC
Confidence 9999999999974
No 67
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.77 E-value=1.6e-05 Score=64.33 Aligned_cols=95 Identities=17% Similarity=0.136 Sum_probs=67.8
Q ss_pred eEEEEEeeC----------CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEe-----eccccCCCCc
Q 035610 29 AIGPANKQG----------DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVK-----CAEDVLNKPF 93 (144)
Q Consensus 29 ~~G~L~k~~----------~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~-----~~~~~~~~~~ 93 (144)
+.|+|-.+- .+.+.|+.-|-+|+|-.||+-+++. +..+.+-.-+|.+.+.|+ ++.+-.+++|
T Consensus 508 k~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey---~p~kalse~~lknavsvHHALAt~AtdY~KKp~ 584 (774)
T KOG0932|consen 508 KSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEY---KPGKALSESDLKNAVSVHHALATPATDYSKKPH 584 (774)
T ss_pred hhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeecccc---CcccchhhhhhhhhhhhhhhhcCCCcccccCCc
Confidence 678886652 1345788888899999888888764 223333333465544443 3333357889
Q ss_pred eEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 94 AFEHSRG-GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 94 ~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
.|.|.+. .+.|.|+|.+.++|+.||..|.-+..
T Consensus 585 Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA 618 (774)
T KOG0932|consen 585 VFKLRTADWRVFLFQAPSQEEMQSWIERINLVAA 618 (774)
T ss_pred eEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHH
Confidence 9999965 68999999999999999999987543
No 68
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.63 E-value=0.00027 Score=45.63 Aligned_cols=64 Identities=13% Similarity=0.196 Sum_probs=48.2
Q ss_pred eCCeEEEEe-cCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610 51 KQGEHFWFK-DSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 51 ~~~~l~y~k-~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
.+.-|.+|. .++ ...|.|+|+|...+.+. ....+-|.+...+..+.|.|.+..|++.|+.+|..
T Consensus 47 TGKGLLF~~K~~d----ka~P~GiinLadase~~-----~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 47 TGKGLLFFSKAED----KASPSGIINLADASEPE-----KDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred cCceEEEEecccc----ccCCcceEehhhccccc-----cCCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence 455555554 333 56899999998855542 23446688888889999999999999999999863
No 69
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=97.61 E-value=9.6e-06 Score=68.00 Aligned_cols=93 Identities=17% Similarity=0.217 Sum_probs=77.2
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc-ccCCCCceEEEEeCCeEEEEE
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-DVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~-~~~~~~~~f~I~~~~~~~~l~ 107 (144)
..|+|..+-.-...|.+-|.|...-+|++||+-. +..+..+++|-+...-.+++ +...+.+.|.+...+..|+|.
T Consensus 926 Lsg~LlrkfknssgwqkLwvvft~fcl~fyKS~q----D~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffr 1001 (1036)
T KOG3531|consen 926 LSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQ----DSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFR 1001 (1036)
T ss_pred hhHHHHHHhhccccceeeeeeecceeeEeecccc----cccccccccccccccCCCCCCCCcchhheeeeehhhhHHHHh
Confidence 5677766644556899999999999999999987 88889999988855533333 356788999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGRAI 125 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai 125 (144)
|++.-..++|++.|+.+-
T Consensus 1002 aes~yt~~rw~evi~~a~ 1019 (1036)
T KOG3531|consen 1002 AESYYTFERWMEVITDAP 1019 (1036)
T ss_pred hhhhhhhhhHHHHhhcCC
Confidence 999999999999998853
No 70
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=97.58 E-value=0.00041 Score=58.81 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=75.3
Q ss_pred ecCCceEEEEEeeCC----------CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec--cc--cC
Q 035610 24 WSQPGAIGPANKQGD----------YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA--ED--VL 89 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~----------~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~--~~--~~ 89 (144)
++....+|+|++.-. ...-..++||||-++.|+||.++. ...|.+.|.+..+.++... +. ..
T Consensus 489 s~s~~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~----S~tP~~lI~~~Eivclav~~pd~~pn~ 564 (1186)
T KOG1117|consen 489 SQSTFLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEK----STTPNGLININEIVCLAVHPPDTYPNT 564 (1186)
T ss_pred cccccccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcC----CCCCCceeeccceEEEeecCCCCCCCc
Confidence 445556799998632 112356799999999999999997 7889999999987775433 22 23
Q ss_pred CCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 90 NKPFAFEHSRG-GYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 90 ~~~~~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
+..+.|+|..+ ++.|.|-+++.++...|..++-++.
T Consensus 565 ~~~f~fE~~l~~er~~~fgle~ad~l~~wt~aiaKhf 601 (1186)
T KOG1117|consen 565 GFIFIFEIYLPGERVFLFGLETADALRKWTEAIAKHF 601 (1186)
T ss_pred CceeEEEEeecccceEEeecccHHHHHHHHHHHHHhc
Confidence 55688999965 5778889999999999999998754
No 71
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.57 E-value=0.00076 Score=42.56 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=59.0
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCC---CCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE-eCCe
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSH---NITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS-RGGY 102 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~---~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~-~~~~ 102 (144)
-+++|+|.+--. +.=+.|-|.|-++.|.|-+-.. .........-.|+|... .+...+ |.+. ++++
T Consensus 3 Lv~eg~lvel~~--~~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl-~~~~~~--------~~~~~~~~K 71 (96)
T cd01228 3 LVKDSFLVELVE--GSRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADL-SFPSEP--------FRIHNKNGK 71 (96)
T ss_pred ccccceeeeehh--CCCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHh-eecchh--------hhccccCCc
Confidence 356888877642 3457788899999888766431 01123344567888873 332221 4444 5788
Q ss_pred EEEEEcCCHHHHHHHHHHHHHH
Q 035610 103 TMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~a 124 (144)
+|.+.|.|..|+.+|+++|++.
T Consensus 72 Sf~~~asS~~Er~eW~~hI~~~ 93 (96)
T cd01228 72 SYTFLLSSDYERSEWRESIQKL 93 (96)
T ss_pred eEEEEecCHHHHHHHHHHHHHH
Confidence 9999999999999999999873
No 72
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=97.55 E-value=3.7e-05 Score=64.86 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=78.7
Q ss_pred ecCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCe
Q 035610 24 WSQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGY 102 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~ 102 (144)
...+.+.|||.|... +..-+.+||..+.+..+.||.+.. +.-+.+.|.+..+..|.. .+.+-|+|.++.+
T Consensus 84 isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k----~py~k~~i~va~is~v~~-----~gd~kfevitn~r 154 (1186)
T KOG1117|consen 84 ISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPK----DPYSKGPIPVAAISAVRN-----FGDNKFEVITNQR 154 (1186)
T ss_pred cCchhhcchhhccCcCcccccCccceecCCCCccccCCCC----CCCCCCceeeehhhhhhh-----ccCceEEEEecce
Confidence 446789999999753 445789999999999999999886 566677888887555532 2346799999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 103 TMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.+.|.+++..++..|++.+++++..+
T Consensus 155 ~fvfr~e~~~~r~~w~s~l~s~~~~Q 180 (1186)
T KOG1117|consen 155 TFVFRQESEGERFIWVSPLQSALKEQ 180 (1186)
T ss_pred EEEEecCCcccceeeechhhhcchhh
Confidence 99999999999999999999988765
No 73
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=97.49 E-value=0.00086 Score=42.74 Aligned_cols=81 Identities=10% Similarity=0.165 Sum_probs=53.1
Q ss_pred CCCCceeEEEEEeC----CeEEEEec--CCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEeC-CeEEEEEcC
Q 035610 39 YIKTWLRRWFILKQ----GEHFWFKD--SHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSRG-GYTMYSVAD 109 (144)
Q Consensus 39 ~~~~w~~R~fvL~~----~~l~y~k~--~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~~-~~~~~l~a~ 109 (144)
+...|++.-.+|.. ..+.+|.. .. ...|+-.+....+..|+... +..++.|.|.|... +..|.|-|.
T Consensus 17 ~~~~WqkcRl~L~~~~gg~~le~~~~~pPK----ssrpk~~v~C~~I~EvR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~ 92 (107)
T cd01231 17 SGARWQRGRLVLRKAVGGYMLEFYLPLPPK----SSKPKLQVACSSISEVRECTRLEMPDNLYTFVLKVDDNTDIIFEVG 92 (107)
T ss_pred CccccceeeEEEEecCCCceEEEEccCCCC----CCCCccccchhhhhhhhhcccccccCcccEEEEEecCCceEEEEcC
Confidence 34578887777762 23444444 33 45566555555544443322 22356799999854 458889999
Q ss_pred CHHHHHHHHHHHHH
Q 035610 110 TEKEKGERINSIGR 123 (144)
Q Consensus 110 s~~e~~~Wi~al~~ 123 (144)
+..++++|+..|+.
T Consensus 93 d~~q~~SWla~Ir~ 106 (107)
T cd01231 93 DEQQLNSWLAELRY 106 (107)
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999999985
No 74
>PF15408 PH_7: Pleckstrin homology domain
Probab=97.41 E-value=8.8e-05 Score=45.81 Aligned_cols=87 Identities=14% Similarity=0.153 Sum_probs=58.7
Q ss_pred EEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCc------eEEEEeCCe
Q 035610 30 IGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPF------AFEHSRGGY 102 (144)
Q Consensus 30 ~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~------~f~I~~~~~ 102 (144)
||||..-.. +.-++||.+|++..+.+|.++ ......++.|+......+..+ ....+| +|..+.+++
T Consensus 1 EGYLY~~E~--~si~rRF~~L~~K~~~~~~~K-----GG~~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~ 73 (104)
T PF15408_consen 1 EGYLYRDED--SSIQRRFVMLRSKQFNMYEDK-----GGQYLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSR 73 (104)
T ss_pred CCeEEEecc--chHHHHHHhhhhceeEEeccc-----CCceeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCc
Confidence 578877643 246889999999999888876 366777888877433222222 112232 455555555
Q ss_pred E-EEEEcCCHHHHHHHHHHHHH
Q 035610 103 T-MYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 103 ~-~~l~a~s~~e~~~Wi~al~~ 123 (144)
. .-+.|++.+.+++||+++..
T Consensus 74 ~~~~~FA~S~~~~~~Wi~~mN~ 95 (104)
T PF15408_consen 74 RHVQCFASSKKVCQSWIQVMNS 95 (104)
T ss_pred chhhhhhhHHHHHHHHHHHhcC
Confidence 4 45679999999999999876
No 75
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.39 E-value=0.0042 Score=40.81 Aligned_cols=83 Identities=13% Similarity=0.165 Sum_probs=54.1
Q ss_pred CCceeEEEEEeCCeEEEEecCCCCCCCCCc----ceEEeCCceEEEeeccccCCCCceEEEE--eCC---eEEEEEcCCH
Q 035610 41 KTWLRRWFILKQGEHFWFKDSHNITRGSTP----RGFIPVGTCLTVKCAEDVLNKPFAFEHS--RGG---YTMYSVADTE 111 (144)
Q Consensus 41 ~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~----~~~i~L~~~~~v~~~~~~~~~~~~f~I~--~~~---~~~~l~a~s~ 111 (144)
+.-+.|.+.|-...|.+-+...+......+ +..|.++. ..+.+..+ +.+..|.|- .+. ..|.++|.|.
T Consensus 22 ~K~~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~-l~l~e~v~--gd~~kF~i~~~~~~~~~~~~ilqA~s~ 98 (114)
T cd01232 22 QKGRERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSK-MGLTEHVE--GDPCRFALWSGDPPISDNRIILKANSQ 98 (114)
T ss_pred CCCceeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeee-eEeEEccC--CCCceEEEEeCCCCCCceEEEEECCCH
Confidence 455778888999998888864310000112 35566666 33333222 345667775 333 6889999999
Q ss_pred HHHHHHHHHHHHHHH
Q 035610 112 KEKGERINSIGRAIV 126 (144)
Q Consensus 112 ~e~~~Wi~al~~ai~ 126 (144)
+..+.|+..|++++.
T Consensus 99 e~K~~W~~~I~~il~ 113 (114)
T cd01232 99 ETKQEWVKKIREILQ 113 (114)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999763
No 76
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=97.25 E-value=0.00083 Score=54.97 Aligned_cols=99 Identities=14% Similarity=0.186 Sum_probs=67.5
Q ss_pred ecCCceEEEEEeeC--CCCCCceeEEEEEeCCe-EEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610 24 WSQPGAIGPANKQG--DYIKTWLRRWFILKQGE-HFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR 99 (144)
Q Consensus 24 ~~~~~~~G~L~k~~--~~~~~w~~R~fvL~~~~-l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~ 99 (144)
..++.++|||..|. ....+|-+.||+..... ..-.-+-.. ...+..+...+.|..|+. ...+..++++||.|..
T Consensus 262 p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~R--RktdSIdKRFCFDve~ 339 (812)
T KOG1451|consen 262 PTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSR--RKTDSIDKRFCFDVEV 339 (812)
T ss_pred CCCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhcc--Ccccccccceeeeeee
Confidence 45677999999984 45679999999987643 222222110 011223445566666543 3344568899999996
Q ss_pred CC--eEEEEEcCCHHHHHHHHHHHHHH
Q 035610 100 GG--YTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 100 ~~--~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
.+ +.+.++|-+++++..||+|+-.+
T Consensus 340 ~erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 340 EERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred cccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 54 57888999999999999998764
No 77
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.93 E-value=0.024 Score=37.03 Aligned_cols=76 Identities=17% Similarity=0.272 Sum_probs=51.0
Q ss_pred ceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-------------CCCCceEEEEeCC----eEE
Q 035610 43 WLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-------------LNKPFAFEHSRGG----YTM 104 (144)
Q Consensus 43 w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-------------~~~~~~f~I~~~~----~~~ 104 (144)
-++|+|.|.. +...++.+.. ......++|+.+..|+..... .....+|.|+... +.+
T Consensus 21 ~~~~~f~ld~~~~~l~W~~~~-----~~~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L 95 (115)
T cd01248 21 ERRRLFRLDEKGFFLYWKDEG-----KKEKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSL 95 (115)
T ss_pred eeeEEEEEcCCCcEEEEeCCC-----CccccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEE
Confidence 3567788864 4444444432 225667888887766654321 1334789998543 478
Q ss_pred EEEcCCHHHHHHHHHHHHH
Q 035610 105 YSVADTEKEKGERINSIGR 123 (144)
Q Consensus 105 ~l~a~s~~e~~~Wi~al~~ 123 (144)
.|.|+|.++++.|+..|+.
T Consensus 96 ~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 96 DLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred EEEECCHHHHHHHHHHHhh
Confidence 8999999999999999874
No 78
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=96.68 E-value=0.00042 Score=57.20 Aligned_cols=98 Identities=18% Similarity=0.260 Sum_probs=70.2
Q ss_pred cCCceEEEEEeeCC-CCCCceeEEEEEeCCe-----EEEEecCCCCCCCCCcceEEeCCceEEE-eeccc-cCCCCceEE
Q 035610 25 SQPGAIGPANKQGD-YIKTWLRRWFILKQGE-----HFWFKDSHNITRGSTPRGFIPVGTCLTV-KCAED-VLNKPFAFE 96 (144)
Q Consensus 25 ~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~-----l~y~k~~~~~~~~~~~~~~i~L~~~~~v-~~~~~-~~~~~~~f~ 96 (144)
.+-..+|||+-.|. ..+.|++|||+|-.-. +..|+.+ ...|...|.|++.+.- .++.+ ..+.++-|.
T Consensus 462 ~nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrek-----kaepqel~qldgytvdytdp~pglqgg~~ffn 536 (1218)
T KOG3543|consen 462 PNMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREK-----KAEPQELIQLDGYTVDYTDPSPGLQGGKHFFN 536 (1218)
T ss_pred CccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhc-----ccChHHHhhccCeeeccCCCCCccccchHHHH
Confidence 34456899988874 5689999999997533 3345554 4678889999995542 12222 234445566
Q ss_pred EEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 97 HSRGGYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 97 I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
-.-.+.+..|+.+++.++.-|++|+-+|..+
T Consensus 537 avkegdtvifasddeqdr~lwvqamyratgq 567 (1218)
T KOG3543|consen 537 AVKEGDTVIFASDDEQDRHLWVQAMYRATGQ 567 (1218)
T ss_pred HhccCceEEeccCchhhhhHHHHHHHHhhCC
Confidence 6667788999999999999999999987654
No 79
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=96.31 E-value=0.0063 Score=50.00 Aligned_cols=95 Identities=15% Similarity=0.117 Sum_probs=65.9
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-----cCCCCceEEEEeC
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-----VLNKPFAFEHSRG 100 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-----~~~~~~~f~I~~~ 100 (144)
...+|||+---...-..=++-|..|...++..|.++. ...-...|+|+.+..|..... ....+|||+|.+.
T Consensus 412 t~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s----~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~ 487 (888)
T KOG4236|consen 412 TKLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNES----TNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTA 487 (888)
T ss_pred hhhhcceEEEEechhhhhhhhhheeccceeEeeecCC----CceeEEeecHHHhheeeccCCcccCCCCCCCceEEEEee
Confidence 4457899755432111223446679999999999887 566678999999888765542 2456799999988
Q ss_pred CeEEEEEcCC------------HHHHHHHHHHHHHHH
Q 035610 101 GYTMYSVADT------------EKEKGERINSIGRAI 125 (144)
Q Consensus 101 ~~~~~l~a~s------------~~e~~~Wi~al~~ai 125 (144)
.-.|+ ..++ ...++.|-.+|+.|+
T Consensus 488 ~~vyf-Vge~p~~~~~~~~g~g~d~a~~w~~ai~~al 523 (888)
T KOG4236|consen 488 TTVYF-VGENPSSTPGGESGVGLDAAQGWETAIQQAL 523 (888)
T ss_pred eEEEE-ecCCCCCCccccccccchhhccCchhhhhcc
Confidence 74444 4444 455889999999865
No 80
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=96.30 E-value=0.0045 Score=52.68 Aligned_cols=91 Identities=18% Similarity=0.125 Sum_probs=63.0
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS 106 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l 106 (144)
...+|||.|.....+.|++|||+|.++.+.||++... ....+++.+.+.. ..+...+. .....+......++.
T Consensus 77 ~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~--~~~~~~~~~~~~~-a~i~~~~~----~~~~~~~~~~q~~~~ 149 (799)
T KOG1737|consen 77 ASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSF--SKTTCGGGINLVT-AWIQNGER----MDICSVDGSCQIYLV 149 (799)
T ss_pred ccccceeeccccccCCcccceEEecCcceeeeccCCc--cccCCCCcccccc-cccccCCC----cccchhhcccchhhh
Confidence 3467999999989999999999999989999987651 1345666666655 23221111 111122222456777
Q ss_pred EcCCHHHHHHHHHHHHHH
Q 035610 107 VADTEKEKGERINSIGRA 124 (144)
Q Consensus 107 ~a~s~~e~~~Wi~al~~a 124 (144)
.+.+..+.+.|+.+++.+
T Consensus 150 ~~~~~~~~~~~~~~~~l~ 167 (799)
T KOG1737|consen 150 ELSKKLQRQGWLHALELA 167 (799)
T ss_pred hhhHHHhhcchhhhhhhc
Confidence 888999999999999886
No 81
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.97 E-value=0.15 Score=34.37 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=54.1
Q ss_pred CceeEEEEEeCCeEEEEecCCCCCC-CCCc----ceEEeCCceEEEeeccccCCCCceEEEEeC--CeEEEEEcCCHHHH
Q 035610 42 TWLRRWFILKQGEHFWFKDSHNITR-GSTP----RGFIPVGTCLTVKCAEDVLNKPFAFEHSRG--GYTMYSVADTEKEK 114 (144)
Q Consensus 42 ~w~~R~fvL~~~~l~y~k~~~~~~~-~~~~----~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~--~~~~~l~a~s~~e~ 114 (144)
.-+.|++.|-+..+.+.+...+... ...| +..|.++. ..+. +...+.+..|.|-+. ...|.++|.|.+..
T Consensus 28 K~~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~-lglt--e~v~gd~~kFeiw~~~~~~~yilqA~t~e~K 104 (133)
T cd01227 28 KPMQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTA-VGIT--ENVKGDTKKFEIWYNAREEVYILQAPTPEIK 104 (133)
T ss_pred CCceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeec-cccc--ccCCCCccEEEEEeCCCCcEEEEEcCCHHHH
Confidence 3467999999998888876530000 0112 23444433 2221 222244677888753 45888999999999
Q ss_pred HHHHHHHHHHHHhcC
Q 035610 115 GERINSIGRAIVQHS 129 (144)
Q Consensus 115 ~~Wi~al~~ai~~~~ 129 (144)
+.|+..|+..+.++.
T Consensus 105 ~~Wv~~I~~iL~~Q~ 119 (133)
T cd01227 105 AAWVNEIRKVLTSQL 119 (133)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999776653
No 82
>PF15411 PH_10: Pleckstrin homology domain
Probab=95.86 E-value=0.27 Score=32.36 Aligned_cols=92 Identities=10% Similarity=-0.017 Sum_probs=60.4
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCC---------------CCCcceEEeCCceEEEeeccccCC
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITR---------------GSTPRGFIPVGTCLTVKCAEDVLN 90 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~---------------~~~~~~~i~L~~~~~v~~~~~~~~ 90 (144)
+-...|-+..... ..|+..++-|-...|..++....... .-..+|.|.+..+..|.... ..
T Consensus 6 ~Lll~g~~~V~k~--~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s--~~ 81 (116)
T PF15411_consen 6 ELLLHGTLTVGKD--DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSS--KP 81 (116)
T ss_pred ceEEccEEEEEeC--CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccC--CC
Confidence 3344555555443 57999999999999988886542111 00124666666655554332 24
Q ss_pred CCceEEEEe----CCeEEEEEcCCHHHHHHHHHHH
Q 035610 91 KPFAFEHSR----GGYTMYSVADTEKEKGERINSI 121 (144)
Q Consensus 91 ~~~~f~I~~----~~~~~~l~a~s~~e~~~Wi~al 121 (144)
..+.++|.- ....|.+...+++.++.|-.+|
T Consensus 82 g~~~L~i~w~~d~e~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 82 GSYSLQISWKGDPELENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred CceEEEEEEcCCCCCceEEEEeCCHHHHHHHHhhC
Confidence 557888885 2368999999999999998875
No 83
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=95.53 E-value=0.00098 Score=54.75 Aligned_cols=68 Identities=19% Similarity=0.369 Sum_probs=51.3
Q ss_pred ceeecCCceEEEEEeeCC---CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCc
Q 035610 21 IEFWSQPGAIGPANKQGD---YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPF 93 (144)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~---~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~ 93 (144)
++...+....||+++... +...|++-||||.+..|+.|.++. ...+.++|.|-. ..+..+.+..+++.
T Consensus 556 ~~~l~~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~----~~~~e~~i~l~~-~~i~~a~e~~~~~~ 626 (638)
T KOG1738|consen 556 LELLGRGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHR----VRAAESVIKLPL-FTISVAEEVLGKPE 626 (638)
T ss_pred HHHhccchhhccchhhccchHHHHHhhhheeeecCchhhhhhhhh----hhchhheeeccc-hhhhhHHHhccCHh
Confidence 444557778899988752 456899999999999999999987 778889999988 55555555434443
No 84
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=95.48 E-value=0.028 Score=46.45 Aligned_cols=81 Identities=12% Similarity=0.160 Sum_probs=51.0
Q ss_pred CceeEEEEEeCCeEEEEecCCC---CCCCCCcceEEeCCceEEEeecc----ccCCCCceEEEEe----C--CeEEEEEc
Q 035610 42 TWLRRWFILKQGEHFWFKDSHN---ITRGSTPRGFIPVGTCLTVKCAE----DVLNKPFAFEHSR----G--GYTMYSVA 108 (144)
Q Consensus 42 ~w~~R~fvL~~~~l~y~k~~~~---~~~~~~~~~~i~L~~~~~v~~~~----~~~~~~~~f~I~~----~--~~~~~l~a 108 (144)
..+.-|+.|-++.|.+-+.+.+ ...+..++..+.+..|....... .....+|.|.+.- . .-.+.|.|
T Consensus 498 ~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~a 577 (695)
T KOG3523|consen 498 LSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTELLLSA 577 (695)
T ss_pred ccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceeeeecC
Confidence 4566789999999988887652 11223344455444433100000 1134567888872 2 24678899
Q ss_pred CCHHHHHHHHHHHH
Q 035610 109 DTEKEKGERINSIG 122 (144)
Q Consensus 109 ~s~~e~~~Wi~al~ 122 (144)
+|..|++.||.||.
T Consensus 578 ~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 578 ESQSDRQRWISALR 591 (695)
T ss_pred CchHHHHHHHHhcC
Confidence 99999999999987
No 85
>KOG3549 consensus Syntrophins (type gamma) [Extracellular structures]
Probab=95.47 E-value=0.022 Score=44.23 Aligned_cols=103 Identities=19% Similarity=0.178 Sum_probs=66.6
Q ss_pred ecCCceEEEEEee--CC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcc--eEEeC--CceEEEeeccccCCCCceEE
Q 035610 24 WSQPGAIGPANKQ--GD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPR--GFIPV--GTCLTVKCAEDVLNKPFAFE 96 (144)
Q Consensus 24 ~~~~~~~G~L~k~--~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~--~~i~L--~~~~~v~~~~~~~~~~~~f~ 96 (144)
..+...-||..-. +. ..+.++.||..|++.+++.|..++ ++--.-.+ ....+ ..+..+++.+-.-.+++||.
T Consensus 278 ~~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPP-v~t~dw~rAe~ty~vye~mfki~Kdsd~~D~R~~CF~ 356 (505)
T KOG3549|consen 278 GEQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPP-VNTADWSRAEVTYKVYETMFKIVKDSDTVDSRQHCFL 356 (505)
T ss_pred cceEEEeeeccccccCcccccccCceeEEecCcEEEEEcCCC-cchhhhhhhhhhHHHHHHHHHHhccccccccccceEE
Confidence 3445567898665 22 346789999999999999998765 11000000 01111 01111222222236789999
Q ss_pred EEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 97 HSRG-GYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 97 I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
|... +...||..+...|...|-.+.+.|+.-
T Consensus 357 ~qs~~ge~~yfsVEl~seLa~wE~sfq~Atf~ 388 (505)
T KOG3549|consen 357 LQSSGGEPRYFSVELRSELARWENSFQAATFT 388 (505)
T ss_pred EEcCCCCceEEEEehhhHHHHHHHHHhhHHhH
Confidence 9965 568899999999999999999998654
No 86
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=95.38 E-value=5.3e-05 Score=59.03 Aligned_cols=83 Identities=17% Similarity=0.378 Sum_probs=67.0
Q ss_pred CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHH
Q 035610 40 IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERIN 119 (144)
Q Consensus 40 ~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~ 119 (144)
...|++-||++....+.||.+.. -......-+.|+|..|..|... .....++|+|.+.+..|-+.+.+......||.
T Consensus 32 t~~~~k~~~~~~~~~~~~~~d~~-A~~~~~L~~~~~LR~C~~v~e~--a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~ 108 (593)
T KOG4807|consen 32 TSQWKKHWFVLTDSSLKYYRDST-AEEADELDGEIDLRSCTDVTEY--AVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIE 108 (593)
T ss_pred hHHHHHHHHHHhHHHHHHHHHHH-HHhcccCCccccHHHHHHHHHH--HHHhccceeecccchhhhhHHHHHHHHHHHHH
Confidence 34699999999999999999864 1123345688999998776432 24677999999999999999999999999999
Q ss_pred HHHHHH
Q 035610 120 SIGRAI 125 (144)
Q Consensus 120 al~~ai 125 (144)
++++.+
T Consensus 109 A~~kT~ 114 (593)
T KOG4807|consen 109 ALRKTV 114 (593)
T ss_pred HHHhcc
Confidence 999855
No 87
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=95.07 E-value=0.15 Score=34.49 Aligned_cols=94 Identities=16% Similarity=0.212 Sum_probs=41.4
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCC---CCCCcceEEeCCceEEEeeccc------------------
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNIT---RGSTPRGFIPVGTCLTVKCAED------------------ 87 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~---~~~~~~~~i~L~~~~~v~~~~~------------------ 87 (144)
.+|-|.+++.....|..-.++|-++.|..-|.+. .. .-..-+..|+|.-... ...++
T Consensus 3 ~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~-~~k~e~ykV~r~PIPLeLL~l-~~~~d~~~~~~~~~r~s~s~~~~ 80 (135)
T PF15405_consen 3 YKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPKK-VNKREQYKVYRRPIPLELLVL-ESMDDPPPQRSIAKRPSSSLISS 80 (135)
T ss_dssp --------------S-EEEEEEESSEEEEEEEEE-ETTEEEEEESS--EEGGG-EE-EE--TTTS---------S-----
T ss_pred cccccccccccccccceeEEEeeccEEEEEEEEe-cCCeEEEEEEECCcCHHHeee-ecccCCCcccCcccccccCccCC
Confidence 5688888877666788888888888888777653 10 0011234555554221 11000
Q ss_pred ------------cCCCCce--EEEEeC---CeEEEEEcCCHHHHHHHHHHHHHH
Q 035610 88 ------------VLNKPFA--FEHSRG---GYTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 88 ------------~~~~~~~--f~I~~~---~~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
....+.. |.+..- +..|.|+|+|..++++|+++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 81 SSSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp --SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred ccCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 0112333 444322 345789999999999999999874
No 88
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=94.02 E-value=0.1 Score=42.34 Aligned_cols=78 Identities=19% Similarity=0.266 Sum_probs=56.1
Q ss_pred eeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHH
Q 035610 44 LRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YTMYSVADTEKEKGERINSIG 122 (144)
Q Consensus 44 ~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~ 122 (144)
+.|||+|-.+.|.++.-...+ ....-.|.++++| ..|...++.-...+.|.|...- ......|....+.++|+.+++
T Consensus 326 ~dRy~~LF~~~llflsvs~rM-s~fIyegKlp~tG-~iV~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ln 403 (661)
T KOG2070|consen 326 KDRYLLLFPNVLLFLSVSPRM-SGFIYEGKLPTTG-MIVTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEHLN 403 (661)
T ss_pred hhheeeeccceeeeeEecccc-chhhhccccccce-eEEeehhhhhcccccccccccchhheeeccCChHHHHHHHHHhh
Confidence 589999999998887754301 1123356788888 5666666544677889988543 345567999999999999998
Q ss_pred H
Q 035610 123 R 123 (144)
Q Consensus 123 ~ 123 (144)
.
T Consensus 404 ~ 404 (661)
T KOG2070|consen 404 K 404 (661)
T ss_pred h
Confidence 6
No 89
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=93.46 E-value=0.078 Score=43.64 Aligned_cols=96 Identities=10% Similarity=0.037 Sum_probs=68.4
Q ss_pred eEEEEEeeCCCCCCceeEEEEEe---CCeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEeCCeEE
Q 035610 29 AIGPANKQGDYIKTWLRRWFILK---QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSRGGYTM 104 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~---~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~~~~~~ 104 (144)
..+.|.+.......|...|+++- ...++.|.... +......|+|.+|....+. ....+..+.|.+......+
T Consensus 499 ~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~q----Dv~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~ 574 (623)
T KOG4424|consen 499 ICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQ----DVRAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSW 574 (623)
T ss_pred ehhhHHHHhhcCccceeeeeeccCCCCccccccCCcc----ccccccccccCccccCCCcccccchhcchhhhhhhccee
Confidence 34444333335568999998874 24577788776 7778899999996543111 1223555778888777899
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 105 YSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 105 ~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
++.|+|.+-.+.|++.|..|....
T Consensus 575 ~~~a~~~q~qq~wl~~l~~A~~~d 598 (623)
T KOG4424|consen 575 HLAADDEQLQQRWLEVLLLAVSGD 598 (623)
T ss_pred eeccCCHHHHHHHHHHHHhhhccc
Confidence 999999999999999999987553
No 90
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=93.25 E-value=0.056 Score=42.58 Aligned_cols=99 Identities=19% Similarity=0.197 Sum_probs=67.4
Q ss_pred CCceEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccC----CCCceEEEE
Q 035610 26 QPGAIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVL----NKPFAFEHS 98 (144)
Q Consensus 26 ~~~~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~----~~~~~f~I~ 98 (144)
+...-|||.+| +++.+.|+..+.+|.+..|.+|.+... .+.=..|..+.+|--...|....... +....|.+.
T Consensus 291 evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~R 370 (506)
T KOG3551|consen 291 EVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFATR 370 (506)
T ss_pred chhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEEe
Confidence 33456999887 556778999999999999998887541 11124566677776544455443321 112356666
Q ss_pred eCC----eEEEEEcCCHHHHHHHHHHHHHH
Q 035610 99 RGG----YTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 99 ~~~----~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
+.. .++.|.++|..|+..|...|-+.
T Consensus 371 tGTrqGV~thlfrvEThrdLa~WtRslVqG 400 (506)
T KOG3551|consen 371 TGTRQGVETHLFRVETHRELAAWTRSLVQG 400 (506)
T ss_pred cccccceEEEEEEeccHHHHHHHHHHHHHH
Confidence 542 57889999999999999988653
No 91
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=93.10 E-value=1.9 Score=29.50 Aligned_cols=82 Identities=16% Similarity=0.235 Sum_probs=51.6
Q ss_pred eEEEEEeCCeEEEEecCCCCCCCCC----------------cceEEeCCceEEEeecc-ccCCCCceEEEEe--------
Q 035610 45 RRWFILKQGEHFWFKDSHNITRGST----------------PRGFIPVGTCLTVKCAE-DVLNKPFAFEHSR-------- 99 (144)
Q Consensus 45 ~R~fvL~~~~l~y~k~~~~~~~~~~----------------~~~~i~L~~~~~v~~~~-~~~~~~~~f~I~~-------- 99 (144)
-.-||.+.-.+..|+... ..+.+- -+..|+++. ..|+... ......+.+.|+.
T Consensus 51 ~~~FVFK~AVVlv~ke~~-K~KkKl~~~~r~~~~~e~dp~rfr~miP~~a-lQVR~~n~ad~e~~~vwEliH~kSe~egR 128 (160)
T cd01255 51 LMCFVFKSAVVLVYKERL-KQKKKLMGVSRKNATNEVDPFRFRVLIPVTA-LQVRASSAADMESNFLWELIHLKSELEGR 128 (160)
T ss_pred EEEEEecceEEEEEcCcc-hhhhccccccccccccccCceeEEEeeceee-eeeecCCCcCcccceEEEEEeecccccCC
Confidence 356778887777777643 100000 122455544 3333222 1245557777773
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 100 GGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+++.|.|+|.+.+.++..+..|++.+.+.
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsilre~ 157 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSILRES 157 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999987654
No 92
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=92.97 E-value=0.016 Score=47.37 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=55.5
Q ss_pred CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE---eCCeEEEEEcCCHHHHHH
Q 035610 40 IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS---RGGYTMYSVADTEKEKGE 116 (144)
Q Consensus 40 ~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~---~~~~~~~l~a~s~~e~~~ 116 (144)
.+.+++.||....-.+.+|++.. .+ ...|...|.+.+|.....+.....+-+-|.+. .....+++.|+++.....
T Consensus 372 ~Kg~kr~f~t~~dl~~~~~~s~~-~s-~~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~ 449 (664)
T KOG3727|consen 372 LKGYKRYFFTFRDLHLSLYKSSE-DS-RGAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYAR 449 (664)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHh-hh-cCCCCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHH
Confidence 34556666655554444444433 12 25677888888875533333321222233333 234688999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcc
Q 035610 117 RINSIGRAIVQHSRSVTES 135 (144)
Q Consensus 117 Wi~al~~ai~~~~~~~~~~ 135 (144)
||.|.+-|. .++++.|+
T Consensus 450 WMAaCrLAS--KGktMADS 466 (664)
T KOG3727|consen 450 WMAACRLAS--KGKTMADS 466 (664)
T ss_pred HHHHhhHhh--cCCccccc
Confidence 999998866 45555543
No 93
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=92.95 E-value=0.029 Score=47.07 Aligned_cols=88 Identities=5% Similarity=-0.222 Sum_probs=63.2
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS 106 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l 106 (144)
+.+.|+|.++....+.|+.+||++.++.+.+++++. + .+.+.+.+.+.......... -.-+++....++++
T Consensus 259 ~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~----d-~~s~~~~~~~~~s~~fqli~----~t~~~~~~~~s~~l 329 (936)
T KOG0248|consen 259 TSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKI----D-IRSVTKLEQQGAAYAFQLIT----STDKMNFMTESERT 329 (936)
T ss_pred hHHHHHHHhHheeeccceEEEEEcCCCccccccCcc----c-ccccceeeccchhHHhhhhh----hceeEEEeccChhh
Confidence 456788888888899999999999999999999885 3 34455545543333222211 11234455567889
Q ss_pred EcCCHHHHHHHHHHHHH
Q 035610 107 VADTEKEKGERINSIGR 123 (144)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ 123 (144)
.++...-.++||.+++.
T Consensus 330 t~dw~~iL~~~iKv~~~ 346 (936)
T KOG0248|consen 330 THDWVTILSAAIKATTL 346 (936)
T ss_pred hhhhHHHHHHHHHHHhc
Confidence 99999999999999876
No 94
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=90.56 E-value=0.37 Score=41.63 Aligned_cols=59 Identities=25% Similarity=0.254 Sum_probs=42.8
Q ss_pred CcceEEeCCceEEEeeccccCCCCceEEEE---eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 69 TPRGFIPVGTCLTVKCAEDVLNKPFAFEHS---RGGYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 69 ~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~---~~~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
-.+|..++..+..|......-++.+.|.|. +....+.++|++.+++.+|+.+|+++.-.
T Consensus 851 l~rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~ 912 (1267)
T KOG1264|consen 851 LCRGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWK 912 (1267)
T ss_pred hhhccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHH
Confidence 345677777766666555544556777776 23457789999999999999999986543
No 95
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=87.49 E-value=0.52 Score=40.70 Aligned_cols=96 Identities=21% Similarity=0.220 Sum_probs=64.9
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEc
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVA 108 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a 108 (144)
..|-|.|... +.-+.|-|.|-...|.|-.......+.....|-+++. ..++.+++....||||.|.+..+..+.+|
T Consensus 752 r~g~llK~sk--kgLqqrmfFLfsdillytsk~~~~~~~fri~g~lP~~--l~~en~en~~s~p~~~ti~~~qk~i~vsa 827 (1036)
T KOG3531|consen 752 RSGCLLKLSK--KGLQQRMFFLFSDILLYTSKGPDVQKCFRINGDLPLT--LTMENSENEWSVPHCFTISGAQKQIYVSA 827 (1036)
T ss_pred hcCCchhhcc--ccchhhhhhhhhhhheeccCCCChhheeEeccCCceE--eeeecccccccCCceEEEeccceEEEEec
Confidence 4566666542 3456676677766665533321122233445555555 33445555568899999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 035610 109 DTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 109 ~s~~e~~~Wi~al~~ai~~~ 128 (144)
.+..+.++|...++.+|.-.
T Consensus 828 st~~~sk~~~~~r~~~i~~~ 847 (1036)
T KOG3531|consen 828 STRRESKKWEFDRRKAIDLA 847 (1036)
T ss_pred cchhhhhhhhhccchhhhhc
Confidence 99999999999988887543
No 96
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=87.43 E-value=2.6 Score=27.43 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=32.0
Q ss_pred CCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 91 KPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 91 ~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
..+.|-|.|..+..-|-|+|..+.+.|.++|+.-+..
T Consensus 69 ~~~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~~ 105 (110)
T PF08458_consen 69 ERRYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLSQ 105 (110)
T ss_pred eEEEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999986543
No 97
>PF15404 PH_4: Pleckstrin homology domain
Probab=86.99 E-value=1.3 Score=31.59 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=28.1
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEec
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~ 60 (144)
+.|.|..+.+.-..|+++|+||..|.|..|..
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~ 32 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQL 32 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEE
Confidence 46899988877789999999999999998886
No 98
>KOG4047 consensus Docking protein 1 (p62dok) [Signal transduction mechanisms]
Probab=86.91 E-value=0.55 Score=37.69 Aligned_cols=101 Identities=13% Similarity=0.049 Sum_probs=60.8
Q ss_pred cCCceEEEEEeeCCC--CCCceeEEEEEeCCe------EEEEecCC--CCCCCCC-cceEEeCCceEEEeeccccCCCC-
Q 035610 25 SQPGAIGPANKQGDY--IKTWLRRWFILKQGE------HFWFKDSH--NITRGST-PRGFIPVGTCLTVKCAEDVLNKP- 92 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~--~~~w~~R~fvL~~~~------l~y~k~~~--~~~~~~~-~~~~i~L~~~~~v~~~~~~~~~~- 92 (144)
...++.|++..+... .+.|+++|.+|..+. |-.|..+. ++..... .+..+.|+.|.++..+..+...+
T Consensus 6 ~~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~ 85 (429)
T KOG4047|consen 6 SCLVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPG 85 (429)
T ss_pred CcccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCC
Confidence 345677777666433 359999999998654 22333221 0111111 23778889988887765543233
Q ss_pred -ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 93 -FAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 93 -~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
..|-..+... +|.+....+...|+++|......
T Consensus 86 i~~~f~~~a~e--~~~~~q~l~~~~w~~~i~~~~~~ 119 (429)
T KOG4047|consen 86 ITAFFCDRAEE--LFNMLQDLMQANWINAIEEPAIP 119 (429)
T ss_pred ceEEEecchHH--HHHHHHHHHhhhhhhhhhhcccc
Confidence 3333332222 67788888899999999885443
No 99
>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]
Probab=86.17 E-value=3.4 Score=34.71 Aligned_cols=106 Identities=13% Similarity=0.077 Sum_probs=71.0
Q ss_pred ceeecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec--cc--c-----CCC
Q 035610 21 IEFWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA--ED--V-----LNK 91 (144)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~--~~--~-----~~~ 91 (144)
.+-+.+|...|-|.......++=+.||..|-+..+...|... ........|.|... .+... .+ . ...
T Consensus 400 l~~~GRpkiDGElki~s~~~~tkqdRyiFLfDkvviVCKrkG---~sy~lke~i~l~~y-~m~d~~~~~kd~kk~~~~~w 475 (865)
T KOG2996|consen 400 LHDFGRPKIDGELKITSTQAHTKQDRYIFLFDKVVIVCKRKG---DSYELKEIIYLNAY-KMSDDPIDDKDNKKVSTITW 475 (865)
T ss_pred HHHhCCCCcCceEEEeehhcCCccceEEeEecceEEEeeccC---cchhHHHHHHHHhh-ccccCCCCchhhhhccceee
Confidence 344678888999988765556778899999999988888765 12223334444331 11111 11 1 124
Q ss_pred CceEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610 92 PFAFEHSRG--GYTMYSVADTEKEKGERINSIGRAIVQHSR 130 (144)
Q Consensus 92 ~~~f~I~~~--~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~ 130 (144)
.++|.|+.. ...+-|++.+++-+..||+++.-|+.....
T Consensus 476 s~~f~lI~tqg~ngl~fy~Kte~~kkkWmeqfema~SNi~P 516 (865)
T KOG2996|consen 476 SYGFYLIHTQGRNGLEFYCKTEDLKKKWMEQFEMAKSNISP 516 (865)
T ss_pred eeeEEEEEEcCCcceEEEEecHHHHHHHHHHHHHHHhcCCc
Confidence 578888743 347889999999999999999998865543
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=86.11 E-value=0.66 Score=38.56 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=28.8
Q ss_pred eEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 94 AFEHSR-GGYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 94 ~f~I~~-~~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+|.|+. ....++|.|.+.+|++.|+++|+..|.
T Consensus 447 ~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIl 480 (749)
T KOG0705|consen 447 CFEIVSNTGQTWHFEATTYEERDAWVQAIQSQIL 480 (749)
T ss_pred eEEEeccccchhhhhhcchhhHHHHHHHHHHHHH
Confidence 899885 467889999999999999999998664
No 101
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=81.42 E-value=2.9 Score=37.56 Aligned_cols=68 Identities=18% Similarity=0.166 Sum_probs=45.9
Q ss_pred CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 53 GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG---GYTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 53 ~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~---~~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+.-++|+... ....+|.|... .|+... ..++-.|.|.+. ...|-+.|.|..|++.||+.|+.++..-.
T Consensus 655 D~Kyifksl~------~~spVisL~~l-ivRevA--td~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~ 725 (1167)
T KOG3520|consen 655 DQKYIFKSLD------KKSPVISLQKL-IVREVA--TDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCP 725 (1167)
T ss_pred CceeEeeccc------cCCCceehHHH-HHHHHh--ccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCC
Confidence 3455666543 24567777773 443332 234455777754 46788999999999999999999886544
No 102
>KOG4407 consensus Predicted Rho GTPase-activating protein [General function prediction only]
Probab=80.39 E-value=0.057 Score=48.36 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=68.9
Q ss_pred ceeecCCceEEEEEee----------CCCCCCceeEEEEEeCCeEEEEecCCCCC----------CCCCcceEEeCCceE
Q 035610 21 IEFWSQPGAIGPANKQ----------GDYIKTWLRRWFILKQGEHFWFKDSHNIT----------RGSTPRGFIPVGTCL 80 (144)
Q Consensus 21 ~~~~~~~~~~G~L~k~----------~~~~~~w~~R~fvL~~~~l~y~k~~~~~~----------~~~~~~~~i~L~~~~ 80 (144)
.+.+.+..++|||+.+ |.....|+.-|-+|.++.++.+++..+-. ........+.+..|.
T Consensus 917 ~e~Fsd~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscl 996 (1973)
T KOG4407|consen 917 IELFSDSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCL 996 (1973)
T ss_pred hhhhhhhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccch
Confidence 4557788899999764 23456899999999999999998875200 001112233344432
Q ss_pred EEeeccccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 81 TVKCAEDVLNKPFAFEHSRGG-YTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 81 ~v~~~~~~~~~~~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
... .....++.+.|++.+.+ -.+.|.+++.+++-.|+...++..
T Consensus 997 tdI-~ysetkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~St 1041 (1973)
T KOG4407|consen 997 TDI-QYSETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSST 1041 (1973)
T ss_pred hhh-hhhhhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhcc
Confidence 211 11224566788888765 466789999999999999997754
No 103
>PF15404 PH_4: Pleckstrin homology domain
Probab=78.89 E-value=2.2 Score=30.42 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=22.4
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610 99 RGGYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 99 ~~~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
.+++.+.|.|.|..|++.|+-+|..
T Consensus 159 ~~gks~VF~ARSRqERD~WV~~I~~ 183 (185)
T PF15404_consen 159 VSGKSMVFMARSRQERDLWVLAINT 183 (185)
T ss_pred CCCcEEEEEeccHHHHHHHHHHHHh
Confidence 4578999999999999999999875
No 104
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=78.48 E-value=3.1 Score=33.14 Aligned_cols=35 Identities=14% Similarity=0.040 Sum_probs=28.7
Q ss_pred CceEEEEeCCe--EEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 92 PFAFEHSRGGY--TMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 92 ~~~f~I~~~~~--~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
.-+|+|.+++. +..+.|.+..++..|..+|..++.
T Consensus 236 nR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~ 272 (506)
T KOG3551|consen 236 NRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVN 272 (506)
T ss_pred cceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHh
Confidence 35789998764 567789999999999999988654
No 105
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=71.93 E-value=21 Score=22.25 Aligned_cols=80 Identities=15% Similarity=0.052 Sum_probs=47.8
Q ss_pred eeEEEEEe---CC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHHHHH
Q 035610 44 LRRWFILK---QG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERI 118 (144)
Q Consensus 44 ~~R~fvL~---~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi 118 (144)
+.||.+|. .+ .+..++.+............-+|.....|....+ ......|.|... +.|+..|.+..|+...|
T Consensus 4 K~r~Lclsv~~~~~~~v~l~k~K~~~~g~f~i~ktW~L~eL~~I~~~~~-~~~~~~F~l~~~-k~y~W~a~s~~Ek~~Fi 81 (91)
T PF15277_consen 4 KPRYLCLSVTNSPRIQVRLHKVKQNDNGSFQIGKTWDLDELKAIDGINP-DKDTPEFDLTFD-KPYYWEASSAKEKNTFI 81 (91)
T ss_dssp EEEEEEEEEETTETTEEEEEEEEE-CCS-EEEEEEEEGGG--EEEE-SS-S--TTEEEEESS-SEEEEEESSHHHHHHHH
T ss_pred ccEEEEEEEecCCceEEEEEEEEecCCCcEEEeeEEehhhceeeeeecC-CCCCcCEEEEEC-CCcEEEeCCHHHHHHHH
Confidence 56777664 22 3666665431111123345557777666543332 123468999875 48999999999999999
Q ss_pred HHHHHHH
Q 035610 119 NSIGRAI 125 (144)
Q Consensus 119 ~al~~ai 125 (144)
..|-+..
T Consensus 82 ~~L~k~~ 88 (91)
T PF15277_consen 82 RSLWKLY 88 (91)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9987754
No 106
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=71.68 E-value=0.079 Score=45.35 Aligned_cols=90 Identities=16% Similarity=0.052 Sum_probs=57.3
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCe-EEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGE-HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~-l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
+.|-..++..-...|+.|++.+++.. .++-+... ...-..+++.. ..+..... ..-++.|.|+++-+...++
T Consensus 4 ~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~-----g~~~~~~d~t~-a~~~eSs~-~n~~~sf~vi~~~rk~r~~ 76 (1099)
T KOG1170|consen 4 TRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTAS-----GPLFALLDLTS-AHVAESST-NNPRPSFCVITPVRKHRLC 76 (1099)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHhccC-----CccHHHHhccc-cccccccc-CCCCCCeeEecccHHhhhh
Confidence 34555555444457888888887765 33333332 22222333443 22322222 3556889999999999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGRAI 125 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai 125 (144)
+++..++..|+.+++...
T Consensus 77 adn~ke~e~wi~~~kt~q 94 (1099)
T KOG1170|consen 77 ADNRKEMEKWINQSKTPQ 94 (1099)
T ss_pred ccchhHHHHhhccccchh
Confidence 999999999999988743
No 107
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=69.74 E-value=17 Score=30.42 Aligned_cols=83 Identities=17% Similarity=0.182 Sum_probs=55.6
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
+.|.|.|+.+. .-++|.|+|.+ +.+.|+... .....+.|++..+..+. ......|-|.++.+.|++.
T Consensus 453 k~~~l~k~~~l--f~rkr~lllTn~~rll~~~~~-----~~~lk~eip~~~~~~~e-----~~n~~~~~i~TP~k~~~l~ 520 (604)
T KOG0592|consen 453 KEGALEKRQGL--FARKRMLLLTNGPRLLYVDPQ-----NLVLKGEIPWSPDLRVE-----LKNSSTFFIHTPNKVYYLE 520 (604)
T ss_pred hHHHHHhhhhh--hhceeEEEecCCCeEEEEecc-----cceeccccccCccccee-----eccCcceEEECCccceecc
Confidence 34555554322 23568888886 456666643 56778888888754442 2344669999999998875
Q ss_pred cCCHHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGRA 124 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~a 124 (144)
- -...+..|..+|...
T Consensus 521 d-~~~~as~w~~ai~~~ 536 (604)
T KOG0592|consen 521 D-PEQRASVWCKAIETV 536 (604)
T ss_pred C-cccchhHHHHhhhhh
Confidence 4 445578899999987
No 108
>KOG0517 consensus Beta-spectrin [Cytoskeleton]
Probab=68.46 E-value=0.098 Score=48.35 Aligned_cols=99 Identities=17% Similarity=0.200 Sum_probs=63.9
Q ss_pred ceEEEEEee---C-----CCCCCceeEEEEEeCCeEEEEecCCCCCCC--CCcceEEeCCceEE-EeeccccCCCCceEE
Q 035610 28 GAIGPANKQ---G-----DYIKTWLRRWFILKQGEHFWFKDSHNITRG--STPRGFIPVGTCLT-VKCAEDVLNKPFAFE 96 (144)
Q Consensus 28 ~~~G~L~k~---~-----~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~--~~~~~~i~L~~~~~-v~~~~~~~~~~~~f~ 96 (144)
..+|+|..+ + ...+.|..-||++..+.+.+|++....... ...++...|+.... +....+-..+++.|.
T Consensus 2300 ~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~~a~i~~a~dy~kkk~v~~ 2379 (2473)
T KOG0517|consen 2300 QLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELDMAAIEVASDYHKKKHVFL 2379 (2473)
T ss_pred HHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcchhHHHHHHHHHHHhHhhh
Confidence 357888554 1 145789999999999999999886511000 11223333332111 112223246678888
Q ss_pred EEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 97 HSRG-GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 97 I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+..+ +..|.|.|.+.++++.|+.++..++.
T Consensus 2380 l~~~~gae~llq~k~ee~m~sWL~~~a~~~~ 2410 (2473)
T KOG0517|consen 2380 LQLPPGAEHLLQAKDEEEMESWLRALAVKRA 2410 (2473)
T ss_pred hcCCchHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 8854 56788999999999999999988765
No 109
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=65.76 E-value=3.6 Score=22.86 Aligned_cols=21 Identities=14% Similarity=0.530 Sum_probs=18.6
Q ss_pred CCCceeEEEEEeCCeEEEEec
Q 035610 40 IKTWLRRWFILKQGEHFWFKD 60 (144)
Q Consensus 40 ~~~w~~R~fvL~~~~l~y~k~ 60 (144)
.+.|.++|..+.+..|..|+-
T Consensus 27 Vr~wEKKWVtv~dtslriyKW 47 (52)
T PF04714_consen 27 VRKWEKKWVTVGDTSLRIYKW 47 (52)
T ss_pred HHHHhhceEEeccceEEEEEE
Confidence 468999999999999999985
No 110
>KOG1729 consensus FYVE finger containing protein [General function prediction only]
Probab=65.66 E-value=1.7 Score=33.18 Aligned_cols=85 Identities=14% Similarity=0.071 Sum_probs=54.6
Q ss_pred CceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHH
Q 035610 42 TWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSI 121 (144)
Q Consensus 42 ~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al 121 (144)
.-+.|+|.|.++.+.|-..-. ..........+++.+ .......+...-+++..|.+..+.+.+.+.+..++.+|+.+|
T Consensus 59 ~~q~r~~~l~~D~~~~~~~~~-~~~~~~~~~~~~le~-~~~~~~~~~~~~~~~~~~~S~~ks~~~~~as~~ek~e~~~~i 136 (288)
T KOG1729|consen 59 KLQSRSFFLFNDILVYGNIVS-DNKLLNKNHIIPLEG-VSQESRSDNERVRNGWQILSALKSFTVLAASQTEKNEWQNHI 136 (288)
T ss_pred ccccccccccccchhhccccc-CHHHHhHHhcccccc-hhhhhhccccccccchhhhcccchhhhhcchhhhhHHHHHHH
Confidence 467889999888877644322 000112234455544 222222222345567888888889999999999999999888
Q ss_pred HHHHHhc
Q 035610 122 GRAIVQH 128 (144)
Q Consensus 122 ~~ai~~~ 128 (144)
.++....
T Consensus 137 ~~~~~~~ 143 (288)
T KOG1729|consen 137 TECVEDL 143 (288)
T ss_pred HHHHHHH
Confidence 8876543
No 111
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=62.18 E-value=1.4 Score=34.07 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=19.9
Q ss_pred CCceEEEEEeeCC-----CCCCceeEEEEEeC
Q 035610 26 QPGAIGPANKQGD-----YIKTWLRRWFILKQ 52 (144)
Q Consensus 26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~~ 52 (144)
...++|+|.|+.. +.+.|++|||.|++
T Consensus 282 ~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~~ 313 (313)
T cd05394 282 VHLKEGEMYKRAQGRTRIGKKNFKKRWFCLTS 313 (313)
T ss_pred hhhHHHHHHhhccCCCccccccchhheeecCC
Confidence 3468999998742 23579999999863
No 112
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=60.77 E-value=2.1 Score=33.08 Aligned_cols=27 Identities=26% Similarity=0.337 Sum_probs=19.5
Q ss_pred CCceEEEEEeeC--C---CCCCceeEEEEEeC
Q 035610 26 QPGAIGPANKQG--D---YIKTWLRRWFILKQ 52 (144)
Q Consensus 26 ~~~~~G~L~k~~--~---~~~~w~~R~fvL~~ 52 (144)
...++|.+.|+. . +.+.|++|||.|++
T Consensus 279 ~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 279 ILLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred chhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 446899999853 1 23479999999863
No 113
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=56.32 E-value=2.5 Score=32.65 Aligned_cols=26 Identities=23% Similarity=0.176 Sum_probs=19.2
Q ss_pred CCceEEEEEeeCC-----CCCCceeEEEEEe
Q 035610 26 QPGAIGPANKQGD-----YIKTWLRRWFILK 51 (144)
Q Consensus 26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~ 51 (144)
...++|++.++.. +.+.||+|||.|+
T Consensus 285 ~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 285 VVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred hhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 4568999888741 3457999999874
No 114
>KOG4095 consensus Uncharacterized conserved protein (tumor-specific protein BCL7 in humans) [General function prediction only]
Probab=53.96 E-value=6.9 Score=26.89 Aligned_cols=22 Identities=14% Similarity=0.486 Sum_probs=19.5
Q ss_pred CCCceeEEEEEeCCeEEEEecC
Q 035610 40 IKTWLRRWFILKQGEHFWFKDS 61 (144)
Q Consensus 40 ~~~w~~R~fvL~~~~l~y~k~~ 61 (144)
.+.|.++|+.+.+..|.+||--
T Consensus 28 VRrWEKKwVtvgDTslRIyKWV 49 (165)
T KOG4095|consen 28 VRRWEKKWVTVGDTSLRIYKWV 49 (165)
T ss_pred HHHHhhheEeecccceEEEEee
Confidence 4689999999999999999853
No 115
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=52.20 E-value=3.9 Score=31.88 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=18.5
Q ss_pred CCceEEEEEeeCC-----CCC-CceeEEEEEe
Q 035610 26 QPGAIGPANKQGD-----YIK-TWLRRWFILK 51 (144)
Q Consensus 26 ~~~~~G~L~k~~~-----~~~-~w~~R~fvL~ 51 (144)
-..++|.+.|+.. ..+ .|++|||.|+
T Consensus 302 ~~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 302 VTVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred chhhhhHhhhccccCCCCcccccccceeeecC
Confidence 4468999998742 123 5999999874
No 116
>cd01229 PH_etc2 Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain. Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=51.70 E-value=69 Score=21.29 Aligned_cols=56 Identities=14% Similarity=0.066 Sum_probs=35.9
Q ss_pred ceEEeCCceEEEeeccccCCCCceEEEE--eC----CeEEEEE-cCCHHHHHHHHHHHHHHHH
Q 035610 71 RGFIPVGTCLTVKCAEDVLNKPFAFEHS--RG----GYTMYSV-ADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 71 ~~~i~L~~~~~v~~~~~~~~~~~~f~I~--~~----~~~~~l~-a~s~~e~~~Wi~al~~ai~ 126 (144)
...++|+.+..|....+..+-++.|.+. .+ +.-|-|. +.-+.+...|+..|.+.+.
T Consensus 66 i~lmpLs~IkrVvdI~DtE~c~~aF~L~~R~p~d~~~~L~sF~l~~Ee~~K~~~Lk~Lcr~~A 128 (129)
T cd01229 66 IHLMPLSQIKKVLDIRDTEDCHNAFALLVRPPTEQANVLLSFQMTSEELPKEVWLKMLCRHVA 128 (129)
T ss_pred EEEeEhHHeEEEEeeeccccccceeEEEEeCCccchheEEEEEecCCcchHHHHHHHHHHHhc
Confidence 3567788877776665533445666665 22 3344443 6677788899999988763
No 117
>PF08671 SinI: Anti-repressor SinI; InterPro: IPR010981 The SinR repressor is part of a group of Sin (sporulation inhibition) proteins in Bacillus subtilis that regulate the commitment to sporulation in response to extreme adversity []. SinR is a tetrameric repressor protein that binds to the promoters of genes essential for entry into sporulation and prevents their transcription. This repression is overcome through the activity of SinI, which disrupts the SinR tetramer through the formation of a SinI-SinR heterodimer, thereby allowing sporulation to proceed. The SinR structure consists of two domains: a dimerisation domain stabilised by a hydrophobic core, and a DNA-binding domain that is identical to domains of the bacteriophage 434 CI and Cro proteins that regulate prophage induction. The dimerisation domain is a four-helical bundle formed from two helices from the C-terminal residues of SinR and two helices from the central residues of SinI. These regions in SinR and SinI are similar in both structure and sequence. The interaction of SinR monomers to form tetramers is weaker than between SinR and SinI, since SinI can effectively disrupt SinR tetramers. This entry represents the dimerisation domain in both SinI and SinR proteins.; GO: 0005488 binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1B0N_A 2YAL_A.
Probab=50.04 E-value=4.2 Score=20.07 Aligned_cols=23 Identities=22% Similarity=0.367 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHhcCCCCCcceeEec
Q 035610 115 GERINSIGRAIVQHSRSVTESEVVEY 140 (144)
Q Consensus 115 ~~Wi~al~~ai~~~~~~~~~~~~~~~ 140 (144)
.+|+.-|+.|+ ..+++..++..|
T Consensus 3 ~EW~~Li~eA~---~~Gls~eeir~F 25 (30)
T PF08671_consen 3 EEWVELIKEAK---ESGLSKEEIREF 25 (30)
T ss_dssp HHHHHHHHHHH---HTT--HHHHHHH
T ss_pred HHHHHHHHHHH---HcCCCHHHHHHH
Confidence 47999999988 334554444443
No 118
>PF14784 ECIST_Cterm: C-terminal domain of the ECSIT protein
Probab=49.14 E-value=78 Score=21.15 Aligned_cols=16 Identities=6% Similarity=0.044 Sum_probs=14.7
Q ss_pred cCCHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGR 123 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ 123 (144)
..+...+.+||..|++
T Consensus 96 ~~~~~sL~~WI~~Lq~ 111 (126)
T PF14784_consen 96 TSDKDSLLSWIRGLQE 111 (126)
T ss_pred CCCHHHHHHHHHHHHh
Confidence 6788999999999998
No 119
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=44.41 E-value=3.9 Score=34.28 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=28.0
Q ss_pred CCceEEEEEeeCC-CC-CCceeEEEEEeC-CeEEEEecCC
Q 035610 26 QPGAIGPANKQGD-YI-KTWLRRWFILKQ-GEHFWFKDSH 62 (144)
Q Consensus 26 ~~~~~G~L~k~~~-~~-~~w~~R~fvL~~-~~l~y~k~~~ 62 (144)
-|.+.|.|.|+.+ .. +.|++.|+.|.. +.|.||-+-.
T Consensus 301 IPIKQg~LlKrSgk~L~keWKKKYVtlcsnG~LtYh~sL~ 340 (749)
T KOG0705|consen 301 IPIKQGMLLKRSGKSLNKEWKKKYVTLCSNGVLTYHPSLG 340 (749)
T ss_pred cchhhhhHHHhcchHHHHHHhhhheeeccCcceeecccHH
Confidence 4678999999854 34 899999999875 6677776543
No 120
>PF14470 bPH_3: Bacterial PH domain
Probab=41.01 E-value=81 Score=18.99 Aligned_cols=76 Identities=12% Similarity=0.053 Sum_probs=53.7
Q ss_pred CceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHH
Q 035610 42 TWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKGERINSI 121 (144)
Q Consensus 42 ~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al 121 (144)
....-.+++.+..|.++.... . .......++++.+..+..... -....+.|.++++.+-+..-+..+.+.-++.|
T Consensus 20 ~~~~g~l~~TnkRlif~~~~~-~--~~~~~~~i~y~~I~~v~~~~g--~~~~~i~i~~~~~~~~i~~i~k~~~~~~~~~i 94 (96)
T PF14470_consen 20 TSFPGVLVLTNKRLIFYSKGM-F--GGKKFESIPYDDITSVSFKKG--ILGGKITIETNGEKIKIDNIQKGDVKEFYEYI 94 (96)
T ss_pred cCceeEEEEeCCEEEEEEccc-C--CCceEEEEEhhheEEEEEEcc--ccccEEEEEECCEEEEEEEcCHHHHHHHHHHH
Confidence 455667889999988887652 0 235568888998877755432 22355888888888888877888888777766
Q ss_pred H
Q 035610 122 G 122 (144)
Q Consensus 122 ~ 122 (144)
+
T Consensus 95 ~ 95 (96)
T PF14470_consen 95 K 95 (96)
T ss_pred h
Confidence 5
No 121
>PF14844 PH_BEACH: PH domain associated with Beige/BEACH; PDB: 1MI1_B 1T77_C.
Probab=33.20 E-value=1.2e+02 Score=18.86 Aligned_cols=51 Identities=18% Similarity=0.126 Sum_probs=33.4
Q ss_pred CCCcceEEeCCceEEEeeccccCCCCceEEEEe-CCeEEEEEcCCHHHHHHHH
Q 035610 67 GSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR-GGYTMYSVADTEKEKGERI 118 (144)
Q Consensus 67 ~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~-~~~~~~l~a~s~~e~~~Wi 118 (144)
.......++++.+..+..-.- .-++.+++|.. .+++++|.-++.+++++=.
T Consensus 51 ~~~~~~~w~~~~I~~v~~RRy-llr~~AlEiF~~dg~s~f~~F~~~~~R~~v~ 102 (106)
T PF14844_consen 51 SKPKSKRWPLSDIKEVHKRRY-LLRDTALEIFFSDGRSYFFNFESKKERDEVY 102 (106)
T ss_dssp ---TCEEEEGGGEEEEEEEEE-TTEEEEEEEEETTS-EEEEE-SSHHHHHHHH
T ss_pred cCCceEEEEHHHhHHHHHHHh-cCcceEEEEEEcCCcEEEEEcCCHHHHHHHH
Confidence 345567888888777654332 34568899996 5678888888999887644
No 122
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]
Probab=28.97 E-value=39 Score=29.87 Aligned_cols=98 Identities=12% Similarity=0.041 Sum_probs=56.7
Q ss_pred ceEEEEEeeCCC--CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEE--------eeccccCCCCceEEE
Q 035610 28 GAIGPANKQGDY--IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTV--------KCAEDVLNKPFAFEH 97 (144)
Q Consensus 28 ~~~G~L~k~~~~--~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v--------~~~~~~~~~~~~f~I 97 (144)
.+.||+...... ...|-.-|-.++-....+|.... --+-..+.-.|++..-.-+ ...++.+..-+.+.|
T Consensus 813 rmnGwlRVyRdd~~~stwl~~wammdl~~~~fy~~~g-adple~p~f~idlnkeqw~Lrtgqe~~~~v~dimrvfnvliI 891 (1265)
T KOG0976|consen 813 RMNGWLRVYRDDAEASTWLLGWAMMDLEGDDFYDMNG-ADPLEDPVFLIDLNKEQWALRTGQESLTHVPDIMRVFNVLII 891 (1265)
T ss_pred hcccceeeeccccchhHHHHHHHHhhhcccchhhccC-CccccCceEEeecchhHHHHHhccccccCCcchhhhheeeee
Confidence 367888776432 23566666666655555555432 0011234445555431111 111121222255556
Q ss_pred EeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 98 SRGGYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 98 ~~~~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
....+.+++.|+++..+.+|-.+|+.+-.
T Consensus 892 K~~~r~l~I~ap~~~saerwA~CLq~aqk 920 (1265)
T KOG0976|consen 892 KDLERLLMIAAPSPKSAERWALCLQDAQK 920 (1265)
T ss_pred cchhhhheeecCCCccHHHHHHHHHHHHH
Confidence 67889999999999999999999998754
No 123
>KOG3518 consensus Putative guanine nucleotide exchange factor [General function prediction only]
Probab=27.27 E-value=65 Score=25.52 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=29.6
Q ss_pred CCceEEEE---eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 91 KPFAFEHS---RGGYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 91 ~~~~f~I~---~~~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.|-.|+|. .+.-++.|.|.+.++..-|+..|++.|-.
T Consensus 395 eplsfqv~~fdnpkaq~~fma~sme~kr~wm~elkrlild 434 (521)
T KOG3518|consen 395 EPLSFQVFHFDNPKAQHTFMAKSMEDKRLWMLELKRLILD 434 (521)
T ss_pred CCceeEEEecCCcchhhhhhhhhhHHHHHHHHHHHHHHHh
Confidence 44668877 35567889999999999999999986654
No 124
>KOG2674 consensus Cysteine protease required for autophagy - Apg4p/Aut2p [Cytoskeleton; Intracellular trafficking, secretion, and vesicular transport]
Probab=26.72 E-value=3.5e+02 Score=21.97 Aligned_cols=26 Identities=4% Similarity=0.038 Sum_probs=22.3
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHH
Q 035610 99 RGGYTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 99 ~~~~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
.|+=.+-|+|.+.+|.+.|...+++.
T Consensus 328 DPS~alGF~c~~~~dF~~~c~~l~k~ 353 (409)
T KOG2674|consen 328 DPSLALGFYCKDEDDFDNLCSELKKS 353 (409)
T ss_pred CcceEEEEEecCHHHHHHHHHHHHHH
Confidence 45566778999999999999999985
No 125
>KOG4277 consensus Uncharacterized conserved protein, contains thioredoxin domain [General function prediction only]
Probab=25.19 E-value=1.8e+02 Score=22.87 Aligned_cols=49 Identities=16% Similarity=0.291 Sum_probs=35.3
Q ss_pred CCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcCCCCCcceeEec
Q 035610 90 NKPFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEY 140 (144)
Q Consensus 90 ~~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~~~~~~~~~~ 140 (144)
..|+.|.+.+.+..|++.-.+...++ |..|-+-+.+.+.++.+..++-|
T Consensus 314 s~P~l~i~NtsnqeYfLse~d~qikn--iedilqFientsegI~d~TieA~ 362 (468)
T KOG4277|consen 314 SEPHLFIFNTSNQEYFLSEDDPQIKN--IEDILQFIENTSEGIDDETIEAF 362 (468)
T ss_pred cCCeEEEEecCchheeeccCChhhhh--HHHHHHHHhcccccccccceeec
Confidence 44677888888889999766666544 46666667777888887777655
No 126
>PF10882 bPH_5: Bacterial PH domain; InterPro: IPR020482 This entry contains membrane proteins with no known function.
Probab=25.10 E-value=1.7e+02 Score=17.92 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=20.2
Q ss_pred CCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 035610 91 KPFAFEHSRGGYTMYSVADTEKEKGERINSIGR 123 (144)
Q Consensus 91 ~~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ 123 (144)
..+.+.|.+.++.|++.+++.++ .+++|++
T Consensus 69 ~~~~i~I~t~~~~y~isp~~~~~---fi~~l~~ 98 (100)
T PF10882_consen 69 NKNVILIKTKDKTYVISPEDPEE---FIEALKK 98 (100)
T ss_pred CCCEEEEEECCceEEEcCCCHHH---HHHHHHh
Confidence 34667788888889987776654 4445543
No 127
>PF12456 hSac2: Inositol phosphatase ; InterPro: IPR022158 This domain family is found in eukaryotes, and is approximately 120 amino acids in length. The family is found in association with PF02383 from PFAM. hSac2 functions as an inositol polyphosphate 5-phosphatase.
Probab=24.58 E-value=2e+02 Score=18.57 Aligned_cols=73 Identities=14% Similarity=0.018 Sum_probs=45.6
Q ss_pred CCceEEEEEeeCCCCC---CceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-------cCCCCceE
Q 035610 26 QPGAIGPANKQGDYIK---TWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------VLNKPFAF 95 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~---~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-------~~~~~~~f 95 (144)
.....||+...-.... .-+.|-+.|++..++..+-.- .......-..|+|..+..+..+.- ......+|
T Consensus 29 e~~i~gW~L~~~~~~~~~~~e~E~vlLLTd~alyi~~YD~-~~~kv~~~~ri~L~~I~~I~~G~~~~s~~s~~~~~~~g~ 107 (115)
T PF12456_consen 29 EEFIGGWLLTEPDHWNKTENEEERVLLLTDKALYICKYDF-IMEKVSQFQRIPLNDIDKIQIGTFITSTLSLDKRKNYGF 107 (115)
T ss_pred CcEEEEEEEEecCcccCCCcccceEEEEecCEEEEEEecC-CCccEEEEEEEecccCcEEEEeccCCCCCcCCcccCcEE
Confidence 4557899887754445 778999999999988655432 111223456778888777654421 12334667
Q ss_pred EEEe
Q 035610 96 EHSR 99 (144)
Q Consensus 96 ~I~~ 99 (144)
.|..
T Consensus 108 rI~y 111 (115)
T PF12456_consen 108 RIFY 111 (115)
T ss_pred EEEE
Confidence 6664
No 128
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=22.54 E-value=62 Score=28.72 Aligned_cols=91 Identities=10% Similarity=-0.021 Sum_probs=57.2
Q ss_pred eEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610 29 AIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS 106 (144)
Q Consensus 29 ~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l 106 (144)
++|++.++ +.....|.++|.+++...+.|.+... ......|......... ..+....+..|.+....+.+.+
T Consensus 177 ~~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~-----~~~~~~Il~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 250 (887)
T KOG1329|consen 177 KAGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR-----IGGWFPILDNDGKPHQ-KGSNESLRLGFTPMEKDRNLKL 250 (887)
T ss_pred cccEEEEeecCCccccceeEEEEeccchhhhhcccc-----ccceeeeeccCCcccc-CCcccceEEeeEeechhhhhhh
Confidence 57888887 23445699999999999988887543 2222222222211111 1111223355666677788888
Q ss_pred EcCCHHHHHHHHHHHHHHH
Q 035610 107 VADTEKEKGERINSIGRAI 125 (144)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ai 125 (144)
.+.+..+...|..++-...
T Consensus 251 ~~~s~~~~r~~~~~~~~~~ 269 (887)
T KOG1329|consen 251 GCKSGRSFRGWPGTIFPQR 269 (887)
T ss_pred eeccccccCCccceeeehh
Confidence 8988888888988876654
No 129
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=22.17 E-value=1.4e+02 Score=26.86 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=30.6
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEec
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKD 60 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~ 60 (144)
+..+.|.|..+....+.|-+-||||....|+|-..
T Consensus 474 nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e 508 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDE 508 (1267)
T ss_pred hhhhcceEEEecCCCCceeeeEEEEecceeEeehh
Confidence 45689999999888899999999999999988653
No 130
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=21.76 E-value=1.7e+02 Score=24.06 Aligned_cols=27 Identities=0% Similarity=-0.119 Sum_probs=23.4
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 102 YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 102 ~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+.|.|.+.+.+..+.|+++|+..+...
T Consensus 82 ~~~~~~~~~~~~~~~w~~~~~~~~~~~ 108 (481)
T PLN02958 82 KDFVFEPLSDESRRLWCQKLRDYLDSL 108 (481)
T ss_pred eeEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 568899999999999999999987543
No 131
>PF12213 Dpoe2NT: DNA polymerases epsilon N terminal; InterPro: IPR024639 This domain is found in the N-terminal of DNA polymerase epsilon subunit B proteins. It contains a single completely conserved phenylalanine residue that may be functionally important. It forms a primarily alpha helical structure in which four helices are arranged in two hairpins with connecting loops containing beta strands which form a short parallel sheet. DNA polymerase epsilon is required in DNA replication for synthesis of the leading strand. The N-terminal domain has close structural relation to AAA+ protein C-terminal domains [].; PDB: 2V6Z_M.
Probab=21.14 E-value=83 Score=18.80 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=16.5
Q ss_pred cCCHHHHHHHHHHHHHHHHhcC
Q 035610 108 ADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
.-+..++++|++.|..++....
T Consensus 34 ~~~~~e~e~~l~~Ii~~v~kq~ 55 (73)
T PF12213_consen 34 SLSEEEREDWLDKIIDAVQKQP 55 (73)
T ss_dssp TS-TTTHHHHHHHHHHHHTTS-
T ss_pred cCCHHHHHHHHHHHHHHHhcCC
Confidence 3466789999999999987654
No 132
>KOG2677 consensus Stoned B synaptic vesicle biogenesis protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.04 E-value=2.5e+02 Score=24.51 Aligned_cols=82 Identities=10% Similarity=0.069 Sum_probs=54.0
Q ss_pred CCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCceEEEeecc----ccCCCCceEEEE----eCCeE-------
Q 035610 40 IKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE----DVLNKPFAFEHS----RGGYT------- 103 (144)
Q Consensus 40 ~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~----~~~~~~~~f~I~----~~~~~------- 103 (144)
.+.|..-|+.|.++ .|+.|-.+. ..++...+.|.-|..+.+.. +.-++.|...|. ...+.
T Consensus 465 sR~WgPifvkl~~~g~LqlYyeqg----lekPf~E~~L~~~~~lSep~lqnydv~GkIHtvki~~V~YkEK~ky~pk~~v 540 (922)
T KOG2677|consen 465 SRHWGPIFVKLTDTGYLQLYYEQG----LEKPFREFKLEICHELSEPRLQNYDVNGKIHTVKIDRVTYKEKKKYQPKPAV 540 (922)
T ss_pred hccccceEEEEcCCceEEEeeccc----ccchHHHHhhhhhhccCchhhhccccccceeEEEEEEEEeehhcccCCCCcc
Confidence 46899999999875 888666665 67788888887766543321 223555665553 11111
Q ss_pred ---------EEEEcCCHHHHHHHHHHHHHHH
Q 035610 104 ---------MYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 104 ---------~~l~a~s~~e~~~Wi~al~~ai 125 (144)
+-|..-+..+....|.+.+.-+
T Consensus 541 ~H~a~~eq~lKlGstny~dfl~FittVed~L 571 (922)
T KOG2677|consen 541 AHTAEREQVLKLGSTNYDDFLSFITTVEDRL 571 (922)
T ss_pred ccchhhhhhhhccCCcHHHHHHHHHHHHHHH
Confidence 2255778888999999988754
No 133
>PF07315 DUF1462: Protein of unknown function (DUF1462); InterPro: IPR009190 There are currently no experimental data for members of this group of bacterial proteins or their homologues. A crystal structure of Q7A6J8 from SWISSPROT revealed a thioredoxin-like fold, its core consisting of three layers alpha/beta/alpha.; PDB: 1XG8_A.
Probab=20.86 E-value=1.1e+02 Score=19.31 Aligned_cols=17 Identities=24% Similarity=0.167 Sum_probs=12.1
Q ss_pred EcCCHHHHHHHHHHHHH
Q 035610 107 VADTEKEKGERINSIGR 123 (144)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ 123 (144)
.++|.++..+|+++...
T Consensus 14 n~PsSkeTyeWL~aal~ 30 (93)
T PF07315_consen 14 NAPSSKETYEWLEAALK 30 (93)
T ss_dssp SS--HHHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHh
Confidence 37899999999987654
No 134
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=20.78 E-value=1.6e+02 Score=21.89 Aligned_cols=25 Identities=28% Similarity=0.318 Sum_probs=22.1
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 102 YTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 102 ~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
++.+++|++.+++-+|+.-|+.++.
T Consensus 249 g~~~iaapsREdave~l~iik~a~~ 273 (290)
T COG4026 249 GTVYIAAPSREDAVEELEIIKEAIE 273 (290)
T ss_pred eeeeeecCchHHHHHHHHHHHHHHH
Confidence 4678999999999999999999864
Done!