Query 035610
Match_columns 144
No_of_seqs 119 out of 1045
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 07:05:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035610.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035610hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pls_A Pleckstrin homology dom 99.9 9.4E-24 3.2E-28 137.4 15.7 102 25-130 3-105 (113)
2 1wi1_A Calcium-dependent activ 99.9 1.9E-24 6.5E-29 142.8 11.6 99 26-128 7-112 (126)
3 1x1f_A Signal-transducing adap 99.9 1E-23 3.5E-28 144.1 14.7 99 27-129 18-116 (149)
4 1fao_A Dual adaptor of phospho 99.9 2.1E-23 7.2E-28 138.2 15.1 102 24-130 15-116 (126)
5 1wgq_A FYVE, rhogef and PH dom 99.9 3.5E-23 1.2E-27 134.0 15.8 99 24-127 5-104 (109)
6 2dn6_A KIAA0640 protein; PH do 99.9 1.3E-23 4.3E-28 137.0 13.6 101 24-128 5-105 (115)
7 1v89_A Hypothetical protein KI 99.9 3.8E-23 1.3E-27 135.0 14.8 101 24-128 5-114 (118)
8 1v88_A Oxysterol binding prote 99.9 1.7E-23 6E-28 140.1 13.3 96 25-127 6-125 (130)
9 1v5u_A SBF1, SET binding facto 99.9 1.8E-23 6.2E-28 136.6 12.9 101 24-128 5-113 (117)
10 1fgy_A GRP1; PH domain, signal 99.9 5.7E-23 2E-27 135.9 15.3 100 24-129 2-123 (127)
11 2dhk_A TBC1 domain family memb 99.9 6.1E-23 2.1E-27 135.1 13.4 99 24-129 5-107 (119)
12 2cod_A Centaurin-delta 1; ARF 99.9 1.3E-22 4.3E-27 132.5 14.6 96 25-129 6-102 (115)
13 1dyn_A Dynamin; signal transdu 99.9 3.8E-23 1.3E-27 135.4 11.5 98 26-128 11-119 (125)
14 2rsg_A Collagen type IV alpha- 99.9 5.1E-23 1.7E-27 130.0 11.8 91 28-124 2-92 (94)
15 1v5p_A Pleckstrin homology dom 99.9 7.4E-23 2.5E-27 136.3 13.1 101 26-126 14-120 (126)
16 2i5f_A Pleckstrin; PH domain, 99.9 1.7E-22 5.7E-27 130.4 13.7 98 24-125 4-108 (109)
17 1x05_A Pleckstrin; PH domain, 99.9 1.8E-22 6.1E-27 134.2 13.8 104 21-128 12-122 (129)
18 1eaz_A Tandem PH domain contai 99.9 2.5E-22 8.7E-27 132.5 13.7 102 24-129 11-114 (125)
19 2coc_A FYVE, rhogef and PH dom 99.9 2.1E-22 7.1E-27 131.5 13.0 100 23-127 4-107 (112)
20 2w2x_D 1-phosphatidylinositol- 99.9 5.9E-23 2E-27 136.3 10.3 105 24-128 9-121 (124)
21 3aj4_A Pleckstrin homology dom 99.9 1.1E-22 3.8E-27 132.2 11.2 98 25-126 3-111 (112)
22 1btk_A Bruton'S tyrosine kinas 99.9 1.6E-22 5.4E-27 141.0 11.9 104 26-129 2-135 (169)
23 1u5d_A SKAP55, SRC kinase-asso 99.9 1.6E-22 5.5E-27 130.0 11.1 98 26-127 2-106 (108)
24 1x1g_A Pleckstrin 2; PH domain 99.9 1.6E-22 5.4E-27 134.4 11.1 110 15-128 6-126 (129)
25 2dkp_A Pleckstrin homology dom 99.9 1.1E-21 3.9E-26 129.9 15.2 99 25-127 19-120 (128)
26 2d9v_A Pleckstrin homology dom 99.9 5.1E-22 1.7E-26 132.7 13.0 101 25-129 6-117 (130)
27 3cxb_B Pleckstrin homology dom 99.9 7.2E-22 2.5E-26 128.9 13.4 95 29-127 2-102 (112)
28 4a6h_A Phosphatidylinositol 4, 99.9 9.6E-22 3.3E-26 129.9 14.0 98 27-125 6-117 (120)
29 1u5f_A SRC-associated adaptor 99.9 8E-22 2.7E-26 134.2 13.9 103 24-130 14-123 (148)
30 2d9y_A Pleckstrin homology dom 99.9 1.9E-21 6.5E-26 126.9 14.3 99 26-128 10-111 (117)
31 3rcp_A Pleckstrin homology dom 99.9 7.7E-22 2.6E-26 126.4 12.0 94 29-128 1-95 (103)
32 2lul_A Tyrosine-protein kinase 99.9 1.3E-21 4.5E-26 135.7 14.0 107 24-133 12-128 (164)
33 1upq_A PEPP1; PH domain, phosp 99.9 1.4E-21 4.9E-26 128.6 13.3 98 27-128 11-111 (123)
34 2da0_A 130-kDa phosphatidylino 99.9 2.7E-21 9.2E-26 126.3 14.4 97 25-130 8-105 (114)
35 1wg7_A Dedicator of cytokinesi 99.9 1.7E-21 5.8E-26 132.7 12.7 99 24-127 15-125 (150)
36 2y7b_A Actin-binding protein a 99.9 6.5E-22 2.2E-26 132.2 10.2 102 25-127 3-129 (134)
37 2yry_A Pleckstrin homology dom 99.9 9.1E-21 3.1E-25 124.6 15.6 97 26-126 21-120 (122)
38 2p0d_A RHO GTPase-activating p 99.9 2.3E-21 7.9E-26 129.5 12.8 102 26-128 11-126 (129)
39 2d9x_A Oxysterol binding prote 99.9 6.3E-22 2.1E-26 130.3 9.6 100 24-129 5-107 (120)
40 1unq_A RAC-alpha serine/threon 99.9 8.6E-22 3E-26 130.3 8.6 100 25-128 6-112 (125)
41 1u5e_A SRC-associated adaptor 99.9 7E-21 2.4E-25 136.9 12.9 99 25-127 104-209 (211)
42 1wjm_A Beta-spectrin III; PH d 99.9 6.4E-21 2.2E-25 125.9 10.8 103 25-128 6-119 (123)
43 2cof_A Protein KIAA1914; PH do 99.9 3.5E-21 1.2E-25 124.3 9.4 96 24-126 5-101 (107)
44 1btn_A Beta-spectrin; signal t 99.8 7.1E-21 2.4E-25 122.2 8.8 95 29-124 1-106 (106)
45 2j59_M RHO-GTPase activating p 99.8 2E-20 7E-25 129.7 11.2 99 26-126 2-111 (168)
46 3tfm_A Myosin X; split PH doma 99.8 2.6E-20 8.7E-25 135.4 11.9 97 24-127 55-156 (228)
47 2r09_A Cytohesin-3; autoinhibi 99.8 1.1E-19 3.8E-24 139.4 15.4 99 23-127 209-329 (347)
48 3lju_X ARF-GAP with dual PH do 99.8 8E-20 2.7E-24 141.9 12.9 101 24-128 266-374 (386)
49 2rlo_A Centaurin-gamma 1; spli 99.8 2E-19 6.9E-24 119.6 11.7 101 26-127 3-125 (128)
50 1qqg_A IRS-1, insulin receptor 99.8 7.9E-20 2.7E-24 135.4 10.5 96 24-128 7-114 (264)
51 3a8p_A T-lymphoma invasion and 99.8 2E-19 6.9E-24 133.2 12.2 103 25-128 9-126 (263)
52 1dro_A Beta-spectrin; cytoskel 99.8 4.9E-20 1.7E-24 121.6 8.0 102 25-127 6-120 (122)
53 3pp2_A RHO GTPase-activating p 99.8 1.2E-18 4.2E-23 115.4 12.9 102 25-126 6-123 (124)
54 2dtc_A RAL guanine nucleotide 99.8 3.3E-18 1.1E-22 113.3 14.5 102 28-131 2-117 (126)
55 2q13_A DCC-interacting protein 99.8 1.3E-18 4.4E-23 135.0 12.3 97 25-128 276-377 (385)
56 3lju_X ARF-GAP with dual PH do 99.8 1E-18 3.5E-23 135.7 11.0 96 26-126 145-246 (386)
57 2rov_A RHO-associated protein 99.8 4.5E-18 1.5E-22 111.7 10.2 97 29-126 3-115 (117)
58 3tca_A Amyloid beta A4 precurs 99.8 3.6E-18 1.2E-22 127.4 10.2 98 25-126 166-276 (291)
59 4h8s_A DCC-interacting protein 99.8 4.9E-18 1.7E-22 132.6 10.7 97 25-128 299-400 (407)
60 2fjl_A 1-phosphatidylinositol- 99.7 5.2E-17 1.8E-21 109.8 13.3 99 28-126 2-148 (150)
61 2d9w_A Docking protein 2; PH d 99.7 1.5E-16 5.2E-21 104.0 13.7 104 24-128 9-123 (127)
62 2ys3_A UNC-112-related protein 99.7 5.2E-17 1.8E-21 108.0 10.4 97 25-126 7-112 (137)
63 4ejn_A RAC-alpha serine/threon 99.6 3.4E-15 1.2E-19 117.1 7.4 97 26-126 5-108 (446)
64 3hk0_A Growth factor receptor- 99.6 5.9E-14 2E-18 103.2 13.3 99 25-127 130-241 (256)
65 3a8n_A TIAM-1, T-lymphoma inva 99.5 1.9E-14 6.5E-19 106.9 8.8 102 25-127 9-125 (279)
66 4f7h_A Fermitin family homolog 99.5 2.6E-13 8.9E-18 92.5 13.1 104 26-134 46-156 (173)
67 4bbk_A Kindlin-1, fermitin fam 99.5 5.5E-13 1.9E-17 90.0 12.8 105 25-134 24-135 (165)
68 4gmv_A RAS-associated and plec 99.5 1.9E-13 6.6E-18 101.6 11.3 98 25-126 156-266 (281)
69 2coa_A Protein kinase C, D2 ty 99.5 6.4E-13 2.2E-17 86.7 11.5 100 24-127 5-120 (125)
70 1w1g_A HPDK1, 3-phosphoinositi 99.5 4.7E-13 1.6E-17 90.4 10.1 91 26-128 51-141 (151)
71 2d9z_A Protein kinase C, NU ty 99.4 5.1E-12 1.7E-16 82.7 12.8 101 24-128 5-125 (129)
72 1v61_A RAC/CDC42 guanine nucle 99.1 1.6E-09 5.4E-14 72.1 11.3 104 24-129 25-129 (132)
73 1zc3_B Exocyst complex protein 98.9 7.5E-08 2.6E-12 62.4 13.1 100 27-127 8-108 (113)
74 1v5m_A SH2 and PH domain-conta 98.9 8.1E-08 2.8E-12 63.1 12.3 100 25-128 16-132 (136)
75 3ml4_A Protein DOK-7; tyrosine 98.7 9.1E-08 3.1E-12 68.2 9.9 99 25-125 7-112 (224)
76 3qwm_A Iqsec1, IQ motif and SE 98.6 1.1E-06 3.7E-11 58.7 12.3 84 42-127 32-123 (140)
77 3tfm_A Myosin X; split PH doma 98.5 2.2E-07 7.6E-12 67.0 7.3 39 24-62 18-56 (228)
78 3mpx_A FYVE, rhogef and PH dom 98.3 3E-06 1E-10 66.2 9.5 95 28-128 245-339 (434)
79 1mai_A Phospholipase C delta-1 98.3 1.4E-05 4.7E-10 52.8 11.3 83 44-128 29-123 (131)
80 1dbh_A Protein (human SOS 1); 98.3 6.9E-06 2.4E-10 62.5 11.2 97 26-127 246-350 (354)
81 2pz1_A RHO guanine nucleotide 98.3 2.2E-05 7.6E-10 61.9 13.5 104 24-128 331-442 (466)
82 2dfk_A Collybistin II; DH doma 98.3 2.8E-05 9.7E-10 60.3 13.9 102 25-127 255-364 (402)
83 2vrw_B P95VAV, VAV1, proto-onc 98.2 3.3E-05 1.1E-09 59.8 12.6 102 25-129 232-338 (406)
84 3ky9_A Proto-oncogene VAV; cal 98.1 2.5E-05 8.7E-10 63.4 11.5 102 25-129 404-510 (587)
85 2lg1_A A-kinase anchor protein 98.1 3.9E-05 1.3E-09 53.6 10.2 99 25-128 69-174 (185)
86 3zvr_A Dynamin-1; hydrolase, D 98.1 5.8E-05 2E-09 63.1 12.1 97 27-128 540-647 (772)
87 3t06_A PDZ-rhogef, RHO guanine 98.0 0.00019 6.4E-09 55.7 13.0 101 25-130 293-412 (418)
88 1xcg_A PDZ-rhogef, RHO guanine 98.0 0.00028 9.7E-09 53.7 13.6 98 25-127 251-367 (368)
89 2z0q_A XPLN, RHO guanine nucle 97.9 9.8E-05 3.3E-09 55.9 10.4 89 28-125 233-345 (346)
90 1kz7_A Guanine nucleotide exch 97.9 0.00021 7.2E-09 54.4 12.1 101 25-128 208-327 (353)
91 1nty_A Triple functional domai 97.9 0.00024 8.3E-09 53.0 12.2 100 26-128 202-310 (311)
92 3p6a_A RHO guanine nucleotide 97.9 0.00022 7.6E-09 54.5 12.0 99 26-128 258-373 (377)
93 1txd_A RHO guanine nucleotide 97.9 0.00036 1.2E-08 53.6 12.6 99 26-128 256-371 (385)
94 3jzy_A Intersectin 2; C2 domai 97.8 2.2E-06 7.6E-11 68.0 0.0 97 27-128 253-364 (510)
95 3odw_A RHO guanine nucleotide 97.8 0.00028 9.6E-09 56.7 12.2 100 26-130 411-528 (536)
96 2rgn_B RHOA/RAC/CDC42 exchange 97.7 0.0008 2.8E-08 51.2 12.3 100 26-128 206-320 (354)
97 3ksy_A SOS-1, SON of sevenless 97.7 0.00033 1.1E-08 60.5 10.9 96 25-125 442-545 (1049)
98 3v5w_A G-protein coupled recep 97.5 0.0039 1.3E-07 51.6 14.0 94 24-125 556-651 (689)
99 1foe_A T-lymphoma invasion and 97.4 0.0079 2.7E-07 45.9 13.7 102 26-128 237-368 (377)
100 2adz_A Alpha-1-syntrophin; pro 96.5 0.019 6.6E-07 39.6 8.5 55 72-126 121-177 (178)
101 1z87_A Alpha-1-syntrophin; pro 96.5 0.027 9.4E-07 41.2 9.8 54 72-125 206-261 (263)
102 1fho_A UNC-89; pleckstrin homo 96.0 0.092 3.1E-06 33.8 9.0 99 23-124 6-110 (119)
103 2zkm_X 1-phosphatidylinositol- 92.5 1.3 4.5E-05 37.3 10.6 78 44-128 34-137 (799)
104 3qr0_A Phospholipase C-beta (P 92.1 2.6 9E-05 35.6 11.9 90 32-126 27-142 (816)
105 3ohm_B 1-phosphatidylinositol- 90.5 3 0.0001 35.6 10.8 93 29-127 22-140 (885)
106 3a58_A Exocyst complex compone 89.4 2.9 0.0001 31.1 8.6 96 41-141 132-232 (320)
107 3a98_B Engulfment and cell mot 86.2 6.7 0.00023 27.3 12.5 82 45-126 50-150 (203)
108 3hie_A Protein PSL1, exocyst c 86.2 6.1 0.00021 26.9 10.4 86 41-130 62-152 (171)
109 2rrf_A Zinc finger FYVE domain 84.8 6.3 0.00021 25.7 8.1 77 43-126 34-127 (141)
110 3ulb_A Target of rapamycin com 67.9 21 0.00071 22.8 12.3 82 43-127 27-115 (121)
111 2p82_A Cysteine protease ATG4A 21.4 2.7E+02 0.0091 21.0 7.3 38 100-139 312-349 (355)
112 2x5r_A Hypothetical protein OR 21.1 61 0.0021 19.6 2.1 33 90-122 88-123 (127)
113 1xg8_A Hypothetical protein SA 20.5 79 0.0027 19.6 2.6 17 107-123 24-40 (111)
No 1
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.92 E-value=9.4e-24 Score=137.44 Aligned_cols=102 Identities=20% Similarity=0.322 Sum_probs=89.3
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-eE
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-YT 103 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~~ 103 (144)
.++.++|||.|+|+..+.|++|||+|.++.|+||+++. +..+.+.|+|.++..+....+...++++|.|.+++ +.
T Consensus 3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~ 78 (113)
T 1pls_A 3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKS----DNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQD 78 (113)
T ss_dssp CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTT----CSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEE
T ss_pred CCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCC----CCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCE
Confidence 35779999999998889999999999999999999987 78899999999987765344445678999999876 89
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610 104 MYSVADTEKEKGERINSIGRAIVQHSR 130 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai~~~~~ 130 (144)
|+|+|+|.+++++|+.+|+.++.....
T Consensus 79 ~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 105 (113)
T 1pls_A 79 HFFQAAFLEERDAWVRDINKAIKCIEG 105 (113)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCHHHHHHHHHHHHHHHhccch
Confidence 999999999999999999999876543
No 2
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.92 E-value=1.9e-24 Score=142.79 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=84.4
Q ss_pred CCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEe----cCCCCCCCCCcceEEeCCceEEEe--eccccCCCCceEEEE
Q 035610 26 QPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFK----DSHNITRGSTPRGFIPVGTCLTVK--CAEDVLNKPFAFEHS 98 (144)
Q Consensus 26 ~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k----~~~~~~~~~~~~~~i~L~~~~~v~--~~~~~~~~~~~f~I~ 98 (144)
++.++|||.|+|+ ..+.|++|||||.++.|+||+ ++. +..|.|+|.|.+++... +.++...++++|.+.
T Consensus 7 n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~----~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v 82 (126)
T 1wi1_A 7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREK----KAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAV 82 (126)
T ss_dssp CEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSS----SSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEE
T ss_pred CCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEccccccc----CCCCceEEECCCcEEEEecCCcccccCceEEEEe
Confidence 4579999999986 568999999999999999999 776 78899999999965421 223335688999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 99 RGGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 99 ~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.++++|+|+|+|++|++.||.+|.+|+.+.
T Consensus 83 ~~~~ty~~~Adseee~~~WikAi~~A~~~~ 112 (126)
T 1wi1_A 83 KEGDTVIFASDDEQDRILWVQAMYRATGQS 112 (126)
T ss_dssp CSSCEEEEECSSHHHHHHHHHHHHHHHTCS
T ss_pred cCCceEEEEcCCHHHHHHHHHHHHHHhccc
Confidence 988899999999999999999999998643
No 3
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.92 E-value=1e-23 Score=144.15 Aligned_cols=99 Identities=8% Similarity=-0.045 Sum_probs=85.6
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEE
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYS 106 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l 106 (144)
..++|||.|+|+..+.|++|||||+++.|+||+++. +..+.+.|+|.++..+..........++|.|.+++++|+|
T Consensus 18 v~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~----d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f 93 (149)
T 1x1f_A 18 LYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKK----SIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQL 93 (149)
T ss_dssp EEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSS----CSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEE
T ss_pred ccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCC----ccccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEE
Confidence 569999999999899999999999999999999987 7788899999997766333222245689999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHHHhcC
Q 035610 107 VADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+|+|.+|+++||.+|+.++....
T Consensus 94 ~A~s~ee~~eWi~aI~~v~~~~~ 116 (149)
T 1x1f_A 94 KTENTESGEEWRGFILTVTELSV 116 (149)
T ss_dssp ECSSHHHHHHHHHHHHHHHHSSC
T ss_pred EcCCHHHHHHHHHHHHHHHcccC
Confidence 99999999999999999886443
No 4
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.91 E-value=2.1e-23 Score=138.23 Aligned_cols=102 Identities=27% Similarity=0.350 Sum_probs=89.8
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYT 103 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~ 103 (144)
...+.++|||.|+++..+.|++|||+|.++.|+||+++. +..+.+.|+|.++..+...+. .+++++|.|.++++.
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~-~~~~~~F~i~~~~r~ 89 (126)
T 1fao_A 15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQM----SPEPIRILDLTECSAVQFDYS-QERVNCFCLVFPFRT 89 (126)
T ss_dssp CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEEGGGCCEEEEECS-SSSSSEEEEEETTEE
T ss_pred CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCC----CCCceeEEEccceEEEEeccc-CCCCCEEEEEeCCcE
Confidence 446789999999998889999999999999999999987 788999999999877665443 467899999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610 104 MYSVADTEKEKGERINSIGRAIVQHSR 130 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai~~~~~ 130 (144)
|+|.|+|.+++++|+.+|+.++.....
T Consensus 90 ~~l~a~s~~e~~~Wi~al~~~i~~~~~ 116 (126)
T 1fao_A 90 FYLCAKTGVEADEWIKILRWKLSQIRK 116 (126)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999977443
No 5
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.91 E-value=3.5e-23 Score=133.99 Aligned_cols=99 Identities=15% Similarity=0.184 Sum_probs=86.0
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-e
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-Y 102 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~ 102 (144)
..++.++|||.|+++..+.|++|||||+++.|+||+++. +..+.+.|+|.++..+...+. ..++++|.|.+++ +
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~----~~~~~~~i~L~~~~~~~~~~~-~~~~~~F~i~~~~~~ 79 (109)
T 1wgq_A 5 SSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASE----DVAALESQPLLGFTVTLVKDE-NSESKVFQLLHKGMV 79 (109)
T ss_dssp CCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTT----CSSCSEEEECSSEEEEECCCS-SCSSSEEEEEETTEE
T ss_pred CCCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----cCccCceEECCCCEEEECCCC-CCCCcEEEEEeCCCe
Confidence 346779999999998889999999999999999999987 778999999999877654443 3567999999876 5
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 103 TMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.|+|+|+|.+++++||.+|+.|+..
T Consensus 80 ~~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 80 FYVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCHHHHHHHHHHHHHHhcc
Confidence 7999999999999999999998743
No 6
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=1.3e-23 Score=136.96 Aligned_cols=101 Identities=25% Similarity=0.219 Sum_probs=89.2
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYT 103 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~ 103 (144)
...+.++|||.|+++..+.|++|||||.++.|+||+++. +..+.+.|+|.++..|...++...++++|.|.++++.
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~ 80 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSED----LKDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKT 80 (115)
T ss_dssp CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTT----CSSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCE
T ss_pred CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCC----CcccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCE
Confidence 456789999999998889999999999999999999887 6789999999987666555443467899999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 104 MYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|+|+|+|.+++++|+.+|+.++...
T Consensus 81 ~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 81 FEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988654
No 7
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.91 E-value=3.8e-23 Score=135.03 Aligned_cols=101 Identities=24% Similarity=0.412 Sum_probs=87.2
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEe---
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSR--- 99 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~--- 99 (144)
...+.++|||.|+++..+.|++|||||.++.|+||+++. +..+.+.|+|.++..+..... ...++++|.|.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~ 80 (118)
T 1v89_A 5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEE----DTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASW 80 (118)
T ss_dssp SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSS----CCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCC
T ss_pred CCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCC----CCCceEEEECCCCEEEEcCcCcccCCcceEEEECCcc
Confidence 346779999999998889999999999999999999987 788999999999776543322 245689999998
Q ss_pred -----CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 100 -----GGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 100 -----~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+.+.|+|+|+|.+|+++|+.+|+.++...
T Consensus 81 ~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 114 (118)
T 1v89_A 81 DQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSG 114 (118)
T ss_dssp SSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred ccccCCCcEEEEECCCHHHHHHHHHHHHHHHccC
Confidence 77899999999999999999999998644
No 8
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.91 E-value=1.7e-23 Score=140.07 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=81.0
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC---
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG--- 101 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~--- 101 (144)
....++|||.|+| ..+.|++|||||+++.|+||+++. +..+.|.|+|.++..+. ..+ ..++++|.|.++.
T Consensus 6 ~~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~----~~~p~G~I~L~~~~v~~-~~~-~~~~~~F~i~~~~~~~ 78 (130)
T 1v88_A 6 SGIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQK----NGQWVGTVLLNACEIIE-RPS-KKDGFCFKLFHPLEQS 78 (130)
T ss_dssp SSCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSS----SCCCCEEEECSSCEECC-CCT-TTSSCEEEEECTTCCC
T ss_pred CceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCC----CCCceEEEEcCCCEEEE-CCC-CCCCeEEEEEcCCccc
Confidence 3567999999998 789999999999999999999987 78899999999976542 222 2456999999653
Q ss_pred ---------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 102 ---------------------YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 102 ---------------------~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
+.|+|+|+|++|+++||++|+.++..
T Consensus 79 i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~ 125 (130)
T 1v88_A 79 IWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS 125 (130)
T ss_dssp CSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred cccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 23889999999999999999999854
No 9
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.91 E-value=1.8e-23 Score=136.60 Aligned_cols=101 Identities=16% Similarity=0.281 Sum_probs=87.3
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEe--CCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc------cCCCCceE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILK--QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED------VLNKPFAF 95 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~--~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~------~~~~~~~f 95 (144)
...+.++|||.|+++..+.|++|||||. ++.|+||+++. +..+.+.|+|..+..+...+. ...++++|
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F 80 (117)
T 1v5u_A 5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRM----DTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFF 80 (117)
T ss_dssp CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSS----CSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCE
T ss_pred cCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCC----CCccceEEEccCcEEEeecCccccccccCCCCeEE
Confidence 4567899999999988899999999999 88999999987 678999999999887754431 13455899
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 96 EHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 96 ~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.|.++++.|+|+|+|.+++++||.+|+.++...
T Consensus 81 ~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 113 (117)
T 1v5u_A 81 DVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSG 113 (117)
T ss_dssp EEEESSCEEEEECSSHHHHHHHHHHHHTTCCCC
T ss_pred EEECCCceEEEECCCHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999987543
No 10
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.91 E-value=5.7e-23 Score=135.91 Aligned_cols=100 Identities=31% Similarity=0.467 Sum_probs=86.4
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC--
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-- 101 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-- 101 (144)
+.++.++|||.|+|+..+.|++|||||.++.|+||+++. +..+.|.|+|.++..+ ...+ ..++++|.|.+++
T Consensus 2 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~-~~~~-~~~~~~f~i~~~~~~ 75 (127)
T 1fgy_A 2 FFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSIR-EVLD-PRKPNCFELYNPSHK 75 (127)
T ss_dssp CSSCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEE-EECC-SSCSSEEEEECSSST
T ss_pred CCCCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCC----CCCcceEEECCceEEE-EccC-CCCCceEEEecCCcc
Confidence 467899999999998889999999999999999999887 6789999999997544 3333 3678999998653
Q ss_pred --------------------eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 102 --------------------YTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 102 --------------------~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+.|+|+|+|.+|+++||.+|+.++....
T Consensus 76 ~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 123 (127)
T 1fgy_A 76 GQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDP 123 (127)
T ss_dssp TCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHCT
T ss_pred ccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccCC
Confidence 6899999999999999999999986543
No 11
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=6.1e-23 Score=135.13 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=86.4
Q ss_pred ecCCceEEEEEeeCC--CCCCceeEEEEEeCC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610 24 WSQPGAIGPANKQGD--YIKTWLRRWFILKQG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR 99 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~--~~~~w~~R~fvL~~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~ 99 (144)
..++.++|||.|+++ ..+.|++|||||.++ .|+||+++. +..+.|.|+|.++..+... ...+++|.|.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~----~~~~~g~I~L~~~~~~~~~---~~~~~~F~i~~ 77 (119)
T 2dhk_A 5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQ----DANPLDSIDLSSAVFDCKA---DAEEGIFEIKT 77 (119)
T ss_dssp CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTT----CCSCSEEEEGGGCEEEECT---TGGGCEEEEEC
T ss_pred CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCC----CcccccEEECCCCEEEecC---CCCCCEEEEEe
Confidence 467789999999986 678999999999998 999999987 6789999999998776532 24568999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 100 GGYTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+++.|+|+|+|.+++++||.+|+.++....
T Consensus 78 ~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 107 (119)
T 2dhk_A 78 PSRVITLKAATKQAMLYWLQQLQMKRWEFH 107 (119)
T ss_dssp SSCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999886543
No 12
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.90 E-value=1.3e-22 Score=132.52 Aligned_cols=96 Identities=19% Similarity=0.242 Sum_probs=85.3
Q ss_pred cCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeE
Q 035610 25 SQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYT 103 (144)
Q Consensus 25 ~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~ 103 (144)
..+.++|||.|+++ ..+.|++|||+|.++.|.||+++. +..+.+.|+|..+..|...+ +++|.|.++++.
T Consensus 6 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~~v~~~~-----~~~F~i~~~~r~ 76 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEK----EMYSKGIIPLSAISTVRVQG-----DNKFEVVTTQRT 76 (115)
T ss_dssp SCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSC----CSSCCCEEETTTEEEEEEET-----TTEEEEEESSCC
T ss_pred CCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCC----CcccCCEEECCcceEEEeCC-----CCEEEEEeCCcE
Confidence 35679999999987 778999999999999999999987 67899999999987665433 589999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 104 MYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
|+|.|+|.+++++||.+|+.++....
T Consensus 77 ~~l~a~s~~e~~~Wi~~l~~~~~~~~ 102 (115)
T 2cod_A 77 FVFRVEKEEERNDWISILLNALKSQS 102 (115)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEECCCHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999996543
No 13
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.90 E-value=3.8e-23 Score=135.43 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=81.6
Q ss_pred CCceEEEEEee-CCCCC-CceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCC-
Q 035610 26 QPGAIGPANKQ-GDYIK-TWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGG- 101 (144)
Q Consensus 26 ~~~~~G~L~k~-~~~~~-~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~- 101 (144)
.++++|||.|+ ++..+ .|++|||||++.+|+||+++. +..++|+|+|.++ .+...++ ...++|+|.|..++
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~----eke~~G~IpL~~~-~vr~v~~~~~~rk~~F~l~~~d~ 85 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----EKEKKYMLSVDNL-KLRDVEKGFMSSKHIFALFNTEQ 85 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTT----CSCEEEEEECTTE-EEEECCSCSSSSCEEEEEEETTS
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCc----ccccceEEECCCc-eEeccCCCCCCCceEEEEECCCC
Confidence 36799999995 66676 499999999999999999998 8999999999994 4454443 34788999999764
Q ss_pred -------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 102 -------YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 102 -------~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
++|.|.|+|.+|+++|+++|.+|-.-+
T Consensus 86 r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra~v~p 119 (125)
T 1dyn_A 86 RNVYKDYRQLELACETQEEVDSWKASFLRAGVYP 119 (125)
T ss_dssp SCSSTTCSSEEEEESSHHHHHHHHHHHHHTTCEE
T ss_pred ccccccceEEEEeCCCHHHHHHHHHHHHhCccCc
Confidence 489999999999999999997754433
No 14
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.90 E-value=5.1e-23 Score=130.01 Aligned_cols=91 Identities=21% Similarity=0.327 Sum_probs=78.6
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
.++|||.|+|+..+.|++|||||.++.|.||+++.+ ....+.+.++|.++..+.. ...+++|.|.+++++|+|+
T Consensus 2 ~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~--~~~~~~~~i~l~~~~~~~~----~~~~~~F~i~~~~r~~~l~ 75 (94)
T 2rsg_A 2 ERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDE--TEYGCRGSICLSKAVITPH----DFDECRFDISVNDSVWYLR 75 (94)
T ss_dssp CEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTG--GGTCCSEEEETTTCEEEEC----SSCSSEEEEEETTEEEEEE
T ss_pred CEEEEEEEeCCCCCCceEEEEEEECCEEEEEEeccc--ccccceeeEecceeeeecC----cccceeEEEEeCCeEEEEE
Confidence 689999999999999999999999999999998751 1245789999999655432 2456899999999999999
Q ss_pred cCCHHHHHHHHHHHHHH
Q 035610 108 ADTEKEKGERINSIGRA 124 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~a 124 (144)
|+|++|+++||++|++|
T Consensus 76 A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 76 AQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp CCSSCCTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhh
Confidence 99999999999999986
No 15
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.90 E-value=7.4e-23 Score=136.32 Aligned_cols=101 Identities=19% Similarity=0.306 Sum_probs=81.8
Q ss_pred CCceEEEEEeeC-CCCCCceeEEEEEe---CCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEe
Q 035610 26 QPGAIGPANKQG-DYIKTWLRRWFILK---QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSR 99 (144)
Q Consensus 26 ~~~~~G~L~k~~-~~~~~w~~R~fvL~---~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~ 99 (144)
+..++|||.|+| ...+.|++|||||+ +..|+||+++........+.|.|+|..+..|.... ....++++|.|.+
T Consensus 14 ~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t 93 (126)
T 1v5p_A 14 QNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINA 93 (126)
T ss_dssp CCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEEC
T ss_pred CCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEEC
Confidence 445799999998 67899999999999 55677778732111267899999999977776543 2345679999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 100 GGYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+.++|+|+|+|++|+++||++|+.|+.
T Consensus 94 ~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 94 LSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999764
No 16
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.90 E-value=1.7e-22 Score=130.44 Aligned_cols=98 Identities=24% Similarity=0.287 Sum_probs=81.9
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccc----cCCCCceEEE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----VLNKPFAFEH 97 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~----~~~~~~~f~I 97 (144)
..++.++|||.|+++..+.|++|||||.++ .|.||+++. +..+.+.|+|.++..+..... ..+++++|.|
T Consensus 4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i 79 (109)
T 2i5f_A 4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEI 79 (109)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTS----CSSCSEEEECTTCEEEEECC--------CCSEEEE
T ss_pred cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCC----CCCccEEEECCCCEEEEccCCcccccCCCceEEEE
Confidence 456779999999998889999999999986 999999887 788999999999765433222 1237899999
Q ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 98 SRGG-YTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 98 ~~~~-~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
.+++ +.|+|+|+|.+++++|+.+|+.++
T Consensus 80 ~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 80 ITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp ECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9886 569999999999999999999986
No 17
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.90 E-value=1.8e-22 Score=134.20 Aligned_cols=104 Identities=25% Similarity=0.291 Sum_probs=86.9
Q ss_pred ceeecCCceEEEEEeeCCCCCCceeEEEEEeCC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccc----cCCCCce
Q 035610 21 IEFWSQPGAIGPANKQGDYIKTWLRRWFILKQG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----VLNKPFA 94 (144)
Q Consensus 21 ~~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~----~~~~~~~ 94 (144)
.+....+.++|||.|+++..+.|++|||||.++ .|+||+++. +..+.+.|+|.+|..+..... ..+++++
T Consensus 12 ~~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~ 87 (129)
T 1x05_A 12 EEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRGCVVTSVESNSNGRKSEEENL 87 (129)
T ss_dssp STTCSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSC----CSSCSEEEECTTCEEEECCCCCCSSSCSSCSE
T ss_pred ccccCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCC----CCcceeEEEccCCEEEEccCCccccccCCCeE
Confidence 345667889999999998889999999999976 899999887 788999999999765433222 1237899
Q ss_pred EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 95 FEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 95 f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|.|.+++ +.|+|+|+|.+++++||.+|+.++...
T Consensus 88 F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 88 FEIITADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp EEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 9999875 669999999999999999999998654
No 18
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=2.5e-22 Score=132.53 Aligned_cols=102 Identities=28% Similarity=0.383 Sum_probs=88.9
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEEeCC
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHSRGG 101 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~~~~ 101 (144)
.....++|||.|+++..+.|++|||+|.++.|+||+++. +..+.+.|+|.++..+.... +...++++|.|.+++
T Consensus 11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~ 86 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSEL----EKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS 86 (125)
T ss_dssp -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTT----CSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSS
T ss_pred CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCC----CCcceeEEEcccceEEeeccccccCCcCCEEEEEeCC
Confidence 456779999999998889999999999999999999987 78899999999987765432 223678999999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 102 YTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 102 ~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+.|+|+|+|.+++++|+.+|+.++....
T Consensus 87 r~~~l~a~s~~e~~~W~~al~~~i~~~~ 114 (125)
T 1eaz_A 87 RTFYVQADSPEEMHSWIKAVSGAIVAQR 114 (125)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999987643
No 19
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=2.1e-22 Score=131.53 Aligned_cols=100 Identities=15% Similarity=0.168 Sum_probs=84.0
Q ss_pred eecCCceEEEEEeeCCCCCCceeEEEEEeCC---eEEEEecCCCCCCCCCcceEEeCCceEEEee-ccccCCCCceEEEE
Q 035610 23 FWSQPGAIGPANKQGDYIKTWLRRWFILKQG---EHFWFKDSHNITRGSTPRGFIPVGTCLTVKC-AEDVLNKPFAFEHS 98 (144)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~---~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~-~~~~~~~~~~f~I~ 98 (144)
...+..++|||.|++. .+.|++|||||+++ .|+||+++. +..+.+.|+|.+|..... ..+...++++|+|.
T Consensus 4 ~~~~~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~----d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~ 78 (112)
T 2coc_A 4 GSSGSLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQ----DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQ 78 (112)
T ss_dssp CCSSSSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTT----CSSSCSEECGGGCEEECCCSSSCCSSSEEEEEE
T ss_pred ccCCceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCC----ccCcceEEEcCCCEEEecCcccccCCCCEEEEe
Confidence 3456678899999865 78999999999985 699999987 788999999999765431 22234578999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 99 RGGYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 99 ~~~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.+.+.|+|+|+|.+++++||++|+.|+..
T Consensus 79 ~~~~~y~f~A~s~e~~~~Wl~al~~A~~~ 107 (112)
T 2coc_A 79 WAKQSWYLSASSAELQQQWLETLSTAAHS 107 (112)
T ss_dssp ETTEEEEEEESSHHHHHHHHHHHHHHHSC
T ss_pred cCCeEEEEEcCCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999998743
No 20
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.89 E-value=5.9e-23 Score=136.35 Aligned_cols=105 Identities=18% Similarity=0.150 Sum_probs=81.1
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-----CCCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-----ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS 98 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-----~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~ 98 (144)
...+.++|||.|++...+.|++|||||+++.|+||+++.. ......+.|.|+|.+|..+...++...++++|+|.
T Consensus 9 ~~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~ 88 (124)
T 2w2x_D 9 KDEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFILE 88 (124)
T ss_dssp ----CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEEE
T ss_pred hhhcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEEE
Confidence 4467899999999988999999999999999999997420 00113458999999987654444335688999999
Q ss_pred eCC---eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 99 RGG---YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 99 ~~~---~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
++. +.|+|+|+|.+++++||.+|++++...
T Consensus 89 ~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 89 PKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp ECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred CCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 753 679999999999999999999987543
No 21
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.89 E-value=1.1e-22 Score=132.15 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=80.5
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEE-eCCeEEEEecCCCCCCCCCcceEEeCCceE-------EEee--ccccCCCCce
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFIL-KQGEHFWFKDSHNITRGSTPRGFIPVGTCL-------TVKC--AEDVLNKPFA 94 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL-~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~-------~v~~--~~~~~~~~~~ 94 (144)
..+.++|||.|+|+..+.|++||||| .++.|.||+++. +..+.+.|+|.... .+.. .++...++++
T Consensus 3 ~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~----~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~ 78 (112)
T 3aj4_A 3 MAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQT----RQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCM 78 (112)
T ss_dssp CSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTT----CCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGE
T ss_pred cceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCC----CCCCCccccccccceeecccccccccCCCCCCCcCcE
Confidence 35779999999998889999999999 889999999987 67889999887644 2211 2222233689
Q ss_pred EEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 95 FEHSRG-GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 95 f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
|.|.++ ++.|+|+|+|.+|+++||.+|+.|..
T Consensus 79 F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 79 LQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp EEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 999965 79999999999999999999999863
No 22
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.89 E-value=1.6e-22 Score=141.00 Aligned_cols=104 Identities=15% Similarity=0.183 Sum_probs=82.8
Q ss_pred CCceEEEEEeeCC-----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec---cc-cCCC-----
Q 035610 26 QPGAIGPANKQGD-----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA---ED-VLNK----- 91 (144)
Q Consensus 26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~---~~-~~~~----- 91 (144)
.++++|||.|++. ..+.|++|||||+++.|.||+++.+...+..++|.|+|.++..|... ++ ...+
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~ 81 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR 81 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence 3579999999863 24689999999999999999983100015789999999998776554 22 1122
Q ss_pred ----------------CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 92 ----------------PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 92 ----------------~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+++|+|.+++++|+|+|+|.+|+++||++|+.++....
T Consensus 82 ~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~n~ 135 (169)
T 1btk_A 82 GEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYNS 135 (169)
T ss_dssp ------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTTCS
T ss_pred cCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHCc
Confidence 28999999999999999999999999999999996544
No 23
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=1.6e-22 Score=129.99 Aligned_cols=98 Identities=15% Similarity=0.273 Sum_probs=83.1
Q ss_pred CCceEEEEEeeCCCC----CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec--cccCCCCceEEEEe
Q 035610 26 QPGAIGPANKQGDYI----KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA--EDVLNKPFAFEHSR 99 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~----~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~--~~~~~~~~~f~I~~ 99 (144)
++.++|||.|+++.. +.|++|||+|.++.|+||+++. +..+.+.|+|.++..+... .....++++|.|.+
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~ 77 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEK----SKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTS 77 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEEC
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCC----CCCCCEEEEecceEEEeCCccccccCCcceEEEEc
Confidence 467999999997432 8999999999999999999987 7789999999998754322 12235679999998
Q ss_pred CC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 100 GG-YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 100 ~~-~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
++ +.|+|+|+|.+++++|+.+|+.++..
T Consensus 78 ~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 78 QDRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp SSSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 87 89999999999999999999999864
No 24
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=1.6e-22 Score=134.41 Aligned_cols=110 Identities=19% Similarity=0.221 Sum_probs=88.6
Q ss_pred CCCCCCceeecCCceEEEEEeeCCCCCCceeEEEEEe--CCeEEEEecC-CCCCCCCCcceEEeCCceEEEeeccc----
Q 035610 15 PVDYKGIEFWSQPGAIGPANKQGDYIKTWLRRWFILK--QGEHFWFKDS-HNITRGSTPRGFIPVGTCLTVKCAED---- 87 (144)
Q Consensus 15 ~~~~~~~~~~~~~~~~G~L~k~~~~~~~w~~R~fvL~--~~~l~y~k~~-~~~~~~~~~~~~i~L~~~~~v~~~~~---- 87 (144)
+...+.++...++.++|||.|++...+.|++|||||. +..|+||+++ . +..+++.|+|.+|..+...+.
T Consensus 6 s~~~~~~~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~----~~~~~g~i~L~~~~v~~~~~~~~p~ 81 (129)
T 1x1g_A 6 SGSLSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKE----ENRPVGGFSLRGSLVSALEDNGVPT 81 (129)
T ss_dssp CSCSCCCTTCSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSC----CSSCSCCEESTTCCCEECCSSSSCS
T ss_pred ccCccccccCCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCc----CCccceEEECcCCEEEEeCCCCCcc
Confidence 3345556667788899999999988899999999999 4699999986 4 678999999998654322221
Q ss_pred c---CCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 88 V---LNKPFAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 88 ~---~~~~~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
. ..++++|.|.+++ +.|+|+|+|.+|+++||.+|+.++.++
T Consensus 82 ~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 126 (129)
T 1x1g_A 82 GVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSGP 126 (129)
T ss_dssp SCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSSSS
T ss_pred cccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 0 1157999999886 579999999999999999999988654
No 25
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.89 E-value=1.1e-21 Score=129.95 Aligned_cols=99 Identities=25% Similarity=0.354 Sum_probs=84.4
Q ss_pred cCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEeCC-
Q 035610 25 SQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSRGG- 101 (144)
Q Consensus 25 ~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~~~- 101 (144)
....++|||.|+++ ..+.|++|||||.++.|+||+++. +..+.+.|+|..+...... .+...++++|.|.+++
T Consensus 19 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~ 94 (128)
T 2dkp_A 19 APVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEK----EEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNM 94 (128)
T ss_dssp SCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----CCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSS
T ss_pred CCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCC----CcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCC
Confidence 45679999999987 788999999999999999999987 7789999999987554322 2234678999999875
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 102 YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 102 ~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
+.|+|+|+|.+|+++|+.+|+.|+..
T Consensus 95 r~~~l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 95 RTYYFCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998753
No 26
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.88 E-value=5.1e-22 Score=132.70 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=81.3
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEE-eCCeEEEEecCCCCCCCCCcceEEeCCc-eEEEee--------ccccCCCCce
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFIL-KQGEHFWFKDSHNITRGSTPRGFIPVGT-CLTVKC--------AEDVLNKPFA 94 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL-~~~~l~y~k~~~~~~~~~~~~~~i~L~~-~~~v~~--------~~~~~~~~~~ 94 (144)
....++|||.|+++..+.|++||||| +++.|.||+++. +..+.+.|.+.. +..+.. ..+...++++
T Consensus 6 ~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~----~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~ 81 (130)
T 2d9v_A 6 SGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDET----AQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGL 81 (130)
T ss_dssp CCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSS----TTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTE
T ss_pred CceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCC----CCCcCceEecccceeEEeccccccccCCCCCCCcCcE
Confidence 35569999999998889999999999 899999999986 667888887763 222221 1122456799
Q ss_pred EEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 95 FEHSRG-GYTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 95 f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
|.|.++ .++|+|+|+|.+|+++||++|+.++..+.
T Consensus 82 F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~~~ 117 (130)
T 2d9v_A 82 LTVNLREGSRLHLCAETRDDAIAWKTALMEANSTPA 117 (130)
T ss_dssp EEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTCCC
T ss_pred EEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcCCC
Confidence 999985 48999999999999999999999986543
No 27
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.88 E-value=7.2e-22 Score=128.90 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=78.4
Q ss_pred eEEEEEeeCC----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEE-eeccccCCCCceEEEEeC-Ce
Q 035610 29 AIGPANKQGD----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTV-KCAEDVLNKPFAFEHSRG-GY 102 (144)
Q Consensus 29 ~~G~L~k~~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v-~~~~~~~~~~~~f~I~~~-~~ 102 (144)
++|||.++++ ..+.|++|||||+++.|+||+++. +..+.+.|+|.+..+. ....+...++|+|+|.++ .+
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~----~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~ 77 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRT----DVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRP 77 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSS----CCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSC
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCC----CCCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCC
Confidence 7999997743 578999999999999999999987 7788999999975332 122233578899999965 67
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 103 TMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.|+|+|+|++++++||.+|+.++..
T Consensus 78 ~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 78 CLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999998854
No 28
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.88 E-value=9.6e-22 Score=129.85 Aligned_cols=98 Identities=10% Similarity=0.129 Sum_probs=80.9
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccC-------CCCceEEEEe
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL-------NKPFAFEHSR 99 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~-------~~~~~f~I~~ 99 (144)
++++|||.|++...+.|++|||||+++.|+||++++ ...+..|.++|+|.+|......++.. ...+.|.|..
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~-~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~ 84 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTAD-RKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHA 84 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCC-TTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEE
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCC-cCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEe
Confidence 789999999999999999999999999999999875 22356699999999987765443321 2678899986
Q ss_pred CC-------eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 100 GG-------YTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 100 ~~-------~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
.+ +.|+|.|+|.+|+++|+++|+.++
T Consensus 85 ~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 85 KQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp SSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 54 589999999999999999999865
No 29
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.88 E-value=8e-22 Score=134.21 Aligned_cols=103 Identities=13% Similarity=0.139 Sum_probs=83.8
Q ss_pred ecCCceEEEEEeeCCC----CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEE
Q 035610 24 WSQPGAIGPANKQGDY----IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEH 97 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~----~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I 97 (144)
..++.++|||.|+++. .+.|++|||||.++.|+||+++. +..+.|.|+|.++..+.... ....++++|.|
T Consensus 14 ~~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I 89 (148)
T 1u5f_A 14 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEI 89 (148)
T ss_dssp CSSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECTTSCSSTTGGGEEEE
T ss_pred CCCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCC----CcccceEEEcCCcEEEECCCcccCCCCccEEEE
Confidence 3577899999999854 36999999999999999999987 77899999999976543221 12355699999
Q ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610 98 SRGG-YTMYSVADTEKEKGERINSIGRAIVQHSR 130 (144)
Q Consensus 98 ~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~~~ 130 (144)
.+++ +.|+|+|+|.+++++||.+|+.++.....
T Consensus 90 ~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 123 (148)
T 1u5f_A 90 CAPDKRIYQFTAASPKDAEEWVQQLKFILQDLGS 123 (148)
T ss_dssp ECTTSCEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred ECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 9986 89999999999999999999999866544
No 30
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=1.9e-21 Score=126.91 Aligned_cols=99 Identities=24% Similarity=0.409 Sum_probs=83.1
Q ss_pred CCceEEEEEeeC-CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeec-cccCCCCceEEEEe-CCe
Q 035610 26 QPGAIGPANKQG-DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA-EDVLNKPFAFEHSR-GGY 102 (144)
Q Consensus 26 ~~~~~G~L~k~~-~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~-~~~~~~~~~f~I~~-~~~ 102 (144)
...++|||.|++ ...+.|++|||+|.++.|+||+++. +..+.+.|+|.++...... .+...++++|.|.+ ..+
T Consensus 10 ~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r 85 (117)
T 2d9y_A 10 PVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----EESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVR 85 (117)
T ss_dssp CCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTT----CCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSC
T ss_pred CeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCC----CCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCc
Confidence 456999999998 4778999999999999999999987 7789999999997643222 23356789999975 468
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 103 TMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.|+|+|+|.+++++||.+|+.++...
T Consensus 86 ~~~l~a~s~~e~~~Wi~al~~~~~~~ 111 (117)
T 2d9y_A 86 TYFFSAESPEEQEAWIQAMGEAARVQ 111 (117)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCCT
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999987533
No 31
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.88 E-value=7.7e-22 Score=126.35 Aligned_cols=94 Identities=18% Similarity=0.323 Sum_probs=78.2
Q ss_pred eEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-CeEEEEE
Q 035610 29 AIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-GYTMYSV 107 (144)
Q Consensus 29 ~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~~~~~l~ 107 (144)
++|||.|+|+..+.|++|||||.++.|+||+++.+ ....++|.|+|.++... ... ..+++|.|.++ +++|+|+
T Consensus 1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~--~~~~~~g~i~L~~~~v~-~~~---~~~~~F~i~~~~~r~~~l~ 74 (103)
T 3rcp_A 1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDD--VCKGSKGSIKMAVCEIK-VHS---ADNTRMELIIPGEQHFYMK 74 (103)
T ss_dssp CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC-----CCCSCEEEGGGCEEE-CCT---TCSSEEEEEETTTEEEEEE
T ss_pred CceEEEEccCCCCCeeceEEEEECCEEEEEecCCc--ccCCcccEEEeeeeEEE-EcC---CCCceEEEEeCCCCEEEEE
Confidence 48999999998999999999999999999999861 11358999999885543 222 24789999987 7999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhc
Q 035610 108 ADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|+|.+|+++|+.+|+.|+...
T Consensus 75 a~s~~e~~~Wi~al~~a~~~~ 95 (103)
T 3rcp_A 75 AVNAAERQRWLVALGSSKASL 95 (103)
T ss_dssp CSSHHHHHHHHHHHHTTSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999987543
No 32
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.88 E-value=1.3e-21 Score=135.67 Aligned_cols=107 Identities=13% Similarity=0.193 Sum_probs=86.6
Q ss_pred ecCCceEEEEEeeCCC-----CCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-----cCCCCc
Q 035610 24 WSQPGAIGPANKQGDY-----IKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-----VLNKPF 93 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~-----~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-----~~~~~~ 93 (144)
..+.+++|||.|++.. .++|++|||||+++.|.||+++. ....+.|.|+|..+..|....+ .....+
T Consensus 12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~---~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~ 88 (164)
T 2lul_A 12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRA---EKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKY 88 (164)
T ss_dssp CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCS---SSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCS
T ss_pred CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccC---cccccccEEEEeeeEEEEeccccccCcccccce
Confidence 3467799999999742 35799999999999999999875 1345789999999877655432 134568
Q ss_pred eEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcCCCCC
Q 035610 94 AFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQHSRSVT 133 (144)
Q Consensus 94 ~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~~~ 133 (144)
+|.|.+++++|+|+|+|++|+++||++|++++........
T Consensus 89 ~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~~~~ 128 (164)
T 2lul_A 89 PFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNNIMI 128 (164)
T ss_dssp EEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCSCCCS
T ss_pred eEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHChhhhh
Confidence 9999999999999999999999999999999976554433
No 33
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.88 E-value=1.4e-21 Score=128.63 Aligned_cols=98 Identities=24% Similarity=0.348 Sum_probs=82.5
Q ss_pred CceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc-ccCCCCceEEEEeCC-eE
Q 035610 27 PGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-DVLNKPFAFEHSRGG-YT 103 (144)
Q Consensus 27 ~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~-~~~~~~~~f~I~~~~-~~ 103 (144)
+.++|||.|+++ ..+.|++|||+|.++.|+||+++. +..+.+.|+|.++....... ...+++++|.|.+++ +.
T Consensus 11 ~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~----~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~ 86 (123)
T 1upq_A 11 VHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSR----EESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRT 86 (123)
T ss_dssp EEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTT----CCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCC
T ss_pred ceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCC----CcccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeE
Confidence 458999999985 778999999999999999999987 78899999999965433222 224578999999876 89
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 104 MYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|+|+|+|.+++++|+.+|+.++...
T Consensus 87 ~~l~a~s~~e~~~Wi~al~~a~~~~ 111 (123)
T 1upq_A 87 YVLAADTLEDLRGWLRALGRASRAE 111 (123)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC--
T ss_pred EEEECCCHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998543
No 34
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=2.7e-21 Score=126.26 Aligned_cols=97 Identities=20% Similarity=0.145 Sum_probs=80.9
Q ss_pred cCCceEEEEEeeCCCC-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeE
Q 035610 25 SQPGAIGPANKQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYT 103 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~ 103 (144)
..+.++|||.|++... +.|++|||||+++.|.||+++. ..+.+.+.+..+. +...+ .++++|.|.++++.
T Consensus 8 ~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~-----~~~~~~i~l~~~~-v~~~~---~~~~~F~I~~~~r~ 78 (114)
T 2da0_A 8 YGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATS-----NRQPAKLNLLTCQ-VKPNA---EDKKSFDLISHNRT 78 (114)
T ss_dssp CCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSC-----CSCCEEEETTTSE-EEECS---SSSSCEEEEETTEE
T ss_pred CCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCC-----CCCCCEEEeeeeE-EEECC---CCCCEEEEEcCCcE
Confidence 4677999999998756 8999999999999999999975 3556667776654 33222 45689999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610 104 MYSVADTEKEKGERINSIGRAIVQHSR 130 (144)
Q Consensus 104 ~~l~a~s~~e~~~Wi~al~~ai~~~~~ 130 (144)
|+|+|+|.+|+++||.+|+.++.....
T Consensus 79 ~~l~a~s~~e~~~Wi~al~~~~~~~~~ 105 (114)
T 2da0_A 79 YHFQAEDEQDYVAWISVLTNSKEEALT 105 (114)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999877644
No 35
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.87 E-value=1.7e-21 Score=132.74 Aligned_cols=99 Identities=24% Similarity=0.293 Sum_probs=83.7
Q ss_pred ecCCceEEEEEeeC------CCCCCceeEEEEEeCC-----eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCC
Q 035610 24 WSQPGAIGPANKQG------DYIKTWLRRWFILKQG-----EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKP 92 (144)
Q Consensus 24 ~~~~~~~G~L~k~~------~~~~~w~~R~fvL~~~-----~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~ 92 (144)
...+.++|||.|++ ...+.|++|||||.++ .|.||+++. ....+.+.|+|.+|..+.... ..++
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~---~~~~~~g~I~L~~~~~~~~~~--~~~~ 89 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEK---ISKEPKGSIFLDSCMGVVQNN--KVRR 89 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSC---CSSCCSEEECTTTCCEECCCC--SSCT
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCC---CCCCcCcEEecccCEEEecCC--CCCc
Confidence 45778999999998 3457999999999997 999999874 145799999999987764322 3678
Q ss_pred ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 93 FAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 93 ~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
++|.|.+++ +.|+|+|++.+++++||.+|+.++..
T Consensus 90 ~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~ 125 (150)
T 1wg7_A 90 FAFELKMQDKSSYLLAADSEVEMEEWITILNKILQL 125 (150)
T ss_dssp TEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 999999985 89999999999999999999998764
No 36
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.87 E-value=6.5e-22 Score=132.21 Aligned_cols=102 Identities=19% Similarity=0.278 Sum_probs=82.3
Q ss_pred cCCceEEEEEee--CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEE--Eeeccc-cCCCCceEEEEe
Q 035610 25 SQPGAIGPANKQ--GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLT--VKCAED-VLNKPFAFEHSR 99 (144)
Q Consensus 25 ~~~~~~G~L~k~--~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~--v~~~~~-~~~~~~~f~I~~ 99 (144)
..+.++|||.|+ ++..+.|++|||||+++.|+||+++. ......|.|.|+|.+|.. |...++ ...++++|.|.+
T Consensus 3 ~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~-d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~ 81 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPD-DEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELIT 81 (134)
T ss_dssp CCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHH-HHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEE
T ss_pred CCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCC-cccccCceEEEEhhhCccccccccchhhccCCCEEEEEe
Confidence 357799999999 77788999999999999999999543 011478999999999764 444432 246789999986
Q ss_pred --CC------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 100 --GG------------------YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 100 --~~------------------~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
+. +.|+|+|+|.+|+++||.+|+.++..
T Consensus 82 ~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 82 VRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 32 47999999999999999999998864
No 37
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=9.1e-21 Score=124.61 Aligned_cols=97 Identities=24% Similarity=0.399 Sum_probs=81.4
Q ss_pred CCceEEEEEeeC-CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEee-ccccCCCCceEEEEeC-Ce
Q 035610 26 QPGAIGPANKQG-DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKC-AEDVLNKPFAFEHSRG-GY 102 (144)
Q Consensus 26 ~~~~~G~L~k~~-~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~-~~~~~~~~~~f~I~~~-~~ 102 (144)
...++|||.|++ ...+.|++|||||.++.|+||+++. +..+.+.|+|.++..... ..+...++++|.|.++ .+
T Consensus 21 ~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r 96 (122)
T 2yry_A 21 PVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK----EESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVR 96 (122)
T ss_dssp CEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTT----CCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSC
T ss_pred CccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCC----CCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCc
Confidence 346899999997 4778999999999999999999987 778999999999753222 1223467899999754 68
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 103 TMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
.|+|+|+|.+++++||.+|+.|+.
T Consensus 97 ~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 97 TYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999873
No 38
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.87 E-value=2.3e-21 Score=129.47 Aligned_cols=102 Identities=14% Similarity=0.218 Sum_probs=80.5
Q ss_pred CCceEEEEEee----CC--CCCCceeEEEEEeCCeEEEEecCCCCC-------CCCCcceEEeCCceEEEeeccccCCCC
Q 035610 26 QPGAIGPANKQ----GD--YIKTWLRRWFILKQGEHFWFKDSHNIT-------RGSTPRGFIPVGTCLTVKCAEDVLNKP 92 (144)
Q Consensus 26 ~~~~~G~L~k~----~~--~~~~w~~R~fvL~~~~l~y~k~~~~~~-------~~~~~~~~i~L~~~~~v~~~~~~~~~~ 92 (144)
.+.++|||.|+ ++ ..+.|++|||||+++.|+||+++.+.. .+..|.+.|+|.+|.... +.+...++
T Consensus 11 ~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~-~~~~~kr~ 89 (129)
T 2p0d_A 11 EVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAH-GRHLSSRR 89 (129)
T ss_dssp SEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEE-CTTSCSSS
T ss_pred ceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEE-CCCCCCCC
Confidence 56699999985 33 238999999999999999999983100 145789999999976543 44435778
Q ss_pred ceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 93 FAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 93 ~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|+|.|.+++ +.|+|+|+|.+|+++||.+|+.+|.+.
T Consensus 90 ~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 90 NVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp SEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 999999875 689999999999999999999998754
No 39
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=6.3e-22 Score=130.32 Aligned_cols=100 Identities=18% Similarity=0.332 Sum_probs=82.5
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEe--CCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILK--QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG 101 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~--~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~ 101 (144)
...+.++|||.|+++..+.|++|||||. ++.|.||+++.+ ....++|.|+|.++. |...+ ..+++|.|.+++
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~--~~~~~~g~I~L~~~~-v~~~~---~~~~~F~i~~~~ 78 (120)
T 2d9x_A 5 SSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQS--RNQKPRGTLQLAGAV-ISPSD---EDSHTFTVNAAS 78 (120)
T ss_dssp CSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGG--SSSCCSEEEECTTCC-EECCS---SSSSCEEECCSS
T ss_pred CCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcc--cCCCccceEEcceEE-EEecC---CCCCEEEEEcCC
Confidence 3467799999999988899999999999 579999998750 023789999999975 32222 456999999886
Q ss_pred -eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 102 -YTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 102 -~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+.|+|+|+|.+|+++||.+|+.++....
T Consensus 79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 107 (120)
T 2d9x_A 79 GEQYKLRATDAKERQHWVSRLQICTQHHT 107 (120)
T ss_dssp SCCEEECCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999887653
No 40
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.86 E-value=8.6e-22 Score=130.30 Aligned_cols=100 Identities=22% Similarity=0.298 Sum_probs=81.1
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEee--ccccCCCCceEEEEe--
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKC--AEDVLNKPFAFEHSR-- 99 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~--~~~~~~~~~~f~I~~-- 99 (144)
..+.++|||.|+|+..+.|++|||||++ +.|.||+++. +..+.+.|+|..+..+.. ......++++|.|.+
T Consensus 6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~----~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~ 81 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERP----QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQ 81 (125)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCC----CSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEE
T ss_pred CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCC----CCCCCceeEccceeEEeeeecccccCCCCEEEEEecC
Confidence 3467999999999888999999999995 6999999987 667788888887653211 111236789999985
Q ss_pred --CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 100 --GGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 100 --~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+.+.|+|+|+|.+|+++||.+|+.++...
T Consensus 82 ~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 112 (125)
T 1unq_A 82 WTTVIERTFHVETPEEREEWTTAIQTVADGL 112 (125)
T ss_dssp TTEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 46789999999999999999999988654
No 41
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.86 E-value=7e-21 Score=136.93 Aligned_cols=99 Identities=13% Similarity=0.162 Sum_probs=85.1
Q ss_pred cCCceEEEEEeeCC----CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecc--ccCCCCceEEEE
Q 035610 25 SQPGAIGPANKQGD----YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAE--DVLNKPFAFEHS 98 (144)
Q Consensus 25 ~~~~~~G~L~k~~~----~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~--~~~~~~~~f~I~ 98 (144)
.++.++|||.|+++ ..+.|++|||||+++.|+||+++. ...+.|.|+|.++..+.... ....++++|.|.
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~----~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~ 179 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK----DKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEIC 179 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEE
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCC----CccceEEEEeCCcEEEEcCCccccCCCCCEEEEE
Confidence 35779999999975 467999999999999999999987 67899999999987765432 223567999999
Q ss_pred eCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 99 RGG-YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 99 ~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
+++ +.|+|+|+|.+++++||.+|+.++..
T Consensus 180 t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 180 APDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp CSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 885 99999999999999999999999864
No 42
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.85 E-value=6.4e-21 Score=125.91 Aligned_cols=103 Identities=16% Similarity=0.214 Sum_probs=79.4
Q ss_pred cCCceEEEEEeeCCC--------CCCceeEEEEEeCCeEEEEecCCCCCCCC--CcceEEeCCceEEEeeccccCCCCce
Q 035610 25 SQPGAIGPANKQGDY--------IKTWLRRWFILKQGEHFWFKDSHNITRGS--TPRGFIPVGTCLTVKCAEDVLNKPFA 94 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~--------~~~w~~R~fvL~~~~l~y~k~~~~~~~~~--~~~~~i~L~~~~~v~~~~~~~~~~~~ 94 (144)
....++|||.|++.. .+.|++|||||+++.|+||+++.+..... .+...|+|.++.. ..+.+...++|+
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~-~~~~~~~~r~~~ 84 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQG-SVAFDYRKRKHV 84 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEE-EECTTCSSCSSE
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEE-eecccccCCCCE
Confidence 356699999998643 78999999999999999999875111111 1345688887544 333333578899
Q ss_pred EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 95 FEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 95 f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|.|.+++ +.|+|+|+|.+|+++||.+|+.++...
T Consensus 85 F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~ 119 (123)
T 1wjm_A 85 FKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASG 119 (123)
T ss_dssp EEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 9999776 899999999999999999999998654
No 43
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.85 E-value=3.5e-21 Score=124.31 Aligned_cols=96 Identities=14% Similarity=0.167 Sum_probs=77.9
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-Ce
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-GY 102 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~~ 102 (144)
..++.++|||.|+ ..+.|++|||||+++.|+||+++. ....+.+.|.|.+|. |....+ ..++++|.|.++ .+
T Consensus 5 ~~~~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~---~~~~~~~~i~l~~~~-v~~~~~-~~~~~~F~i~~~~~r 77 (107)
T 2cof_A 5 SSGLETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRN---RSKVAQQPLSLVGCE-VVPDPS-PDHLYSFRILHKGEE 77 (107)
T ss_dssp CCCCTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSST---TCSEEEEEECTTTCE-EECCCB-TTBSCEEEEEETTEE
T ss_pred CCCCcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCc---ccCCCeeEEeccceE-EEECCC-CCCCeEEEEEeCCCe
Confidence 3567899999999 678999999999999999999885 123456677777753 333333 467899999998 78
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 103 TMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
.|+|+|+|.+|+++||.+|+.++.
T Consensus 78 ~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 78 LAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHSS
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHc
Confidence 899999999999999999999763
No 44
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.84 E-value=7.1e-21 Score=122.15 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=74.8
Q ss_pred eEEEEEeeC--------CCCCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610 29 AIGPANKQG--------DYIKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS 98 (144)
Q Consensus 29 ~~G~L~k~~--------~~~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~ 98 (144)
++|||.|++ ...+.|++|||||+++.|+||+++.+. .....+...|+|.++... ...+...++++|.|.
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~-~~~~~~~~~~~F~i~ 79 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICE-VALDYKKKKHVFKLR 79 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEE-ECSSCCSSSSEEEEE
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEE-EcccccCCccEEEEE
Confidence 489999998 677899999999999999999986410 001235677888886543 233334678999999
Q ss_pred eCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 035610 99 RGG-YTMYSVADTEKEKGERINSIGRA 124 (144)
Q Consensus 99 ~~~-~~~~l~a~s~~e~~~Wi~al~~a 124 (144)
+++ ++|+|+|+|.+|+++||.+|+.|
T Consensus 80 ~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 80 LSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp CTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 765 89999999999999999999874
No 45
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.84 E-value=2e-20 Score=129.70 Aligned_cols=99 Identities=12% Similarity=0.222 Sum_probs=67.7
Q ss_pred CCceEEEEE----------eeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEE-EeeccccCCCCce
Q 035610 26 QPGAIGPAN----------KQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLT-VKCAEDVLNKPFA 94 (144)
Q Consensus 26 ~~~~~G~L~----------k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~-v~~~~~~~~~~~~ 94 (144)
++.++|||. |+|+..+.|++|||||+++.|+||+++.+ ....+.+.|+|..... +....+...++++
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~--~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~ 79 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKRE--QTTPSEEEQPISVNACLIDISYSETKRKNV 79 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTC--C--------CEECSSCEEEECSSSCSCSSE
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcc--cccccCCceEecccceEEEeccccCCCCCE
Confidence 467999999 56667889999999999999999999850 0245778877766222 2122223467899
Q ss_pred EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 95 FEHSRGGYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 95 f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
|.|.++++.|+|+|++.+|+++||.+|+.++.
T Consensus 80 F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 80 FRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp EEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998763
No 46
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.84 E-value=2.6e-20 Score=135.41 Aligned_cols=97 Identities=15% Similarity=0.316 Sum_probs=85.9
Q ss_pred ecCCceEEEEEeeCCCC-----CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610 24 WSQPGAIGPANKQGDYI-----KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS 98 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~-----~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~ 98 (144)
..++.++|||.|+++.. +.|++|||||.++.|.||+++. +..+.|.|+|.++..+.... .++++|.|.
T Consensus 55 ~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~----~~~~~g~I~L~~~~~v~~~~---~k~~~F~I~ 127 (228)
T 3tfm_A 55 KQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDS----EEKLKGTVEVRSAKEIIDNT---NKENGIDII 127 (228)
T ss_dssp CCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTT----CCSEEEEEEGGGCSEEEEET---TTTSEEEEE
T ss_pred CCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCC----CcceeEEEEcCCCEEeccCC---CCCcEEEEE
Confidence 34778999999998654 8999999999999999999987 67899999999987765432 567999999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 99 RGGYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 99 ~~~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
++++.|+|+|+|.+|+++|+.+|+.++..
T Consensus 128 t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 128 MADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp CSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred cCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999863
No 47
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.83 E-value=1.1e-19 Score=139.36 Aligned_cols=99 Identities=32% Similarity=0.493 Sum_probs=86.1
Q ss_pred eecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC--
Q 035610 23 FWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-- 100 (144)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-- 100 (144)
.+.++.++|||.|+|+..+.|++|||||+++.|+||+++. +..+.|.|+|.++.. ...++ ..++++|.|.++
T Consensus 209 ~f~~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~----~~~p~G~I~L~~~~v-~~~~~-~~~~~~F~I~~~~~ 282 (347)
T 2r09_A 209 TFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSI-REVED-PRKPNCFELYNPSH 282 (347)
T ss_dssp CCCCCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTT----CSSCSEEEECTTCEE-EEECC-SSCSSEEEEECSSS
T ss_pred cccccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCC----ccCCcEEEEcCCeEE-EEccC-CCCCCEEEEEeCCc
Confidence 4567899999999998889999999999999999999987 678999999999764 33333 478899999865
Q ss_pred --------------------CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 101 --------------------GYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 101 --------------------~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.+.|+|+|+|.+|+++||.+|+.++..
T Consensus 283 ~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~ 329 (347)
T 2r09_A 283 KGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 329 (347)
T ss_dssp TTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 378999999999999999999998854
No 48
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.83 E-value=8e-20 Score=141.90 Aligned_cols=101 Identities=17% Similarity=0.228 Sum_probs=84.7
Q ss_pred ecCCceEEEEEeeCCCC-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEE---ee-ccccC-C--CCceE
Q 035610 24 WSQPGAIGPANKQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTV---KC-AEDVL-N--KPFAF 95 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v---~~-~~~~~-~--~~~~f 95 (144)
..+++++|||.|+|+.. +.|++|||||+++.|+||+++. +..+.|.|+|..+..+ .. ..... . .+++|
T Consensus 266 ~~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~----d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F 341 (386)
T 3lju_X 266 SRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL----DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGI 341 (386)
T ss_dssp SCCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTT----CSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEE
T ss_pred ccccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCC----CcccceEEEeecceeeeeecccCCccccccCCCcEE
Confidence 34678999999999877 8999999999999999999987 7789999999775432 22 12111 1 26999
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 96 EHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 96 ~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.|.+++++|+|+|+|++|+++||.+|+.++.++
T Consensus 342 ~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~p 374 (386)
T 3lju_X 342 TIVTPDRKFLFACETESDQREWVAAFQKAVDRP 374 (386)
T ss_dssp EEECSSCEEEEEESSHHHHHHHHHHHHHHHHSC
T ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999764
No 49
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.82 E-value=2e-19 Score=119.62 Aligned_cols=101 Identities=15% Similarity=0.109 Sum_probs=70.1
Q ss_pred CCceEEEEEeeCC--CCCCceeEEEEEeC-CeEEEEecCCCCCCCCCcceEEeCCceEEEeec-----------------
Q 035610 26 QPGAIGPANKQGD--YIKTWLRRWFILKQ-GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCA----------------- 85 (144)
Q Consensus 26 ~~~~~G~L~k~~~--~~~~w~~R~fvL~~-~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~----------------- 85 (144)
.|.++|||.|+++ ..+.|++|||||.+ +.|+||++..+. ......+.|+|..+....+.
T Consensus 3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~-~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~ 81 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDY-IHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGS 81 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHH-HHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCC
T ss_pred cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhh-ccccCCCeeeeeeeEEecCCCcccccccccccccccc
Confidence 3579999999943 67899999999996 678888652100 00111234555443221110
Q ss_pred -cccCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 86 -EDVLNKPFAFEHSRGG-YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 86 -~~~~~~~~~f~I~~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.....++++|.|.+++ ++|+|+|+|.+|+++||++|+.++..
T Consensus 82 ~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 82 AGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp CSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 0011467999999887 89999999999999999999998854
No 50
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.82 E-value=7.9e-20 Score=135.44 Aligned_cols=96 Identities=18% Similarity=0.317 Sum_probs=81.2
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCC-------eEEEEecCCCCCCC-----CCcceEEeCCceEEEeeccccCCC
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQG-------EHFWFKDSHNITRG-----STPRGFIPVGTCLTVKCAEDVLNK 91 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~-------~l~y~k~~~~~~~~-----~~~~~~i~L~~~~~v~~~~~~~~~ 91 (144)
..++.++|||.|+ +.|++|||||+++ .|.||+++. + ..+++.|+|..|..|....+ ..+
T Consensus 7 ~~~v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~----~~~~~~~~p~g~I~L~~~~~V~~~~~-~~~ 77 (264)
T 1qqg_A 7 FSDVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEK----KWRHKSSAPKRSIPLESCFNINKRAD-SKN 77 (264)
T ss_dssp --CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHH----HHHTTCSCCSEEEEGGGEEEEEEECC-SSC
T ss_pred CCCccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCc----cccccccCcceEEEeeceEEEEeccC-CCC
Confidence 3456799999999 7999999999998 999999876 4 47999999999887765544 467
Q ss_pred CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 92 PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 92 ~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+++|.|.+++++|+|+|+|.+|+++||.+|+.++...
T Consensus 78 ~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 78 KHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp SSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred CcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999987654
No 51
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.81 E-value=2e-19 Score=133.20 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=81.4
Q ss_pred cCCceEEEEE--------eeCCC----CCCceeEEEEEeCCeEEEEecCCCC--CCCCCcceEEeCCceEEEeeccccCC
Q 035610 25 SQPGAIGPAN--------KQGDY----IKTWLRRWFILKQGEHFWFKDSHNI--TRGSTPRGFIPVGTCLTVKCAEDVLN 90 (144)
Q Consensus 25 ~~~~~~G~L~--------k~~~~----~~~w~~R~fvL~~~~l~y~k~~~~~--~~~~~~~~~i~L~~~~~v~~~~~~~~ 90 (144)
..+.++|||. |+|+. .+.|++|||||+++.|+||+++... ..+..+.+.|+|.++.... ..+...
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~-~~~~~k 87 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQS-VPEHPK 87 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEE-CTTCSS
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEE-CCcCCC
Confidence 3457999999 55655 7899999999999999999985210 0156789999999865543 333346
Q ss_pred CCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 91 KPFAFEHSR-GGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 91 ~~~~f~I~~-~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
++|+|.|.+ +++.|+|+|+|.+++++||.+|+.++...
T Consensus 88 k~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 88 KEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp CSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 789999998 67899999999999999999999988654
No 52
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.81 E-value=4.9e-20 Score=121.64 Aligned_cols=102 Identities=14% Similarity=0.185 Sum_probs=78.3
Q ss_pred cCCceEEEEEeeCC--------CCCCceeEEEEEeCCeEEEEecCCCCCC----CCCcceEEeCCceEEEeeccccCCCC
Q 035610 25 SQPGAIGPANKQGD--------YIKTWLRRWFILKQGEHFWFKDSHNITR----GSTPRGFIPVGTCLTVKCAEDVLNKP 92 (144)
Q Consensus 25 ~~~~~~G~L~k~~~--------~~~~w~~R~fvL~~~~l~y~k~~~~~~~----~~~~~~~i~L~~~~~v~~~~~~~~~~ 92 (144)
..+.++|||.++.. ..+.|++|||||+++.|+||+++.+... ...+.+.|+|.++.. ..+.+...++
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v-~~~~d~~kr~ 84 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAI-EIASDYTKKK 84 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCC-EECCSSSSST
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEE-EeCCCCCCCC
Confidence 45679999988742 4579999999999999999999861100 001236788888533 3344435788
Q ss_pred ceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 93 FAFEHSR-GGYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 93 ~~f~I~~-~~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
|+|.|.+ +.+.|+|+|+|.+++++||.+|+.++..
T Consensus 85 ~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 85 HVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp TEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred eEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 9999996 5689999999999999999999999854
No 53
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=115.42 Aligned_cols=102 Identities=22% Similarity=0.289 Sum_probs=77.1
Q ss_pred cCCceEEEEEee-----CC--CCCCceeEEEEEeCCeEEEEecCCCCCCC--------CCcceEEeCCceEEEeeccccC
Q 035610 25 SQPGAIGPANKQ-----GD--YIKTWLRRWFILKQGEHFWFKDSHNITRG--------STPRGFIPVGTCLTVKCAEDVL 89 (144)
Q Consensus 25 ~~~~~~G~L~k~-----~~--~~~~w~~R~fvL~~~~l~y~k~~~~~~~~--------~~~~~~i~L~~~~~v~~~~~~~ 89 (144)
.+..++|||.++ |. ..+.|++|||||+++.|+||+++.+.... ..+.+.|+|.+|.......+..
T Consensus 6 ~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~~ 85 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKS 85 (124)
T ss_dssp ---CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGGC
T ss_pred CcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccccC
Confidence 356799999887 22 33599999999999999999987521110 1467999999965433222435
Q ss_pred CCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 90 NKPFAFEHSRG-GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 90 ~~~~~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
.++|+|.|.++ ++.|+|+|++.+++++||.+|+.||.
T Consensus 86 krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 86 SRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred CCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 78899999975 46999999999999999999999984
No 54
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.80 E-value=3.3e-18 Score=113.35 Aligned_cols=102 Identities=15% Similarity=0.228 Sum_probs=78.8
Q ss_pred ceEEEEEe-----eCCC--CCCceeEEEEEeCCeEEEEecCCCCC-----CCCCcceEEeCCceEEEeeccccCCCCceE
Q 035610 28 GAIGPANK-----QGDY--IKTWLRRWFILKQGEHFWFKDSHNIT-----RGSTPRGFIPVGTCLTVKCAEDVLNKPFAF 95 (144)
Q Consensus 28 ~~~G~L~k-----~~~~--~~~w~~R~fvL~~~~l~y~k~~~~~~-----~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f 95 (144)
.++|+|.+ .|+. .++|++|||+|.++.|+||+...... -+..|.+.|+|.++... ..++ ..++|+|
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~-~~e~-~~~~~~F 79 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQ-LPDD-PEHPDIF 79 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEE-CCCC-TTSTTEE
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEE-ecCC-CCCCCEE
Confidence 46777764 3653 58999999999999999999762000 02478999999996554 4443 4689999
Q ss_pred EEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhcCCC
Q 035610 96 EHSRG--GYTMYSVADTEKEKGERINSIGRAIVQHSRS 131 (144)
Q Consensus 96 ~I~~~--~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~ 131 (144)
+|.++ +..|.|+|+|+.++++|+.+|..|+......
T Consensus 80 ~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~~~ 117 (126)
T 2dtc_A 80 QLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSRPQ 117 (126)
T ss_dssp EEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCCC-
T ss_pred EEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCCCC
Confidence 99965 6789999999999999999999999755433
No 55
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.78 E-value=1.3e-18 Score=134.97 Aligned_cols=97 Identities=14% Similarity=0.228 Sum_probs=78.9
Q ss_pred cCCceEEEEEeeCCC--C-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC
Q 035610 25 SQPGAIGPANKQGDY--I-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG 101 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~--~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~ 101 (144)
..+.++|||.|+++. . +.|++|||+|+++.|+||++. +..+.+.|+|.+|... ..++ ..+++||.|.+++
T Consensus 276 ~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~~-----~~~~~~~i~l~~~~v~-~~~~-~~r~~~F~i~t~~ 348 (385)
T 2q13_A 276 NLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARG-----DVAGGLAMDIDNCSVM-AVDC-EDRRYCFQITSFD 348 (385)
T ss_dssp CCSCCEEEEEEC--------CCEEEEEEEETTEEEEECSS-----CSSCEEEEECTTCEEE-EECC-TTCSSEEEEECTT
T ss_pred CCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecCC-----CcCCCceEEccceEEE-eccc-cCCCceEEEEeCC
Confidence 366899999999754 3 379999999999999999984 3567899999997654 3333 3788999999998
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 102 --YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 102 --~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
++|+|+|+|.+++++||.+|+.++...
T Consensus 349 ~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~ 377 (385)
T 2q13_A 349 GKKSSILQAESKKDHEEWICTINNISKQI 377 (385)
T ss_dssp SCBCCCEECSSHHHHHHHHHHHHHHHTTC
T ss_pred CCeEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999999988544
No 56
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.78 E-value=1e-18 Score=135.71 Aligned_cols=96 Identities=16% Similarity=0.233 Sum_probs=79.4
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEE--eCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEE----e
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFIL--KQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS----R 99 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL--~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~----~ 99 (144)
...++|||.|+|+..+.|++||||| .++.|.||+++. +..|.|.|.|..+..+.. .+..+++++|.|. +
T Consensus 145 ~~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~----~~~p~g~I~L~~~~~~~~-~~~~~~~~~f~I~~~~~~ 219 (386)
T 3lju_X 145 AGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRND----AKEPKAVMKIEHLNATFQ-PAKIGHPHGLQVTYLKDN 219 (386)
T ss_dssp SSEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC---------CCSEEEEGGGEEEEEC-HHHHTSTTCEEEEEEETT
T ss_pred ccccccceeeeccccCCceEEEEEEEcCCCEEEEECCCC----ccCcccEEEeeccEEEEc-ccccCCCceEEEEEecCC
Confidence 4678999999999999999999999 899999999987 789999999999766543 2234688999998 5
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 100 GGYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+.+.|+++|+|.+++.+|+++|+.+..
T Consensus 220 ~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 220 STRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 678999999999999999999998743
No 57
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.76 E-value=4.5e-18 Score=111.71 Aligned_cols=97 Identities=12% Similarity=0.256 Sum_probs=77.2
Q ss_pred eEEEEEe--eCCCCC-CceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-------cCCCCceEEEE
Q 035610 29 AIGPANK--QGDYIK-TWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------VLNKPFAFEHS 98 (144)
Q Consensus 29 ~~G~L~k--~~~~~~-~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-------~~~~~~~f~I~ 98 (144)
.+|||.+ +++..+ .|++|||||.++.|+||+.+. ......+.+.|+|+.+..|+.+.. ....++.|+|.
T Consensus 3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~-~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~ 81 (117)
T 2rov_A 3 LEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQ-DKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQIL 81 (117)
T ss_dssp SEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHH-HHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEE
T ss_pred eEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCC-CcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEE
Confidence 6899996 666677 899999999999999999864 100236789999998877655432 12346899998
Q ss_pred eC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 99 RG------GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 99 ~~------~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+. .++++|.|+|.+|+++||.+|+++|.
T Consensus 82 ~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 82 YANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp ECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred eCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 63 58999999999999999999999774
No 58
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.76 E-value=3.6e-18 Score=127.36 Aligned_cols=98 Identities=17% Similarity=0.210 Sum_probs=77.0
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCC---ceEEEeeccc----cCCCCceEEE
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVG---TCLTVKCAED----VLNKPFAFEH 97 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~---~~~~v~~~~~----~~~~~~~f~I 97 (144)
..|.++|||+|+++..+.|++|||||+++.|+||+++. +..+++.|.|. .+........ ...++++|.|
T Consensus 166 ~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~----~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i 241 (291)
T 3tca_A 166 IVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGK----TKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVL 241 (291)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTC----CSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEE
T ss_pred CCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCc----cccccCceeeccceeEEEEecCccccccCCCCCeEEEE
Confidence 36789999999999899999999999999999999887 56666666554 4323222211 2356799999
Q ss_pred EeCC------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 98 SRGG------YTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 98 ~~~~------~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
.+++ +.|+|+|+|.+++..||.||+.|..
T Consensus 242 ~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~ 276 (291)
T 3tca_A 242 KHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAKY 276 (291)
T ss_dssp ECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 9754 4699999999999999999998753
No 59
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.75 E-value=4.9e-18 Score=132.58 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=79.6
Q ss_pred cCCceEEEEEee---CCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC
Q 035610 25 SQPGAIGPANKQ---GDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG 101 (144)
Q Consensus 25 ~~~~~~G~L~k~---~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~ 101 (144)
....++|||.|+ |+..+.|++|||||+++.|+||+... ..+.+.++|..|.. ...+. .++++||.|.+++
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~-----~~~~~~~~l~~~~v-~~~~~-~~r~~cF~i~~~~ 371 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGA-----VAGGLIQDLDNCSV-MAVDC-EDRRYCFQITTPN 371 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTC-----SSCCCCBCSSCCEE-EEECC-TTCSSEEEEECTT
T ss_pred CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCC-----CCCCeEEECCceEE-EECCC-CCCCceEEEEecC
Confidence 356799999998 44567899999999999999998764 55778889999654 44443 3688999999875
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 102 --YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 102 --~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
++|+|+|+|.+|+.+||.+|+.++.+.
T Consensus 372 ~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 372 GKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp SSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred CCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 689999999999999999999988543
No 60
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.74 E-value=5.2e-17 Score=109.85 Aligned_cols=99 Identities=17% Similarity=0.265 Sum_probs=79.6
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCC---------CCC----C-----------------CC---------
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSH---------NIT----R-----------------GS--------- 68 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~---------~~~----~-----------------~~--------- 68 (144)
.|+|||.+++...+.|.+|||||.++.|+|++... +.. + ..
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E 81 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE 81 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence 58999999999999999999999999999988111 000 0 00
Q ss_pred ------CcceEEeCCceEEEeeccccCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 69 ------TPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG---GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 69 ------~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~---~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
-.+|+|+|.+|..........+++++|.|.++ .+.|.++|+|.+++.+||.+|++|+-
T Consensus 82 ~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 82 NSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp TTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 11799999998887655544578899999976 45899999999999999999999873
No 61
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.5e-16 Score=103.98 Aligned_cols=104 Identities=18% Similarity=0.099 Sum_probs=84.5
Q ss_pred ecCCceEEEEEeeC--CCCCCceeEEEEEeC------CeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc---CCCC
Q 035610 24 WSQPGAIGPANKQG--DYIKTWLRRWFILKQ------GEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV---LNKP 92 (144)
Q Consensus 24 ~~~~~~~G~L~k~~--~~~~~w~~R~fvL~~------~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~---~~~~ 92 (144)
..++++.|||.++. .+.+.|++|||+|.. ..|-||..+....+...++.+|.|+.|..|.++... ....
T Consensus 9 ~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~ 88 (127)
T 2d9w_A 9 GDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDT 88 (127)
T ss_dssp CCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSC
T ss_pred cCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcc
Confidence 34688999999985 567789999999985 348899987633334578999999999999877543 2455
Q ss_pred ceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 93 FAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 93 ~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+.|.|.|+++.|+|+|++. ++.+||.+|.+.....
T Consensus 89 ~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~aF~~ 123 (127)
T 2d9w_A 89 SAFFLETKERLYLLAAPAA-ERGDWVQAICLLAFSG 123 (127)
T ss_dssp EEEEEEESSCEEEEEECHH-HHHHHHHHHHHHHTSS
T ss_pred eEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHhcCC
Confidence 8999999999999999965 8999999999977544
No 62
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=5.2e-17 Score=108.04 Aligned_cols=97 Identities=13% Similarity=0.186 Sum_probs=78.4
Q ss_pred cCCceEEEEEeeC---CCCCCceeEEEEEeCCeEEEEecCCCCCCCC--CcceEEeCCceEEEeeccccCCCCceEEEEe
Q 035610 25 SQPGAIGPANKQG---DYIKTWLRRWFILKQGEHFWFKDSHNITRGS--TPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR 99 (144)
Q Consensus 25 ~~~~~~G~L~k~~---~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~--~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~ 99 (144)
.-|...+||...+ ...+.|++|||+|+++.|+||+++. +. .|.+.|+|.+|... +.......+++|.+..
T Consensus 7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~ke----e~~~ePig~I~L~gceV~-pd~~~~~~kf~ikl~i 81 (137)
T 2ys3_A 7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQD----EAPGDPIQQLNLKGCEVV-PDVNVSGQKFCIKLLV 81 (137)
T ss_dssp SCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTT----TTTSCCSCCBCTTTCEEE-ECCBGGGTBEEEEEEE
T ss_pred CCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCch----hccCCCceEEECCCCEEe-ccccccCCceEEEEEc
Confidence 3577889998875 3567899999999999999999886 43 89999999998744 3332235668877775
Q ss_pred CC----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 100 GG----YTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 100 ~~----~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
+. ++|+|.|+|++++.+||+|++.|-.
T Consensus 82 Ps~~g~r~y~l~cdsEeqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 82 PSPEGMSEIYLRCQDEQQYARWMAGCRLASK 112 (137)
T ss_dssp ECSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cCCCCceEEEEECCCHHHHHHHHHHHHHhcc
Confidence 43 8999999999999999999998763
No 63
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.57 E-value=3.4e-15 Score=117.08 Aligned_cols=97 Identities=23% Similarity=0.289 Sum_probs=71.3
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEe-CCeEEEEecCCCCCCCCCcceEEeCCceEEEe--eccccCCCCceEEEEeCC-
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILK-QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVK--CAEDVLNKPFAFEHSRGG- 101 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~-~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~--~~~~~~~~~~~f~I~~~~- 101 (144)
..+++|||.|+|+..+.|++|||+|+ ++.|.||+++. ...+.+.|+|..+..+. .......++++|.|...+
T Consensus 5 ~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~ 80 (446)
T 4ejn_A 5 AIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERP----QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW 80 (446)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-----------CCCGGGBCTTCEEEEECSSSTTEEEEEEEET
T ss_pred eEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCC----CCCccCcccccCccccceeecCCCCCCCceeEEEcCCC
Confidence 46799999999999999999999997 89999999987 67778888888843321 111123567999998543
Q ss_pred eEE---EEEcCCHHHHHHHHHHHHHHHH
Q 035610 102 YTM---YSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 102 ~~~---~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
..+ .+.+++.+++++|+.+|+.++.
T Consensus 81 ~~~~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 81 TTVIERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred ceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence 222 6889999999999999999864
No 64
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.57 E-value=5.9e-14 Score=103.19 Aligned_cols=99 Identities=10% Similarity=0.093 Sum_probs=77.0
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceE---EeCCceEEEeeccc----cCCCCceEEE
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGF---IPVGTCLTVKCAED----VLNKPFAFEH 97 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~---i~L~~~~~v~~~~~----~~~~~~~f~I 97 (144)
.-|..+|||++++...++|++|||+|+++.|+|++... ...++.. +.|++......... ....++||.|
T Consensus 130 ~~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~----sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~i 205 (256)
T 3hk0_A 130 SSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGT----SAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCI 205 (256)
T ss_dssp SCEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTT----CCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEE
T ss_pred CCCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCC----CCccccceEEEEcCCCEEEEecccccccCCCCCCEEEE
Confidence 45678999999988889999999999999999888664 4445544 68998555443321 1244699999
Q ss_pred EeCCe------EEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 98 SRGGY------TMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 98 ~~~~~------~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
..... .++|+|++++++..|+.+|+.|...
T Consensus 206 k~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g 241 (256)
T 3hk0_A 206 KPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYG 241 (256)
T ss_dssp EETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred EcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 95532 5999999999999999999998643
No 65
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.54 E-value=1.9e-14 Score=106.92 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=76.7
Q ss_pred cCCceEEEEEee-----C-------CCCCCceeEEEEEeCCeEEEEecCCCCC--CCCCcceEEeCCceEEEeeccccCC
Q 035610 25 SQPGAIGPANKQ-----G-------DYIKTWLRRWFILKQGEHFWFKDSHNIT--RGSTPRGFIPVGTCLTVKCAEDVLN 90 (144)
Q Consensus 25 ~~~~~~G~L~k~-----~-------~~~~~w~~R~fvL~~~~l~y~k~~~~~~--~~~~~~~~i~L~~~~~v~~~~~~~~ 90 (144)
..+.++|||.++ + ...+.|+++||||+++.|+||+++.... ....+.+.|.|.++...... +...
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~-d~~k 87 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVP-EHPK 87 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCT-TSSS
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEecc-ccCC
Confidence 346699999753 1 1357999999999999999999875211 12356788999997665333 3346
Q ss_pred CCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 91 KPFAFEHSRG-GYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 91 ~~~~f~I~~~-~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
++|+|.|.++ ++.|+|+|++.+|+++||.+|+.++..
T Consensus 88 Kk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~ 125 (279)
T 3a8n_A 88 KDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAA 125 (279)
T ss_dssp SCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 7899999865 578999999999999999999998753
No 66
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.54 E-value=2.6e-13 Score=92.52 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=79.1
Q ss_pred CCceEEEEEeeC---CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe---
Q 035610 26 QPGAIGPANKQG---DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR--- 99 (144)
Q Consensus 26 ~~~~~G~L~k~~---~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~--- 99 (144)
-|...+||.... -..+.|++|||+++++.|+|||++.+. ...|.+.|.|.||..+..+.- ...++++.+.-
T Consensus 46 iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~--~geP~~~I~LrGCEVtpDVnv-a~~Kf~IkL~vP~~ 122 (173)
T 4f7h_A 46 IPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEES--SGTPAHQMNLRGCEVTPDVNI-SGQKFNIKLLIPVA 122 (173)
T ss_dssp TTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGC--SSCCSEEEECTTCEEEEEEET-TTTEEEEEEEEEET
T ss_pred ChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHh--cCCCceEEecCceEEeccccc-cccceeEEEeccCC
Confidence 567889997754 356899999999999999999998721 267999999999876533322 24556666553
Q ss_pred -CCeEEEEEcCCHHHHHHHHHHHHHHHHhcCCCCCc
Q 035610 100 -GGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTE 134 (144)
Q Consensus 100 -~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~~~~ 134 (144)
+...+++.|+++.++.+||.|++-|.. ++++.|
T Consensus 123 ~gm~e~~Lrcd~E~qya~WMAAcrLAsk--GktmAd 156 (173)
T 4f7h_A 123 EGMNEIWLRCDNEKQYAHWMAACRLASK--GKTMAD 156 (173)
T ss_dssp TEEEEEEEEESSHHHHHHHHHHHHHHHT--TCCTTS
T ss_pred CCcceeeeecCCHHHHHHHHHHhhhhcc--CCcccc
Confidence 346899999999999999999999774 445544
No 67
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.51 E-value=5.5e-13 Score=90.04 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=76.8
Q ss_pred cCCceEEEEEeeC---CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe--
Q 035610 25 SQPGAIGPANKQG---DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR-- 99 (144)
Q Consensus 25 ~~~~~~G~L~k~~---~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~-- 99 (144)
.-|...+||.... -..+.|++|||++++..|.|||++.+. ...|.+.|+|.+|..+..+. ....+++|.+.-
T Consensus 24 ~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~--~geP~~~inLrGCEVtPDVn-va~~Kf~ikL~ip~ 100 (165)
T 4bbk_A 24 DIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELE--QGEPIEKLNLRGCEIVPDVN-VSGRKFGIKLLIPV 100 (165)
T ss_dssp --CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGT--TSCCSEEEECTTCEEEEEEE-TTTTEEEEEEEEEE
T ss_pred cChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHh--cCCCceEEecCccEEecccc-cccceeeEEEecCC
Confidence 3567889997754 356899999999999999999998722 36899999999987653222 125567777753
Q ss_pred C--CeEEEEEcCCHHHHHHHHHHHHHHHHhcCCCCCc
Q 035610 100 G--GYTMYSVADTEKEKGERINSIGRAIVQHSRSVTE 134 (144)
Q Consensus 100 ~--~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~~~~ 134 (144)
+ ...++|.|+++.+..+||.|++-|.. ++++.|
T Consensus 101 ~~gm~e~~LrcdsE~QYa~WMAAcrLAsk--GkTmAD 135 (165)
T 4bbk_A 101 ADGMNEVYLRCDHEDQYARWMAACILASK--GKTMAD 135 (165)
T ss_dssp TTEEEEEEEEESSHHHHHHHHHHHHHHHT--TCCTTS
T ss_pred CCcceeeeeecCCHHHHHHHHHHhhhccc--ccchhh
Confidence 2 35889999999999999999999774 445554
No 68
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.50 E-value=1.9e-13 Score=101.61 Aligned_cols=98 Identities=15% Similarity=0.246 Sum_probs=72.6
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCc---ceEEeCCceEEEeeccc----cCCCCceEEE
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTP---RGFIPVGTCLTVKCAED----VLNKPFAFEH 97 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~---~~~i~L~~~~~v~~~~~----~~~~~~~f~I 97 (144)
..|..+|||++++...++|++|||+|+++.|+|+.... ...+ .+.+.|+++........ ....++||.|
T Consensus 156 ~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~----sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~i 231 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGK----AKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVL 231 (281)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC-------------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEE
T ss_pred CCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCC----CCccccceEEEEcCCcEEEEecccccccCCCCCcEEEE
Confidence 46779999999988889999999999999999888654 2334 45668888655433211 1345799999
Q ss_pred EeC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 98 SRG------GYTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 98 ~~~------~~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
..+ ...++|+|++++++..|+.+|+.|..
T Consensus 232 k~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 232 KHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp ECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 953 34799999999999999999999764
No 69
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.49 E-value=6.4e-13 Score=86.73 Aligned_cols=100 Identities=18% Similarity=0.123 Sum_probs=84.9
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-----CCCCceEEEE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-----LNKPFAFEHS 98 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-----~~~~~~f~I~ 98 (144)
...++++||+-+.+..-+.|+|+|++|...+|.+|+++. .......|+|..+..|...... ...+|||+|.
T Consensus 5 ~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~----~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~ 80 (125)
T 2coa_A 5 SSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNT----TNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIV 80 (125)
T ss_dssp CCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSS----CSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEE
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecCC----CCceeeeeehhHeecccccccccccCCCCCCceEEEE
Confidence 456789999999998888999999999999999999988 7889999999999888876432 2356999999
Q ss_pred eCCeEEEEEcC---C--------HHHHHHHHHHHHHHHHh
Q 035610 99 RGGYTMYSVAD---T--------EKEKGERINSIGRAIVQ 127 (144)
Q Consensus 99 ~~~~~~~l~a~---s--------~~e~~~Wi~al~~ai~~ 127 (144)
+.+..||+.++ . .+.+..|..||++|+-.
T Consensus 81 T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALmP 120 (125)
T 2coa_A 81 TANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMS 120 (125)
T ss_dssp CSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGGG
T ss_pred eCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhccC
Confidence 99999998763 1 25699999999998843
No 70
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.47 E-value=4.7e-13 Score=90.44 Aligned_cols=91 Identities=20% Similarity=0.240 Sum_probs=75.5
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEE
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMY 105 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~ 105 (144)
..++.|+|.|+.+.. |++|||+|+++...||-++. ....+|.|+++.+..|.... ...|.|.+++++|+
T Consensus 51 ~Ilk~G~v~KrkGl~--~kkR~liLT~~PrL~Yvdp~----~~~~KGeIpls~~l~ve~k~-----~~~F~I~Tp~RtY~ 119 (151)
T 1w1g_A 51 LILKMGPVDKRKGLF--ARRRQLLLTEGPHLYYVDPV----NKVLKGEIPWSQELRPEAKN-----FKTFFVHTPNRTYY 119 (151)
T ss_dssp CEEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETT----TTEEEEEECCCTTCEEEESS-----SSEEEEEETTEEEE
T ss_pred cEEEEEEEEecccCc--ceeEEEEEcCCceEEEEcCc----cccccceEecCCCeeEEEcC-----CCEEEEECCCceEE
Confidence 446899999965543 99999999998888888876 67889999999876664433 24799999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhc
Q 035610 106 SVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 106 l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|.+. ...+++|+++|+.++...
T Consensus 120 ~~d~-~~~AqeWv~aI~~~~~~~ 141 (151)
T 1w1g_A 120 LMDP-SGNAHKWCRKIQEVWRQR 141 (151)
T ss_dssp EECT-TSCHHHHHHHHHHHHHHH
T ss_pred EEcC-ccCHHHHHHHHHHHHHHH
Confidence 9886 888999999999988653
No 71
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=5.1e-12 Score=82.72 Aligned_cols=101 Identities=16% Similarity=0.113 Sum_probs=85.2
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc-----CCCCceEEEE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV-----LNKPFAFEHS 98 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~-----~~~~~~f~I~ 98 (144)
....+++||+-..+..-..|+|+|++|...+|.+|.++. .......|+|..+..|...... ...+|||+|.
T Consensus 5 ~s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~----~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~ 80 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNES----GSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEII 80 (129)
T ss_dssp CTTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSS----CCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEE
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecCC----CCceeceeeHHHhcccccccCccccCCCCCCceEEEE
Confidence 346779999999987778999999999999999999987 7888899999999888776432 2345999999
Q ss_pred eCCeEEEEEcCC---------------HHHHHHHHHHHHHHHHhc
Q 035610 99 RGGYTMYSVADT---------------EKEKGERINSIGRAIVQH 128 (144)
Q Consensus 99 ~~~~~~~l~a~s---------------~~e~~~Wi~al~~ai~~~ 128 (144)
+.+..||+.++. .+.+..|..||++|+-..
T Consensus 81 T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP~ 125 (129)
T 2d9z_A 81 TDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMSG 125 (129)
T ss_dssp CSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHHS
T ss_pred ECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccCC
Confidence 999999987632 689999999999998544
No 72
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.11 E-value=1.6e-09 Score=72.07 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=79.4
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC-e
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG-Y 102 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~-~ 102 (144)
..+....|-+..+.+..+.-+.|||+|-++.|.|.+... .......+|.++|.+ ..|...++..+.+|+|.|..+. +
T Consensus 25 lG~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~-~~~~f~~kgklPL~g-~~V~~~ed~~~~~~aFeI~g~~~~ 102 (132)
T 1v61_A 25 LGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASP-RMSGFMYQGKIPIAG-MVVNRLDEIEGSDCMFEITGSTVE 102 (132)
T ss_dssp TCCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSS-SSSCCEEEEEECTTT-CBCSTTCSSSSSCCCEEEECSSSC
T ss_pred cCCeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecC-CCceEEEEEEEecce-eEEEeccccccCccEEEEecCCCc
Confidence 335556666666654445568899999999999988654 112445679999999 4555555545788999999775 8
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 103 TMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 103 ~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
.+.++|.|.+|+++|+.+|+.++..+.
T Consensus 103 ~i~v~~~s~eE~~~Wl~~L~~~i~~~~ 129 (132)
T 1v61_A 103 RIVVHCNNNQDFQEWMEQLNRLTKSGP 129 (132)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHHTTSC
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 899999999999999999999986554
No 73
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.91 E-value=7.5e-08 Score=62.35 Aligned_cols=100 Identities=11% Similarity=-0.133 Sum_probs=72.1
Q ss_pred CceEEEEEeeCCCC-CCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEE
Q 035610 27 PGAIGPANKQGDYI-KTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMY 105 (144)
Q Consensus 27 ~~~~G~L~k~~~~~-~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~ 105 (144)
.+++|-|.+..... +.=++++|+|-++.|.|-+..............++|.+...+ ...+....+|+|.|.+..+++.
T Consensus 8 lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~-d~~d~~~~~n~f~i~~~~~s~~ 86 (113)
T 1zc3_B 8 LVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVV-NVKDNPPMKDMFKLLMFPESRI 86 (113)
T ss_dssp EEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEE-EECCBTTBSSEEEEEETTEEEE
T ss_pred EEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEE-ECCCCcccceEEEEEeCCceEE
Confidence 34789888765322 233567999999999987764300001234456788884443 3444346789999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHh
Q 035610 106 SVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 106 l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
++|+|..++.+|+.+|++|+..
T Consensus 87 ~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 87 FQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EECSSHHHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999854
No 74
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.88 E-value=8.1e-08 Score=63.06 Aligned_cols=100 Identities=13% Similarity=0.102 Sum_probs=78.6
Q ss_pred cCCceEEEEEeeC--------CCCCCceeEEEEEeC----C-e-EEEEecCCCCCCCCCcceEEeCCceEEEeeccc--c
Q 035610 25 SQPGAIGPANKQG--------DYIKTWLRRWFILKQ----G-E-HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--V 88 (144)
Q Consensus 25 ~~~~~~G~L~k~~--------~~~~~w~~R~fvL~~----~-~-l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~--~ 88 (144)
.+..+||.|.-.. +....|++++++|.. + . |-||.++. ..+|+..|++..|..|+.... .
T Consensus 16 ~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPk----ssKpK~~i~cs~I~EVR~tt~LEm 91 (136)
T 1v5m_A 16 VDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPK----ASRPKVSIPLSAIIEVRTTMPLEM 91 (136)
T ss_dssp CSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTT----SSSCSSCEETTTCCBCCCCCCSSS
T ss_pred ceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCc----ccCCccccchhhhhhhhhcccccc
Confidence 3667899986642 244689999999873 2 3 55888877 788999999999877765533 2
Q ss_pred CCCCceEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 89 LNKPFAFEHSRGGY-TMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 89 ~~~~~~f~I~~~~~-~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.++.|.|.|...++ .|+|.|.+..++++|+..|+.++...
T Consensus 92 PD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~g 132 (136)
T 1v5m_A 92 PEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDSG 132 (136)
T ss_dssp CCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHHS
T ss_pred CCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCCC
Confidence 46779999998766 89999999999999999999998653
No 75
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=98.74 E-value=9.1e-08 Score=68.19 Aligned_cols=99 Identities=14% Similarity=0.163 Sum_probs=77.7
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeC-----C--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEE
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQ-----G--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEH 97 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~-----~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I 97 (144)
.....||++..+.+ ++|+.||+||+. + .|..|+++.+..+...++.++.|..+..++..-.-.++.|++.|
T Consensus 7 ~~~v~eg~vk~r~~--KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAI 84 (224)
T 3ml4_A 7 EAALVEGQVKLRDG--KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALPYEGLAHTLAI 84 (224)
T ss_dssp CCCSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEEETTEEEEEEE
T ss_pred cceeEEEeeeeecC--CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCccccccccCcccEEEE
Confidence 35678999988763 599999999984 3 36689876522234677899999998888766553467799999
Q ss_pred EeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 98 SRGGYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 98 ~~~~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
+..+....|++++.+.+..|-..|+..+
T Consensus 85 Ic~d~~~vLAFds~e~l~~W~~~l~~sl 112 (224)
T 3ml4_A 85 ICLSQAVMLGFDSHEAMCAWDTRIRYAL 112 (224)
T ss_dssp EESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred EecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence 9999999999999999999999998744
No 76
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=98.64 E-value=1.1e-06 Score=58.66 Aligned_cols=84 Identities=11% Similarity=-0.014 Sum_probs=64.7
Q ss_pred CceeEEEEEeCCeEEEEecCCC--CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC------eEEEEEcCCHHH
Q 035610 42 TWLRRWFILKQGEHFWFKDSHN--ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG------YTMYSVADTEKE 113 (144)
Q Consensus 42 ~w~~R~fvL~~~~l~y~k~~~~--~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~------~~~~l~a~s~~e 113 (144)
.-+.|+|.|-++.|.|-+.-.. .......+..++|.+ ..|...++. ..+|+|.|.... ..+.|.|.|..|
T Consensus 32 g~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~g-m~V~~~e~e-~~p~~~~l~s~~~G~~~k~~i~~~A~s~~E 109 (140)
T 3qwm_A 32 GLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYG-MQVLLFENQ-YYPNGIRLTSSVPGADIKVLINFNAPNPQD 109 (140)
T ss_dssp TTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTT-EEEEEECCS-SCTTEEEEEECCTTSCCEEEEEEECSSHHH
T ss_pred cccceEEEEecchhhheeecccCCCCCceEEEEEeeecc-eEEEcccCC-CCceEEEEEecCCCCcceEEEEEECCCHHH
Confidence 4689999999999999862210 122456788999999 555444443 589999999653 568899999999
Q ss_pred HHHHHHHHHHHHHh
Q 035610 114 KGERINSIGRAIVQ 127 (144)
Q Consensus 114 ~~~Wi~al~~ai~~ 127 (144)
+.+|+++|+.+|..
T Consensus 110 R~rwi~dL~esI~e 123 (140)
T 3qwm_A 110 RKKFTDDLRESIAE 123 (140)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 77
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.54 E-value=2.2e-07 Score=67.02 Aligned_cols=39 Identities=26% Similarity=0.618 Sum_probs=34.3
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCC
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSH 62 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~ 62 (144)
...|-.+|||.|+|+..+.|++|||||+++.+.||+...
T Consensus 18 ~~~~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~~ 56 (228)
T 3tfm_A 18 PGSPYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQ 56 (228)
T ss_dssp ---CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSCC
T ss_pred CCCCceEEEEeecCcccccceEEEEEEeCCEEEEeccCC
Confidence 447789999999999999999999999999999999876
No 78
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=98.33 E-value=3e-06 Score=66.18 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=67.8
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEE
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSV 107 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~ 107 (144)
+++|.|.+..+ +..+.||++|-++.|.+.+... ......+..|+|.++ .+....+ ...+++|.|.++.+.|.|.
T Consensus 245 i~~g~l~~~~~--~~~~~r~~fLF~d~Ll~~k~~~--~~~y~~k~~i~L~~l-~v~~~~~-~~~~~~f~i~~~~~~~~l~ 318 (434)
T 3mpx_A 245 LKEGTLMKVTG--KNRRPRHLFLMNDVLLYTYPQK--DGKYRLKNTLAVANM-KVSRPVM-EKVPYALKIETSESCLMLS 318 (434)
T ss_dssp EECCEEEEEET--TEEEEEEEEEESSEEEEEEECT--TSCEEEEEEEEC------CCCCC-TTSCSEEEEECSSCEEEEE
T ss_pred EecceEEEEeC--CCceEEEEEEECCEEEEEEecC--CCeEEEEEEEEcCCc-EEEecCC-CCCCeeEEEecCCeEEEEe
Confidence 47888877653 3578899999999999988653 112345678888884 3333322 2568999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhc
Q 035610 108 ADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 108 a~s~~e~~~Wi~al~~ai~~~ 128 (144)
|.|.++++.|+++|++++...
T Consensus 319 a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 319 ASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp CSSHHHHHHHHHHHHHC----
T ss_pred cCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998653
No 79
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.32 E-value=1.4e-05 Score=52.80 Aligned_cols=83 Identities=11% Similarity=0.190 Sum_probs=59.9
Q ss_pred eeEEEEEeCCe-EEEEecCCCCCCCCCcceEEeCCceEEEeeccc---------cCCCCceEEEEeCC--eEEEEEcCCH
Q 035610 44 LRRWFILKQGE-HFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---------VLNKPFAFEHSRGG--YTMYSVADTE 111 (144)
Q Consensus 44 ~~R~fvL~~~~-l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~---------~~~~~~~f~I~~~~--~~~~l~a~s~ 111 (144)
+.|||.|..+. +.|+.+.. .......+.|+|+.+..|..... ......+|+|...+ +++.|.|+|.
T Consensus 29 k~r~f~l~~~~~~~w~~s~~--~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~ 106 (131)
T 1mai_A 29 RERFYKLQEDCKTIWQESRK--VMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSP 106 (131)
T ss_dssp EEEEEEECTTSSEEEECCCC--TTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSH
T ss_pred eeEEEEECCCCCEEEeCCcC--CCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCH
Confidence 67899998754 44553221 11234678999999888877641 12345899999776 6899999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 035610 112 KEKGERINSIGRAIVQH 128 (144)
Q Consensus 112 ~e~~~Wi~al~~ai~~~ 128 (144)
++++.|+.+|+..+...
T Consensus 107 ~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 107 ADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp HHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999876443
No 80
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=98.32 E-value=6.9e-06 Score=62.48 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=71.6
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC---C----CCCCCcceEEeCCceEEEeeccccCCCCceEEEE
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN---I----TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHS 98 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~---~----~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~ 98 (144)
.-.++|.|.+.| ..+.|+++|-++.|.+.+.... . ......++.|+|..+. |....+....+++|.|.
T Consensus 246 ~li~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~-v~~~~d~~~~~~~F~i~ 320 (354)
T 1dbh_A 246 EFIMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQ-INDKDDTNEYKHAFEII 320 (354)
T ss_dssp CEEEEEEEEETT----CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCE-EEECCCSSSCCSEEEEC
T ss_pred eEEEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceE-EEeCCcccccCccEEEe
Confidence 345788888874 5788999999999998887520 0 0012235788999854 44443323567999999
Q ss_pred eCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 99 RGG-YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 99 ~~~-~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
..+ ..|.|.|.|.++++.|+++|+.+..+
T Consensus 321 ~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~ 350 (354)
T 1dbh_A 321 LKDENSVIFSAKSAEEKNNWMAALISLQYR 350 (354)
T ss_dssp CTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 774 78999999999999999999998743
No 81
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=98.28 E-value=2.2e-05 Score=61.86 Aligned_cols=104 Identities=17% Similarity=0.088 Sum_probs=74.7
Q ss_pred ecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEE
Q 035610 24 WSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEH 97 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I 97 (144)
....+++|.|.+.....+..+.|+|+|-++.|.+.+...........++.|+|..+... ...+. ...+++|.|
T Consensus 331 ~r~li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~-~~~d~~~~~~~~~~~~~F~i 409 (466)
T 2pz1_A 331 SSELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVV-DLEDGKDRDLHVSIKNAFRL 409 (466)
T ss_dssp CSCEEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEE-ECCSBSCCSSCCCBCEEEEE
T ss_pred cceeEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEE-eCCCCcccccccccceeEEE
Confidence 34556899998876434567899999999999998865300112234678899885443 33221 134589999
Q ss_pred EeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 98 SRG--GYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 98 ~~~--~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
... ...|.|+|.|.+++..|+++|+.++.+.
T Consensus 410 ~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~ 442 (466)
T 2pz1_A 410 HRGATGDSHLLCTRKPEQKQRWLKAFAREREQV 442 (466)
T ss_dssp ECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 965 5689999999999999999999988753
No 82
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=98.27 E-value=2.8e-05 Score=60.28 Aligned_cols=102 Identities=16% Similarity=-0.042 Sum_probs=72.9
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEEE
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEHS 98 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I~ 98 (144)
...+++|.|.+.....+..+.|+|+|-++.|.+.+...........++.|+|..+. |....+. ...+++|.|.
T Consensus 255 r~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~-v~~~~d~~~~~~~~~~~~~F~i~ 333 (402)
T 2dfk_A 255 SELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYE-VIDIEDGRDDDFNVSMKNAFKLH 333 (402)
T ss_dssp CCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEE-EEECCSEECSSSCCEESSEEEEE
T ss_pred cceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceE-EEecCCCCccccccccceeEEEE
Confidence 34557899987764345678999999999999988653001122346788998844 3333221 1235899999
Q ss_pred eC--CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 99 RG--GYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 99 ~~--~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.. ...|.|+|.|.+++..|+++|+.++..
T Consensus 334 ~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~ 364 (402)
T 2dfk_A 334 NKETEEVHLFFAKKLEEKIRWLRAFREERKM 364 (402)
T ss_dssp ESSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ECCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 65 468999999999999999999997765
No 83
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.19 E-value=3.3e-05 Score=59.83 Aligned_cols=102 Identities=11% Similarity=0.003 Sum_probs=73.6
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc---CCCCceEEEEe--
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV---LNKPFAFEHSR-- 99 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~---~~~~~~f~I~~-- 99 (144)
.+..++|.|.......+..+.|+++|-++.|.+.+... .....+..|+|..+......+.. ...+++|.|..
T Consensus 232 grli~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~---~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~ 308 (406)
T 2vrw_B 232 GRPKIDGELKITSVERRSKTDRYAFLLDKALLICKRRG---DSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQ 308 (406)
T ss_dssp CSEEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEET---TEEEEEEEEETTTEEEEC--------CTTCEEEEEEETT
T ss_pred CcccccccEEEEecCCCccceEEEEecCCEEEEEEecC---CceEEEEEecccceeeeecCCCCccCCccceeeEEEecC
Confidence 34568899988754445678999999999999887653 12345678888884433222211 13468999986
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 100 GGYTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+.+.|.|.|.|.++++.|+++|+.++....
T Consensus 309 ~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 309 GAQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp CSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 467899999999999999999999987654
No 84
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.14 E-value=2.5e-05 Score=63.35 Aligned_cols=102 Identities=11% Similarity=0.020 Sum_probs=75.7
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc---cCCCCceEEEEeCC
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---VLNKPFAFEHSRGG 101 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~---~~~~~~~f~I~~~~ 101 (144)
.+..++|.|.+.....+..+.|+++|-++.|.+.+... .....+..|+|..+......+. ....+++|.|....
T Consensus 404 grll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~---~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~ 480 (587)
T 3ky9_A 404 GRPKIDGELKITSVERRSKMDRYAFLLDKALLICKRRG---DSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQ 480 (587)
T ss_dssp CCEEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEET---TEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETT
T ss_pred CceEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecC---CEEEeeeeechhhceeeecCCCCcccccccceeEEEEcC
Confidence 44568999988765556789999999999999887653 1345678899998544322221 12356899999765
Q ss_pred --eEEEEEcCCHHHHHHHHHHHHHHHHhcC
Q 035610 102 --YTMYSVADTEKEKGERINSIGRAIVQHS 129 (144)
Q Consensus 102 --~~~~l~a~s~~e~~~Wi~al~~ai~~~~ 129 (144)
+.|.|.|.|.++++.|+++|+.++....
T Consensus 481 ~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 481 GAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp C---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 7899999999999999999999997654
No 85
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=98.10 E-value=3.9e-05 Score=53.61 Aligned_cols=99 Identities=10% Similarity=0.015 Sum_probs=65.0
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC---CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEe-C
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN---ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR-G 100 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~---~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~-~ 100 (144)
....++|-|..+... +.++.+|++|-++.|.+...+.. ..........|.|.++ .|..... . ..+|-++. .
T Consensus 69 R~Ll~eG~L~~k~~~-~~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~-~vre~a~--d-~~~~fli~~~ 143 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAA-GRLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKL-IVREVAH--E-EKGLFLISMG 143 (185)
T ss_dssp SCEEEEEEEEEECTT-CCEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSC-EEECCSS--C-SSEEEEECCS
T ss_pred CceeeeceEEEeccC-CCeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecce-EEeccCC--C-CCeEEEEEec
Confidence 355689999755432 37899999999998877654321 0000112356778874 4443322 2 23454543 2
Q ss_pred ---CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 101 ---GYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 101 ---~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.+.|-|.|.|..+++.|+.+|+.|+...
T Consensus 144 ~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~ 174 (185)
T 2lg1_A 144 MTDPEMVEVHASSKEERNSWIQIIQDTINTL 174 (185)
T ss_dssp SSCCCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcCCHHHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999998654
No 86
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=98.05 E-value=5.8e-05 Score=63.09 Aligned_cols=97 Identities=18% Similarity=0.179 Sum_probs=71.2
Q ss_pred CceEEEEEeeC--CCCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccc-cCCCCceEEEEeCC--
Q 035610 27 PGAIGPANKQG--DYIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-VLNKPFAFEHSRGG-- 101 (144)
Q Consensus 27 ~~~~G~L~k~~--~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~-~~~~~~~f~I~~~~-- 101 (144)
....|||.... ...+.-+..||||....|.||+++. ....+.+++|++ ..++..+. .+.+++.|.|..++
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDE----EKEKKYMLSVDN-LKLRDVEKGFMSSKHIFALFNTEQR 614 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTT----CCCEEEEEECTT-EEEEEC-------CEEEEEEETTSS
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchh----hhcccccccccc-cccchhhhccccccccccccCCccc
Confidence 56789999864 3335678899999999999999976 556788999988 55655554 35677999999654
Q ss_pred ------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 102 ------YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 102 ------~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+++-++|++.++.+.|...+.+|-+.+
T Consensus 615 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 647 (772)
T 3zvr_A 615 NVYKDYRQLELACETQEEVDSWKASFLRAGVYP 647 (772)
T ss_dssp CSBTTBSEEEEEESSHHHHHHHHHHHHHTTCCB
T ss_pred cccchhhhhhhhccccccchhhHHhhhhcccCC
Confidence 467799999999999999997765444
No 87
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.97 E-value=0.00019 Score=55.69 Aligned_cols=101 Identities=12% Similarity=0.028 Sum_probs=69.7
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--------------CCCCCcceEEeCCceEEEeeccccCC
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--------------TRGSTPRGFIPVGTCLTVKCAEDVLN 90 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--------------~~~~~~~~~i~L~~~~~v~~~~~~~~ 90 (144)
...+++|.|.+... .+.++.|+++|-++.|.+.+..... .........|.|.++ .|.... +
T Consensus 293 r~li~eG~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~-~v~~~~---~ 367 (418)
T 3t06_A 293 RKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAV-LIRSVA---T 367 (418)
T ss_dssp SCEEEEEEEEECCB-TTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGE-EEEECS---S
T ss_pred ceeEEeceEEEEeC-CCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhc-eecccc---c
Confidence 34558999987653 2468899999999999988754310 001122467888884 444332 3
Q ss_pred CCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610 91 KPFAFEHSRG-----GYTMYSVADTEKEKGERINSIGRAIVQHSR 130 (144)
Q Consensus 91 ~~~~f~I~~~-----~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~ 130 (144)
..+.|.|... .+.|.|.|.|.++++.|+++|++++..+..
T Consensus 368 ~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~~ 412 (418)
T 3t06_A 368 DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAHH 412 (418)
T ss_dssp CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred cCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCcc
Confidence 4467887753 378999999999999999999999977654
No 88
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.96 E-value=0.00028 Score=53.75 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=68.4
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--------------CCCCCcceEEeCCceEEEeeccccCC
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--------------TRGSTPRGFIPVGTCLTVKCAEDVLN 90 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--------------~~~~~~~~~i~L~~~~~v~~~~~~~~ 90 (144)
...+++|.|..... .+..+.|+++|-++.|.+.+...+. ......++.|+|.++ .|.... +
T Consensus 251 R~li~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~---~ 325 (368)
T 1xcg_A 251 RKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAV-LIRSVA---T 325 (368)
T ss_dssp SCEEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGE-EEEECS---S
T ss_pred ceEEeecceEeeec-CCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccce-eeeccc---C
Confidence 34557899886542 3467899999999999988764310 001122567888884 444322 3
Q ss_pred CCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 91 KPFAFEHSRG-----GYTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 91 ~~~~f~I~~~-----~~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.+++|.+... ...|.|+|.|.++++.|+++|+.|+..
T Consensus 326 ~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 326 DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4578887743 478999999999999999999999864
No 89
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=97.92 E-value=9.8e-05 Score=55.91 Aligned_cols=89 Identities=18% Similarity=0.050 Sum_probs=63.8
Q ss_pred ceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCCCCCC-----cceEEeCCceEEEeecccc--------------
Q 035610 28 GAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNITRGST-----PRGFIPVGTCLTVKCAEDV-------------- 88 (144)
Q Consensus 28 ~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~-----~~~~i~L~~~~~v~~~~~~-------------- 88 (144)
.++|.|.+..+ +.|+++|-++.|.+.+... . ... .+..|+|..+. +....+.
T Consensus 233 i~~G~l~~~~~-----~~~~~fLF~d~Ll~~k~~~-~--~~~~~~~v~k~~i~l~~l~-v~~~~d~~~~~~~s~~g~~~~ 303 (346)
T 2z0q_A 233 CCHGELKNNRG-----VKLHVFLFQEVLVITRAVT-H--NEQLCYQLYRQPIPVKDLT-LEDLQDGEVRLGGSLRGAFSN 303 (346)
T ss_dssp EEEEEEEETTS-----CEEEEEEESSEEEEEEEEE-E--TTEEEEEESSCCEEGGGCE-EEECCTTTSCCCSCC--CCSH
T ss_pred EEeceeEECCC-----cEEEEEECCCcEEEEEEec-c--CCceeeeeecCCcchhhce-eeecCCCccccCccccccccC
Confidence 56898876432 7899999999999887642 0 111 24568888844 4333221
Q ss_pred -CCCCceEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 89 -LNKPFAFEHSR----GGYTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 89 -~~~~~~f~I~~----~~~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
...+++|.|.. +...|.|+|.|.++++.|+++|+.|+
T Consensus 304 ~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 304 NERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp HHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 02368999985 36789999999999999999999987
No 90
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.91 E-value=0.00021 Score=54.39 Aligned_cols=101 Identities=12% Similarity=0.035 Sum_probs=68.5
Q ss_pred cCCceEEEEEeeCC---C--------CCCceeEEEEEeCCeEEEEecCCCCC------CCCCcceEEeCCceEEEeeccc
Q 035610 25 SQPGAIGPANKQGD---Y--------IKTWLRRWFILKQGEHFWFKDSHNIT------RGSTPRGFIPVGTCLTVKCAED 87 (144)
Q Consensus 25 ~~~~~~G~L~k~~~---~--------~~~w~~R~fvL~~~~l~y~k~~~~~~------~~~~~~~~i~L~~~~~v~~~~~ 87 (144)
.+.+++|.+....+ + ....+.|++.|-++.|.+.+...... .....+..|+|..+ .+....
T Consensus 208 g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~-~v~e~~- 285 (353)
T 1kz7_A 208 GKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAV-GITENV- 285 (353)
T ss_dssp CCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGE-EEECCB-
T ss_pred hhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccc-eeeEcC-
Confidence 35567888875311 1 12468899999999999888653000 01123466777774 333222
Q ss_pred cCCCCceEEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 88 VLNKPFAFEHSR--GGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 88 ~~~~~~~f~I~~--~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.+.++.|.|.. +...|.+.|.|.++++.|+++|+.++...
T Consensus 286 -~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 286 -KGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp -TTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 23568999986 35789999999999999999999987654
No 91
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=97.91 E-value=0.00024 Score=53.04 Aligned_cols=100 Identities=12% Similarity=0.041 Sum_probs=68.2
Q ss_pred CCceEEEEEeeCC--CCCCceeEEEEEeCCeEEEEecCCCCC--CCCCcceEEeCCceEEEeeccccCCCCceEEEEe--
Q 035610 26 QPGAIGPANKQGD--YIKTWLRRWFILKQGEHFWFKDSHNIT--RGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR-- 99 (144)
Q Consensus 26 ~~~~~G~L~k~~~--~~~~w~~R~fvL~~~~l~y~k~~~~~~--~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~-- 99 (144)
+....|.+....+ ..+..+.|++.|-++.|.+.+...... .....++.|+|..+ .|....+ +.++.|.|..
T Consensus 202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~-~v~e~~~--~~~~~F~i~~~~ 278 (311)
T 1nty_A 202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSEL-GVTEHVE--GDPCKFALWVGR 278 (311)
T ss_dssp CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGE-EEECCCT--TCTTEEEEEESS
T ss_pred CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccce-eeEEccC--CCCceEEEEeCC
Confidence 4445676655432 235678999999999999887642000 01123567788874 3433222 3568899986
Q ss_pred ---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 100 ---GGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 100 ---~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+...+.+.|.|.++++.|+++|+.++.+.
T Consensus 279 ~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 279 TPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp SCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 34678899999999999999999998653
No 92
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.90 E-value=0.00022 Score=54.47 Aligned_cols=99 Identities=9% Similarity=0.026 Sum_probs=66.1
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC--CCCC------------CCcceEEeCCceEEEeeccccCCC
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN--ITRG------------STPRGFIPVGTCLTVKCAEDVLNK 91 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~--~~~~------------~~~~~~i~L~~~~~v~~~~~~~~~ 91 (144)
.-+++|.|..+... +.++.|+++|-++.|.+.+.+.. ..+. ......|.|..+ .+..... ..
T Consensus 258 ~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~-~v~e~~~--~~ 333 (377)
T 3p6a_A 258 KLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSA-MTREVAT--DH 333 (377)
T ss_dssp CEEEEEEEEEESSS-SCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGE-EEEECTT--CT
T ss_pred eEEEECCcEEEecC-CCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhh-hcccccc--cc
Confidence 44579999766432 37899999999999998875431 0000 011346788884 4444322 23
Q ss_pred CceEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 92 PFAFEHSR---GGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 92 ~~~f~I~~---~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
...|.+.. +...|.+.|.|.++++.|++.|++|+...
T Consensus 334 ~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 334 KAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp TEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred ceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 34455553 34678899999999999999999999654
No 93
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.85 E-value=0.00036 Score=53.58 Aligned_cols=99 Identities=16% Similarity=0.054 Sum_probs=66.7
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC--------------CCCCCcceEEeCCceEEEeeccccCCC
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI--------------TRGSTPRGFIPVGTCLTVKCAEDVLNK 91 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~--------------~~~~~~~~~i~L~~~~~v~~~~~~~~~ 91 (144)
.-+++|.|...... +..+.|+++|-++.|.+.+..... ......++.|.|.++ .|..... ..
T Consensus 256 ~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~~--d~ 331 (385)
T 1txd_A 256 KMIHEGPLVWKVNR-DKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTV-LVRQVAT--DN 331 (385)
T ss_dssp CEEEEEEEEEESSS-SCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGE-EEEECCC---C
T ss_pred eEEEECcEEEEcCC-CCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceecccc-ccccccc--CC
Confidence 44578998765432 467899999999999887754200 001123567888884 4443322 23
Q ss_pred CceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 92 PFAFEHSRG---GYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 92 ~~~f~I~~~---~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
++.|.|... .+.|.|+|.|.++++.|+++|++++...
T Consensus 332 ~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~ 371 (385)
T 1txd_A 332 KALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASV 371 (385)
T ss_dssp CEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 456666642 4688899999999999999999988764
No 94
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.84 E-value=2.2e-06 Score=68.02 Aligned_cols=97 Identities=16% Similarity=-0.026 Sum_probs=0.0
Q ss_pred CceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCCC--CC------------C-CcceEEeCCceEEEeeccccCCC
Q 035610 27 PGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNIT--RG------------S-TPRGFIPVGTCLTVKCAEDVLNK 91 (144)
Q Consensus 27 ~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~~--~~------------~-~~~~~i~L~~~~~v~~~~~~~~~ 91 (144)
..++|.|.+. +..+.|+|+|-++.|.+.+...... .. . .-+..|+|+++ .|...++..+.
T Consensus 253 li~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~-~v~~~~d~~~~ 327 (510)
T 3jzy_A 253 LLHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEV-LVKLPTDPSSD 327 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEeceEEEc----CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhhe-EEeccCCCCcc
Confidence 3456666554 3468999999999998877543000 00 0 01455677773 44444333467
Q ss_pred CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 92 PFAFEHSRGGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 92 ~~~f~I~~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+++|.|....+.|.++|.|.+++..|+++|++++...
T Consensus 328 ~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 328 EPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp -------------------------------------
T ss_pred ccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999988654
No 95
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.84 E-value=0.00028 Score=56.73 Aligned_cols=100 Identities=11% Similarity=0.020 Sum_probs=65.8
Q ss_pred CCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC--CCCC------------CCcceEEeCCceEEEeeccccCCC
Q 035610 26 QPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN--ITRG------------STPRGFIPVGTCLTVKCAEDVLNK 91 (144)
Q Consensus 26 ~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~--~~~~------------~~~~~~i~L~~~~~v~~~~~~~~~ 91 (144)
.-+++|.|...... +.++.|+|+|-++.|.+.+.+.. ..+. ......|.|..+ .|.... ..
T Consensus 411 ~LI~eG~l~~~~~~-~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l-~v~e~~---~d 485 (536)
T 3odw_A 411 KLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSA-MTREVA---TD 485 (536)
T ss_dssp CEEEEEEEEEESCC----CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGE-EEEECT---TC
T ss_pred eeeeecceEEEecC-CCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccc-eeeccc---cc
Confidence 45578999777532 36789999999999998875431 0000 012346888884 444432 22
Q ss_pred CceEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Q 035610 92 PFAFEHSR----GGYTMYSVADTEKEKGERINSIGRAIVQHSR 130 (144)
Q Consensus 92 ~~~f~I~~----~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~ 130 (144)
..+|.+.. ....|.|.|.|.++++.|++.|++||.....
T Consensus 486 ~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~~ 528 (536)
T 3odw_A 486 HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKV 528 (536)
T ss_dssp TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSCC
T ss_pred CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCCC
Confidence 34455543 3568899999999999999999999977654
No 96
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=97.70 E-value=0.0008 Score=51.16 Aligned_cols=100 Identities=9% Similarity=-0.048 Sum_probs=66.5
Q ss_pred CCceEEEEEeeCC-----CCCCceeEEEEEeCCeEEEEecCCCCC-----CCCCcceEEeCCceEEEeeccccCCCCceE
Q 035610 26 QPGAIGPANKQGD-----YIKTWLRRWFILKQGEHFWFKDSHNIT-----RGSTPRGFIPVGTCLTVKCAEDVLNKPFAF 95 (144)
Q Consensus 26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y~k~~~~~~-----~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f 95 (144)
+....|-+....+ ..+..+.|+++|-++.|.+.+...... .....+..|+|..+ .+....+ +.++.|
T Consensus 206 ~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~-~v~~~~~--~~~~~F 282 (354)
T 2rgn_B 206 KLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCL-GLEGNLQ--GDPCRF 282 (354)
T ss_dssp CEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGE-EEEESGG--GCTTEE
T ss_pred cccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccce-eeeeccC--CCCceE
Confidence 3445676654421 124678999999999999888653000 01223467788774 3332222 346889
Q ss_pred EEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 96 EHSRG-----GYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 96 ~I~~~-----~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
.|... ...|.|.|.|.++++.|+++|++++..+
T Consensus 283 ~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 283 ALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp EEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 99852 3688999999999999999999988654
No 97
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=97.68 E-value=0.00033 Score=60.49 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=71.1
Q ss_pred cCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCCC-------CCCCCcceEEeCCceEEEeeccccCCCCceEEE
Q 035610 25 SQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHNI-------TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEH 97 (144)
Q Consensus 25 ~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~~-------~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I 97 (144)
..-.++|.|.+.+.. +.|++.|-++.|.+.+..... ......++.|+|..+. |...++....+++|.|
T Consensus 442 r~Li~eG~l~~~~~k----~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~-V~~~~d~~~~~~~F~I 516 (1049)
T 3ksy_A 442 NEFIMEGTLTRVGAK----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQ-INDKDDTNEYKHAFEI 516 (1049)
T ss_dssp SCCCCEEEEEETTCS----SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCC-CCCCCCSSSCCSEEEE
T ss_pred ceEEEeceEEEEccC----ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceE-EEECCCCccccceEEE
Confidence 345689999887633 889999999999998876310 0123457788888844 4444433356799999
Q ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 98 SRGG-YTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 98 ~~~~-~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
...+ ..|.|.|.|.++++.|+++|+.+.
T Consensus 517 ~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q 545 (1049)
T 3ksy_A 517 ILKDENSVIFSAKSAEEKNNWMAALISLQ 545 (1049)
T ss_dssp CCTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EcCCCCEEEEeCCCHHHHHHHHHHHHHHH
Confidence 8765 489999999999999999998754
No 98
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=97.47 E-value=0.0039 Score=51.60 Aligned_cols=94 Identities=16% Similarity=0.267 Sum_probs=67.6
Q ss_pred ecCCceEEEEEeeCC-CCCCceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeC-C
Q 035610 24 WSQPGAIGPANKQGD-YIKTWLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRG-G 101 (144)
Q Consensus 24 ~~~~~~~G~L~k~~~-~~~~w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~-~ 101 (144)
...+.+.|++.|+++ ....|++|++.|..+.+.+.... ..+...+.++.+..|.... ....++|.+... .
T Consensus 556 ~~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~------~~~~~l~~~~~v~~v~k~~--i~~~~~l~~~~k~~ 627 (689)
T 3v5w_A 556 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEG------EAPQSLLTMEEIQSVEETQ--IKERKCLLLKIRGG 627 (689)
T ss_dssp SSCCCEEEEEEEC-------CEEEEEEEETTEEEEECTT------SCCCEEEEGGGEEEEEEEE--SSSCEEEEEEETTT
T ss_pred CCcceeecccccCCCcccchhhhhccccCCCcccccccC------CCCcceeeeccccccccCc--CCCCcceeeeecCC
Confidence 356778999999975 45699999999999988765432 3456677888866654332 345578888865 5
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 102 YTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 102 ~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
+.+++.+++..++.+|+..|+.+-
T Consensus 628 k~f~~~t~~~~~~~~W~~~i~~~~ 651 (689)
T 3v5w_A 628 KQFILQCDSDPELVQWKKELRDAY 651 (689)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cEEEEECCChHHHHHHHHHHHHHH
Confidence 778899999999999999998754
No 99
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=97.35 E-value=0.0079 Score=45.90 Aligned_cols=102 Identities=10% Similarity=-0.036 Sum_probs=63.0
Q ss_pred CCceEEEEEeeCC-----CCCCceeEEEEEeCCeEEE-EecCCC-C--------------CCCCCcceEEeCCceEEEee
Q 035610 26 QPGAIGPANKQGD-----YIKTWLRRWFILKQGEHFW-FKDSHN-I--------------TRGSTPRGFIPVGTCLTVKC 84 (144)
Q Consensus 26 ~~~~~G~L~k~~~-----~~~~w~~R~fvL~~~~l~y-~k~~~~-~--------------~~~~~~~~~i~L~~~~~v~~ 84 (144)
+....|.+..... ..+.-+.|++.|-++.|.+ .+.... . ......++.|+|..+ .|..
T Consensus 237 ~ll~~~~~~~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~-~v~~ 315 (377)
T 1foe_A 237 DLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEAL-QVRA 315 (377)
T ss_dssp GEEEEEEEEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGE-EEEC
T ss_pred ceeeecceeeccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccce-EEEe
Confidence 3445666554321 2234578999999998665 342110 0 002234578889884 4444
Q ss_pred ccc-cCCCCceEEEE--------eCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 85 AED-VLNKPFAFEHS--------RGGYTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 85 ~~~-~~~~~~~f~I~--------~~~~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
..+ .......|.|. .+.+.|.++|.|.++++.|+++|.+++...
T Consensus 316 ~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~ 368 (377)
T 1foe_A 316 LPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDK 368 (377)
T ss_dssp CCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHH
Confidence 333 21222347776 235789999999999999999999998653
No 100
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.53 E-value=0.019 Score=39.56 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=42.6
Q ss_pred eEEeCCceEEEeeccccCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 72 GFIPVGTCLTVKCAEDVLNKPFAFEHSRGG--YTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 72 ~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~--~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
..|+|..|...+.....-..++.|+|..++ .+.+|.|.+..++.+|+.+|...|.
T Consensus 121 ~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp EEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred eeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 678898876655443211367899999875 4668899999999999999998773
No 101
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=96.52 E-value=0.027 Score=41.23 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=41.7
Q ss_pred eEEeCCceEEEeeccccCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 035610 72 GFIPVGTCLTVKCAEDVLNKPFAFEHSRGG--YTMYSVADTEKEKGERINSIGRAI 125 (144)
Q Consensus 72 ~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~--~~~~l~a~s~~e~~~Wi~al~~ai 125 (144)
+.++|..|...+.....-.++++|+|..++ .+.+|.|.+..++.+|+.+|..+|
T Consensus 206 ~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 206 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp EEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 677888866544332212378999999764 567899999999999999999987
No 102
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=95.96 E-value=0.092 Score=33.78 Aligned_cols=99 Identities=8% Similarity=-0.004 Sum_probs=66.6
Q ss_pred eecCCceEEEEEeeCCCCCCceeEEEEEeCCeEEEEecCCC-CCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCC
Q 035610 23 FWSQPGAIGPANKQGDYIKTWLRRWFILKQGEHFWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGG 101 (144)
Q Consensus 23 ~~~~~~~~G~L~k~~~~~~~w~~R~fvL~~~~l~y~k~~~~-~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~ 101 (144)
...+..+.|.+....+. +.-+.|++.|-...|.+.+.... ..+...-+..|.++.+......++ +.+..|.|-.++
T Consensus 6 ~~G~Ll~q~~f~V~~~~-~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~--~d~~kFeiw~~~ 82 (119)
T 1fho_A 6 KLGRIIRHDAFQVWEGD-EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTD--EDTIVLQPQEPG 82 (119)
T ss_dssp CCCCSSEEEEEEECSTT-CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTT--CCEEEEECCSTT
T ss_pred HcCCccccCceEEEeCC-CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCC--CCCcEEEEccCC
Confidence 34566777888777543 56788999999999999887521 112344567888887433222221 334568886443
Q ss_pred --eEEEE--EcCCHH-HHHHHHHHHHHH
Q 035610 102 --YTMYS--VADTEK-EKGERINSIGRA 124 (144)
Q Consensus 102 --~~~~l--~a~s~~-e~~~Wi~al~~a 124 (144)
..|.+ .|.|.+ .++.|+..|+..
T Consensus 83 ~~~~~il~~qA~s~e~~K~~Wv~~I~~~ 110 (119)
T 1fho_A 83 LPSFRIKPKDFETSEYVRKAWLRDIAEE 110 (119)
T ss_dssp CCCBCCCCCSSSSCSHHHHHHHHHHHTC
T ss_pred CCceEEEeeecCCcHHHHHHHHHHHHHH
Confidence 45566 899999 999999999873
No 103
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=92.54 E-value=1.3 Score=37.31 Aligned_cols=78 Identities=6% Similarity=-0.038 Sum_probs=53.9
Q ss_pred eeEEEEEeCC--eEEEEecCCCCCCCCCcceEEeCCceEEEeeccccC-------------------CCCceEEEEeCC-
Q 035610 44 LRRWFILKQG--EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVL-------------------NKPFAFEHSRGG- 101 (144)
Q Consensus 44 ~~R~fvL~~~--~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~-------------------~~~~~f~I~~~~- 101 (144)
+.|+|.|... .|+|. ... .....+.|+.+..|+...... ....+|.|+...
T Consensus 34 k~~~frLd~d~~~l~W~-~~~------k~~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e~~~fTIvyg~~ 106 (799)
T 2zkm_X 34 SPVILRVDPKGYYLYWT-YQS------KEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFLLKTLTVVSGPD 106 (799)
T ss_dssp EEEEEEECTTSCEEEEE-ETT------SCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGGGTEEEEEECSS
T ss_pred eEEEEEEcCCCCEEEEc-cCC------CcCceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccccceEEEEECCC
Confidence 6788889754 34444 332 124689999988887653210 123689998653
Q ss_pred ----eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 035610 102 ----YTMYSVADTEKEKGERINSIGRAIVQH 128 (144)
Q Consensus 102 ----~~~~l~a~s~~e~~~Wi~al~~ai~~~ 128 (144)
+.+.|.|.+.++++.|+..|+..+...
T Consensus 107 ~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~ 137 (799)
T 2zkm_X 107 MVDLTFHNFVSYKENVGKAWAEDVLALVKHP 137 (799)
T ss_dssp SSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred ccceeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999876543
No 104
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=92.14 E-value=2.6 Score=35.61 Aligned_cols=90 Identities=8% Similarity=0.023 Sum_probs=59.7
Q ss_pred EEEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCceEEEeecccc--------------CC------
Q 035610 32 PANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV--------------LN------ 90 (144)
Q Consensus 32 ~L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~--------------~~------ 90 (144)
.+.|-+...+..+.|.|.|... ...|++++. .. ....+.|+.+..|+..... .+
T Consensus 27 ~~~K~~~~s~~~~~~~f~lD~d~~~L~W~~~~----k~-~~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~g~~~~~~ 101 (816)
T 3qr0_A 27 KFLKWEEGSSGFIEILLRVDPKGYFLYWKIEG----KE-DTQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGSSNIPL 101 (816)
T ss_dssp EEEEECTTCCCCEEEEEEECTTSCEEEECCTT----CS-SCEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHSSCTTSCH
T ss_pred eEEEECCCCCcceeEEEEEcCCCCEEEEeCCC----CC-cCcEEEeeeeeeeecCCcCCCCccHHHHHHHHhcCCCcccc
Confidence 4555555444457799999863 333444432 11 1378999988888766441 11
Q ss_pred CCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 035610 91 KPFAFEHSRGG-----YTMYSVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 91 ~~~~f~I~~~~-----~~~~l~a~s~~e~~~Wi~al~~ai~ 126 (144)
...+|.|+... +.+.|.|.+.++++.|+..|+..+.
T Consensus 102 e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~ 142 (816)
T 3qr0_A 102 QDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY 142 (816)
T ss_dssp HHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 23689999654 3348999999999999999988653
No 105
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=90.53 E-value=3 Score=35.58 Aligned_cols=93 Identities=4% Similarity=-0.049 Sum_probs=59.7
Q ss_pred eEEE-EEeeCCCCCCceeEEEEEeCC-eEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------------------
Q 035610 29 AIGP-ANKQGDYIKTWLRRWFILKQG-EHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------------------ 88 (144)
Q Consensus 29 ~~G~-L~k~~~~~~~w~~R~fvL~~~-~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------------------ 88 (144)
+.|- +.|-+...+.-+.++|.|..+ ...|+.++. .....+.|+.+..|+...+.
T Consensus 22 ~~Gt~f~K~~~~~~~~k~~~frLD~d~~~L~W~~~~------ke~~~l~Is~IkeIR~G~~a~~pKd~klr~~~~~~~~~ 95 (885)
T 3ohm_B 22 RRGSKFIKWDEETSSRNLVTLRVDPNGFFLYWTGPN------MEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPD 95 (885)
T ss_dssp HHCEEEEEECTTCCSCCEEEEEECTTSCEEEEECGG------GCEEEEEGGGEEEEEETTTSCCCCSHHHHHCC------
T ss_pred hCCCeEEEECCCCCCcEEEEEEECCCCCEEEEeCCC------CCCceEeeehhhhhhcCcCCCCCccHHHHHHhccCccc
Confidence 3444 455454433346678888763 334444432 22457889988777765421
Q ss_pred -CCCCceEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 035610 89 -LNKPFAFEHSRGG-----YTMYSVADTEKEKGERINSIGRAIVQ 127 (144)
Q Consensus 89 -~~~~~~f~I~~~~-----~~~~l~a~s~~e~~~Wi~al~~ai~~ 127 (144)
.....+|.|+... ..+.|.|.+.++++.|+..|+..+..
T Consensus 96 ~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 96 ARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp ---CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred CcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 1224689998754 35889999999999999999886543
No 106
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=89.36 E-value=2.9 Score=31.05 Aligned_cols=96 Identities=18% Similarity=0.104 Sum_probs=61.8
Q ss_pred CCceeEEEEEe-----CCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHH
Q 035610 41 KTWLRRWFILK-----QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKG 115 (144)
Q Consensus 41 ~~w~~R~fvL~-----~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~ 115 (144)
+.=|.||.+|. .+.+.+++.+.+...-.+....-+|+....|... .....+|.|.. ++.|+-.|.+..|++
T Consensus 132 kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~---~~~~~gF~LTl-~K~YyW~A~s~kER~ 207 (320)
T 3a58_A 132 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKD---LEISEGFILTM-SKKYYWETNSAKERT 207 (320)
T ss_dssp GGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEEC---SSCTTEEEEES-SSEEEEEESSHHHHH
T ss_pred cccCceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhcc---cCCCCceEEEe-CCceEEecCCHHHHH
Confidence 45678998875 3458888875411111123344566665555321 23447788887 789999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEecc
Q 035610 116 ERINSIGRAIVQHSRSVTESEVVEYD 141 (144)
Q Consensus 116 ~Wi~al~~ai~~~~~~~~~~~~~~~~ 141 (144)
.+|..|-+...+...+- ..+++.|+
T Consensus 208 ~FI~sLvKiy~KYtgGk-~P~LvNf~ 232 (320)
T 3a58_A 208 VFIKSLITLYIQTFEGH-VPELVNWD 232 (320)
T ss_dssp HHHHHHHHHHHHHTTTC-BCEEESCC
T ss_pred HHHHHHHHHHHHHcCCC-CCeeeccC
Confidence 99999999776665332 23455544
No 107
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=86.19 E-value=6.7 Score=27.34 Aligned_cols=82 Identities=12% Similarity=0.118 Sum_probs=51.0
Q ss_pred eEEEEEeCCe-EEEEecCCCCCC----CCCcceEEeCCceEEEeecccc-----C---C-----CCceEEEEeC-CeEEE
Q 035610 45 RRWFILKQGE-HFWFKDSHNITR----GSTPRGFIPVGTCLTVKCAEDV-----L---N-----KPFAFEHSRG-GYTMY 105 (144)
Q Consensus 45 ~R~fvL~~~~-l~y~k~~~~~~~----~~~~~~~i~L~~~~~v~~~~~~-----~---~-----~~~~f~I~~~-~~~~~ 105 (144)
.+||.|..+. ...|.+-.+... -......|+|..+..|....+. . . ....|.|... +..+-
T Consensus 50 ~~f~rLs~n~k~L~y~d~~~~~~~~p~ld~l~~kI~ls~Is~V~sg~~~p~~~~~~~~k~~~~~~~laFSii~~~~~~L~ 129 (203)
T 3a98_B 50 FWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLN 129 (203)
T ss_dssp EEEEEECTTSSEEEEEECCBCSSCBCCBCCSCCEEEGGGEEEEEEGGGSTTC--------CCTTGGGEEEEEETTTEEEE
T ss_pred eEEEEECCCCceEEEccccccccCCCChhhcccceeHhhhhHhhcCCCCccccccccccccCcccceEEEEecCCCceEE
Confidence 3577787643 334444321000 0223568889888776543221 0 0 1158888865 46788
Q ss_pred EEcCCHHHHHHHHHHHHHHHH
Q 035610 106 SVADTEKEKGERINSIGRAIV 126 (144)
Q Consensus 106 l~a~s~~e~~~Wi~al~~ai~ 126 (144)
|.|.|..+...|++.|+--+.
T Consensus 130 fvA~s~~~~~~W~DGL~~Llg 150 (203)
T 3a98_B 130 FIAPDKHEYCIWTDGLNALLG 150 (203)
T ss_dssp EECSSHHHHHHHHHHHHHHTT
T ss_pred EecCCHHHHHHHHHHHHHHhc
Confidence 999999999999999988664
No 108
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=86.18 E-value=6.1 Score=26.85 Aligned_cols=86 Identities=15% Similarity=0.030 Sum_probs=57.9
Q ss_pred CCceeEEEEEe-----CCeEEEEecCCCCCCCCCcceEEeCCceEEEeeccccCCCCceEEEEeCCeEEEEEcCCHHHHH
Q 035610 41 KTWLRRWFILK-----QGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSRGGYTMYSVADTEKEKG 115 (144)
Q Consensus 41 ~~w~~R~fvL~-----~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~~~~~~~l~a~s~~e~~ 115 (144)
..=|.||.+|. .+.+..++.+.+.....+...+=+|.....|.... ....+|.|.. ++.|+-.|.+..|+.
T Consensus 62 ~~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~---~~~~gF~ltl-~K~Y~W~a~s~~Er~ 137 (171)
T 3hie_A 62 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDL---EISEGFILTM-SKKYYWETNSAKERT 137 (171)
T ss_dssp GGEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECS---SCTTEEEEES-SSEEEEECSSHHHHH
T ss_pred CCccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccC---CCCCcEEEEe-CCeEEEecCCHHHHH
Confidence 34688998884 34578888764111111223445666655553321 2457898887 599999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q 035610 116 ERINSIGRAIVQHSR 130 (144)
Q Consensus 116 ~Wi~al~~ai~~~~~ 130 (144)
..|.+|-+...+...
T Consensus 138 ~FI~sL~K~y~ky~~ 152 (171)
T 3hie_A 138 VFIKSLITLYIQTFE 152 (171)
T ss_dssp HHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999997776653
No 109
>2rrf_A Zinc finger FYVE domain-containing protein 21; zfyve21, PH, unknown function; NMR {Homo sapiens}
Probab=84.77 E-value=6.3 Score=25.74 Aligned_cols=77 Identities=10% Similarity=-0.003 Sum_probs=48.4
Q ss_pred ceeEEEEEeCCeEEEEecCCCCCCCCCcceEEeCCceEEEeecccc------CCCCceEEEEeCC------eEEEE-EcC
Q 035610 43 WLRRWFILKQGEHFWFKDSHNITRGSTPRGFIPVGTCLTVKCAEDV------LNKPFAFEHSRGG------YTMYS-VAD 109 (144)
Q Consensus 43 w~~R~fvL~~~~l~y~k~~~~~~~~~~~~~~i~L~~~~~v~~~~~~------~~~~~~f~I~~~~------~~~~l-~a~ 109 (144)
....-|.|.+++-+.+-+-. .+..|.|..+..|....+. ..+..+|.|.... ..+.+ .++
T Consensus 34 ~e~~vCrLS~nhR~L~ldgd-------sh~eIels~I~~vqiL~eg~~~ggg~~rasGm~l~Yk~~g~~~~~ql~lt~~~ 106 (141)
T 2rrf_A 34 PETMTCRLSNNQRYLFLDGD-------SHYEIEIVHISTVQILTEGFPPGGGNARATGMFLQYTVPGTEGVTQLKLTVVE 106 (141)
T ss_dssp CEEEEEEECTTSSEEEEESS-------SEEEEETTTCCCEECCCCSSCSSSSSCCCSCCEEEECCTTSSSCEEEEEECCC
T ss_pred CceEEEEecCCeeEEEEcCC-------CCCcEEeeeeeEEEEeccCCCCCCCcceeeEEEEEeeCCCccceeEEEEeecc
Confidence 44455678776544333321 2688889888776544321 1366788888542 22333 455
Q ss_pred C----HHHHHHHHHHHHHHHH
Q 035610 110 T----EKEKGERINSIGRAIV 126 (144)
Q Consensus 110 s----~~e~~~Wi~al~~ai~ 126 (144)
+ ......||.|+++|+.
T Consensus 107 d~~~~kk~s~aWlaAm~KA~K 127 (141)
T 2rrf_A 107 DVTVGRRQAVAWLVAMHKAAK 127 (141)
T ss_dssp SSSCCHHHHHHHHHHHHHHHH
T ss_pred ccCcchhhhHHHHHHHHHHHH
Confidence 5 7788899999999875
No 110
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=67.90 E-value=21 Score=22.78 Aligned_cols=82 Identities=12% Similarity=0.036 Sum_probs=55.4
Q ss_pred ceeEEEEEeCCeEEEEecCCCC-CCCCCcceEEeCCceEEEeeccccCCCCceEEEEe-C-----CeEEEEEcCCHHHHH
Q 035610 43 WLRRWFILKQGEHFWFKDSHNI-TRGSTPRGFIPVGTCLTVKCAEDVLNKPFAFEHSR-G-----GYTMYSVADTEKEKG 115 (144)
Q Consensus 43 w~~R~fvL~~~~l~y~k~~~~~-~~~~~~~~~i~L~~~~~v~~~~~~~~~~~~f~I~~-~-----~~~~~l~a~s~~e~~ 115 (144)
-..|-+++.|+.+.+-=.+... .-+.....++.++.+..+... ...|+.|.|.- . .+.|.|-|.+.+|+.
T Consensus 27 ~~ER~L~IDGdYIHImP~~~~~~~~~~~KTtS~H~s~Vv~~K~s---~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~ 103 (121)
T 3ulb_A 27 KHERTLAIDGDYIYIVPPEGRIHWHDNVKTKSLHISQVVLVKKS---KRVPEHFKIFVRREGQDDIKRYYFEAVSGQECT 103 (121)
T ss_dssp EEEEEEEEETTEEEEECCC-------CCCCEEEEGGGEEEEEEC---SSCTTEEEEEECCTTCSSCEEEEEEESSHHHHH
T ss_pred cccEEEEEcCceEEEecCCCCcccccCCcEEEEEEeeEEEEEec---ccCCCcEEEEEEccCCCCcceeEEEeCCHHHHH
Confidence 3557778888887765333200 001234567788886655443 36778899873 2 389999999999999
Q ss_pred HHHHHHHHHHHh
Q 035610 116 ERINSIGRAIVQ 127 (144)
Q Consensus 116 ~Wi~al~~ai~~ 127 (144)
+=+..|+..+..
T Consensus 104 EIV~~ik~~~~~ 115 (121)
T 3ulb_A 104 EIVTRLQNLLSA 115 (121)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987653
No 111
>2p82_A Cysteine protease ATG4A; autophagy, hydrolase, protein transport, thiol Pro transport, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: d.3.1.22
Probab=21.35 E-value=2.7e+02 Score=21.00 Aligned_cols=38 Identities=13% Similarity=0.171 Sum_probs=25.8
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhcCCCCCcceeEe
Q 035610 100 GGYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVE 139 (144)
Q Consensus 100 ~~~~~~l~a~s~~e~~~Wi~al~~ai~~~~~~~~~~~~~~ 139 (144)
++=.+-|.+.|.+|.++|...|++.+.. ....=.++++
T Consensus 312 PS~~lGF~c~~~~df~d~~~~i~~~~~~--~~~plF~v~~ 349 (355)
T 2p82_A 312 PSVALGFFCKEEKDFDNWCSLVQKEILK--ENLRMFELVQ 349 (355)
T ss_dssp SEEEEEEEESSHHHHHHHHHHHHHHTTT--SSSCSSEEES
T ss_pred cceEEEEEECCHHHHHHHHHHHHHHhcc--CCCCcEEEec
Confidence 3334567899999999999999986544 3333344443
No 112
>2x5r_A Hypothetical protein ORF126; unknown function, viral protein; 2.00A {Pyrobaculum spherical virus}
Probab=21.13 E-value=61 Score=19.55 Aligned_cols=33 Identities=18% Similarity=0.060 Sum_probs=24.6
Q ss_pred CCCceEEEE-eCCeEEEEE--cCCHHHHHHHHHHHH
Q 035610 90 NKPFAFEHS-RGGYTMYSV--ADTEKEKGERINSIG 122 (144)
Q Consensus 90 ~~~~~f~I~-~~~~~~~l~--a~s~~e~~~Wi~al~ 122 (144)
..++-|.+. -.+++||+- |+..+.+-.|+.+|-
T Consensus 88 ngknhfrvvairngtyyldavcdkcepritwlsaiv 123 (127)
T 2x5r_A 88 NGKNHFRVVAIRNGTYYLDAVCDKCEPRITWLSAIV 123 (127)
T ss_dssp CSSSCEEEEEETTTTEEEEEEETTTCTTHHHHHHHH
T ss_pred cCCCcEEEEEEecCcEEeeeeccccccceeEEEEEE
Confidence 445678877 467788874 777788889999873
No 113
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=20.49 E-value=79 Score=19.62 Aligned_cols=17 Identities=18% Similarity=0.161 Sum_probs=14.3
Q ss_pred EcCCHHHHHHHHHHHHH
Q 035610 107 VADTEKEKGERINSIGR 123 (144)
Q Consensus 107 ~a~s~~e~~~Wi~al~~ 123 (144)
.++|..+..+|+++...
T Consensus 24 naPSSkeTyEWLqAal~ 40 (111)
T 1xg8_A 24 NAPTSKDIYDWLQPLLK 40 (111)
T ss_dssp SSCCHHHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHh
Confidence 38899999999988655
Done!