Query 035615
Match_columns 223
No_of_seqs 357 out of 1908
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 07:10:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035615.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035615hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kb6_A D-lactate dehydrogenase 100.0 2.6E-64 8.8E-69 441.4 14.3 219 2-221 61-301 (334)
2 4g2n_A D-isomer specific 2-hyd 100.0 7.5E-62 2.6E-66 426.8 22.0 219 3-221 92-318 (345)
3 4dgs_A Dehydrogenase; structur 100.0 3E-62 1E-66 428.6 18.3 219 3-221 91-313 (340)
4 3evt_A Phosphoglycerate dehydr 100.0 3.3E-61 1.1E-65 419.8 20.6 217 2-221 58-283 (324)
5 3hg7_A D-isomer specific 2-hyd 100.0 3.5E-61 1.2E-65 419.4 20.5 214 3-221 65-286 (324)
6 3jtm_A Formate dehydrogenase, 100.0 4.3E-61 1.5E-65 423.0 16.7 219 3-221 84-312 (351)
7 3k5p_A D-3-phosphoglycerate de 100.0 5.3E-60 1.8E-64 422.8 23.1 217 3-221 78-304 (416)
8 3pp8_A Glyoxylate/hydroxypyruv 100.0 7.7E-60 2.6E-64 409.9 20.7 214 4-221 58-285 (315)
9 1sc6_A PGDH, D-3-phosphoglycer 100.0 7.4E-60 2.5E-64 422.3 20.7 217 3-221 67-293 (404)
10 2pi1_A D-lactate dehydrogenase 100.0 9.9E-61 3.4E-65 418.7 13.5 219 2-221 61-301 (334)
11 4e5n_A Thermostable phosphite 100.0 5E-60 1.7E-64 413.7 17.9 218 3-221 65-299 (330)
12 4hy3_A Phosphoglycerate oxidor 100.0 2.6E-59 9E-64 413.0 18.4 219 2-221 93-321 (365)
13 2yq5_A D-isomer specific 2-hyd 100.0 1.5E-59 5E-64 412.0 15.7 217 4-221 69-305 (343)
14 3gvx_A Glycerate dehydrogenase 100.0 7.8E-59 2.7E-63 399.1 18.1 215 2-222 46-264 (290)
15 3gg9_A D-3-phosphoglycerate de 100.0 4.7E-59 1.6E-63 410.4 17.1 219 2-221 68-307 (352)
16 2nac_A NAD-dependent formate d 100.0 3.6E-58 1.2E-62 409.3 17.8 219 3-221 111-339 (393)
17 1dxy_A D-2-hydroxyisocaproate 100.0 6.7E-58 2.3E-62 400.8 16.9 218 3-221 64-302 (333)
18 2j6i_A Formate dehydrogenase; 100.0 3.2E-58 1.1E-62 407.0 14.9 219 3-221 82-318 (364)
19 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 1.5E-57 5.1E-62 398.5 18.3 216 3-221 87-310 (335)
20 1xdw_A NAD+-dependent (R)-2-hy 100.0 2.4E-57 8.3E-62 397.0 18.1 218 3-221 65-304 (331)
21 1j4a_A D-LDH, D-lactate dehydr 100.0 3.1E-57 1.1E-61 396.6 17.7 217 3-221 66-304 (333)
22 1wwk_A Phosphoglycerate dehydr 100.0 1.1E-56 3.7E-61 389.2 18.7 217 2-221 63-288 (307)
23 3ba1_A HPPR, hydroxyphenylpyru 100.0 3.8E-56 1.3E-60 389.5 20.5 218 3-221 85-306 (333)
24 2cuk_A Glycerate dehydrogenase 100.0 6E-56 2E-60 385.2 21.5 216 3-221 63-284 (311)
25 2ekl_A D-3-phosphoglycerate de 100.0 1.6E-56 5.6E-61 389.1 17.2 214 3-221 66-290 (313)
26 1gdh_A D-glycerate dehydrogena 100.0 8.2E-56 2.8E-60 385.7 20.7 219 3-221 64-293 (320)
27 1qp8_A Formate dehydrogenase; 100.0 4.1E-56 1.4E-60 384.8 17.6 211 3-218 48-264 (303)
28 1mx3_A CTBP1, C-terminal bindi 100.0 3.1E-55 1E-59 385.5 21.3 220 2-221 82-316 (347)
29 3oet_A Erythronate-4-phosphate 100.0 9.4E-55 3.2E-59 385.0 12.6 198 3-221 59-264 (381)
30 2w2k_A D-mandelate dehydrogena 100.0 3.6E-53 1.2E-57 372.9 17.3 219 3-221 77-311 (348)
31 2d0i_A Dehydrogenase; structur 100.0 5.9E-53 2E-57 369.5 14.2 218 2-221 61-291 (333)
32 2gcg_A Glyoxylate reductase/hy 100.0 4.6E-52 1.6E-56 363.5 19.2 217 4-221 75-302 (330)
33 2dbq_A Glyoxylate reductase; D 100.0 2.1E-52 7.1E-57 366.3 16.2 218 3-221 65-295 (334)
34 2o4c_A Erythronate-4-phosphate 100.0 1.1E-52 3.8E-57 372.3 12.7 198 3-221 56-261 (380)
35 1ygy_A PGDH, D-3-phosphoglycer 100.0 6.4E-51 2.2E-55 376.1 19.6 216 3-221 64-287 (529)
36 1v8b_A Adenosylhomocysteinase; 100.0 2.3E-34 7.9E-39 261.0 1.1 193 3-219 191-399 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 1.1E-34 3.9E-39 263.9 -1.6 190 4-219 212-416 (494)
38 3d4o_A Dipicolinate synthase s 99.9 1.8E-24 6.1E-29 185.7 9.9 137 3-170 94-248 (293)
39 3ce6_A Adenosylhomocysteinase; 99.9 1.1E-24 3.7E-29 198.7 -0.2 193 5-219 210-420 (494)
40 2vhw_A Alanine dehydrogenase; 99.8 1.5E-21 5.1E-26 173.1 8.3 188 2-219 85-305 (377)
41 2rir_A Dipicolinate synthase, 99.8 3.4E-21 1.2E-25 165.7 8.6 144 2-170 95-250 (300)
42 1gtm_A Glutamate dehydrogenase 99.8 2.2E-22 7.7E-27 180.3 -2.2 131 74-215 206-341 (419)
43 3n58_A Adenosylhomocysteinase; 99.7 2.5E-18 8.6E-23 153.8 6.8 100 74-178 242-347 (464)
44 3h9u_A Adenosylhomocysteinase; 99.7 1.2E-17 4.2E-22 149.3 8.3 102 74-179 206-312 (436)
45 1x13_A NAD(P) transhydrogenase 99.7 3.3E-18 1.1E-22 152.8 4.0 170 2-173 90-301 (401)
46 2eez_A Alanine dehydrogenase; 99.7 1.5E-17 5.2E-22 146.8 6.9 190 2-218 83-309 (369)
47 3gvp_A Adenosylhomocysteinase 99.7 1.1E-16 3.7E-21 143.0 7.0 98 75-177 216-319 (435)
48 4gbj_A 6-phosphogluconate dehy 99.6 4.7E-15 1.6E-19 127.4 10.9 112 79-192 5-121 (297)
49 3obb_A Probable 3-hydroxyisobu 99.6 1.7E-15 5.8E-20 130.3 7.0 111 80-192 4-121 (300)
50 1gpj_A Glutamyl-tRNA reductase 99.5 5.4E-17 1.8E-21 145.0 -5.3 184 3-220 79-294 (404)
51 1l7d_A Nicotinamide nucleotide 99.5 1.5E-14 5.2E-19 128.3 9.4 166 4-172 92-302 (384)
52 3qsg_A NAD-binding phosphogluc 99.5 3.5E-14 1.2E-18 122.5 9.6 137 57-197 2-150 (312)
53 4dll_A 2-hydroxy-3-oxopropiona 99.5 3.3E-14 1.1E-18 123.0 8.6 114 77-192 29-148 (320)
54 3l6d_A Putative oxidoreductase 99.5 1.7E-14 5.7E-19 124.2 6.6 115 76-192 6-125 (306)
55 3doj_A AT3G25530, dehydrogenas 99.5 5.8E-14 2E-18 120.9 9.4 116 74-191 16-138 (310)
56 3qha_A Putative oxidoreductase 99.5 7.5E-14 2.6E-18 119.4 8.4 109 79-191 15-128 (296)
57 3pef_A 6-phosphogluconate dehy 99.5 9.8E-14 3.4E-18 117.9 7.9 110 80-191 2-118 (287)
58 4e21_A 6-phosphogluconate dehy 99.5 1.2E-13 4.3E-18 121.4 8.4 117 77-195 20-144 (358)
59 3g0o_A 3-hydroxyisobutyrate de 99.4 1.8E-13 6E-18 117.4 7.6 111 79-191 7-125 (303)
60 3pdu_A 3-hydroxyisobutyrate de 99.4 1.5E-13 5.2E-18 116.8 7.2 111 80-192 2-119 (287)
61 4ezb_A Uncharacterized conserv 99.4 4.6E-13 1.6E-17 115.8 9.5 115 79-197 24-152 (317)
62 2h78_A Hibadh, 3-hydroxyisobut 99.4 3.8E-13 1.3E-17 114.9 7.4 110 80-191 4-120 (302)
63 2g5c_A Prephenate dehydrogenas 99.4 1.6E-12 5.3E-17 109.9 11.0 134 80-217 2-149 (281)
64 3ggo_A Prephenate dehydrogenas 99.4 1.6E-12 5.4E-17 112.4 11.1 137 76-216 30-180 (314)
65 1c1d_A L-phenylalanine dehydro 99.4 1.9E-12 6.3E-17 113.5 11.1 103 76-186 172-280 (355)
66 2pv7_A T-protein [includes: ch 99.3 5.1E-12 1.8E-16 108.2 10.8 136 55-215 4-142 (298)
67 4gwg_A 6-phosphogluconate dehy 99.3 8.6E-13 2.9E-17 120.2 6.0 115 79-194 4-131 (484)
68 4e12_A Diketoreductase; oxidor 99.3 6.1E-12 2.1E-16 106.8 9.0 126 80-215 5-160 (283)
69 3b1f_A Putative prephenate deh 99.3 3.3E-12 1.1E-16 108.4 6.9 136 79-218 6-158 (290)
70 2zyd_A 6-phosphogluconate dehy 99.3 4.8E-12 1.7E-16 115.3 8.0 109 77-186 13-133 (480)
71 1vpd_A Tartronate semialdehyde 99.3 5.5E-12 1.9E-16 107.3 6.9 107 80-186 6-119 (299)
72 1yb4_A Tartronic semialdehyde 99.3 9.3E-12 3.2E-16 105.6 8.2 106 80-186 4-116 (295)
73 3cky_A 2-hydroxymethyl glutara 99.2 7.5E-12 2.6E-16 106.5 6.9 108 79-186 4-118 (301)
74 3p2y_A Alanine dehydrogenase/p 99.2 1.2E-11 4.1E-16 109.2 8.1 96 76-172 181-310 (381)
75 3dtt_A NADP oxidoreductase; st 99.2 5E-12 1.7E-16 105.2 5.3 92 73-167 13-125 (245)
76 4dio_A NAD(P) transhydrogenase 99.2 1.8E-11 6.2E-16 108.8 8.7 97 76-173 187-321 (405)
77 2p4q_A 6-phosphogluconate dehy 99.2 2.8E-11 9.7E-16 110.6 9.6 107 79-186 10-129 (497)
78 2gf2_A Hibadh, 3-hydroxyisobut 99.2 1.2E-11 4.3E-16 104.9 6.5 104 80-183 1-111 (296)
79 2cvz_A Dehydrogenase, 3-hydrox 99.2 1.5E-11 5.3E-16 103.8 6.7 108 80-192 2-114 (289)
80 2uyy_A N-PAC protein; long-cha 99.2 2.2E-11 7.6E-16 104.5 7.5 107 80-186 31-144 (316)
81 2d5c_A AROE, shikimate 5-dehyd 99.2 1E-11 3.5E-16 104.3 3.8 103 76-186 114-224 (263)
82 3ktd_A Prephenate dehydrogenas 99.2 1.6E-11 5.3E-16 107.3 4.8 130 79-215 8-153 (341)
83 2iz1_A 6-phosphogluconate dehy 99.2 3.1E-11 1E-15 109.8 6.8 107 80-187 6-124 (474)
84 2pgd_A 6-phosphogluconate dehy 99.2 5.8E-11 2E-15 108.1 8.4 108 80-188 3-123 (482)
85 3ond_A Adenosylhomocysteinase; 99.1 6.3E-11 2.2E-15 107.4 7.9 91 75-169 261-355 (488)
86 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.1 4.1E-11 1.4E-15 109.0 6.4 107 80-187 2-124 (478)
87 1np3_A Ketol-acid reductoisome 99.1 7.8E-11 2.7E-15 102.6 6.6 131 75-216 12-155 (338)
88 2f1k_A Prephenate dehydrogenas 99.1 3.4E-10 1.2E-14 95.3 10.2 131 80-216 1-142 (279)
89 2raf_A Putative dinucleotide-b 99.1 2.9E-10 1E-14 92.4 9.0 80 75-170 15-94 (209)
90 3fr7_A Putative ketol-acid red 99.1 6.1E-11 2.1E-15 107.2 5.3 93 74-169 48-157 (525)
91 2yjz_A Metalloreductase steap4 98.7 9.5E-12 3.3E-16 100.9 0.0 90 77-171 17-110 (201)
92 1i36_A Conserved hypothetical 99.1 9.4E-11 3.2E-15 98.0 6.0 98 80-183 1-105 (264)
93 2q3e_A UDP-glucose 6-dehydroge 99.1 8E-11 2.7E-15 106.8 4.8 130 80-211 6-181 (467)
94 3d1l_A Putative NADP oxidoredu 99.1 1.2E-10 4E-15 97.5 5.3 97 75-173 6-109 (266)
95 1leh_A Leucine dehydrogenase; 99.0 2.4E-10 8.2E-15 100.5 6.8 103 76-186 170-279 (364)
96 2hk9_A Shikimate dehydrogenase 99.0 3.6E-10 1.2E-14 95.6 7.2 105 75-186 125-237 (275)
97 2dpo_A L-gulonate 3-dehydrogen 99.0 3.5E-10 1.2E-14 97.9 5.3 113 79-194 6-148 (319)
98 1zej_A HBD-9, 3-hydroxyacyl-CO 99.0 6.5E-10 2.2E-14 95.1 6.6 110 77-194 10-132 (293)
99 3k6j_A Protein F01G10.3, confi 99.0 1.3E-09 4.5E-14 98.5 8.9 152 30-194 11-191 (460)
100 3pid_A UDP-glucose 6-dehydroge 99.0 9E-10 3.1E-14 98.9 7.3 110 73-185 30-172 (432)
101 3oj0_A Glutr, glutamyl-tRNA re 98.9 5.8E-10 2E-14 85.0 4.8 97 79-181 21-132 (144)
102 1y81_A Conserved hypothetical 98.9 3.4E-09 1.2E-13 80.9 8.4 103 77-186 12-118 (138)
103 2izz_A Pyrroline-5-carboxylate 98.9 2.9E-09 9.8E-14 91.9 8.5 102 77-182 20-132 (322)
104 3c24_A Putative oxidoreductase 98.9 1.1E-09 3.8E-14 92.7 5.3 87 80-169 12-104 (286)
105 3gt0_A Pyrroline-5-carboxylate 98.9 9.7E-10 3.3E-14 91.2 4.8 99 80-182 3-111 (247)
106 2vns_A Metalloreductase steap3 98.9 1E-09 3.4E-14 89.5 4.5 90 78-172 27-121 (215)
107 2ahr_A Putative pyrroline carb 98.9 3E-09 1E-13 88.5 7.5 96 80-183 4-105 (259)
108 2rcy_A Pyrroline carboxylate r 98.9 5.1E-09 1.7E-13 87.2 8.7 99 79-183 4-106 (262)
109 3gg2_A Sugar dehydrogenase, UD 98.9 6.9E-09 2.4E-13 93.7 9.7 102 80-182 3-138 (450)
110 2i99_A MU-crystallin homolog; 98.9 1.4E-09 4.8E-14 93.7 4.9 106 78-192 134-249 (312)
111 4a7p_A UDP-glucose dehydrogena 98.8 2.3E-08 7.9E-13 90.2 12.1 104 79-183 8-146 (446)
112 1f0y_A HCDH, L-3-hydroxyacyl-C 98.8 4.7E-09 1.6E-13 89.6 7.1 112 80-194 16-161 (302)
113 1mv8_A GMD, GDP-mannose 6-dehy 98.8 7.9E-09 2.7E-13 92.8 8.3 102 80-182 1-140 (436)
114 3tri_A Pyrroline-5-carboxylate 98.8 4.9E-09 1.7E-13 88.9 6.3 100 79-182 3-112 (280)
115 1yqg_A Pyrroline-5-carboxylate 98.8 4.1E-09 1.4E-13 87.8 5.3 96 80-183 1-103 (263)
116 2dc1_A L-aspartate dehydrogena 98.8 3.2E-08 1.1E-12 81.5 10.2 99 80-186 1-104 (236)
117 2duw_A Putative COA-binding pr 98.8 8E-09 2.7E-13 79.4 5.8 101 79-186 13-119 (145)
118 1bg6_A N-(1-D-carboxylethyl)-L 98.8 1.6E-08 5.3E-13 87.7 7.9 100 80-182 5-124 (359)
119 1ks9_A KPA reductase;, 2-dehyd 98.7 2E-08 7E-13 84.3 8.1 88 80-169 1-100 (291)
120 1jay_A Coenzyme F420H2:NADP+ o 98.7 9.7E-09 3.3E-13 82.8 5.5 112 80-198 1-137 (212)
121 1x0v_A GPD-C, GPDH-C, glycerol 98.7 3.1E-08 1E-12 86.0 8.2 90 79-170 8-128 (354)
122 3k96_A Glycerol-3-phosphate de 98.7 9.2E-09 3.1E-13 90.2 4.6 92 79-172 29-139 (356)
123 1txg_A Glycerol-3-phosphate de 98.7 2.1E-08 7.3E-13 86.1 6.4 100 80-182 1-124 (335)
124 4huj_A Uncharacterized protein 98.7 2.4E-08 8.2E-13 81.5 6.1 87 79-169 23-116 (220)
125 2y0c_A BCEC, UDP-glucose dehyd 98.7 3.9E-08 1.3E-12 89.4 8.1 103 79-182 8-144 (478)
126 1yj8_A Glycerol-3-phosphate de 98.7 2.2E-08 7.4E-13 88.0 6.1 88 80-169 22-144 (375)
127 3mog_A Probable 3-hydroxybutyr 98.7 1.1E-08 3.6E-13 93.3 3.9 114 79-197 5-148 (483)
128 3p2o_A Bifunctional protein fo 98.6 9.1E-08 3.1E-12 81.1 9.1 80 75-170 156-236 (285)
129 2ew2_A 2-dehydropantoate 2-red 98.6 2.4E-08 8.1E-13 84.8 5.4 104 80-186 4-127 (316)
130 4a26_A Putative C-1-tetrahydro 98.6 7.8E-08 2.7E-12 82.1 8.5 80 75-170 161-243 (300)
131 3l07_A Bifunctional protein fo 98.6 1.1E-07 3.7E-12 80.6 9.4 79 75-169 157-236 (285)
132 3don_A Shikimate dehydrogenase 98.6 5.3E-08 1.8E-12 82.6 7.4 107 75-186 113-228 (277)
133 3g79_A NDP-N-acetyl-D-galactos 98.6 8.9E-08 3E-12 87.0 9.2 100 79-178 18-159 (478)
134 1dlj_A UDP-glucose dehydrogena 98.6 4.5E-08 1.5E-12 87.1 7.0 101 80-183 1-134 (402)
135 3ngx_A Bifunctional protein fo 98.6 8.6E-08 2.9E-12 80.8 8.2 77 77-169 148-225 (276)
136 2c2x_A Methylenetetrahydrofola 98.6 1.1E-07 3.7E-12 80.4 8.8 81 75-171 154-237 (281)
137 1b0a_A Protein (fold bifunctio 98.6 7.7E-08 2.6E-12 81.6 7.8 80 75-170 155-235 (288)
138 4a5o_A Bifunctional protein fo 98.6 1.5E-07 5.1E-12 79.7 9.6 79 75-169 157-236 (286)
139 1evy_A Glycerol-3-phosphate de 98.6 8.1E-09 2.8E-13 90.3 1.9 90 81-171 17-129 (366)
140 1pjc_A Protein (L-alanine dehy 98.6 3.1E-08 1.1E-12 86.8 5.4 92 76-167 164-268 (361)
141 1z82_A Glycerol-3-phosphate de 98.6 4.2E-08 1.4E-12 84.8 5.9 84 79-169 14-114 (335)
142 1a4i_A Methylenetetrahydrofola 98.6 2.1E-07 7.2E-12 79.4 9.9 82 74-171 160-242 (301)
143 2o3j_A UDP-glucose 6-dehydroge 98.6 5.2E-08 1.8E-12 88.6 6.6 102 80-182 10-151 (481)
144 3dfu_A Uncharacterized protein 98.6 5.3E-08 1.8E-12 80.5 5.8 70 79-166 6-75 (232)
145 1edz_A 5,10-methylenetetrahydr 98.6 1.2E-07 4E-12 81.9 8.0 90 74-169 172-278 (320)
146 2egg_A AROE, shikimate 5-dehyd 98.6 1.2E-07 4.1E-12 81.0 7.9 106 76-186 138-258 (297)
147 1zcj_A Peroxisomal bifunctiona 98.6 5.3E-08 1.8E-12 88.2 5.5 111 79-193 37-174 (463)
148 3u62_A Shikimate dehydrogenase 98.6 1.1E-07 3.6E-12 79.7 6.9 100 76-183 106-214 (253)
149 3ojo_A CAP5O; rossmann fold, c 98.5 1.1E-07 3.9E-12 85.2 7.3 105 77-181 9-144 (431)
150 3phh_A Shikimate dehydrogenase 98.5 1.7E-07 5.9E-12 79.1 6.7 104 79-186 118-226 (269)
151 1wdk_A Fatty oxidation complex 98.4 7.5E-08 2.6E-12 91.6 3.6 112 79-194 314-454 (715)
152 2wtb_A MFP2, fatty acid multif 98.4 1.9E-07 6.7E-12 88.8 4.5 111 80-194 313-452 (725)
153 1iuk_A Hypothetical protein TT 98.4 1.7E-06 5.7E-11 65.9 8.9 102 78-186 12-119 (140)
154 3ulk_A Ketol-acid reductoisome 98.4 4.3E-07 1.5E-11 81.0 6.0 91 75-169 33-134 (491)
155 2i76_A Hypothetical protein; N 98.4 4.1E-08 1.4E-12 82.7 -0.6 83 80-170 3-93 (276)
156 2qyt_A 2-dehydropantoate 2-red 98.3 1.6E-07 5.4E-12 79.9 2.9 101 80-184 9-134 (317)
157 2d59_A Hypothetical protein PH 98.3 2.5E-06 8.4E-11 65.2 9.3 101 79-186 22-126 (144)
158 2g1u_A Hypothetical protein TM 98.3 2.2E-06 7.7E-11 65.7 9.0 95 74-170 14-122 (155)
159 3c85_A Putative glutathione-re 98.3 2.9E-07 9.9E-12 72.5 4.0 90 75-166 35-139 (183)
160 3i83_A 2-dehydropantoate 2-red 98.3 4.6E-06 1.6E-10 71.5 10.9 104 80-186 3-124 (320)
161 3ghy_A Ketopantoate reductase 98.3 5.6E-07 1.9E-11 77.8 5.0 105 79-186 3-142 (335)
162 3hwr_A 2-dehydropantoate 2-red 98.3 7E-07 2.4E-11 76.8 5.5 101 76-181 16-134 (318)
163 2z2v_A Hypothetical protein PH 98.3 5.7E-07 1.9E-11 79.0 4.6 103 77-186 14-127 (365)
164 3hdj_A Probable ornithine cycl 98.2 3.6E-06 1.2E-10 72.4 9.0 82 79-168 121-215 (313)
165 1lss_A TRK system potassium up 98.2 2E-06 6.7E-11 63.9 6.4 85 79-165 4-102 (140)
166 3hn2_A 2-dehydropantoate 2-red 98.2 5.2E-06 1.8E-10 70.9 9.5 105 80-188 3-124 (312)
167 1vl6_A Malate oxidoreductase; 98.2 7.8E-06 2.7E-10 72.0 10.6 92 74-170 187-298 (388)
168 2qrj_A Saccharopine dehydrogen 98.2 1.3E-06 4.3E-11 77.3 5.4 83 78-166 213-300 (394)
169 1x7d_A Ornithine cyclodeaminas 98.2 2.9E-06 1E-10 74.1 7.6 87 78-168 128-228 (350)
170 3ic5_A Putative saccharopine d 98.2 1.6E-06 5.4E-11 62.5 5.0 84 78-166 4-100 (118)
171 3fwz_A Inner membrane protein 98.2 1E-06 3.6E-11 66.5 4.1 85 79-165 7-104 (140)
172 3o8q_A Shikimate 5-dehydrogena 98.1 2E-06 7E-11 72.9 5.4 105 74-183 121-236 (281)
173 1p77_A Shikimate 5-dehydrogena 98.1 1.7E-06 5.9E-11 72.8 4.4 106 75-183 115-231 (272)
174 3c7a_A Octopine dehydrogenase; 98.1 1.9E-06 6.5E-11 76.1 4.5 84 80-165 3-115 (404)
175 2hmt_A YUAA protein; RCK, KTN, 98.1 3E-06 1E-10 63.1 4.7 91 77-169 4-107 (144)
176 4b4u_A Bifunctional protein fo 98.1 1.3E-05 4.5E-10 68.2 9.2 79 74-168 174-253 (303)
177 3ado_A Lambda-crystallin; L-gu 98.1 4.2E-06 1.4E-10 72.2 6.1 114 79-195 6-149 (319)
178 3g17_A Similar to 2-dehydropan 98.1 1.2E-06 4E-11 74.4 2.5 91 80-172 3-102 (294)
179 1nyt_A Shikimate 5-dehydrogena 98.1 6E-06 2E-10 69.4 6.8 103 76-183 116-229 (271)
180 4fgw_A Glycerol-3-phosphate de 98.1 6.7E-06 2.3E-10 72.8 7.4 88 80-169 35-154 (391)
181 1omo_A Alanine dehydrogenase; 98.1 9.5E-06 3.2E-10 70.0 8.0 83 78-168 124-219 (322)
182 2ewd_A Lactate dehydrogenase,; 98.1 5E-06 1.7E-10 71.3 6.0 101 79-180 4-135 (317)
183 3pwz_A Shikimate dehydrogenase 98.0 8.7E-06 3E-10 68.7 7.1 106 74-183 115-231 (272)
184 3vtf_A UDP-glucose 6-dehydroge 98.0 5.3E-06 1.8E-10 74.5 6.0 132 78-211 20-194 (444)
185 3llv_A Exopolyphosphatase-rela 98.0 4.2E-06 1.4E-10 62.8 3.8 85 78-164 5-102 (141)
186 1j5p_A Aspartate dehydrogenase 98.0 3.1E-05 1.1E-09 64.5 8.9 100 78-186 11-114 (253)
187 3qy9_A DHPR, dihydrodipicolina 97.9 3.9E-05 1.3E-09 63.6 9.0 80 80-168 4-85 (243)
188 1hyh_A L-hicdh, L-2-hydroxyiso 97.9 1.2E-05 4E-10 68.7 5.9 61 80-141 2-80 (309)
189 3fbt_A Chorismate mutase and s 97.9 1.7E-05 5.8E-10 67.3 6.7 104 75-185 118-231 (282)
190 3uuw_A Putative oxidoreductase 97.9 1.5E-05 5.3E-10 67.7 6.3 103 79-186 6-119 (308)
191 1tlt_A Putative oxidoreductase 97.9 3.7E-05 1.3E-09 65.6 8.5 103 79-186 5-118 (319)
192 3jyo_A Quinate/shikimate dehyd 97.9 2.5E-05 8.6E-10 66.2 7.3 105 75-183 123-245 (283)
193 2a9f_A Putative malic enzyme ( 97.9 9.7E-05 3.3E-09 65.2 10.9 92 74-170 183-293 (398)
194 3tnl_A Shikimate dehydrogenase 97.9 2.9E-05 1E-09 66.8 7.4 108 74-185 149-280 (315)
195 4hkt_A Inositol 2-dehydrogenas 97.9 2.3E-05 7.9E-10 67.3 6.8 62 80-142 4-75 (331)
196 3euw_A MYO-inositol dehydrogen 97.8 3.4E-05 1.2E-09 66.5 7.7 63 80-142 5-77 (344)
197 2dvm_A Malic enzyme, 439AA lon 97.8 4.8E-05 1.7E-09 68.2 8.7 106 74-184 181-312 (439)
198 1id1_A Putative potassium chan 97.8 5.2E-05 1.8E-09 57.7 7.8 87 79-167 3-106 (153)
199 1a5z_A L-lactate dehydrogenase 97.8 1.9E-05 6.4E-10 67.9 5.7 107 80-188 1-140 (319)
200 3c1a_A Putative oxidoreductase 97.8 1.8E-05 6.1E-10 67.5 5.5 102 80-186 11-122 (315)
201 3ego_A Probable 2-dehydropanto 97.8 1.8E-05 6.2E-10 67.6 5.5 102 79-186 2-118 (307)
202 1nvt_A Shikimate 5'-dehydrogen 97.8 8.2E-06 2.8E-10 69.1 3.1 104 76-185 125-247 (287)
203 1pzg_A LDH, lactate dehydrogen 97.8 4.2E-05 1.4E-09 66.2 7.7 90 79-168 9-134 (331)
204 1f06_A MESO-diaminopimelate D- 97.8 7.4E-05 2.5E-09 64.2 9.0 100 80-184 4-110 (320)
205 3db2_A Putative NADPH-dependen 97.8 3.5E-05 1.2E-09 66.7 7.1 64 80-143 6-79 (354)
206 3q2i_A Dehydrogenase; rossmann 97.8 2.4E-05 8.3E-10 67.8 5.9 63 79-141 13-86 (354)
207 2ho3_A Oxidoreductase, GFO/IDH 97.8 3.3E-05 1.1E-09 66.1 6.5 62 80-141 2-73 (325)
208 3evn_A Oxidoreductase, GFO/IDH 97.8 8.1E-05 2.8E-09 63.9 9.0 63 79-141 5-78 (329)
209 2nu8_A Succinyl-COA ligase [AD 97.8 9E-05 3.1E-09 62.9 9.0 104 79-186 7-117 (288)
210 2glx_A 1,5-anhydro-D-fructose 97.8 2.7E-05 9.2E-10 66.7 5.8 62 80-141 1-73 (332)
211 3bio_A Oxidoreductase, GFO/IDH 97.8 7.3E-05 2.5E-09 63.8 8.1 101 79-185 9-118 (304)
212 3e9m_A Oxidoreductase, GFO/IDH 97.7 4E-05 1.4E-09 65.9 6.3 64 79-142 5-79 (330)
213 1guz_A Malate dehydrogenase; o 97.7 6.6E-05 2.2E-09 64.2 7.3 60 80-140 1-79 (310)
214 3l4b_C TRKA K+ channel protien 97.7 3E-05 1E-09 62.6 4.7 84 80-165 1-98 (218)
215 2v6b_A L-LDH, L-lactate dehydr 97.7 3.9E-05 1.3E-09 65.5 5.5 108 80-188 1-138 (304)
216 3t4e_A Quinate/shikimate dehyd 97.7 0.0001 3.5E-09 63.3 7.9 106 74-183 143-273 (312)
217 3cea_A MYO-inositol 2-dehydrog 97.7 5.3E-05 1.8E-09 65.2 6.1 103 79-186 8-125 (346)
218 2hjr_A Malate dehydrogenase; m 97.7 9.2E-05 3.1E-09 63.9 7.6 88 79-167 14-132 (328)
219 3rc1_A Sugar 3-ketoreductase; 97.7 4.3E-05 1.5E-09 66.3 5.4 65 77-141 25-100 (350)
220 1xea_A Oxidoreductase, GFO/IDH 97.7 6.1E-05 2.1E-09 64.4 6.3 102 80-186 3-116 (323)
221 3ezy_A Dehydrogenase; structur 97.7 8.7E-05 3E-09 64.0 7.3 62 80-141 3-75 (344)
222 1jw9_B Molybdopterin biosynthe 97.6 1.9E-05 6.4E-10 65.6 2.6 94 56-154 12-144 (249)
223 1oi7_A Succinyl-COA synthetase 97.6 0.00022 7.7E-09 60.4 9.2 104 79-186 7-117 (288)
224 3ff4_A Uncharacterized protein 97.6 0.00011 3.8E-09 54.5 6.4 99 80-186 5-107 (122)
225 3q2o_A Phosphoribosylaminoimid 97.6 0.0001 3.5E-09 64.6 7.0 62 76-137 11-82 (389)
226 1t2d_A LDH-P, L-lactate dehydr 97.6 0.00015 5E-09 62.5 7.9 59 79-138 4-80 (322)
227 2p2s_A Putative oxidoreductase 97.6 0.0002 7E-09 61.4 8.6 63 79-141 4-77 (336)
228 1lld_A L-lactate dehydrogenase 97.6 9.7E-05 3.3E-09 62.9 6.0 93 78-170 6-128 (319)
229 3l9w_A Glutathione-regulated p 97.6 4.6E-05 1.6E-09 67.9 4.1 84 79-164 4-100 (413)
230 3abi_A Putative uncharacterize 97.5 6.6E-05 2.3E-09 65.5 4.9 63 78-141 15-88 (365)
231 1npy_A Hypothetical shikimate 97.5 0.00025 8.7E-09 59.6 8.3 102 78-186 118-231 (271)
232 3e82_A Putative oxidoreductase 97.5 0.00016 5.6E-09 62.9 7.2 62 80-141 8-78 (364)
233 2fp4_A Succinyl-COA ligase [GD 97.5 0.00029 1E-08 60.2 8.5 107 76-186 10-125 (305)
234 4f2g_A Otcase 1, ornithine car 97.5 0.00078 2.7E-08 57.7 10.9 99 76-174 151-275 (309)
235 3dfz_A SIRC, precorrin-2 dehyd 97.5 9.2E-05 3.2E-09 60.6 4.5 90 71-166 23-121 (223)
236 3e18_A Oxidoreductase; dehydro 97.5 7.9E-05 2.7E-09 64.8 4.3 63 79-141 5-76 (359)
237 1ydw_A AX110P-like protein; st 97.5 0.0002 6.7E-09 62.2 6.8 102 80-186 7-124 (362)
238 2vt3_A REX, redox-sensing tran 97.5 0.00013 4.3E-09 59.4 5.1 62 79-140 85-155 (215)
239 4ep1_A Otcase, ornithine carba 97.4 0.0011 3.6E-08 57.5 11.1 98 77-174 177-305 (340)
240 3f4l_A Putative oxidoreductase 97.4 0.00018 6.1E-09 62.1 6.2 63 80-142 3-77 (345)
241 3tum_A Shikimate dehydrogenase 97.4 0.00025 8.6E-09 59.6 6.9 109 74-183 120-241 (269)
242 2ef0_A Ornithine carbamoyltran 97.4 0.0013 4.4E-08 56.1 11.3 100 76-175 151-273 (301)
243 4fcc_A Glutamate dehydrogenase 97.4 0.00062 2.1E-08 61.0 9.5 105 75-186 231-368 (450)
244 1y6j_A L-lactate dehydrogenase 97.4 0.00058 2E-08 58.6 9.0 109 79-188 7-147 (318)
245 3qvo_A NMRA family protein; st 97.4 0.00027 9.3E-09 57.3 6.6 92 77-170 21-128 (236)
246 3zwc_A Peroxisomal bifunctiona 97.4 0.00023 8E-09 67.8 6.9 114 79-195 316-455 (742)
247 3r6d_A NAD-dependent epimerase 97.4 0.00051 1.8E-08 54.9 7.9 88 79-170 5-111 (221)
248 3kux_A Putative oxidoreductase 97.4 0.00049 1.7E-08 59.5 8.1 64 79-142 7-79 (352)
249 3nep_X Malate dehydrogenase; h 97.4 0.00039 1.3E-08 59.7 7.3 88 80-167 1-119 (314)
250 3fef_A Putative glucosidase LP 97.4 0.00017 5.7E-09 65.0 5.2 101 78-179 4-159 (450)
251 3orq_A N5-carboxyaminoimidazol 97.4 0.00026 9E-09 61.9 6.3 61 76-136 9-79 (377)
252 3ec7_A Putative dehydrogenase; 97.4 0.00019 6.6E-09 62.3 5.5 65 78-142 22-99 (357)
253 2aef_A Calcium-gated potassium 97.4 0.00015 5E-09 59.0 4.3 82 79-163 9-102 (234)
254 2i6u_A Otcase, ornithine carba 97.4 0.0022 7.6E-08 54.8 11.8 99 76-174 145-276 (307)
255 2axq_A Saccharopine dehydrogen 97.4 0.00014 4.8E-09 65.8 4.6 69 73-141 17-99 (467)
256 3mz0_A Inositol 2-dehydrogenas 97.4 0.00012 3.9E-09 63.2 3.9 63 80-142 3-78 (344)
257 3gd5_A Otcase, ornithine carba 97.3 0.0018 6E-08 55.8 11.0 99 76-174 154-284 (323)
258 2i6t_A Ubiquitin-conjugating e 97.3 0.00045 1.5E-08 59.0 7.3 87 79-167 14-126 (303)
259 1ldn_A L-lactate dehydrogenase 97.3 0.00025 8.6E-09 60.8 5.7 89 79-167 6-124 (316)
260 3k92_A NAD-GDH, NAD-specific g 97.3 0.004 1.4E-07 55.4 13.3 104 75-186 217-343 (424)
261 1ur5_A Malate dehydrogenase; o 97.3 0.001 3.4E-08 56.8 9.0 87 80-167 3-120 (309)
262 1zud_1 Adenylyltransferase THI 97.3 0.00023 8E-09 59.0 4.9 79 75-154 24-141 (251)
263 3aog_A Glutamate dehydrogenase 97.3 0.0049 1.7E-07 55.1 13.7 104 75-186 231-358 (440)
264 1oju_A MDH, malate dehydrogena 97.3 0.00032 1.1E-08 59.6 5.8 92 80-174 1-124 (294)
265 3gvi_A Malate dehydrogenase; N 97.3 0.00073 2.5E-08 58.2 8.1 91 77-168 5-126 (324)
266 3m2t_A Probable dehydrogenase; 97.3 0.00016 5.5E-09 62.8 3.9 62 79-140 5-78 (359)
267 3vku_A L-LDH, L-lactate dehydr 97.3 0.00055 1.9E-08 59.1 7.1 91 77-167 7-126 (326)
268 3tpf_A Otcase, ornithine carba 97.3 0.003 1E-07 54.0 11.6 99 76-174 142-273 (307)
269 1h6d_A Precursor form of gluco 97.3 0.00021 7.1E-09 63.8 4.5 63 79-141 83-161 (433)
270 1pvv_A Otcase, ornithine carba 97.2 0.0033 1.1E-07 53.9 11.8 99 76-174 152-282 (315)
271 3g79_A NDP-N-acetyl-D-galactos 97.2 0.0032 1.1E-07 57.0 12.0 98 75-176 349-458 (478)
272 3r7f_A Aspartate carbamoyltran 97.2 0.0015 5.1E-08 55.8 9.2 91 76-166 144-250 (304)
273 3do5_A HOM, homoserine dehydro 97.2 0.00071 2.4E-08 58.4 7.3 106 80-186 3-136 (327)
274 1ff9_A Saccharopine reductase; 97.2 0.0003 1E-08 63.3 5.0 64 78-141 2-79 (450)
275 3p7m_A Malate dehydrogenase; p 97.2 0.00099 3.4E-08 57.3 8.1 94 78-173 4-127 (321)
276 3o9z_A Lipopolysaccaride biosy 97.2 0.00077 2.6E-08 57.5 7.3 62 80-141 4-83 (312)
277 4ew6_A D-galactose-1-dehydroge 97.2 0.0005 1.7E-08 59.1 6.2 62 78-140 24-91 (330)
278 2tmg_A Protein (glutamate dehy 97.2 0.01 3.5E-07 52.7 14.7 104 75-186 205-333 (415)
279 3fhl_A Putative oxidoreductase 97.2 0.00039 1.3E-08 60.4 5.4 63 79-141 5-76 (362)
280 1pg5_A Aspartate carbamoyltran 97.2 0.0024 8E-08 54.4 10.1 92 76-167 146-261 (299)
281 1vlv_A Otcase, ornithine carba 97.2 0.0031 1.1E-07 54.3 10.8 99 76-174 164-296 (325)
282 3dhn_A NAD-dependent epimerase 97.2 0.00081 2.8E-08 53.7 6.8 62 80-141 5-78 (227)
283 2we8_A Xanthine dehydrogenase; 97.1 0.0026 8.8E-08 56.1 10.3 96 79-189 204-302 (386)
284 4a8t_A Putrescine carbamoyltra 97.1 0.0028 9.5E-08 54.9 10.3 98 76-174 172-303 (339)
285 3ldh_A Lactate dehydrogenase; 97.1 0.00023 7.8E-09 61.6 3.4 89 78-167 20-139 (330)
286 3oa2_A WBPB; oxidoreductase, s 97.1 0.0009 3.1E-08 57.2 7.1 62 80-141 4-84 (318)
287 3pqe_A L-LDH, L-lactate dehydr 97.1 0.00086 3E-08 57.8 6.8 89 79-167 5-123 (326)
288 1lc0_A Biliverdin reductase A; 97.1 0.0017 5.9E-08 54.8 8.6 101 80-185 8-117 (294)
289 3ohs_X Trans-1,2-dihydrobenzen 97.1 0.00029 1E-08 60.4 3.8 62 80-141 3-77 (334)
290 2dt5_A AT-rich DNA-binding pro 97.1 0.00043 1.5E-08 56.1 4.4 62 79-141 80-151 (211)
291 1dxh_A Ornithine carbamoyltran 97.1 0.0024 8.1E-08 55.3 9.3 92 76-167 152-275 (335)
292 3sds_A Ornithine carbamoyltran 97.1 0.0044 1.5E-07 53.9 11.0 93 75-167 184-309 (353)
293 3d0o_A L-LDH 1, L-lactate dehy 97.1 0.00096 3.3E-08 57.2 6.7 111 78-188 5-147 (317)
294 1yqd_A Sinapyl alcohol dehydro 97.1 0.00055 1.9E-08 59.5 5.2 85 78-167 187-283 (366)
295 1obb_A Maltase, alpha-glucosid 97.1 0.0004 1.4E-08 63.0 4.4 109 79-188 3-173 (480)
296 1xyg_A Putative N-acetyl-gamma 97.1 0.0021 7.3E-08 56.1 8.8 83 78-167 15-113 (359)
297 4a8p_A Putrescine carbamoyltra 97.1 0.0032 1.1E-07 54.8 9.9 98 76-174 150-281 (355)
298 2ixa_A Alpha-N-acetylgalactosa 97.0 0.0007 2.4E-08 60.5 5.8 63 79-141 20-102 (444)
299 2nvw_A Galactose/lactose metab 97.0 0.0012 4E-08 59.8 7.3 64 78-141 38-119 (479)
300 1ez4_A Lactate dehydrogenase; 97.0 0.00093 3.2E-08 57.4 6.3 110 79-188 5-145 (318)
301 3gpi_A NAD-dependent epimerase 97.0 0.00097 3.3E-08 55.3 6.3 62 78-139 2-72 (286)
302 1hdo_A Biliverdin IX beta redu 97.0 0.0014 5E-08 51.1 6.8 63 79-141 3-78 (206)
303 2nqt_A N-acetyl-gamma-glutamyl 97.0 0.0027 9.1E-08 55.3 9.1 93 79-177 9-121 (352)
304 3i23_A Oxidoreductase, GFO/IDH 97.0 0.0013 4.5E-08 56.7 7.2 62 80-141 3-76 (349)
305 4fb5_A Probable oxidoreductase 97.0 0.00076 2.6E-08 58.4 5.6 64 78-141 24-105 (393)
306 2yv1_A Succinyl-COA ligase [AD 97.0 0.0011 3.9E-08 56.2 6.5 103 80-186 14-123 (294)
307 3aoe_E Glutamate dehydrogenase 97.0 0.013 4.4E-07 52.1 13.5 104 75-186 214-337 (419)
308 3gdo_A Uncharacterized oxidore 97.0 0.00038 1.3E-08 60.4 3.6 63 80-142 6-77 (358)
309 1ml4_A Aspartate transcarbamoy 97.0 0.0019 6.4E-08 55.3 7.8 92 76-167 152-269 (308)
310 2yfq_A Padgh, NAD-GDH, NAD-spe 97.0 0.0055 1.9E-07 54.5 10.9 104 75-186 208-340 (421)
311 2yv2_A Succinyl-COA synthetase 96.9 0.0019 6.5E-08 54.9 7.4 104 79-186 13-124 (297)
312 3csu_A Protein (aspartate carb 96.9 0.0051 1.8E-07 52.6 10.0 98 76-173 151-275 (310)
313 3e8x_A Putative NAD-dependent 96.9 0.0014 4.8E-08 52.8 6.3 68 74-141 16-95 (236)
314 3dqp_A Oxidoreductase YLBE; al 96.9 0.0013 4.3E-08 52.5 5.9 62 80-141 1-74 (219)
315 2ejw_A HDH, homoserine dehydro 96.9 0.0013 4.5E-08 56.8 6.4 99 80-183 4-116 (332)
316 1duv_G Octase-1, ornithine tra 96.9 0.0024 8.3E-08 55.2 8.0 92 76-167 152-275 (333)
317 3ew7_A LMO0794 protein; Q8Y8U8 96.9 0.0016 5.6E-08 51.4 6.5 89 80-168 1-104 (221)
318 4f3y_A DHPR, dihydrodipicolina 96.9 0.0015 5.2E-08 54.9 6.5 61 79-139 7-82 (272)
319 2zqz_A L-LDH, L-lactate dehydr 96.9 0.0012 4E-08 56.9 6.0 110 79-188 9-149 (326)
320 2ozp_A N-acetyl-gamma-glutamyl 96.9 0.0027 9.3E-08 55.0 8.3 82 80-167 5-100 (345)
321 3two_A Mannitol dehydrogenase; 96.9 0.0013 4.6E-08 56.5 6.3 85 78-167 176-266 (348)
322 3tl2_A Malate dehydrogenase; c 96.9 0.0014 4.9E-08 56.2 6.3 90 78-167 7-128 (315)
323 2bka_A CC3, TAT-interacting pr 96.9 0.003 1E-07 50.8 7.9 65 77-141 16-95 (242)
324 1u8x_X Maltose-6'-phosphate gl 96.9 0.00067 2.3E-08 61.4 4.3 110 79-188 28-193 (472)
325 2rir_A Dipicolinate synthase, 96.9 0.005 1.7E-07 52.0 9.5 105 77-186 5-121 (300)
326 4amu_A Ornithine carbamoyltran 96.9 0.0044 1.5E-07 54.1 9.2 91 77-167 178-301 (365)
327 4had_A Probable oxidoreductase 96.9 0.00071 2.4E-08 58.2 4.2 62 80-141 24-97 (350)
328 4e4t_A Phosphoribosylaminoimid 96.8 0.0011 3.8E-08 58.8 5.2 61 76-136 32-102 (419)
329 3btv_A Galactose/lactose metab 96.8 0.00076 2.6E-08 60.2 4.0 63 79-141 20-100 (438)
330 4a7p_A UDP-glucose dehydrogena 96.8 0.003 1E-07 56.7 7.9 97 75-176 318-430 (446)
331 1oth_A Protein (ornithine tran 96.8 0.005 1.7E-07 52.9 8.8 92 76-167 152-272 (321)
332 3r3j_A Glutamate dehydrogenase 96.8 0.01 3.5E-07 53.2 11.0 105 75-186 235-373 (456)
333 3ijp_A DHPR, dihydrodipicolina 96.8 0.0037 1.2E-07 53.0 7.8 84 80-168 22-121 (288)
334 3grf_A Ornithine carbamoyltran 96.8 0.0063 2.2E-07 52.4 9.3 99 76-174 158-294 (328)
335 2d4a_B Malate dehydrogenase; a 96.8 0.0022 7.6E-08 54.7 6.4 86 81-167 1-117 (308)
336 1v9l_A Glutamate dehydrogenase 96.8 0.0088 3E-07 53.2 10.4 104 75-186 206-339 (421)
337 1lu9_A Methylene tetrahydromet 96.8 0.00083 2.8E-08 56.5 3.6 39 75-113 115-154 (287)
338 3ojo_A CAP5O; rossmann fold, c 96.8 0.0082 2.8E-07 53.6 10.3 88 76-170 312-410 (431)
339 2pzm_A Putative nucleotide sug 96.8 0.0029 1E-07 53.6 7.1 67 74-140 15-98 (330)
340 2czc_A Glyceraldehyde-3-phosph 96.7 0.0017 5.9E-08 56.0 5.5 63 80-142 3-91 (334)
341 3keo_A Redox-sensing transcrip 96.7 0.0016 5.4E-08 52.8 4.9 63 79-141 84-159 (212)
342 3i6i_A Putative leucoanthocyan 96.7 0.0056 1.9E-07 52.2 8.6 36 77-112 8-44 (346)
343 2cdc_A Glucose dehydrogenase g 96.7 0.00097 3.3E-08 57.8 3.8 88 76-167 178-279 (366)
344 3on5_A BH1974 protein; structu 96.7 0.0036 1.2E-07 54.7 7.4 92 79-189 199-292 (362)
345 1piw_A Hypothetical zinc-type 96.7 0.0016 5.6E-08 56.3 5.3 87 78-167 179-277 (360)
346 3rui_A Ubiquitin-like modifier 96.7 0.0037 1.3E-07 54.2 7.4 65 33-111 2-67 (340)
347 3h2s_A Putative NADH-flavin re 96.7 0.0028 9.6E-08 50.3 6.3 89 80-168 1-106 (224)
348 3moi_A Probable dehydrogenase; 96.7 0.00065 2.2E-08 59.6 2.6 62 80-141 3-75 (387)
349 2xxj_A L-LDH, L-lactate dehydr 96.7 0.0018 6.2E-08 55.3 5.3 88 80-167 1-117 (310)
350 1ys4_A Aspartate-semialdehyde 96.7 0.0022 7.4E-08 55.8 5.9 83 80-167 9-115 (354)
351 3c8m_A Homoserine dehydrogenas 96.7 0.0019 6.5E-08 55.7 5.4 106 80-186 7-142 (331)
352 2w37_A Ornithine carbamoyltran 96.7 0.0043 1.5E-07 54.0 7.6 92 76-167 173-296 (359)
353 4gqa_A NAD binding oxidoreduct 96.7 0.00081 2.8E-08 59.3 3.1 62 80-141 27-107 (412)
354 4id9_A Short-chain dehydrogena 96.7 0.0025 8.5E-08 54.1 6.1 67 74-140 14-87 (347)
355 3lk7_A UDP-N-acetylmuramoylala 96.7 0.002 6.8E-08 57.7 5.5 110 76-185 6-139 (451)
356 1zh8_A Oxidoreductase; TM0312, 96.6 0.0011 3.8E-08 57.1 3.5 63 79-141 18-93 (340)
357 1b7g_O Protein (glyceraldehyde 96.6 0.0031 1.1E-07 54.6 6.4 62 80-141 2-88 (340)
358 1uuf_A YAHK, zinc-type alcohol 96.6 0.0018 6.3E-08 56.3 4.9 85 78-167 194-289 (369)
359 1kyq_A Met8P, siroheme biosynt 96.6 0.00085 2.9E-08 56.5 2.6 41 72-112 6-46 (274)
360 1cf2_P Protein (glyceraldehyde 96.6 0.00068 2.3E-08 58.7 2.0 62 80-141 2-89 (337)
361 2bma_A Glutamate dehydrogenase 96.6 0.019 6.7E-07 51.6 11.5 106 74-186 247-386 (470)
362 3u3x_A Oxidoreductase; structu 96.6 0.0017 5.8E-08 56.4 4.5 64 78-141 25-99 (361)
363 4aj2_A L-lactate dehydrogenase 96.6 0.0022 7.7E-08 55.3 5.0 91 76-167 16-137 (331)
364 1dih_A Dihydrodipicolinate red 96.6 0.0016 5.6E-08 54.6 4.0 60 79-138 5-80 (273)
365 4ina_A Saccharopine dehydrogen 96.5 0.0014 4.7E-08 58.1 3.5 61 80-140 2-86 (405)
366 3dty_A Oxidoreductase, GFO/IDH 96.5 0.0011 3.9E-08 58.2 2.9 64 78-141 11-96 (398)
367 1mld_A Malate dehydrogenase; o 96.5 0.012 4.1E-07 50.2 9.2 94 80-175 1-124 (314)
368 1s6y_A 6-phospho-beta-glucosid 96.5 0.006 2E-07 54.8 7.6 109 79-187 7-173 (450)
369 1xgk_A Nitrogen metabolite rep 96.5 0.0021 7.2E-08 55.5 4.5 92 78-169 4-115 (352)
370 1pjq_A CYSG, siroheme synthase 96.5 0.0019 6.4E-08 58.1 4.3 41 72-112 5-45 (457)
371 2gas_A Isoflavone reductase; N 96.5 0.0074 2.5E-07 50.2 7.7 34 79-112 2-36 (307)
372 1cdo_A Alcohol dehydrogenase; 96.5 0.007 2.4E-07 52.5 7.8 85 78-167 192-295 (374)
373 3ijr_A Oxidoreductase, short c 96.5 0.0077 2.6E-07 50.5 7.7 40 74-113 42-82 (291)
374 4gmf_A Yersiniabactin biosynth 96.5 0.0012 4E-08 58.0 2.6 62 79-141 7-77 (372)
375 1rjw_A ADH-HT, alcohol dehydro 96.5 0.0019 6.5E-08 55.4 3.9 85 78-167 164-262 (339)
376 4gx0_A TRKA domain protein; me 96.5 0.0071 2.4E-07 55.4 7.9 78 80-159 349-435 (565)
377 3mw9_A GDH 1, glutamate dehydr 96.5 0.016 5.5E-07 52.4 10.0 101 76-186 241-366 (501)
378 1qyc_A Phenylcoumaran benzylic 96.4 0.0094 3.2E-07 49.5 8.1 61 79-139 4-86 (308)
379 4h3v_A Oxidoreductase domain p 96.4 0.0011 3.9E-08 57.2 2.4 63 79-141 6-86 (390)
380 1p0f_A NADP-dependent alcohol 96.4 0.0088 3E-07 51.8 8.0 85 78-167 191-294 (373)
381 3nrc_A Enoyl-[acyl-carrier-pro 96.4 0.011 3.6E-07 49.1 8.2 39 74-112 21-62 (280)
382 2hcy_A Alcohol dehydrogenase 1 96.4 0.0039 1.3E-07 53.5 5.5 85 78-167 169-270 (347)
383 3e48_A Putative nucleoside-dip 96.4 0.0051 1.7E-07 50.9 6.0 61 80-140 1-75 (289)
384 2fzw_A Alcohol dehydrogenase c 96.4 0.0096 3.3E-07 51.5 7.9 85 78-167 190-293 (373)
385 1e3i_A Alcohol dehydrogenase, 96.4 0.012 4E-07 51.1 8.5 85 78-167 195-298 (376)
386 1smk_A Malate dehydrogenase, g 96.4 0.0066 2.2E-07 52.1 6.7 62 79-140 8-86 (326)
387 2jhf_A Alcohol dehydrogenase E 96.4 0.011 3.6E-07 51.3 8.1 85 78-167 191-294 (374)
388 2csu_A 457AA long hypothetical 96.4 0.0078 2.7E-07 54.1 7.5 106 77-186 6-123 (457)
389 3m2p_A UDP-N-acetylglucosamine 96.4 0.0075 2.6E-07 50.4 7.0 61 79-140 2-72 (311)
390 3cps_A Glyceraldehyde 3-phosph 96.3 0.0064 2.2E-07 52.9 6.6 30 80-109 18-48 (354)
391 1ooe_A Dihydropteridine reduct 96.3 0.0047 1.6E-07 49.8 5.4 92 78-169 2-132 (236)
392 3v5n_A Oxidoreductase; structu 96.3 0.0021 7.1E-08 57.0 3.4 63 79-141 37-121 (417)
393 3orf_A Dihydropteridine reduct 96.3 0.0044 1.5E-07 50.6 5.2 94 76-169 19-147 (251)
394 1e3j_A NADP(H)-dependent ketos 96.3 0.0069 2.4E-07 52.0 6.6 86 78-168 168-273 (352)
395 2cf5_A Atccad5, CAD, cinnamyl 96.3 0.0027 9.4E-08 54.8 4.1 85 78-167 180-276 (357)
396 1iz0_A Quinone oxidoreductase; 96.3 0.0033 1.1E-07 52.9 4.4 83 78-167 125-219 (302)
397 3rft_A Uronate dehydrogenase; 96.3 0.004 1.4E-07 51.3 4.8 62 78-139 2-73 (267)
398 3dr3_A N-acetyl-gamma-glutamyl 96.3 0.0055 1.9E-07 53.0 5.9 84 80-168 5-108 (337)
399 3h8v_A Ubiquitin-like modifier 96.3 0.0047 1.6E-07 52.4 5.3 38 75-112 32-70 (292)
400 1zq6_A Otcase, ornithine carba 96.3 0.034 1.2E-06 48.4 10.9 97 77-174 188-326 (359)
401 2d8a_A PH0655, probable L-thre 96.3 0.0025 8.5E-08 54.8 3.7 85 78-167 167-268 (348)
402 3d6n_B Aspartate carbamoyltran 96.3 0.016 5.4E-07 49.1 8.5 87 76-166 143-251 (291)
403 3fi9_A Malate dehydrogenase; s 96.3 0.0027 9.2E-08 55.1 3.9 63 77-139 6-85 (343)
404 3upl_A Oxidoreductase; rossman 96.3 0.0034 1.2E-07 56.3 4.6 103 80-186 24-160 (446)
405 3mtj_A Homoserine dehydrogenas 96.3 0.0027 9.1E-08 57.0 3.9 104 79-186 10-131 (444)
406 3eag_A UDP-N-acetylmuramate:L- 96.3 0.0081 2.8E-07 51.4 6.8 107 79-185 4-135 (326)
407 1hdg_O Holo-D-glyceraldehyde-3 96.3 0.0042 1.4E-07 53.6 5.0 30 80-109 1-33 (332)
408 2q3e_A UDP-glucose 6-dehydroge 96.2 0.013 4.3E-07 52.8 8.2 92 76-170 326-446 (467)
409 1js1_X Transcarbamylase; alpha 96.2 0.029 9.8E-07 48.2 9.8 97 77-175 167-287 (324)
410 3uce_A Dehydrogenase; rossmann 96.2 0.004 1.4E-07 49.9 4.3 91 76-168 3-118 (223)
411 2r6j_A Eugenol synthase 1; phe 96.2 0.013 4.5E-07 49.1 7.6 61 79-139 11-88 (318)
412 1p9l_A Dihydrodipicolinate red 96.2 0.017 5.9E-07 47.6 8.1 49 80-138 1-53 (245)
413 3ip1_A Alcohol dehydrogenase, 96.2 0.0067 2.3E-07 53.3 6.0 86 78-167 213-319 (404)
414 1pl8_A Human sorbitol dehydrog 96.2 0.0073 2.5E-07 52.0 6.1 85 78-167 171-274 (356)
415 1dhr_A Dihydropteridine reduct 96.2 0.008 2.7E-07 48.6 6.0 93 77-169 5-136 (241)
416 4g65_A TRK system potassium up 96.2 0.0019 6.6E-08 58.2 2.4 62 79-140 3-78 (461)
417 3c1o_A Eugenol synthase; pheny 96.2 0.012 4E-07 49.4 7.1 61 79-139 4-86 (321)
418 1u8f_O GAPDH, glyceraldehyde-3 96.2 0.0075 2.6E-07 52.1 6.0 30 80-109 4-34 (335)
419 1pqw_A Polyketide synthase; ro 96.2 0.0013 4.5E-08 51.7 1.1 85 78-168 38-139 (198)
420 3k5i_A Phosphoribosyl-aminoimi 96.2 0.0091 3.1E-07 52.6 6.7 62 74-136 19-92 (403)
421 4ekn_B Aspartate carbamoyltran 96.1 0.026 8.8E-07 48.1 9.2 92 76-169 148-267 (306)
422 3uko_A Alcohol dehydrogenase c 96.1 0.0088 3E-07 51.9 6.4 85 78-167 193-296 (378)
423 2q1s_A Putative nucleotide sug 96.1 0.013 4.6E-07 50.5 7.6 66 76-141 29-110 (377)
424 1y1p_A ARII, aldehyde reductas 96.1 0.0068 2.3E-07 51.0 5.6 64 76-139 8-92 (342)
425 3ruf_A WBGU; rossmann fold, UD 96.1 0.011 3.9E-07 50.0 7.0 64 76-139 22-109 (351)
426 3h5n_A MCCB protein; ubiquitin 96.1 0.011 3.8E-07 51.3 7.0 38 75-112 114-152 (353)
427 1vkn_A N-acetyl-gamma-glutamyl 96.1 0.023 8E-07 49.3 8.9 83 79-168 13-109 (351)
428 3oqb_A Oxidoreductase; structu 96.1 0.0095 3.3E-07 51.8 6.5 63 79-141 6-94 (383)
429 2z1m_A GDP-D-mannose dehydrata 96.1 0.0071 2.4E-07 51.0 5.5 37 78-114 2-39 (345)
430 3e5r_O PP38, glyceraldehyde-3- 96.1 0.0084 2.9E-07 51.8 6.0 30 80-109 4-34 (337)
431 1bgv_A Glutamate dehydrogenase 96.1 0.025 8.6E-07 50.7 9.2 105 75-186 226-365 (449)
432 3r3s_A Oxidoreductase; structu 96.1 0.037 1.3E-06 46.2 9.9 37 75-111 45-82 (294)
433 1lnq_A MTHK channels, potassiu 96.1 0.0037 1.3E-07 53.5 3.7 78 79-159 115-204 (336)
434 2wm3_A NMRA-like family domain 96.1 0.0095 3.2E-07 49.5 6.1 61 79-139 5-81 (299)
435 3vh1_A Ubiquitin-like modifier 96.1 0.0096 3.3E-07 55.2 6.5 37 75-111 323-360 (598)
436 2dq4_A L-threonine 3-dehydroge 96.0 0.004 1.4E-07 53.4 3.7 85 78-167 164-263 (343)
437 1b8p_A Protein (malate dehydro 96.0 0.017 5.6E-07 49.6 7.6 89 79-167 5-134 (329)
438 3gg2_A Sugar dehydrogenase, UD 96.0 0.018 6.1E-07 51.6 8.1 92 75-170 314-422 (450)
439 3slg_A PBGP3 protein; structur 96.0 0.008 2.7E-07 51.5 5.6 64 76-139 21-100 (372)
440 1nvm_B Acetaldehyde dehydrogen 96.0 0.0072 2.5E-07 51.6 5.2 61 79-139 4-80 (312)
441 4gsl_A Ubiquitin-like modifier 96.0 0.0099 3.4E-07 55.2 6.4 65 34-112 295-360 (615)
442 3cmc_O GAPDH, glyceraldehyde-3 96.0 0.006 2.1E-07 52.7 4.7 30 80-109 2-32 (334)
443 2r00_A Aspartate-semialdehyde 96.0 0.0064 2.2E-07 52.5 4.9 84 79-167 3-97 (336)
444 2yfk_A Aspartate/ornithine car 96.0 0.017 5.6E-07 51.4 7.6 91 77-167 186-332 (418)
445 2yyy_A Glyceraldehyde-3-phosph 96.0 0.016 5.3E-07 50.3 7.3 82 80-165 3-112 (343)
446 1xq6_A Unknown protein; struct 96.0 0.0084 2.9E-07 48.1 5.3 63 78-140 3-79 (253)
447 3uog_A Alcohol dehydrogenase; 96.0 0.0054 1.9E-07 53.0 4.3 84 78-167 189-288 (363)
448 3s2e_A Zinc-containing alcohol 96.0 0.0037 1.2E-07 53.5 3.2 84 78-166 166-263 (340)
449 4h31_A Otcase, ornithine carba 96.0 0.049 1.7E-06 47.4 10.4 92 75-166 177-300 (358)
450 2c5a_A GDP-mannose-3', 5'-epim 96.0 0.024 8.2E-07 48.9 8.4 63 77-139 27-102 (379)
451 1qyd_A Pinoresinol-lariciresin 96.0 0.037 1.2E-06 46.0 9.2 62 79-140 4-86 (313)
452 3oh8_A Nucleoside-diphosphate 96.0 0.014 4.7E-07 52.9 7.0 61 79-139 147-210 (516)
453 2q1w_A Putative nucleotide sug 95.9 0.012 4.2E-07 49.7 6.2 66 74-139 16-98 (333)
454 1fjh_A 3alpha-hydroxysteroid d 95.9 0.014 4.9E-07 47.3 6.3 92 80-171 2-118 (257)
455 1ebf_A Homoserine dehydrogenas 95.9 0.01 3.6E-07 51.7 5.7 31 80-110 5-40 (358)
456 2zcu_A Uncharacterized oxidore 95.9 0.0033 1.1E-07 51.7 2.3 59 81-139 1-74 (286)
457 3b1j_A Glyceraldehyde 3-phosph 95.9 0.0073 2.5E-07 52.3 4.5 29 80-108 3-34 (339)
458 2x4g_A Nucleoside-diphosphate- 95.8 0.017 5.9E-07 48.6 6.8 61 79-139 13-86 (342)
459 4ej6_A Putative zinc-binding d 95.8 0.0078 2.7E-07 52.2 4.7 85 78-167 182-285 (370)
460 3ius_A Uncharacterized conserv 95.8 0.0072 2.5E-07 49.8 4.3 61 79-141 5-74 (286)
461 2pk3_A GDP-6-deoxy-D-LYXO-4-he 95.8 0.012 4.1E-07 49.2 5.7 63 78-140 11-84 (321)
462 2h6e_A ADH-4, D-arabinose 1-de 95.8 0.0062 2.1E-07 52.2 4.0 84 78-166 170-269 (344)
463 3ip3_A Oxidoreductase, putativ 95.8 0.0053 1.8E-07 52.6 3.5 60 80-140 3-77 (337)
464 1o6z_A MDH, malate dehydrogena 95.8 0.018 6.1E-07 48.8 6.8 109 80-188 1-143 (303)
465 2dkn_A 3-alpha-hydroxysteroid 95.8 0.015 5.1E-07 46.8 6.0 60 80-139 2-71 (255)
466 1uay_A Type II 3-hydroxyacyl-C 95.8 0.024 8.3E-07 45.3 7.2 60 79-139 2-75 (242)
467 2x0j_A Malate dehydrogenase; o 95.8 0.0061 2.1E-07 51.7 3.7 88 80-167 1-119 (294)
468 1sb8_A WBPP; epimerase, 4-epim 95.8 0.015 5E-07 49.5 6.2 66 75-140 23-112 (352)
469 2a4k_A 3-oxoacyl-[acyl carrier 95.8 0.0085 2.9E-07 49.4 4.4 38 76-113 3-41 (263)
470 4fs3_A Enoyl-[acyl-carrier-pro 95.8 0.01 3.4E-07 48.9 4.8 39 75-113 2-43 (256)
471 3t7c_A Carveol dehydrogenase; 95.7 0.0087 3E-07 50.3 4.5 41 73-113 22-63 (299)
472 4eye_A Probable oxidoreductase 95.7 0.0065 2.2E-07 52.1 3.7 83 78-166 159-257 (342)
473 4ffl_A PYLC; amino acid, biosy 95.7 0.021 7.1E-07 49.1 6.9 58 80-137 2-70 (363)
474 1sny_A Sniffer CG10964-PA; alp 95.7 0.02 6.7E-07 46.7 6.4 42 73-114 15-60 (267)
475 1rm4_O Glyceraldehyde 3-phosph 95.7 0.008 2.8E-07 52.0 4.2 29 80-108 2-33 (337)
476 2x5j_O E4PDH, D-erythrose-4-ph 95.7 0.0088 3E-07 51.8 4.2 30 80-109 3-36 (339)
477 2y0c_A BCEC, UDP-glucose dehyd 95.6 0.043 1.5E-06 49.5 8.9 95 75-174 324-445 (478)
478 2p4h_X Vestitone reductase; NA 95.6 0.036 1.2E-06 46.2 7.9 60 79-138 1-82 (322)
479 2d2i_A Glyceraldehyde 3-phosph 95.6 0.0092 3.2E-07 52.4 4.3 29 80-108 3-34 (380)
480 3ay3_A NAD-dependent epimerase 95.6 0.01 3.5E-07 48.5 4.3 61 80-140 3-73 (267)
481 2ydy_A Methionine adenosyltran 95.6 0.015 5E-07 48.6 5.4 61 79-139 2-69 (315)
482 3vtz_A Glucose 1-dehydrogenase 95.6 0.02 6.9E-07 47.3 6.1 66 74-139 9-90 (269)
483 2nm0_A Probable 3-oxacyl-(acyl 95.6 0.017 5.8E-07 47.3 5.6 65 75-139 17-96 (253)
484 3h9e_O Glyceraldehyde-3-phosph 95.6 0.011 3.9E-07 51.1 4.6 33 79-111 7-40 (346)
485 3kzn_A Aotcase, N-acetylornith 95.6 0.15 5.1E-06 44.3 11.8 98 76-174 187-326 (359)
486 3tl3_A Short-chain type dehydr 95.6 0.016 5.5E-07 47.3 5.4 38 75-112 5-43 (257)
487 2o3j_A UDP-glucose 6-dehydroge 95.6 0.035 1.2E-06 50.1 8.0 97 76-176 332-455 (481)
488 3sxp_A ADP-L-glycero-D-mannohe 95.5 0.025 8.6E-07 48.3 6.7 39 75-113 6-47 (362)
489 3q98_A Transcarbamylase; rossm 95.5 0.051 1.8E-06 47.9 8.8 91 76-166 188-334 (399)
490 1rkx_A CDP-glucose-4,6-dehydra 95.5 0.02 6.8E-07 48.7 6.1 64 76-139 6-89 (357)
491 3d4o_A Dipicolinate synthase s 95.5 0.078 2.7E-06 44.4 9.6 105 77-186 3-119 (293)
492 1v3u_A Leukotriene B4 12- hydr 95.5 0.0072 2.5E-07 51.4 3.2 84 78-167 145-245 (333)
493 3fpc_A NADP-dependent alcohol 95.5 0.0082 2.8E-07 51.6 3.6 84 78-166 166-266 (352)
494 3gms_A Putative NADPH:quinone 95.5 0.0076 2.6E-07 51.5 3.4 84 78-167 144-244 (340)
495 2rh8_A Anthocyanidin reductase 95.5 0.046 1.6E-06 46.0 8.2 60 79-138 9-88 (338)
496 2dtx_A Glucose 1-dehydrogenase 95.5 0.035 1.2E-06 45.6 7.2 64 76-139 5-83 (264)
497 2a35_A Hypothetical protein PA 95.5 0.021 7.1E-07 44.7 5.6 62 78-141 4-76 (215)
498 3tpc_A Short chain alcohol deh 95.5 0.089 3E-06 42.7 9.6 39 76-114 4-43 (257)
499 1e6u_A GDP-fucose synthetase; 95.5 0.023 7.9E-07 47.4 6.1 62 78-141 2-66 (321)
500 3ek2_A Enoyl-(acyl-carrier-pro 95.4 0.031 1.1E-06 45.5 6.7 39 74-112 9-50 (271)
No 1
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=2.6e-64 Score=441.35 Aligned_cols=219 Identities=23% Similarity=0.321 Sum_probs=201.5
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCcccc
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKL 77 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l 77 (223)
.+|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.++++.|..... ..+.+|
T Consensus 61 ~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~-~~~~~l 139 (334)
T 3kb6_A 61 KMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSE-ILAREL 139 (334)
T ss_dssp TCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGG-GCBCCG
T ss_pred cCCCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccc-ccccee
Confidence 3799999999999999999999999998 69999999999999999999999999999999999875432 257899
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC--CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV--LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE 155 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~ 155 (223)
+|+|+||||+|+||+.+|+++++|||+|++||+...... ....+.+++|++++||+|++|+|+|++|+++||++.|++
T Consensus 140 ~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~ 219 (334)
T 3kb6_A 140 NRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred cCcEEEEECcchHHHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhh
Confidence 999999999999999999999999999999998765421 233467999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCC----------------CCCCCCceEEccCCCCCC
Q 035615 156 LGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPK----------------EPLRLDNIVLLPCQNALT 219 (223)
Q Consensus 156 mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~----------------~l~~~~nv~~TPH~a~~t 219 (223)
||+|++|||+|||++||++||++||++|+|+||+||||++||++.+ |||.+|||++|||+||+|
T Consensus 220 mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia~~T 299 (334)
T 3kb6_A 220 MKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYT 299 (334)
T ss_dssp SCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCB
T ss_pred cCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEECCchhhCh
Confidence 9999999999999999999999999999999999999999997421 588999999999999999
Q ss_pred CC
Q 035615 220 HW 221 (223)
Q Consensus 220 ~~ 221 (223)
.|
T Consensus 300 ~e 301 (334)
T 3kb6_A 300 DK 301 (334)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 2
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=7.5e-62 Score=426.82 Aligned_cols=219 Identities=26% Similarity=0.417 Sum_probs=202.4
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCC-CCCCcccc
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTG-DYPLGFKL 77 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~-~~~~~~~l 77 (223)
.|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|.|.... ....+.+|
T Consensus 92 ~~~Lk~I~~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l 171 (345)
T 4g2n_A 92 QPGLKTIATLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGL 171 (345)
T ss_dssp TTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCC
T ss_pred cCCceEEEEcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCccccccccc
Confidence 379999999999999999999999999 6999999999999999999999999999999999997532 12357899
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC---CCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS---VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~---~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
+|+||||||+|+||+.+|+++++|||+|++|||++... .+.....++++++++||+|++|+|++++|+++|+++.|+
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~ 251 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIA 251 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHH
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHh
Confidence 99999999999999999999999999999999986432 133444699999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
.||+|++|||+|||+++|++||+++|++|+|.||+||||++||..++|||++|||++|||+|++|.+
T Consensus 252 ~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e 318 (345)
T 4g2n_A 252 KIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHE 318 (345)
T ss_dssp HSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHH
T ss_pred hCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHH
Confidence 9999999999999999999999999999999999999999999556799999999999999999975
No 3
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-62 Score=428.62 Aligned_cols=219 Identities=33% Similarity=0.520 Sum_probs=180.5
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||+++++++|| +||+++++||||+++++|++.|++..+++.+++|.|.....++.+.+|+
T Consensus 91 ~p~Lk~I~~~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~ 170 (340)
T 4dgs_A 91 LPSLGIIAINGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPK 170 (340)
T ss_dssp CSSCCEEEEESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCT
T ss_pred CCCCEEEEECCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCcccccc
Confidence 799999999999999999999999999 7999999999999999999999999999999999998542334578999
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELGK 158 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ 158 (223)
||||||||+|+||+.+|+++++||++|++|||++....+.....+++|++++||+|++|+|++++|+++++++.|+.||+
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~ 250 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGP 250 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCC
Confidence 99999999999999999999999999999999887655555667999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 159 GGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 159 ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+++|||++||+++|+++|+++|++|+|.||+||||++||++++|||++|||++|||+|++|.|
T Consensus 251 gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e 313 (340)
T 4dgs_A 251 EGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVE 313 (340)
T ss_dssp TCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHH
T ss_pred CCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHH
Confidence 999999999999999999999999999999999999999988899999999999999999975
No 4
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=3.3e-61 Score=419.81 Aligned_cols=217 Identities=18% Similarity=0.261 Sum_probs=202.9
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHH-HHHHHcCCCCCCCCCCCccc
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPG-NWYVRAGLWAKTGDYPLGFK 76 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~-~~~~~~~~w~~~~~~~~~~~ 76 (223)
.+|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+ ++.++++.|.... .+.+
T Consensus 58 ~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~---~~~~ 134 (324)
T 3evt_A 58 PTNQLKFVQVISAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM---TTST 134 (324)
T ss_dssp TTCCCCEEECSSSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS---CCCC
T ss_pred hCCCceEEEECCccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC---CCcc
Confidence 3799999999999999999999999998 799999999999999999999999999 9999999998542 4688
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcc---cccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFP---YCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~---~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
|+|+||||||+|.||+.+|+++++|||+|++|||+++....+. ...++++++++||+|++|+|+|++|+++|+++.|
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l 214 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELF 214 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHH
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHH
Confidence 9999999999999999999999999999999999876554322 3468999999999999999999999999999999
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCCCceEEccCCCCCCCC
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+.||+|++|||+|||+++|+++|+++|++|+|.||++|||++||++. +|||++|||++|||+|++|.+
T Consensus 215 ~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~ 283 (324)
T 3evt_A 215 QQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAH 283 (324)
T ss_dssp HTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCC
T ss_pred hcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHH
Confidence 99999999999999999999999999999999999999999999876 499999999999999999976
No 5
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=3.5e-61 Score=419.37 Aligned_cols=214 Identities=21% Similarity=0.332 Sum_probs=199.4
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||.+++++ || +||+++.+||||+++++|++.|++..+++.+++|.|... .+.+|+
T Consensus 65 ~~~Lk~I~~~~~G~d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~----~~~~l~ 139 (324)
T 3hg7_A 65 ANKLSWFQSTYAGVDVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH----PYQGLK 139 (324)
T ss_dssp CTTCCEEEESSSCCGGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC----CCCCST
T ss_pred CCCceEEEECCCCCCccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC----CCcccc
Confidence 799999999999999999988754 88 699999999999999999999999999999999999853 457899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc---ccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLF---PYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE 155 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~---~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~ 155 (223)
|+||||||+|+||+.+|+++++|||+|++|||+++....+ ....++++++++||+|++|+|+|++|+++|+++.|+.
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~ 219 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEH 219 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTC
T ss_pred cceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhc
Confidence 9999999999999999999999999999999987654432 2356899999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCC-CCCCCCceEEccCCCCCCCC
Q 035615 156 LGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPK-EPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 156 mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~-~l~~~~nv~~TPH~a~~t~~ 221 (223)
||+|++|||+|||+++|+++|+++|++|+|+||+||||++||++.+ |||++|||++|||+|++|.+
T Consensus 220 mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~ 286 (324)
T 3hg7_A 220 CKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP 286 (324)
T ss_dssp SCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH
T ss_pred CCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH
Confidence 9999999999999999999999999999999999999999998764 99999999999999999975
No 6
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=4.3e-61 Score=423.04 Aligned_cols=219 Identities=23% Similarity=0.350 Sum_probs=202.1
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||+++++++|| +||+|+.+||||+++++|++.|++..+++.+++|.|........+.+|+
T Consensus 84 ~p~Lk~i~~~g~G~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~ 163 (351)
T 3jtm_A 84 AKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLE 163 (351)
T ss_dssp CSSCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCST
T ss_pred CCCCeEEEEeCeeecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCccccc
Confidence 799999999999999999999999999 6999999999999999999999999999999999997431112357899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
|+||||||+|+||+.+|+++++|||+|++|||++.... ++....++++++++||+|++|+|++++|+++|+++.|
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHH
T ss_pred CCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHH
Confidence 99999999999999999999999999999999864432 3444568999999999999999999999999999999
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCC-CCCCCCceEEccCCCCCCCC
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPK-EPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~-~l~~~~nv~~TPH~a~~t~~ 221 (223)
+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++.+ |||++|||++|||+|+.|.+
T Consensus 244 ~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~e 312 (351)
T 3jtm_A 244 GKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTID 312 (351)
T ss_dssp HHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHH
T ss_pred hcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHH
Confidence 999999999999999999999999999999999999999999998764 99999999999999999865
No 7
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=5.3e-60 Score=422.78 Aligned_cols=217 Identities=26% Similarity=0.397 Sum_probs=198.0
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||+|++.++|+||||+++++++|| +||+|+++||||+++++|++.|++..+++.+++|.|.+.. ..+.+++
T Consensus 78 ~p~Lk~I~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~--~~~~el~ 155 (416)
T 3k5p_A 78 ANRLIAVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTA--IGSREVR 155 (416)
T ss_dssp CTTCCEEEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC--TTCCCST
T ss_pred CCCcEEEEECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccC--CCCccCC
Confidence 799999999999999999999999998 6999999999999999999999999999999999998642 2467899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELG 157 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk 157 (223)
|||+||||+|+||+.+|+++++|||+|++||+++.... ......++++++++||+|++|+|++++|+++|+++.|+.||
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk 235 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMK 235 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCC
Confidence 99999999999999999999999999999999865443 33456799999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-----CCCCCCCceEEccCCCCCCCC
Q 035615 158 KGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-----KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 158 ~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-----~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+|++|||+|||+++|++||+++|++|++.||++|||++||+++ +|||++|||++|||+|++|.|
T Consensus 236 ~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~e 304 (416)
T 3k5p_A 236 KGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEE 304 (416)
T ss_dssp TTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHH
T ss_pred CCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHH
Confidence 9999999999999999999999999999999999999999865 489999999999999999976
No 8
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=7.7e-60 Score=409.90 Aligned_cols=214 Identities=22% Similarity=0.310 Sum_probs=195.7
Q ss_pred ccceEEEEccccchhH-h-HHH---HHhcCC----CCCC-CcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCC
Q 035615 4 YQTNLYACILSEYQNW-L-KQL---IKQKSI----AKQA-DLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPL 73 (223)
Q Consensus 4 p~Lk~i~~~~aG~d~i-d-~~~---~~~~~i----~~~~-~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~ 73 (223)
|+||||++.++|+||| | +++ +.++|| ++++ ++.+||||+++++|++.|++..+++.+++|.|... .
T Consensus 58 ~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~----~ 133 (315)
T 3pp8_A 58 RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL----P 133 (315)
T ss_dssp CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC----C
T ss_pred CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC----C
Confidence 9999999999999999 7 776 667787 4554 47999999999999999999999999999999754 4
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCccc---ccChhhhhcCCcEEEEeccCChhhhhccCH
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPY---CANVYDLAVNSDVLVVCCALTEQTHHIINK 150 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~---~~~l~el~~~aDiv~~~~p~t~~t~~li~~ 150 (223)
+.+++|+||||||+|+||+.+|+++++|||+|++|+|+++...+... ..++++++++||+|++|+|+|++|+++|++
T Consensus 134 ~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~ 213 (315)
T 3pp8_A 134 EYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINS 213 (315)
T ss_dssp CCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSH
T ss_pred CCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccH
Confidence 57899999999999999999999999999999999998876554432 258999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCCCceEEccCCCCCCCC
Q 035615 151 DVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++. +|||++|||++|||+|++|.+
T Consensus 214 ~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~ 285 (315)
T 3pp8_A 214 ELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP 285 (315)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH
T ss_pred HHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH
Confidence 99999999999999999999999999999999999999999999999876 499999999999999999974
No 9
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=7.4e-60 Score=422.27 Aligned_cols=217 Identities=20% Similarity=0.304 Sum_probs=193.7
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||+++++++|| +|++|+.+||||++++||++.|+++.+++.+++|.|.+.. ..+.+|+
T Consensus 67 ~~~Lk~I~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~--~~~~el~ 144 (404)
T 1sc6_A 67 AEKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLA--AGSFEAR 144 (404)
T ss_dssp CSSCCEEEECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-------CCCST
T ss_pred CCCCcEEEECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccC--CCccccC
Confidence 799999999999999999999999998 6999999999999999999999999999999999997532 2467899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCC-cccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVL-FPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELG 157 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~-~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk 157 (223)
|||+||||+|+||+.+|+++++|||+|++|||++....+ .....+++|++++||+|++|+|++++|+++|+++.|+.||
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk 224 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMK 224 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSC
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcC
Confidence 999999999999999999999999999999998765433 3445689999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-----CCCCCCCceEEccCCCCCCCC
Q 035615 158 KGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-----KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 158 ~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-----~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+|++|||+|||+++|+++|+++|++|++.||+||||+.||++. +|||++|||++|||+|++|.|
T Consensus 225 ~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~e 293 (404)
T 1sc6_A 225 PGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQE 293 (404)
T ss_dssp TTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHH
T ss_pred CCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHH
Confidence 9999999999999999999999999999999999999999863 489999999999999999975
No 10
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=9.9e-61 Score=418.66 Aligned_cols=219 Identities=23% Similarity=0.321 Sum_probs=201.2
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCcccc
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKL 77 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l 77 (223)
.+|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|.|..... ..+.+|
T Consensus 61 ~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~l 139 (334)
T 2pi1_A 61 KMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSE-ILAREL 139 (334)
T ss_dssp TCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGG-GCBCCG
T ss_pred hCCCCeEEEECCccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccC-ccceec
Confidence 4799999999999999999999999998 69999999999999999999999999999999999975311 147899
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC--CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV--LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE 155 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~ 155 (223)
+|+||||||+|+||+.+|+++++|||+|++|||++.... ......++++++++||+|++|+|+|++|+++|+++.|+.
T Consensus 140 ~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 140 NRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred cCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhh
Confidence 999999999999999999999999999999999876431 122345799999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCC---------------C-CCCCCCCCceEEccCCCCCC
Q 035615 156 LGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPN---------------V-PKEPLRLDNIVLLPCQNALT 219 (223)
Q Consensus 156 mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~---------------~-~~~l~~~~nv~~TPH~a~~t 219 (223)
||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+ + ++|||++|||++|||+|++|
T Consensus 220 mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t 299 (334)
T 2pi1_A 220 MKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYT 299 (334)
T ss_dssp SCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCB
T ss_pred CCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccCh
Confidence 9999999999999999999999999999999999999999997 2 34899999999999999999
Q ss_pred CC
Q 035615 220 HW 221 (223)
Q Consensus 220 ~~ 221 (223)
.+
T Consensus 300 ~e 301 (334)
T 2pi1_A 300 DK 301 (334)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 11
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=5e-60 Score=413.70 Aligned_cols=218 Identities=24% Similarity=0.413 Sum_probs=201.4
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||++++.++|| +||+++.+||||+++++|++.|++..+++.+++|.|........+.+|+
T Consensus 65 ~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~ 144 (330)
T 4e5n_A 65 CPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLD 144 (330)
T ss_dssp CTTCCEEEESSSCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCST
T ss_pred CCCCcEEEECCCcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccC
Confidence 699999999999999999999999998 6999999999999999999999999999999999997432233578999
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
|+||||||+|+||+.+|+++++|||+|++|||++.... +. ...++++++++||+|++|+|++++|+++++++.|
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGL-RQVACSELFASSDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTE-EECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCc-eeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHH
Confidence 99999999999999999999999999999999874321 22 3458999999999999999999999999999999
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCC-------CCCCC-CCCCCCceEEccCCCCCCCC
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFEND-------PNVPK-EPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~E-------P~~~~-~l~~~~nv~~TPH~a~~t~~ 221 (223)
+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++| |++.+ |||++|||++|||+|++|.+
T Consensus 224 ~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e 299 (330)
T 4e5n_A 224 ALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRA 299 (330)
T ss_dssp TTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHH
T ss_pred hhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHH
Confidence 9999999999999999999999999999999999999999999 97654 99999999999999999964
No 12
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=2.6e-59 Score=413.04 Aligned_cols=219 Identities=17% Similarity=0.221 Sum_probs=195.9
Q ss_pred CCccceEEEEc-cccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCC-CCCcc
Q 035615 2 LCYQTNLYACI-LSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGD-YPLGF 75 (223)
Q Consensus 2 ~~p~Lk~i~~~-~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~-~~~~~ 75 (223)
.+|+||||+++ ++|+||||+++++++|| +||+|+.+||||+++++|++.|++..+++.+++|.|.+... ...+.
T Consensus 93 ~~p~Lk~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~ 172 (365)
T 4hy3_A 93 RMPALRSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASAR 172 (365)
T ss_dssp TCTTCCEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCC
T ss_pred hCCCCeEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCcccccccccccc
Confidence 48999999975 88999999999999999 69999999999999999999999999999999998543211 23578
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC---CcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV---LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~---~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
+|+|+||||||+|+||+.+|+++++|||+|++|||+..... ......++++++++||+|++|+|++++|+++|+++.
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~ 252 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEA 252 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHH
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHH
Confidence 99999999999999999999999999999999999864321 112356899999999999999999999999999999
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCCCceEEccCCCCCCCC
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~~nv~~TPH~a~~t~~ 221 (223)
|+.||+|++|||+|||+++|++||+++|++|+|. |+||||++||+++ +|||++|||++|||+||+|.+
T Consensus 253 l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e 321 (365)
T 4hy3_A 253 FSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDS 321 (365)
T ss_dssp HHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHH
T ss_pred HhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHH
Confidence 9999999999999999999999999999999998 9999999999876 499999999999999999975
No 13
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=1.5e-59 Score=412.00 Aligned_cols=217 Identities=18% Similarity=0.305 Sum_probs=196.6
Q ss_pred ccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHH-cCCCCCCCCCCCccccC
Q 035615 4 YQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVR-AGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 4 p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~-~~~w~~~~~~~~~~~l~ 78 (223)
|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.++ +|.|.+... ..+.+|+
T Consensus 69 ~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~-~~~~~l~ 147 (343)
T 2yq5_A 69 YGVKCIGLRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSN-LISNEIY 147 (343)
T ss_dssp TTCCEEEESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGG-GCBCCGG
T ss_pred cCceEEEECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccC-CCccccC
Confidence 46999999999999999999999998 69999999999999999999999999999999 887754222 3578999
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELG 157 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk 157 (223)
|+||||||+|+||+.+|+++++|||+|++|||++.... ....+.++++++++||+|++|+|+|++|+++|+++.|+.||
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk 227 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMK 227 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSC
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCC
Confidence 99999999999999999999999999999999876432 22345699999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCC--CCCC------------CCCCCCceEEccCCCCCCCC
Q 035615 158 KGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDP--NVPK------------EPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 158 ~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP--~~~~------------~l~~~~nv~~TPH~a~~t~~ 221 (223)
+|++|||+|||+++|+++|+++|++|+|.||+||||++|| ++.+ |||++|||++|||+|++|.+
T Consensus 228 ~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~e 305 (343)
T 2yq5_A 228 KSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTET 305 (343)
T ss_dssp TTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHH
T ss_pred CCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHH
Confidence 9999999999999999999999999999999999999999 3333 79999999999999999975
No 14
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.8e-59 Score=399.13 Aligned_cols=215 Identities=24% Similarity=0.286 Sum_probs=200.7
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCC---CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSI---AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i---~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
.+|+||||++.++|+||||+++++++++ ++|.|+.+||||+++++|++.|++..+++.+++|.|... ...+|+
T Consensus 46 ~~~~Lk~I~~~~~G~d~id~~~~~~~~~~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~----~~~~l~ 121 (290)
T 3gvx_A 46 LGKRTKMIQAISAGVDHIDVNGIPENVVLCSNAGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQS----PTTLLY 121 (290)
T ss_dssp CCSSCCEEEECSSCCTTSCGGGSCTTSEEECCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC----CCCCCT
T ss_pred hhhhhHHHHHHhcCCceeecCCCccceEEeecCCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccC----Cceeee
Confidence 3799999999999999999999988776 578899999999999999999999999999999999854 236799
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELGK 158 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ 158 (223)
|+||||||+|.||+.+|+++++|||+|++|||++..........++++++++||+|++|+|++++|+++++++.|+.||+
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~ 201 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARK 201 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCT
T ss_pred cchheeeccCchhHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhc
Confidence 99999999999999999999999999999999887665555556999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCC-CCCCCC
Q 035615 159 GGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQN-ALTHWE 222 (223)
Q Consensus 159 ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a-~~t~~~ 222 (223)
|++|||+|||+++|+++|+++|++|++.+|++|||++||+ +|||++||+++|||+| ++|.+.
T Consensus 202 gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~--~pL~~~~nvilTPHiag~~t~e~ 264 (290)
T 3gvx_A 202 NLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE--ITETNLRNAILSPHVAGGMSGEI 264 (290)
T ss_dssp TCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS--CCSCCCSSEEECCSCSSCBTTBC
T ss_pred CceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc--cchhhhhhhhcCccccCCccchH
Confidence 9999999999999999999999999999999999999997 8999999999999999 777663
No 15
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=4.7e-59 Score=410.38 Aligned_cols=219 Identities=23% Similarity=0.312 Sum_probs=201.5
Q ss_pred CCccceEEEEccccc----hhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCC----
Q 035615 2 LCYQTNLYACILSEY----QNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTG---- 69 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~----d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~---- 69 (223)
.+|+||+|+++++|+ ||||+++++++|| +||+ +.+||||+++++|++.|++..+++.+++|.|....
T Consensus 68 ~~~~Lk~I~~~g~G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~ 146 (352)
T 3gg9_A 68 RLPKLKIISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKST 146 (352)
T ss_dssp TCTTCCEEEESSCCCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCT
T ss_pred hCCCCeEEEEeCcccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCccccccc
Confidence 379999999999999 9999999999998 6999 99999999999999999999999999999998532
Q ss_pred ----CCCCccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC----CCcccccChhhhhcCCcEEEEeccCC
Q 035615 70 ----DYPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS----VLFPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 70 ----~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
....+.+|+|+||||||+|.||+.+|+++++||++|++|||+.... .++....++++++++||+|++|+|++
T Consensus 147 ~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt 226 (352)
T 3gg9_A 147 TMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLN 226 (352)
T ss_dssp TSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCS
T ss_pred ccccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCc
Confidence 1124789999999999999999999999999999999999875321 24444559999999999999999999
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCCCceEEccCCCCCCC
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRLDNIVLLPCQNALTH 220 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~~nv~~TPH~a~~t~ 220 (223)
++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++. +|||++|||++|||+|++|.
T Consensus 227 ~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~ 306 (352)
T 3gg9_A 227 DETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVER 306 (352)
T ss_dssp TTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBH
T ss_pred HHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999875 59999999999999999986
Q ss_pred C
Q 035615 221 W 221 (223)
Q Consensus 221 ~ 221 (223)
+
T Consensus 307 e 307 (352)
T 3gg9_A 307 E 307 (352)
T ss_dssp H
T ss_pred H
Confidence 5
No 16
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=3.6e-58 Score=409.29 Aligned_cols=219 Identities=23% Similarity=0.336 Sum_probs=200.5
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||+++++++|| ++++|+.+||||++++||++.|++..+++.+++|.|........+.+|+
T Consensus 111 ~p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~ 190 (393)
T 2nac_A 111 AKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLE 190 (393)
T ss_dssp CTTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCT
T ss_pred CCCCcEEEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCC
Confidence 799999999999999999999999999 6999999999999999999999999999999999996321111357899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
|+||||||+|+||+.+|+++++|||+|++||+++.... +.....++++++++||+|++|+|++++|+++|+++.|
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l 270 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETL 270 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHH
Confidence 99999999999999999999999999999999865432 3333468999999999999999999999999999999
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCCCceEEccCCCCCCCC
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++. +|||++|||++|||+|+.|.+
T Consensus 271 ~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e 339 (393)
T 2nac_A 271 KLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLT 339 (393)
T ss_dssp TTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHH
T ss_pred hhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHH
Confidence 99999999999999999999999999999999999999999999865 599999999999999999964
No 17
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=6.7e-58 Score=400.80 Aligned_cols=218 Identities=26% Similarity=0.318 Sum_probs=198.0
Q ss_pred Ccc--ceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccc
Q 035615 3 CYQ--TNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFK 76 (223)
Q Consensus 3 ~p~--Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~ 76 (223)
+|+ ||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|.|.+... ..+.+
T Consensus 64 ~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~ 142 (333)
T 1dxy_A 64 MHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGT-FIGKE 142 (333)
T ss_dssp HHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTC-CCCCC
T ss_pred CcccCceEEEEcCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccC-CCccC
Confidence 466 999999999999999999999998 69999999999999999999999999999999999853111 24678
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE 155 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~ 155 (223)
|.|+||||||+|+||+.+|+++++|||+|++|||++.... ....+.++++++++||+|++|+|++++|+++|+++.|+.
T Consensus 143 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~ 222 (333)
T 1dxy_A 143 LGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNL 222 (333)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhh
Confidence 9999999999999999999999999999999999876431 122346899999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCC----------CC----CCCCCCCceEEccCCCCCCCC
Q 035615 156 LGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPN----------VP----KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 156 mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~----------~~----~~l~~~~nv~~TPH~a~~t~~ 221 (223)
||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+ .+ +|||++|||++|||+|++|.+
T Consensus 223 mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e 302 (333)
T 1dxy_A 223 MKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTET 302 (333)
T ss_dssp SCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHH
T ss_pred CCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccChHH
Confidence 9999999999999999999999999999999999999999993 12 369999999999999999975
No 18
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=3.2e-58 Score=407.03 Aligned_cols=219 Identities=20% Similarity=0.284 Sum_probs=199.9
Q ss_pred CccceEEEEccccchhHhHHHHHhc--CC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccc
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQK--SI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFK 76 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~--~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~ 76 (223)
+|+||||++.++|+||||+++++++ || +||+|+.+||||++++||++.|++..+++.+++|.|........+.+
T Consensus 82 ~~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~ 161 (364)
T 2j6i_A 82 AKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYD 161 (364)
T ss_dssp CTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCC
T ss_pred CCCCeEEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCccc
Confidence 6999999999999999999999999 98 69999999999999999999999999999999999963210013578
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCE-EEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCH
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFI-ISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINK 150 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~-V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~ 150 (223)
|+|+||||||+|+||+.+|+++++|||+ |++||+++.... +.....++++++++||+|++|+|.+++|+++|++
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~ 241 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINK 241 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCH
Confidence 9999999999999999999999999997 999998774322 2333458999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCC--C---ceEEccCCCCCCCC
Q 035615 151 DVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRL--D---NIVLLPCQNALTHW 221 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~--~---nv~~TPH~a~~t~~ 221 (223)
+.|+.||++++|||+|||+++|+++|+++|++|+|.||+||||++||++. +|||.+ | ||++|||+|++|.+
T Consensus 242 ~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e 318 (364)
T 2j6i_A 242 ELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLD 318 (364)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHH
T ss_pred HHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHH
Confidence 99999999999999999999999999999999999999999999999876 489999 9 99999999999865
No 19
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-57 Score=398.53 Aligned_cols=216 Identities=24% Similarity=0.365 Sum_probs=200.3
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||+++++++|| +||+|+.+||||+++++|++.|++..+++.+++|.|.... ..+.+++
T Consensus 87 ~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~--~~~~~l~ 164 (335)
T 2g76_A 87 AEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKK--FMGTELN 164 (335)
T ss_dssp CSSCCEEEESSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGG--GCBCCCT
T ss_pred CCCCcEEEECCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccC--CCCcCCC
Confidence 799999999999999999999999998 6999999999999999999999999999999999997431 1367899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC----CCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
|+||||||+|.||+.+|+++++||++|++|||+..+. .++ ...++++++++||+|++|+|.+++|+++|+++.|+
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~ 243 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGV-QQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFA 243 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTC-EECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHT
T ss_pred cCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCc-eeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHh
Confidence 9999999999999999999999999999999976542 122 23589999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
.||+|++|||+|||+++|+++|+++|++|++.||+||||+.||+.++|||++||+++|||+|++|.+
T Consensus 244 ~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e 310 (335)
T 2g76_A 244 QCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKE 310 (335)
T ss_dssp TSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHH
T ss_pred hCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHH
Confidence 9999999999999999999999999999999999999999999766799999999999999999865
No 20
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=2.4e-57 Score=397.03 Aligned_cols=218 Identities=15% Similarity=0.254 Sum_probs=198.1
Q ss_pred Ccc--ceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccc
Q 035615 3 CYQ--TNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFK 76 (223)
Q Consensus 3 ~p~--Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~ 76 (223)
+|+ ||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|.|.+... ..+.+
T Consensus 65 ~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~ 143 (331)
T 1xdw_A 65 YKKLGVKYILTRTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAF-MFSKE 143 (331)
T ss_dssp HHHHTCCEEEESSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCST-TCCCC
T ss_pred CcccCceEEEEccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccC-cCccC
Confidence 467 999999999999999999999998 69999999999999999999999999999999999964111 24678
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE 155 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~ 155 (223)
+.|+||||||+|.||+.+|+++++||++|++|||++.... ....+.++++++++||+|++|+|++++|+++|+++.|+.
T Consensus 144 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~ 223 (331)
T 1xdw_A 144 VRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKK 223 (331)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhh
Confidence 9999999999999999999999999999999999876431 122356899999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCC--CC--------C----CCCCC-CceEEccCCCCCCC
Q 035615 156 LGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPN--VP--------K----EPLRL-DNIVLLPCQNALTH 220 (223)
Q Consensus 156 mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~--~~--------~----~l~~~-~nv~~TPH~a~~t~ 220 (223)
||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+ ++ + |||++ |||++|||+|++|.
T Consensus 224 mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~ 303 (331)
T 1xdw_A 224 MKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTD 303 (331)
T ss_dssp SCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSH
T ss_pred CCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCccccChH
Confidence 9999999999999999999999999999999999999999994 21 2 69999 99999999999997
Q ss_pred C
Q 035615 221 W 221 (223)
Q Consensus 221 ~ 221 (223)
+
T Consensus 304 ~ 304 (331)
T 1xdw_A 304 E 304 (331)
T ss_dssp H
T ss_pred H
Confidence 5
No 21
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=3.1e-57 Score=396.65 Aligned_cols=217 Identities=20% Similarity=0.220 Sum_probs=197.2
Q ss_pred Ccc--ceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccc
Q 035615 3 CYQ--TNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFK 76 (223)
Q Consensus 3 ~p~--Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~ 76 (223)
+|+ ||||++.++|+||||+++++++|| +||+++++||||+++++|++.|++..+++.+++|.|.+.. ..+.+
T Consensus 66 ~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~--~~~~~ 143 (333)
T 1j4a_A 66 LADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAP--TIGRE 143 (333)
T ss_dssp HHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTT--CCBCC
T ss_pred ccccCCeEEEECCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCC--ccccc
Confidence 466 999999999999999999999998 6999999999999999999999999999999999996432 25678
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC--CCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS--VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~--~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
++|+||||||+|+||+.+|+++++||++|++||+++.+. ..+....++++++++||+|++|+|++++|+++++++.|+
T Consensus 144 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 144 VRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHh
Confidence 999999999999999999999999999999999987542 112223389999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCC--CC--------C----CCCCCCceEEccCCCCCCC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPN--VP--------K----EPLRLDNIVLLPCQNALTH 220 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~--~~--------~----~l~~~~nv~~TPH~a~~t~ 220 (223)
.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+ ++ + |||++|||++|||+|++|.
T Consensus 224 ~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~ 303 (333)
T 1j4a_A 224 KMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTT 303 (333)
T ss_dssp HSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBH
T ss_pred hCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccCHH
Confidence 99999999999999999999999999999999999999999993 22 2 4999999999999999997
Q ss_pred C
Q 035615 221 W 221 (223)
Q Consensus 221 ~ 221 (223)
+
T Consensus 304 ~ 304 (333)
T 1j4a_A 304 H 304 (333)
T ss_dssp H
T ss_pred H
Confidence 5
No 22
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.1e-56 Score=389.22 Aligned_cols=217 Identities=31% Similarity=0.441 Sum_probs=200.6
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCcccc
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKL 77 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l 77 (223)
.+|+||||++.++|+||||+++++++|| +||+|+.+||||+++++|++.|++..+++.+++|.|.... ..+.+|
T Consensus 63 ~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~--~~~~~l 140 (307)
T 1wwk_A 63 SAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKE--AMGIEL 140 (307)
T ss_dssp TCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTT--CCBCCC
T ss_pred hCCCCeEEEECCccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccC--cCCccc
Confidence 3799999999999999999999999998 6999999999999999999999999999999999997421 246789
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC----CCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
.|+||||||+|+||+.+|+++++||++|++|||++... .++ ...++++++++||+|++|+|.+++|+++++++.|
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l 219 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNG-KFVDLETLLKESDVVTIHVPLVESTYHLINEERL 219 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTC-EECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHH
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCc-cccCHHHHHhhCCEEEEecCCChHHhhhcCHHHH
Confidence 99999999999999999999999999999999987642 122 2358999999999999999999999999999999
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCCCceEEccCCCCCCCC
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+.||+|++|||++||+++|+++|.++|++|++.||++|||++||++. +|||++||+++|||++++|.+
T Consensus 220 ~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~ 288 (307)
T 1wwk_A 220 KLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVE 288 (307)
T ss_dssp HHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHH
T ss_pred hcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHH
Confidence 99999999999999999999999999999999999999999999854 599999999999999999865
No 23
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=3.8e-56 Score=389.46 Aligned_cols=218 Identities=41% Similarity=0.661 Sum_probs=204.4
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|.|... .+..+.+++
T Consensus 85 ~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~-~~~~~~~l~ 163 (333)
T 3ba1_A 85 LPKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFG-DFKLTTKFS 163 (333)
T ss_dssp CTTCCEEEESSSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGC-CCCCCCCCT
T ss_pred CCCCcEEEEcCccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCcc-ccccccccC
Confidence 799999999999999999999999998 799999999999999999999999999999999999742 223467899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELGK 158 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ 158 (223)
|++|||||+|+||+.+|++++++|++|++|||++....+.....++++++++||+|++|+|.+++|+++++++.++.||+
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~ 243 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGP 243 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCC
Confidence 99999999999999999999999999999999887655555567899999999999999999999999999999999999
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 159 GGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 159 ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+++|||++||.++|+++|.++|++|++.+|++|||++||++.+|||++|||++|||+|+.|.+
T Consensus 244 gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e 306 (333)
T 3ba1_A 244 KGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVE 306 (333)
T ss_dssp TCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHH
T ss_pred CCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHH
Confidence 999999999999999999999999999999999999999877899999999999999999865
No 24
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=6e-56 Score=385.16 Aligned_cols=216 Identities=28% Similarity=0.499 Sum_probs=200.0
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCC-CCCCcccc
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTG-DYPLGFKL 77 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~-~~~~~~~l 77 (223)
+|+||||++.++|+||||+++++++|| +||+|+.+||||+++++|++.|++..+++.+++|.|.... ....+.++
T Consensus 63 ~~~Lk~i~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l 142 (311)
T 2cuk_A 63 AKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDL 142 (311)
T ss_dssp STTCCEEECSSSCCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCC
T ss_pred CCCCeEEEECCcCccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCC
Confidence 799999999999999999999999998 6999999999999999999999999999999999996321 11246789
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELG 157 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk 157 (223)
.|+||||||+|+||+.+|++++++|++|++|||++.... ....++++++++||+|++|+|.+++|+++++++.++.||
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk 220 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP--YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMK 220 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS--SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSC
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc--cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCC
Confidence 999999999999999999999999999999999876654 235689999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCCCceEEccCCCCCCCC
Q 035615 158 KGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 158 ~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+|++|||+|||+++|+++|.++|+ |++.||++|||++||++. +|||++||+++|||++++|.+
T Consensus 221 ~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~ 284 (311)
T 2cuk_A 221 RGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRT 284 (311)
T ss_dssp TTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHH
T ss_pred CCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHH
Confidence 999999999999999999999999 999999999999999765 599999999999999999865
No 25
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.6e-56 Score=389.07 Aligned_cols=214 Identities=22% Similarity=0.321 Sum_probs=200.4
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||.+++.++|| +||+|+.+||||+++++|++.|++..+++.+++|.|.. ..+.++.
T Consensus 66 ~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~----~~~~~l~ 141 (313)
T 2ekl_A 66 GKKLKIIARAGIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKK----IEGLELA 141 (313)
T ss_dssp CTTCCEEEECSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC----CCCCCCT
T ss_pred CCCCeEEEEcCCCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC----CCCCCCC
Confidence 699999999999999999999999998 69999999999999999999999999999999999962 2467899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC----CCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
|+||||||+|+||+.+|++++++|++|++||+++... .+.. ..++++++++||+|++|+|.+++|+++++++.++
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~ 220 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAK-AVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFE 220 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCce-ecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHh
Confidence 9999999999999999999999999999999987642 1232 3589999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCC---CCCCCCceEEccCCCCCCCC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPK---EPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~---~l~~~~nv~~TPH~a~~t~~ 221 (223)
.||+|++|||++||+++|+++|.++|++|++.||++|||+.||++++ |||++||+++|||++++|.+
T Consensus 221 ~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~ 290 (313)
T 2ekl_A 221 LMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKE 290 (313)
T ss_dssp HSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHH
T ss_pred cCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHH
Confidence 99999999999999999999999999999999999999999998887 99999999999999999965
No 26
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=8.2e-56 Score=385.73 Aligned_cols=219 Identities=24% Similarity=0.340 Sum_probs=200.0
Q ss_pred Ccc-ceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCC-CCCCccc
Q 035615 3 CYQ-TNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTG-DYPLGFK 76 (223)
Q Consensus 3 ~p~-Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~-~~~~~~~ 76 (223)
+|+ ||||++.++|+||||+++++++|| +||+|+.+||||+++++|++.|++..+++.+++|.|.... ....+.+
T Consensus 64 ~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~ 143 (320)
T 1gdh_A 64 IPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEK 143 (320)
T ss_dssp SCTTCCEEEEESSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCC
T ss_pred CCccceEEEECCcccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcC
Confidence 689 999999999999999999999998 6999999999999999999999999999999999996321 1124678
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcC-CCCCC----CCcccccChhhhhcCCcEEEEeccCChhhhhccCHH
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSR-RKRPS----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~-~~~~~----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~ 151 (223)
+.|+||||||+|+||+.+|+++++||++|++||+ ++... .+.....++++++++||+|++|+|.+++|+++++++
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHH
Confidence 9999999999999999999999999999999999 76542 133333489999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 152 VMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 152 ~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
.++.||+|++|||++||+++|+++|.++|++|++.||++|||+.||..++|||++||+++|||++++|.+
T Consensus 224 ~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~ 293 (320)
T 1gdh_A 224 TIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQ 293 (320)
T ss_dssp HHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHH
T ss_pred HHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHH
Confidence 9999999999999999999999999999999999999999999999545699999999999999999875
No 27
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.1e-56 Score=384.85 Aligned_cols=211 Identities=18% Similarity=0.240 Sum_probs=195.0
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||++++ ++|| ++|+++.+||||+++++|++.|++..+++.+++|.|.... ...++.
T Consensus 48 ~~~Lk~I~~~~~G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~---~~~~l~ 123 (303)
T 1qp8_A 48 MPRLKFIQVVTAGLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDV---EIPLIQ 123 (303)
T ss_dssp CTTCCCEEBSSSCCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCS---CCCCCT
T ss_pred CCCCcEEEECCcCcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCC---CCCCCC
Confidence 7999999999999999999885 6887 6999999999999999999999999999999999996431 235799
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELGK 158 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ 158 (223)
|+||||||+|+||+.+|+++++||++|++|||++. ..+.....++++++++||+|++|+|.+++|+++++++.|+.||+
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~ 202 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAE 202 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCT
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-ccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCC
Confidence 99999999999999999999999999999999876 22334456899999999999999999999999999999999999
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCC-CCCCCCC-CCCCCCCceEEccCCCCC
Q 035615 159 GGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVF-ENDPNVP-KEPLRLDNIVLLPCQNAL 218 (223)
Q Consensus 159 ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~-~~EP~~~-~~l~~~~nv~~TPH~a~~ 218 (223)
|++|||+|||+++|+++|.++|++|++.||++||| ++||++. +|||++||+++|||++++
T Consensus 203 gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~ 264 (303)
T 1qp8_A 203 DAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGG 264 (303)
T ss_dssp TCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSS
T ss_pred CCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCC
Confidence 99999999999999999999999999999999999 8899875 499999999999999998
No 28
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=3.1e-55 Score=385.55 Aligned_cols=220 Identities=25% Similarity=0.365 Sum_probs=199.4
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCC-----CC
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGD-----YP 72 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~-----~~ 72 (223)
.+|+||||++.++|+||||+++++++|| +||+++++||||+++++|++.|++..+++.+++|.|..... ..
T Consensus 82 ~~~~Lk~I~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~ 161 (347)
T 1mx3_A 82 KFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVAS 161 (347)
T ss_dssp TCSSCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTT
T ss_pred hCCCCCEEEEcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccccccccccccc
Confidence 3799999999999999999999999998 69999999999999999999999999999999999963210 00
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----CcccccChhhhhcCCcEEEEeccCChhhhhcc
Q 035615 73 LGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPYCANVYDLAVNSDVLVVCCALTEQTHHII 148 (223)
Q Consensus 73 ~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li 148 (223)
.+.+++|+||||||+|+||+.+|+++++||++|++||++..+.. +.....++++++++||+|++|+|++++|+++|
T Consensus 162 ~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li 241 (347)
T 1mx3_A 162 GAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLI 241 (347)
T ss_dssp TCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSB
T ss_pred CccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHh
Confidence 12589999999999999999999999999999999998765421 23334589999999999999999999999999
Q ss_pred CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC--CCCCCCCceEEccCCCCCCCC
Q 035615 149 NKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP--KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 149 ~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~--~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+++.|+.||+|++|||++||+++|+++|+++|++|+|.||++|||+.||++. +|||.+||+++|||+|++|++
T Consensus 242 ~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~ 316 (347)
T 1mx3_A 242 NDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQ 316 (347)
T ss_dssp SHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHH
T ss_pred HHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999863 589999999999999999864
No 29
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=9.4e-55 Score=384.98 Aligned_cols=198 Identities=24% Similarity=0.298 Sum_probs=182.7
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||+++++++|| +||+|+.+||||+++++|++.|+. +.+|+
T Consensus 59 ~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~--------------------g~~l~ 118 (381)
T 3oet_A 59 GTPINFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD--------------------GFSLR 118 (381)
T ss_dssp TSCCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT--------------------TCCGG
T ss_pred CCCCEEEEEccccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc--------------------CCccC
Confidence 467999999999999999999999998 799999999999999999999862 35699
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChh----hhhccCHHHHh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQ----THHIINKDVMA 154 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~----t~~li~~~~l~ 154 (223)
|+||||||+|+||+.+|+++++|||+|++||+..........+.++++++++||+|++|+|++++ |+++++++.|+
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~ 198 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIR 198 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHh
Confidence 99999999999999999999999999999998654332333467999999999999999999999 99999999999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
.||+|++|||+|||+++|+++|+++|++|++.||+||||++||+++++||.++ +++|||+||+|.|
T Consensus 199 ~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~-~i~TPHiag~t~e 264 (381)
T 3oet_A 199 RLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV-DIGTSHIAGYTLE 264 (381)
T ss_dssp HSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS-SEECSSCTTCCHH
T ss_pred cCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC-EEECCccCcCcHH
Confidence 99999999999999999999999999999999999999999998877899875 8999999999965
No 30
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=3.6e-53 Score=372.89 Aligned_cols=219 Identities=21% Similarity=0.317 Sum_probs=198.1
Q ss_pred Cc-cceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCC---CCCCC--CCC
Q 035615 3 CY-QTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGL---WAKTG--DYP 72 (223)
Q Consensus 3 ~p-~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~---w~~~~--~~~ 72 (223)
+| +||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|. |.... ...
T Consensus 77 ~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~ 156 (348)
T 2w2k_A 77 LPSSLKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGK 156 (348)
T ss_dssp SCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHT
T ss_pred cccCceEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccc
Confidence 67 6999999999999999999999998 69999999999999999999999999999999999 94210 012
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHH-hCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhh
Q 035615 73 LGFKLGGMQVGIVRLGNIGSEVLNRLQ-AFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHH 146 (223)
Q Consensus 73 ~~~~l~g~~vgIiG~G~iG~~~a~~l~-~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~ 146 (223)
.+.+|+|+||||||+|+||+.+|++++ ++|++|++||+++...+ +.....++++++++||+|++|+|.+++|++
T Consensus 157 ~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~ 236 (348)
T 2w2k_A 157 SAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHH 236 (348)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTT
T ss_pred cCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHH
Confidence 457899999999999999999999999 99999999999875422 333334899999999999999999999999
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 147 IINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 147 li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+++++.++.||++++|||++||+++|+++|.++|++|++.||++|||++||..++|||++|||++|||+++.|.+
T Consensus 237 li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nviltPH~~~~t~e 311 (348)
T 2w2k_A 237 LIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIE 311 (348)
T ss_dssp CBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEEECCSCTTCSHH
T ss_pred HhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEEEcCcCCCCCHH
Confidence 999999999999999999999999999999999999999999999999999444589999999999999999865
No 31
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.9e-53 Score=369.52 Aligned_cols=218 Identities=29% Similarity=0.496 Sum_probs=198.1
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCc---
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLG--- 74 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~--- 74 (223)
.+|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|.|........+
T Consensus 61 ~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~ 140 (333)
T 2d0i_A 61 NAERLKVISCHSAGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKR 140 (333)
T ss_dssp TCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCC
T ss_pred hCCCceEEEECCcccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcc
Confidence 3799999999999999999999999998 699999999999999999999999999999999999631000123
Q ss_pred -cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----CcccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 75 -FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 75 -~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
.+|+|++|||||+|.||+.+|++++++|++|++||+++.... +. ...++++++++||+|++|+|.+++|+++++
T Consensus 141 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~-~~~~l~e~l~~aDiVil~vp~~~~t~~~i~ 219 (333)
T 2d0i_A 141 IESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKA-RYMDIDELLEKSDIVILALPLTRDTYHIIN 219 (333)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTE-EECCHHHHHHHCSEEEECCCCCTTTTTSBC
T ss_pred cCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCc-eecCHHHHHhhCCEEEEcCCCChHHHHHhC
Confidence 689999999999999999999999999999999999876421 22 235899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCC-ceEEccCCCCCCCC
Q 035615 150 KDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLD-NIVLLPCQNALTHW 221 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~-nv~~TPH~a~~t~~ 221 (223)
++.++.||++ +|||+|||.++|+++|.++|+++++.||++|||++||++++|||++| |+++|||+++.|.+
T Consensus 220 ~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~ 291 (333)
T 2d0i_A 220 EERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALE 291 (333)
T ss_dssp HHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHH
T ss_pred HHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHH
Confidence 9999999999 99999999999999999999999999999999999998766999999 99999999999865
No 32
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=4.6e-52 Score=363.48 Aligned_cols=217 Identities=28% Similarity=0.430 Sum_probs=198.0
Q ss_pred ccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCC-CCCCccccC
Q 035615 4 YQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTG-DYPLGFKLG 78 (223)
Q Consensus 4 p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~-~~~~~~~l~ 78 (223)
|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|.|.... ....+.++.
T Consensus 75 ~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~ 154 (330)
T 2gcg_A 75 ANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLT 154 (330)
T ss_dssp TTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCT
T ss_pred CCceEEEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCC
Confidence 99999999999999999999999998 6999999999999999999999999999999999997421 112467899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
|++|||||+|.||+.+|++++++|++|++||++..... +.. ..++++++++||+|++|+|.+++|+++++++.+
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~ 233 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAE-FVSTPELAAQSDFIVVACSLTPATEGLCNKDFF 233 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCce-eCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHH
Confidence 99999999999999999999999999999998765321 222 238999999999999999999999999999999
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCCCceEEccCCCCCCCC
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~~nv~~TPH~a~~t~~ 221 (223)
+.||++++|||++||+++|+++|.++|+++++.||++|||++||++. +|||++|||++|||+|+.|.+
T Consensus 234 ~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~ 302 (330)
T 2gcg_A 234 QKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHR 302 (330)
T ss_dssp HHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHH
T ss_pred hcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHH
Confidence 99999999999999999999999999999999999999999999765 499999999999999999854
No 33
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=2.1e-52 Score=366.25 Aligned_cols=218 Identities=31% Similarity=0.502 Sum_probs=198.1
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCC----CC-CCCCC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWA----KT-GDYPL 73 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~----~~-~~~~~ 73 (223)
+|+||||++.++|+||||+++++++|| +||+++.+||||+++++|++.|++..+++.+++|.|. .. .....
T Consensus 65 ~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~ 144 (334)
T 2dbq_A 65 APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFL 144 (334)
T ss_dssp CTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTC
T ss_pred CCCceEEEECCcccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccccccccccc
Confidence 799999999999999999999999998 6999999999999999999999999999999999996 11 11123
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----CcccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
+.++.|++|||||+|.||+.+|++++++|++|++|||++.... +. ...++++++++||+|++|+|.+++|+++++
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~-~~~~l~~~l~~aDvVil~vp~~~~t~~~i~ 223 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNA-EFKPLEDLLRESDFVVLAVPLTRETYHLIN 223 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCC-EECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCc-ccCCHHHHHhhCCEEEECCCCChHHHHhhC
Confidence 6789999999999999999999999999999999999876511 22 245899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 150 KDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
++.++.||++++|||+|||.++|+++|.++|++|++.||++|||++||...+|||.+|||++|||+|+.|.+
T Consensus 224 ~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~ 295 (334)
T 2dbq_A 224 EERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFG 295 (334)
T ss_dssp HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHH
T ss_pred HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHH
Confidence 999999999999999999999999999999999999999999999999334599999999999999999864
No 34
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-52 Score=372.33 Aligned_cols=198 Identities=19% Similarity=0.288 Sum_probs=181.6
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||||.++++++|| +||+|+.+||||+++++|++.|+ | +.+|+
T Consensus 56 ~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~------------~--------~~~l~ 115 (380)
T 2o4c_A 56 GSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEV------------R--------GADLA 115 (380)
T ss_dssp TSCCCEEEECSSCSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHH------------H--------TCCGG
T ss_pred CCCceEEEEcCcccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhh------------h--------hcccC
Confidence 699999999999999999999999998 69999999999999999999986 2 24699
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChh----hhhccCHHHHh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQ----THHIINKDVMA 154 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~----t~~li~~~~l~ 154 (223)
|+||||||+|+||+.+|+++++||++|++||++...........++++++++||+|++|+|++++ |+++++++.|+
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~ 195 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLA 195 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHh
Confidence 99999999999999999999999999999997653221112357899999999999999999999 99999999999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
.||+|++|||+|||+++|+++|+++|++|+|.+|+||||++||+++++|+.. |+++|||+||+|.+
T Consensus 196 ~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~-nvi~TPHiag~t~e 261 (380)
T 2o4c_A 196 ALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAAR-CLIATPHIAGYSLE 261 (380)
T ss_dssp TSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTT-CSEECSSCTTCCHH
T ss_pred hCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhccC-CEEEccccCcCCHH
Confidence 9999999999999999999999999999999999999999999877788874 99999999999965
No 35
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=6.4e-51 Score=376.05 Aligned_cols=216 Identities=25% Similarity=0.388 Sum_probs=199.5
Q ss_pred CccceEEEEccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
+|+||||++.++|+||+|++++.++|| +|++|+.+||||+++++|++.|+++.+++.+++|.|.+.. + .+.+|+
T Consensus 64 ~~~Lk~i~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~-~-~~~~l~ 141 (529)
T 1ygy_A 64 APKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSS-F-SGTEIF 141 (529)
T ss_dssp CTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGG-C-CBCCCT
T ss_pred CCCCcEEEECCcCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccC-c-CccccC
Confidence 799999999999999999999999998 7999999999999999999999999999999999997431 2 467899
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
|+||||||+|+||+.+|++++++|++|++||++..... ++. ..++++++++||+|++|+|.+++|+++++++.++
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~-~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~ 220 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIE-LLSLDDLLARADFISVHLPKTPETAGLIDKEALA 220 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCE-ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCcE-EcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHh
Confidence 99999999999999999999999999999998764211 232 2489999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCceEEccCCCCCCCC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNIVLLPCQNALTHW 221 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv~~TPH~a~~t~~ 221 (223)
.||+|+++||++||.++|+++|+++|++|++.||++|||+.||..++|||+++|+++|||+++.|.+
T Consensus 221 ~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~e 287 (529)
T 1ygy_A 221 KTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAE 287 (529)
T ss_dssp TSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHH
T ss_pred CCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHH
Confidence 9999999999999999999999999999999999999999999877799999999999999988754
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.98 E-value=2.3e-34 Score=260.99 Aligned_cols=193 Identities=11% Similarity=0.136 Sum_probs=165.5
Q ss_pred CccceEEE-EccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCcccc
Q 035615 3 CYQTNLYA-CILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKL 77 (223)
Q Consensus 3 ~p~Lk~i~-~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l 77 (223)
.|+++.|+ .+++|+|++ +++.++|| ++++|. +||| ++.|++....+.+++| |.+. .+.++
T Consensus 191 ~~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r~----~~~~l 255 (479)
T 1v8b_A 191 AKKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMRA----TDFLI 255 (479)
T ss_dssp HTTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHHH----HCCCC
T ss_pred hcCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhhc----ccccc
Confidence 37888888 689999998 78889998 488898 9999 4567877777888888 8632 34679
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC-----CCcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS-----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
.|++|||||+|.||+.+|+++++||++|+++|+++... .++ ...++++++++||+|++|+ .|+++|+++.
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~-~~~~l~ell~~aDiVi~~~----~t~~lI~~~~ 330 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVVTLDEIVDKGDFFITCT----GNVDVIKLEH 330 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECC----SSSSSBCHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCC-EecCHHHHHhcCCEEEECC----ChhhhcCHHH
Confidence 99999999999999999999999999999999987542 133 3568999999999999995 6899999999
Q ss_pred HhcCCCCcEEEEcCCCcc-cCHHHHHH--HHHcCCceEEEeeCCCCCCCCCCCCCCC--CceEEccCCC-CCC
Q 035615 153 MAELGKGGMIINVGRGAL-IDEKEMLQ--FLVQGDINGVGLDVFENDPNVPKEPLRL--DNIVLLPCQN-ALT 219 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~-vd~~al~~--aL~~~~i~~a~lDV~~~EP~~~~~l~~~--~nv~~TPH~a-~~t 219 (223)
|+.||+|++|||+|||++ ||+++|.+ +|++|+|. +++|||+.++ .+|||.+ ||+++| |+| +.+
T Consensus 331 l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~--~~~l~~l~~~nvv~t-H~atghp 399 (479)
T 1v8b_A 331 LLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPN--GNKIIVLARGRLLNL-GCATGHP 399 (479)
T ss_dssp HTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTT--SCEEEEEGGGSBHHH-HSSCCSC
T ss_pred HhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCC--CCeeeEecCCCEEEE-eccCCCC
Confidence 999999999999999999 99999999 99999998 8999984322 4589988 999999 999 544
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.98 E-value=1.1e-34 Score=263.89 Aligned_cols=190 Identities=14% Similarity=0.113 Sum_probs=158.3
Q ss_pred ccceEEE-EccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccC
Q 035615 4 YQTNLYA-CILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLG 78 (223)
Q Consensus 4 p~Lk~i~-~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~ 78 (223)
|+++.|+ .+++|+|++ +++.++|| ++++|. +|||+. .|++....+.+.+| |... .+.++.
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~~~----~g~~L~ 276 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IKRA----TDVMIA 276 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HHHH----HCCCCT
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hhhc----cccccC
Confidence 7889998 689999998 77889998 478999 999954 35555555555555 7532 356799
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC-----CCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS-----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
|++|||||+|.||+.+|+++++||++|++||+++... .++ ...++++++++||+|++|+ .|+++|+++.|
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~-~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l 351 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGY-RVVTMEYAADKADIFVTAT----GNYHVINHDHM 351 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECS----SSSCSBCHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCC-EeCCHHHHHhcCCEEEECC----CcccccCHHHH
Confidence 9999999999999999999999999999999987532 122 3468999999999999997 57899999999
Q ss_pred hcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCceEEEeeCCCCCCCCC-CCCCCC--CceEEccCCC-CCC
Q 035615 154 AELGKGGMIINVGRGAL-IDEKEMLQFLVQGDINGVGLDVFENDPNVP-KEPLRL--DNIVLLPCQN-ALT 219 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~-vd~~al~~aL~~~~i~~a~lDV~~~EP~~~-~~l~~~--~nv~~TPH~a-~~t 219 (223)
+.||+|++|||+|||++ ||+++| ++|++|+|+ +++| .||+++ +|||.+ ||+++| |+| +.|
T Consensus 352 ~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~D---v~plp~~~pL~~l~~~nvv~t-H~atg~~ 416 (494)
T 3d64_A 352 KAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVD---HIIFPDGKRVILLAEGRLVNL-GCATGHP 416 (494)
T ss_dssp HHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEE---EEECTTSCEEEEEGGGSBHHH-HTSCCSC
T ss_pred hhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEE---EEECCCCCchhhcCCCCEEEE-eCcCCCC
Confidence 99999999999999999 699999 999999997 4445 556654 589998 999999 999 555
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.91 E-value=1.8e-24 Score=185.68 Aligned_cols=137 Identities=17% Similarity=0.181 Sum_probs=118.0
Q ss_pred CccceEEEEccccchhHhH-HHHHhcCC----CC------CCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCC
Q 035615 3 CYQTNLYACILSEYQNWLK-QLIKQKSI----AK------QADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDY 71 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~-~~~~~~~i----~~------~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~ 71 (223)
+|+||+|+ +|+||+|+ ++++++|| ++ ++|+.+|||++++++|..
T Consensus 94 ~~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~---------------------- 148 (293)
T 3d4o_A 94 TPNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH---------------------- 148 (293)
T ss_dssp SCTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH----------------------
T ss_pred CCCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh----------------------
Confidence 78999997 89999998 89999998 35 789999999999998863
Q ss_pred CCccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc--ccChhhhhcCCcEEEEeccCChhh
Q 035615 72 PLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY--CANVYDLAVNSDVLVVCCALTEQT 144 (223)
Q Consensus 72 ~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~--~~~l~el~~~aDiv~~~~p~t~~t 144 (223)
.+.++.|++|||||+|.||+.+|++++++|++|+++||++.+.. +... ..+++++++++|+|++|+|.
T Consensus 149 -~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~---- 223 (293)
T 3d4o_A 149 -TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA---- 223 (293)
T ss_dssp -CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS----
T ss_pred -cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh----
Confidence 12468999999999999999999999999999999999865321 2221 25788999999999999995
Q ss_pred hhccCHHHHhcCCCCcEEEEcCCCcc
Q 035615 145 HHIINKDVMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~arg~~ 170 (223)
++++++.++.||+++++||++||+.
T Consensus 224 -~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 224 -LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp -CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred -HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 6889999999999999999999765
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.88 E-value=1.1e-24 Score=198.70 Aligned_cols=193 Identities=12% Similarity=0.091 Sum_probs=147.7
Q ss_pred cceEEE-EccccchhHhHHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccCC
Q 035615 5 QTNLYA-CILSEYQNWLKQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLGG 79 (223)
Q Consensus 5 ~Lk~i~-~~~aG~d~id~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~g 79 (223)
+++-+. .+++|+|++ .++.++|+ ++++|. +|||+. .|++.........+ |.+. .+..+.|
T Consensus 210 ~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~-------~r~l~~~~~s~~~g-~~r~----~~~~l~G 274 (494)
T 3ce6_A 210 SVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSK-------FDNKYGTRHSLIDG-INRG----TDALIGG 274 (494)
T ss_dssp HCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHT-------THHHHHHHHHHHHH-HHHH----HCCCCTT
T ss_pred CeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHH-------HhhhhhhhhhhhHH-HHhc----cCCCCCc
Confidence 334343 589999998 66778888 477888 999953 33333333333333 4321 1235889
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC-----CCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS-----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
++|+|+|+|.||+.+|++++++|++|+++++++.+. .++. ..+++++++.+|+|+.|++ +.++++++.++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~ 349 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTVEEAIGDADIVVTATG----NKDIIMLEHIK 349 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECSS----SSCSBCHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecHHHHHhCCCEEEECCC----CHHHHHHHHHH
Confidence 999999999999999999999999999999987542 2332 4578899999999999975 56688889999
Q ss_pred cCCCCcEEEEcCCCcc-cCHHHHHH-HHHcCCceEEEeeCCCCCCCCCC--CCCCCCceE----EccCCCCCC
Q 035615 155 ELGKGGMIINVGRGAL-IDEKEMLQ-FLVQGDINGVGLDVFENDPNVPK--EPLRLDNIV----LLPCQNALT 219 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~-vd~~al~~-aL~~~~i~~a~lDV~~~EP~~~~--~l~~~~nv~----~TPH~a~~t 219 (223)
.||++++++|++|+.. +|+++|.+ +|+++++. +.+|+|+.++. .. .++..+|++ +|||+++.+
T Consensus 350 ~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~-~~~l~LL~~grlvnL~~~TPH~a~~~ 420 (494)
T 3ce6_A 350 AMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT-GRSIIVLSEGRLLNLGNATGHPSFVM 420 (494)
T ss_dssp HSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT-CCEEEEEGGGSCHHHHHSCCSCHHHH
T ss_pred hcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc-chHHHHHhCCCEEeccCCCCCccccc
Confidence 9999999999999999 99999998 88888887 67899876432 23 467778888 999997644
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.84 E-value=1.5e-21 Score=173.11 Aligned_cols=188 Identities=10% Similarity=0.121 Sum_probs=141.5
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCCC-------C--CCC---cchHHHHHHHHHHHHH-hCCcHHHHHHHcCCCCCC
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSIA-------K--QAD---LPIVADLAIGLLIDFL-RRISPGNWYVRAGLWAKT 68 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i~-------~--~~~---~~~vAE~~~~~~l~~~-r~~~~~~~~~~~~~w~~~ 68 (223)
++|+..++.....++|..+++.+.++|++ + ..+ -.++||++..+++.+. |++.. ...|+|...
T Consensus 85 l~~~~~l~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s~~ae~ag~~a~~~a~r~l~~----~~~g~~~~~ 160 (377)
T 2vhw_A 85 LRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPMSEVAGRLAAQVGAYHLMR----TQGGRGVLM 160 (377)
T ss_dssp CCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHHHTSG----GGTSCCCCT
T ss_pred cCCCCEEEEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCccccCchHHHHHHHHHHHHHHHHHH----hcCCCcccc
Confidence 46776677767788999999999998872 1 012 2467899985554444 76633 334443322
Q ss_pred CCCCCccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------Ccc------cccChhhhhcCCcEEEE
Q 035615 69 GDYPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFP------YCANVYDLAVNSDVLVV 136 (223)
Q Consensus 69 ~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~------~~~~l~el~~~aDiv~~ 136 (223)
. ...++.|++|+|+|+|.||+.+++.++++|++|+++|+++.+.+ +.. ...+++++++.+|+|+.
T Consensus 161 ~---~~~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 161 G---GVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp T---CBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred c---CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEE
Confidence 1 12368999999999999999999999999999999998865421 111 13457788899999999
Q ss_pred ec--cCChhhhhccCHHHHhcCCCCcEEEEcC--CCcccCHHHHHHHHHcCCceEEEeeCCCC-CCCCC-CCCCCCCceE
Q 035615 137 CC--ALTEQTHHIINKDVMAELGKGGMIINVG--RGALIDEKEMLQFLVQGDINGVGLDVFEN-DPNVP-KEPLRLDNIV 210 (223)
Q Consensus 137 ~~--p~t~~t~~li~~~~l~~mk~ga~lIN~a--rg~~vd~~al~~aL~~~~i~~a~lDV~~~-EP~~~-~~l~~~~nv~ 210 (223)
++ |.+ ++.++++++.++.||+|+++||++ +|+ ||+. ||.+. .|+|..+|++
T Consensus 238 ~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~ 294 (377)
T 2vhw_A 238 AVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTL 294 (377)
T ss_dssp CCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEE
T ss_pred CCCcCCC-CCcceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEE
Confidence 77 544 678899999999999999999999 332 7887 88654 4899999998
Q ss_pred --EccCCCCCC
Q 035615 211 --LLPCQNALT 219 (223)
Q Consensus 211 --~TPH~a~~t 219 (223)
.|||+++.+
T Consensus 295 i~~~phl~~~~ 305 (377)
T 2vhw_A 295 FYCVANMPASV 305 (377)
T ss_dssp EECBTTGGGGS
T ss_pred EEecCCcchhh
Confidence 999999876
No 41
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.84 E-value=3.4e-21 Score=165.67 Aligned_cols=144 Identities=14% Similarity=0.159 Sum_probs=112.0
Q ss_pred CCccceEEEEccccchhHh-HHHHHhcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccc
Q 035615 2 LCYQTNLYACILSEYQNWL-KQLIKQKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFK 76 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id-~~~~~~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~ 76 (223)
.+|++|+|+ +|+||+| ++++.++|| +|+++ ++ ++.|+++.. +|.|..... ..+.+
T Consensus 95 ~~~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~~~~~~~-~~~~~ 154 (300)
T 2rir_A 95 RTPAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGTIMLAIQ-HTDYT 154 (300)
T ss_dssp TSCTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHHHHHHHH-TCSSC
T ss_pred hcCCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHHHHHHHH-hcCCC
Confidence 378999987 8999999 899999998 35553 23 234544333 334531100 13567
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccc--cccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFP--YCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~--~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
+.|+||||||+|.||+.+|++++++|++|+++||++++.. +.. ...++++++++||+|++|+|. ++++
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~ 229 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-----MILN 229 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-----CCBC
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-----hhhC
Confidence 9999999999999999999999999999999999864321 222 135788999999999999995 6889
Q ss_pred HHHHhcCCCCcEEEEcCCCcc
Q 035615 150 KDVMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~ 170 (223)
++.++.||+++++||++||+.
T Consensus 230 ~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 230 QTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp HHHHTTSCTTCEEEECSSTTC
T ss_pred HHHHHhCCCCCEEEEEeCCCC
Confidence 999999999999999999864
No 42
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.82 E-value=2.2e-22 Score=180.25 Aligned_cols=131 Identities=21% Similarity=0.236 Sum_probs=105.0
Q ss_pred ccc-cCCCEEEEEecChHHHHHHHHHHh-CCCEEEEEcCCCCCCCCcccccChhhhhcCCcE-EEEeccCChhhhhccCH
Q 035615 74 GFK-LGGMQVGIVRLGNIGSEVLNRLQA-FGFIISYNSRRKRPSVLFPYCANVYDLAVNSDV-LVVCCALTEQTHHIINK 150 (223)
Q Consensus 74 ~~~-l~g~~vgIiG~G~iG~~~a~~l~~-~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDi-v~~~~p~t~~t~~li~~ 150 (223)
+.+ |+|+||||+|+|+||+.+|+++++ ||++|++++++...... ....+++++++.+|. .++ +|+ ++|++ ++.
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~-~~gvdl~~L~~~~d~~~~l-~~l-~~t~~-i~~ 281 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYN-PDGLNADEVLKWKNEHGSV-KDF-PGATN-ITN 281 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEE-EEEECHHHHHHHHHHHSSS-TTC-TTSEE-ECH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccC-ccCCCHHHHHHHHHhcCEe-ecC-ccCee-eCH
Confidence 345 999999999999999999999999 99999998544321111 112367777665543 222 566 57788 788
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCC--CCCCCCceEEccCC
Q 035615 151 DVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPK--EPLRLDNIVLLPCQ 215 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~--~l~~~~nv~~TPH~ 215 (223)
+.|..||+ .+|||++||.+||+++ +++|+.+.|.+++ +||++++ +||.++||++|||+
T Consensus 282 ~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhi 341 (419)
T 1gtm_A 282 EELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDF 341 (419)
T ss_dssp HHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHH
T ss_pred HHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECch
Confidence 89999998 5999999999999999 6999999999877 8997653 89999999999999
No 43
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.73 E-value=2.5e-18 Score=153.81 Aligned_cols=100 Identities=16% Similarity=0.189 Sum_probs=87.1
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC-----CCcccccChhhhhcCCcEEEEeccCChhhhhcc
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS-----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHII 148 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li 148 (223)
+.++.|||++|+|+|.||+.+|+++++||++|+++++++... .++ ...++++++++||+|+++. .|.++|
T Consensus 242 g~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~-~vv~LeElL~~ADIVv~at----gt~~lI 316 (464)
T 3n58_A 242 DVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGF-EVVTLDDAASTADIVVTTT----GNKDVI 316 (464)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTC-EECCHHHHGGGCSEEEECC----SSSSSB
T ss_pred CCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCc-eeccHHHHHhhCCEEEECC----CCcccc
Confidence 346999999999999999999999999999999998876432 122 3468999999999999864 478999
Q ss_pred CHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH
Q 035615 149 NKDVMAELGKGGMIINVGRGAL-IDEKEMLQ 178 (223)
Q Consensus 149 ~~~~l~~mk~ga~lIN~arg~~-vd~~al~~ 178 (223)
+++.|+.||+|++|||+|||.. +|.++|.+
T Consensus 317 ~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp CHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred CHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 9999999999999999999998 99999874
No 44
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.71 E-value=1.2e-17 Score=149.33 Aligned_cols=102 Identities=15% Similarity=0.200 Sum_probs=88.2
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----CcccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
+.++.|++|||+|+|.||+.+|++|+++|++|+++++++.... ......+++|++++||+|++ ++.|.++|+
T Consensus 206 g~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVil----t~gt~~iI~ 281 (436)
T 3h9u_A 206 DVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVT----TTGNDDIIT 281 (436)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE----CSSCSCSBC
T ss_pred CCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEE----CCCCcCccC
Confidence 3568999999999999999999999999999999999764321 11235689999999999996 346789999
Q ss_pred HHHHhcCCCCcEEEEcCCCcc-cCHHHHHHH
Q 035615 150 KDVMAELGKGGMIINVGRGAL-IDEKEMLQF 179 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~-vd~~al~~a 179 (223)
++.|+.||+|++|||+|||.+ ||.++|.+.
T Consensus 282 ~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 282 SEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp TTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred HHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 999999999999999999997 999999864
No 45
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.70 E-value=3.3e-18 Score=152.78 Aligned_cols=170 Identities=14% Similarity=0.143 Sum_probs=120.5
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCCCCCCCcchHHHHHHHHHHHHHhCCcHH--HHHHHcCCCCCCCCCC-C---cc
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSIAKQADLPIVADLAIGLLIDFLRRISPG--NWYVRAGLWAKTGDYP-L---GF 75 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i~~~~~~~~vAE~~~~~~l~~~r~~~~~--~~~~~~~~w~~~~~~~-~---~~ 75 (223)
+.|++++|.....|+|++|++++.++||+- .+.+.|+|++.++.|.+++.+... +..++.+.|.....+. . ..
T Consensus 90 l~~~~~li~~~~~~~d~~~~~al~~~gI~v-~~~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g 168 (401)
T 1x13_A 90 LNPGTTLVSFIWPAQNPELMQKLAERNVTV-MAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAG 168 (401)
T ss_dssp CCTTCEEEECCCGGGCHHHHHHHHHTTCEE-EEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTE
T ss_pred hcCCCcEEEEecCCCCHHHHHHHHHCCCEE-EEeehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeecc
Confidence 458999999999999999999999999954 445666665555432222222211 2233333221100000 0 11
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccccc---------------------------cC
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYC---------------------------AN 123 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~---------------------------~~ 123 (223)
++.|++|+|+|+|.||..+++.++++|++|+++|+++...+ +.... .+
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 58899999999999999999999999999999999875421 22111 13
Q ss_pred hhhhhcCCcEEEEe--ccCChhhhhccCHHHHhcCCCCcEEEEcC--CCcccCH
Q 035615 124 VYDLAVNSDVLVVC--CALTEQTHHIINKDVMAELGKGGMIINVG--RGALIDE 173 (223)
Q Consensus 124 l~el~~~aDiv~~~--~p~t~~t~~li~~~~l~~mk~ga~lIN~a--rg~~vd~ 173 (223)
++++++.+|+|+.+ +|.. .+..+++++.++.||+|+++||++ ||+.+++
T Consensus 249 l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 67888899999999 4532 356788999999999999999999 9888765
No 46
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.69 E-value=1.5e-17 Score=146.82 Aligned_cols=190 Identities=13% Similarity=0.183 Sum_probs=121.3
Q ss_pred CCccceEEEEccccchhHhHHHHHhcCCC-------CCC-Cc----chHHHHHH--HHHHHHHhCCcHHHHHHHcCCCCC
Q 035615 2 LCYQTNLYACILSEYQNWLKQLIKQKSIA-------KQA-DL----PIVADLAI--GLLIDFLRRISPGNWYVRAGLWAK 67 (223)
Q Consensus 2 ~~p~Lk~i~~~~aG~d~id~~~~~~~~i~-------~~~-~~----~~vAE~~~--~~~l~~~r~~~~~~~~~~~~~w~~ 67 (223)
+.|+.++|.....+.|..+++.+.++|++ +.. .. .+++|.+- +.++++ +.+..... .++.|..
T Consensus 83 l~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~-~~l~~~~~--g~~~~~~ 159 (369)
T 2eez_A 83 LREGLILFTYLHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGA-QFLEKPKG--GRGVLLG 159 (369)
T ss_dssp CCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHH-HHTSGGGT--SCCCCTT
T ss_pred cCCCcEEEEEecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHH-HHHHHhcC--CCceecC
Confidence 35888999999999999999999999982 221 11 34454443 333332 22332211 1112221
Q ss_pred CCCCCCccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------Ccc------cccChhhhhcCCcEEE
Q 035615 68 TGDYPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFP------YCANVYDLAVNSDVLV 135 (223)
Q Consensus 68 ~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~------~~~~l~el~~~aDiv~ 135 (223)
...++.+++|+|+|.|.||+.+++.++++|++|+++|+++.+.+ +.. ...+++++++.+|+|+
T Consensus 160 -----~~~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 160 -----GVPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp -----CBTBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEE
T ss_pred -----CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEE
Confidence 12468999999999999999999999999999999998764321 111 1245677888999999
Q ss_pred EeccCCh-hhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCC-CCCCCCCCceE---
Q 035615 136 VCCALTE-QTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNV-PKEPLRLDNIV--- 210 (223)
Q Consensus 136 ~~~p~t~-~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~-~~~l~~~~nv~--- 210 (223)
.+++... .+..++.++.++.||+++++||++-. .| |+ +|++ ||.+ +.|++..+++.
T Consensus 235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~ 295 (369)
T 2eez_A 235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYG 295 (369)
T ss_dssp ECCC-------CCSCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEEC
T ss_pred ECCCCCccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEe
Confidence 9998665 57788899999999999999999821 12 44 8998 6644 45888899999
Q ss_pred ------EccCCCCC
Q 035615 211 ------LLPCQNAL 218 (223)
Q Consensus 211 ------~TPH~a~~ 218 (223)
.|||+|+.
T Consensus 296 v~~lp~~~p~~as~ 309 (369)
T 2eez_A 296 VANMPGAVPRTSTF 309 (369)
T ss_dssp CSCSGGGSHHHHHH
T ss_pred eCCcchhcHHHHHH
Confidence 88997753
No 47
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.65 E-value=1.1e-16 Score=142.97 Aligned_cols=98 Identities=17% Similarity=0.358 Sum_probs=84.9
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC-----CCcccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS-----VLFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
..+.|++++|+|+|.||+.+|+++++||++|+++++++... .++ ...+++++++++|+|++| +.|.++|+
T Consensus 216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~-~v~~Leeal~~ADIVi~a----tgt~~lI~ 290 (435)
T 3gvp_A 216 MMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGF-RLVKLNEVIRQVDIVITC----TGNKNVVT 290 (435)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCHHHHTTTCSEEEEC----SSCSCSBC
T ss_pred ceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCC-EeccHHHHHhcCCEEEEC----CCCcccCC
Confidence 46899999999999999999999999999999999876321 122 356899999999999995 35789999
Q ss_pred HHHHhcCCCCcEEEEcCCCcc-cCHHHHH
Q 035615 150 KDVMAELGKGGMIINVGRGAL-IDEKEML 177 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~-vd~~al~ 177 (223)
++.|+.||+|++|||+|||.. +|.++|.
T Consensus 291 ~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 291 REHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp HHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred HHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 999999999999999999998 7877764
No 48
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.59 E-value=4.7e-15 Score=127.35 Aligned_cols=112 Identities=13% Similarity=0.193 Sum_probs=94.9
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
.++|||||+|.||..+|++|...|++|++|||++++.+ +.....++.|+++.||+|++++|..+..+.++..+.+
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~ 84 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELV 84 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHH
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHH
Confidence 36899999999999999999999999999999887654 3445689999999999999999988888888888899
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeC
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDV 192 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV 192 (223)
..++++.++|+++....-+...+.+.+++..+. ++|.
T Consensus 85 ~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~lda 121 (297)
T 4gbj_A 85 EKLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVGA 121 (297)
T ss_dssp HHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hhcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eecC
Confidence 999999999999999999999999999999887 6774
No 49
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.58 E-value=1.7e-15 Score=130.31 Aligned_cols=111 Identities=13% Similarity=0.220 Sum_probs=97.7
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccC--HHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN--KDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~--~~~ 152 (223)
++||+||+|.||..||++|...|++|.+|||++++.+ ++....++.|+++.||+|++|+|..+..+.++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 5899999999999999999999999999999976543 556678999999999999999998888887763 347
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeC
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDV 192 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV 192 (223)
++.+++|.++||++....-+...+.+.+++..+. ++|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEec
Confidence 7889999999999999999999999999999887 7784
No 50
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.55 E-value=5.4e-17 Score=144.99 Aligned_cols=184 Identities=16% Similarity=0.151 Sum_probs=130.5
Q ss_pred CccceEEEEccccchhHhHHHHH-----hcCC----CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCC-CC
Q 035615 3 CYQTNLYACILSEYQNWLKQLIK-----QKSI----AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGD-YP 72 (223)
Q Consensus 3 ~p~Lk~i~~~~aG~d~id~~~~~-----~~~i----~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~-~~ 72 (223)
.+.+++|..+++|+|++++.+.. +.++ .+|. ..+++++.+..++.+.|++...... ..+.|..... ..
T Consensus 79 ~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~-~~~~~s~a~~av~ 156 (404)
T 1gpj_A 79 SEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRI-SEGAVSIGSAAVE 156 (404)
T ss_dssp HHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSST-TCSCCSHHHHHHH
T ss_pred chHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhh-cCCCccHHHHHHH
Confidence 46678888999999999876554 4444 3566 5789999999999999987554322 2334421000 00
Q ss_pred Cc----cccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC------Ccc--cccChhhhhcCCcEEEEecc
Q 035615 73 LG----FKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV------LFP--YCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 73 ~~----~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~------~~~--~~~~l~el~~~aDiv~~~~p 139 (223)
.. .++.|++|+|+|+|.||+.+++.++.+|+ +|++++|+..+.. +.. ...++.+++..+|+|+.|+|
T Consensus 157 ~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~ 236 (404)
T 1gpj_A 157 LAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATA 236 (404)
T ss_dssp HHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCS
T ss_pred HHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccC
Confidence 11 14789999999999999999999999999 8999999875421 221 23467788899999999987
Q ss_pred CChhhhhccCHHHHhc--CC----CCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCC-CCCCCCCCceEE-
Q 035615 140 LTEQTHHIINKDVMAE--LG----KGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNV-PKEPLRLDNIVL- 211 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~--mk----~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~-~~~l~~~~nv~~- 211 (223)
.+ ..+++++.++. || ++.++||++ +|.. +++++++|||++
T Consensus 237 ~~---~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~ 284 (404)
T 1gpj_A 237 AP---HPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVR 284 (404)
T ss_dssp SS---SCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEE
T ss_pred CC---CceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEE
Confidence 43 56677777776 42 445666654 3543 458999999999
Q ss_pred -ccCCCCCCC
Q 035615 212 -LPCQNALTH 220 (223)
Q Consensus 212 -TPH~a~~t~ 220 (223)
+||++..+.
T Consensus 285 d~d~l~~~~~ 294 (404)
T 1gpj_A 285 TIDDLRVIAR 294 (404)
T ss_dssp EHHHHHHHHH
T ss_pred eHhhHHHHHH
Confidence 999876543
No 51
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.54 E-value=1.5e-14 Score=128.28 Aligned_cols=166 Identities=11% Similarity=0.134 Sum_probs=109.3
Q ss_pred ccceEEEEccccchhHhHHHHHhcCCCC---CCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCC---CCCCCc-cc
Q 035615 4 YQTNLYACILSEYQNWLKQLIKQKSIAK---QADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKT---GDYPLG-FK 76 (223)
Q Consensus 4 p~Lk~i~~~~aG~d~id~~~~~~~~i~~---~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~---~~~~~~-~~ 76 (223)
|.+++|.....+.|+.+++++.++||+- ......+++..+. +|+..+.+ ..+..+..+.|... +.+..+ .+
T Consensus 92 ~~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~e~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~ 169 (384)
T 1l7d_A 92 EGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGT 169 (384)
T ss_dssp TTCEEEEECCGGGCHHHHHHHHHTTCEEEEGGGCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEE
T ss_pred cCCEEEEEecccCCHHHHHHHHHCCCEEEEeccccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCC
Confidence 5688998899999999999999999831 1111111111222 12222221 11222222222100 000001 36
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccccc---c--------------------------
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYC---A-------------------------- 122 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~---~-------------------------- 122 (223)
+.|++|+|+|.|.||+.+++.++++|++|+++|+++...+ +.... .
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 8999999999999999999999999999999999875421 21111 0
Q ss_pred ChhhhhcCCcEEEEec--cCChhhhhccCHHHHhcCCCCcEEEEcC--CCcccC
Q 035615 123 NVYDLAVNSDVLVVCC--ALTEQTHHIINKDVMAELGKGGMIINVG--RGALID 172 (223)
Q Consensus 123 ~l~el~~~aDiv~~~~--p~t~~t~~li~~~~l~~mk~ga~lIN~a--rg~~vd 172 (223)
.++++++.+|+|+.++ |.+ .+..+++++.++.||+|+++||++ ||+.++
T Consensus 250 ~l~~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~~ 302 (384)
T 1l7d_A 250 AVLKELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP 302 (384)
T ss_dssp HHHHHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred HHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCee
Confidence 1677889999999877 433 245688999999999999999999 876543
No 52
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.52 E-value=3.5e-14 Score=122.48 Aligned_cols=137 Identities=12% Similarity=0.105 Sum_probs=92.2
Q ss_pred HHHHHcCCCCCCCCCCCccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCC--CCC-----CCcccccChhhhh
Q 035615 57 NWYVRAGLWAKTGDYPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRK--RPS-----VLFPYCANVYDLA 128 (223)
Q Consensus 57 ~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~--~~~-----~~~~~~~~l~el~ 128 (223)
++..+.+.|..+..++.......++|||||+|.||+.+|+.|...|+ +|.+|||++ ... .+.....++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 45567777776655544444556899999999999999999999999 999999973 221 2444567889999
Q ss_pred cCCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC--CceEEEee--CCCCCC
Q 035615 129 VNSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG--DINGVGLD--VFENDP 197 (223)
Q Consensus 129 ~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~--~i~~a~lD--V~~~EP 197 (223)
++||+|++++|.....+. + ++..+.++++.++||+++.......++.+.+.+. .+. ++| |+.++|
T Consensus 82 ~~aDvVi~~vp~~~~~~~-~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~--~vd~pv~g~~~ 150 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALEV-A-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQ--YAAVAVMSAVK 150 (312)
T ss_dssp HHCSEEEECSCTTTHHHH-H-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCE--EEEEEECSCST
T ss_pred hcCCEEEEecCchhHHHH-H-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCe--EEeccccCCch
Confidence 999999999997655543 3 6677889999999999999999999999999876 454 555 455443
No 53
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.50 E-value=3.3e-14 Score=123.02 Aligned_cols=114 Identities=14% Similarity=0.161 Sum_probs=96.4
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCH-
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINK- 150 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~- 150 (223)
...++|||||+|.||+.+|+.|...|++|.+|||+++..+ +.....++++++++||+|++++|....++.++..
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 4567999999999999999999999999999999875422 4445678999999999999999977677776643
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeC
Q 035615 151 DVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDV 192 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV 192 (223)
+.++.++++.++||++++...+.+.+.+.+++..+. ++|.
T Consensus 109 ~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~~ 148 (320)
T 4dll_A 109 GVAAAMKPGSLFLDMASITPREARDHAARLGALGIA--HLDT 148 (320)
T ss_dssp CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE--EEeC
Confidence 567789999999999999999999999999988776 4553
No 54
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.50 E-value=1.7e-14 Score=124.16 Aligned_cols=115 Identities=14% Similarity=0.095 Sum_probs=96.6
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCH
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINK 150 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~ 150 (223)
++..++|||||+|.||+.+|+.|...|++|.+|||+++..+ +.....++++++++||+|++++|....++.++.+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 45678999999999999999999999999999999875432 3444678999999999999999977777877753
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeC
Q 035615 151 DVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDV 192 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV 192 (223)
+.+..++++.++||+++....+...+.+.+++..+. ++|.
T Consensus 86 ~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~--~vda 125 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH--YVKG 125 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE--EEEE
T ss_pred cchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe--EEec
Confidence 345667899999999999999999999999887776 5663
No 55
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.50 E-value=5.8e-14 Score=120.89 Aligned_cols=116 Identities=12% Similarity=0.107 Sum_probs=95.9
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhcc
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHII 148 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li 148 (223)
.....-++|||||+|.||+.+|+.|...|++|.+|||++.... +.....++++++++||+|++++|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 3445568999999999999999999999999999999876543 34446789999999999999999766777665
Q ss_pred --CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEee
Q 035615 149 --NKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLD 191 (223)
Q Consensus 149 --~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lD 191 (223)
.++.+..++++.++||+++......+.+.+.+.+..+. ++|
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~v~ 138 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR--FVE 138 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 24566789999999999999999999999999887665 455
No 56
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.47 E-value=7.5e-14 Score=119.44 Aligned_cols=109 Identities=17% Similarity=0.223 Sum_probs=94.1
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
.++|||||+|.||+.+|+.|...|++|.+|||+++..+ +.....+++++++ +|+|++++|..+.++.++ ++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 46899999999999999999999999999999887643 3445678999999 999999999777777777 6778
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEee
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLD 191 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lD 191 (223)
+.++++.++||+++......+.+.+.+.+..+. ++|
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~ 128 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIH--IVD 128 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE--EEE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 889999999999999999999999999887665 455
No 57
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.46 E-value=9.8e-14 Score=117.95 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=93.7
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhcc--CHHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHII--NKDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li--~~~~ 152 (223)
++|||||+|.||+.+|+.|...|++|.+|||+++..+ +.....+++++++++|+|++++|....++.++ +++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999999876543 34456789999999999999999766777766 2456
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEee
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLD 191 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lD 191 (223)
++.++++.++||+++....+...+.+.+++..+. ++|
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~ 118 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR--FLE 118 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE--EEE
Confidence 7789999999999999999999999999887665 455
No 58
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.45 E-value=1.2e-13 Score=121.39 Aligned_cols=117 Identities=14% Similarity=0.215 Sum_probs=97.2
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCC---cEEEEeccCChhhhhcc
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNS---DVLVVCCALTEQTHHII 148 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~a---Div~~~~p~t~~t~~li 148 (223)
+++++|||||+|.||+.+|+.|...|++|.+|||++.... +.....+++++++.+ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 5689999999999999999999999999999999875422 344567899999888 9999999976 777776
Q ss_pred CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCC
Q 035615 149 NKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFEN 195 (223)
Q Consensus 149 ~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~ 195 (223)
.+.+..++++.+|||++++...+...+.+.+++..+......|+..
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 5677889999999999999999999999999998887444445443
No 59
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.43 E-value=1.8e-13 Score=117.39 Aligned_cols=111 Identities=20% Similarity=0.189 Sum_probs=92.9
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc-ccChhhhhcCCcEEEEeccCChhhhhccC--H
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY-CANVYDLAVNSDVLVVCCALTEQTHHIIN--K 150 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~-~~~l~el~~~aDiv~~~~p~t~~t~~li~--~ 150 (223)
.++|||||+|.||+.+|+.|...|++|.+|||+++..+ +... ..+++++++.||+|++++|....++.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 47899999999999999999999999999999875432 3334 57889999999999999997667777652 4
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEee
Q 035615 151 DVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLD 191 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lD 191 (223)
+.++.++++.++||+++......+.+.+.+.+..+. ++|
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~ 125 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN--MLD 125 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE--EEE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe--EEe
Confidence 566789999999999999998899999999887665 555
No 60
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.43 E-value=1.5e-13 Score=116.78 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=93.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhcc--CHHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHII--NKDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li--~~~~ 152 (223)
++|||||+|.||+.+|+.|...|++|.+|||+++..+ +.....++++++++||+|++++|..+.++.++ .++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4799999999999999999999999999999876543 34446789999999999999999766777765 2456
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeC
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDV 192 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV 192 (223)
++.++++.++||++++...+.+.+.+.+.+..+. ++|.
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~~~~ 119 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR--FLEA 119 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEEC
Confidence 6788999999999999999999999999887665 5553
No 61
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.42 E-value=4.6e-13 Score=115.76 Aligned_cols=115 Identities=10% Similarity=0.023 Sum_probs=92.2
Q ss_pred CCEEEEEecChHHHHHHHHHHhCC-CEEEEEcCCCCCC------------CCccccc-ChhhhhcCCcEEEEeccCChhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFG-FIISYNSRRKRPS------------VLFPYCA-NVYDLAVNSDVLVVCCALTEQT 144 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~------------~~~~~~~-~l~el~~~aDiv~~~~p~t~~t 144 (223)
.++|||||+|.||..+|+.|...| ++|++|||++... .+. .. ++++++++||+|++++|.....
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~ 101 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATK 101 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHH
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHH
Confidence 478999999999999999999999 9999999986211 122 45 7889999999999999976655
Q ss_pred hhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCC
Q 035615 145 HHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDP 197 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP 197 (223)
+.+ ++....++++.++||+++......+.+.+.+++..+.....-|+.++|
T Consensus 102 ~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~ 152 (317)
T 4ezb_A 102 AVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVP 152 (317)
T ss_dssp HHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCST
T ss_pred HHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCch
Confidence 544 677788999999999999999999999999988766532223555433
No 62
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.40 E-value=3.8e-13 Score=114.94 Aligned_cols=110 Identities=13% Similarity=0.222 Sum_probs=92.4
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccC--HHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN--KDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~--~~~ 152 (223)
++|+|||+|.||+.+|+.|...|++|.+|||+++..+ +.....+++++++++|+|++++|....++.++. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999875432 444567899999999999999997767777663 256
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEee
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLD 191 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lD 191 (223)
++.++++.++||++++.....+.+.+.+.+..+. ++|
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~--~~~ 120 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLD 120 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC--EEE
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE--EEE
Confidence 6789999999999999999888999999886665 455
No 63
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.39 E-value=1.6e-12 Score=109.92 Aligned_cols=134 Identities=13% Similarity=0.140 Sum_probs=98.6
Q ss_pred CEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC-----Ccc--cccChhhhhc-CCcEEEEeccCChhhhhccC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV-----LFP--YCANVYDLAV-NSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~-----~~~--~~~~l~el~~-~aDiv~~~~p~t~~t~~li~ 149 (223)
++|+|||+|.||+.+++.|+..|+ +|+++|++++... +.. ...+++++++ ++|+|++++|.. .+..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 79 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA- 79 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHH-
Confidence 589999999999999999999998 9999998764321 222 2457888899 999999999944 455555
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCC---CC-CCCCCCCceEEccCCCC
Q 035615 150 KDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPN---VP-KEPLRLDNIVLLPCQNA 217 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~---~~-~~l~~~~nv~~TPH~a~ 217 (223)
.+..+.+++++++++++++.....+.+.+.+.++-+. ..-++..|.. .. .+++...+++++||.++
T Consensus 80 ~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~--~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~ 149 (281)
T 2g5c_A 80 KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVG--GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKT 149 (281)
T ss_dssp HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEEC--EEEECCCSCCSGGGCCSSTTTTCEEEECCCSSS
T ss_pred HHHHhhCCCCcEEEECCCCcHHHHHHHHHhcccccee--eccccCCccCChhhhhhHHhCCCCEEEecCCCC
Confidence 3466678999999999998876677888888764111 1234444431 11 25777788999999764
No 64
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.39 E-value=1.6e-12 Score=112.37 Aligned_cols=137 Identities=15% Similarity=0.155 Sum_probs=99.2
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC-----Cc--ccccChhh-hhcCCcEEEEeccCChhhh
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV-----LF--PYCANVYD-LAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~-----~~--~~~~~l~e-l~~~aDiv~~~~p~t~~t~ 145 (223)
++..++|||||+|.||+.+|+.|+..|+ +|++||++++..+ +. ....++++ ++++||+|++++|.. .+.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHH
Confidence 4456899999999999999999999999 9999999875322 22 22467788 899999999999955 344
Q ss_pred hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCC---CC-CCCCCCCceEEccCCC
Q 035615 146 HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPN---VP-KEPLRLDNIVLLPCQN 216 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~---~~-~~l~~~~nv~~TPH~a 216 (223)
.++ ++....+++++++++++.......+++.+.+.. ++.+ .-=++..|-. .. ..|+.-..+++||+-+
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~-~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~ 180 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVG-GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKK 180 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEEC-EEECCCCCCCSGGGCCTTTTTTCEEEECCCTT
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEe-cCcccCCcccchhhhhhhhhcCCEEEEEeCCC
Confidence 555 567777999999999988776556667776654 2221 1224444321 11 2677888899999843
No 65
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.38 E-value=1.9e-12 Score=113.53 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=86.5
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC-----CCcccccChhhhhc-CCcEEEEeccCChhhhhccC
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS-----VLFPYCANVYDLAV-NSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~-~aDiv~~~~p~t~~t~~li~ 149 (223)
+|.||||+|+|+|+||+.+|++++.+|++|+++|+++... .++ ...+.++++. +||+++.| .+.++|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga-~~v~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGH-TAVALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCC-EEeChHHhhcCccceecHh-----HHHhhcC
Confidence 6899999999999999999999999999999998765321 122 2346778887 99999743 4788999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 150 KDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
++.++.|| ..+++|.+|+++.++++ .++|+++++.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 68999999999999888 5899988876
No 66
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.34 E-value=5.1e-12 Score=108.15 Aligned_cols=136 Identities=17% Similarity=0.126 Sum_probs=90.5
Q ss_pred HHHHHHHcCCCCCCCCCCCccccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcE
Q 035615 55 PGNWYVRAGLWAKTGDYPLGFKLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDV 133 (223)
Q Consensus 55 ~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDi 133 (223)
++...+++..|.... ...++|+||| +|.||+.+|+.|+..|++|.+++|++. .+..+.+++||+
T Consensus 4 ~~~~~~~~~~~~~~~-------~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~--------~~~~~~~~~aDv 68 (298)
T 2pv7_A 4 ESYANENQFGFKTIN-------SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW--------AVAESILANADV 68 (298)
T ss_dssp ---------CCCCSC-------TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG--------GGHHHHHTTCSE
T ss_pred hHHhhhhccCccccC-------CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc--------cCHHHHhcCCCE
Confidence 445566677886321 1256899999 999999999999999999999998753 257788999999
Q ss_pred EEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCC--CCCCCCCCceEE
Q 035615 134 LVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNV--PKEPLRLDNIVL 211 (223)
Q Consensus 134 v~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~--~~~l~~~~nv~~ 211 (223)
|++++|.. .+..++ ++....++++++++++++......+.+.+.+ ... +....|.. ..+++.-..+++
T Consensus 69 Vilavp~~-~~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~~~-----~v~~hP~~g~~~~~~~g~~~~l 138 (298)
T 2pv7_A 69 VIVSVPIN-LTLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH---TGA-----VLGLHPMFGADIASMAKQVVVR 138 (298)
T ss_dssp EEECSCGG-GHHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---SSE-----EEEEEECSCTTCSCCTTCEEEE
T ss_pred EEEeCCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---CCC-----EEeeCCCCCCCchhhcCCeEEE
Confidence 99999954 466666 3456678999999999887654444454442 122 22223321 124666668999
Q ss_pred ccCC
Q 035615 212 LPCQ 215 (223)
Q Consensus 212 TPH~ 215 (223)
|||-
T Consensus 139 ~~~~ 142 (298)
T 2pv7_A 139 CDGR 142 (298)
T ss_dssp EEEE
T ss_pred ecCC
Confidence 9974
No 67
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.33 E-value=8.6e-13 Score=120.16 Aligned_cols=115 Identities=15% Similarity=0.220 Sum_probs=94.9
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------C--cccccChhhhhc---CCcEEEEeccCChhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV--------L--FPYCANVYDLAV---NSDVLVVCCALTEQTH 145 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------~--~~~~~~l~el~~---~aDiv~~~~p~t~~t~ 145 (223)
.++|||||+|.||+.+|+.|...|++|.+|||+++..+ + .....+++|+++ .+|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 46899999999999999999999999999999875422 1 112468888876 5999999999887888
Q ss_pred hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCC
Q 035615 146 HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFE 194 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~ 194 (223)
.++ ++....|++|.++||++++...+...+.+.+.+..+.....-|+.
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 877 577888999999999999999999999999998888744333443
No 68
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.30 E-value=6.1e-12 Score=106.85 Aligned_cols=126 Identities=9% Similarity=0.104 Sum_probs=95.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCC------------------------------cccccChhhhhc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVL------------------------------FPYCANVYDLAV 129 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~------------------------------~~~~~~l~el~~ 129 (223)
++|+|||.|.||+.+|+.+...|++|++||++++..+. .....++++.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 68999999999999999999999999999998653210 122467788899
Q ss_pred CCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCCCCCCCCce
Q 035615 130 NSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPKEPLRLDNI 209 (223)
Q Consensus 130 ~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nv 209 (223)
+||+|+.++|.+.+....+-++..+.+++++++++.+.+ +....+.+++... ....++..|. |.+..+.+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~-------p~~~~~lv 154 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN-------HVWVNNTA 154 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS-------STTTSCEE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC-------CcccCceE
Confidence 999999999988766666656777889999999965444 3566777777543 2345666553 34566778
Q ss_pred EEccCC
Q 035615 210 VLLPCQ 215 (223)
Q Consensus 210 ~~TPH~ 215 (223)
.++||-
T Consensus 155 evv~~~ 160 (283)
T 4e12_A 155 EVMGTT 160 (283)
T ss_dssp EEEECT
T ss_pred EEEeCC
Confidence 888873
No 69
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.29 E-value=3.3e-12 Score=108.38 Aligned_cols=136 Identities=15% Similarity=0.120 Sum_probs=96.5
Q ss_pred CCEEEEEecChHHHHHHHHHHhC--CCEEEEEcCCCCCCC-----Cc--ccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF--GFIISYNSRRKRPSV-----LF--PYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~~-----~~--~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
-++|||||+|.||+.+++.|... |++|+++|+++.... +. ....+++++++++|+|++++|.. ....++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK-KTIDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH-HHHHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH-HHHHHH-
Confidence 46899999999999999999876 689999998764321 22 13457788889999999999944 335555
Q ss_pred HHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEee---CCCC---CCCCC-CCCCCCCceEEccCCCCC
Q 035615 150 KDVMAE-LGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLD---VFEN---DPNVP-KEPLRLDNIVLLPCQNAL 218 (223)
Q Consensus 150 ~~~l~~-mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lD---V~~~---EP~~~-~~l~~~~nv~~TPH~a~~ 218 (223)
++.... ++++.+++++++......+.+.+.+.+..+. .++ ++.. .|... .+++.-.+++++||.++.
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCC
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCC
Confidence 345566 8999999999988876667888877753333 333 2322 22222 267777789999997643
No 70
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.28 E-value=4.8e-12 Score=115.26 Aligned_cols=109 Identities=17% Similarity=0.253 Sum_probs=90.9
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC---------CcccccChhhhhcC---CcEEEEeccCChhh
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV---------LFPYCANVYDLAVN---SDVLVVCCALTEQT 144 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~l~el~~~---aDiv~~~~p~t~~t 144 (223)
.+.++|||||+|.||+.+|+.|...|++|.+|+|+++..+ +.....+++++++. +|+|++++|..+.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 5678899999999999999999999999999999865321 23345688888877 99999999987778
Q ss_pred hhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 145 HHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
+.++ ++....++++.++||++.|...+...+.+.+.+..+.
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 8887 4677789999999999999988888899999876655
No 71
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.27 E-value=5.5e-12 Score=107.28 Aligned_cols=107 Identities=16% Similarity=0.272 Sum_probs=87.9
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccC--HHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN--KDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~--~~~ 152 (223)
++|+|||+|.||+.+++.|...|++|.+|+|+++..+ +.....+++++++++|+|++++|....++.++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 5899999999999999999999999999998865322 334456888999999999999997666676662 345
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.+.++++.++|++++|...+.+.|.+.+.+..+.
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGVE 119 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6778999999999999887788899999876554
No 72
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.26 E-value=9.3e-12 Score=105.55 Aligned_cols=106 Identities=15% Similarity=0.169 Sum_probs=85.9
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCH--HH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINK--DV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~--~~ 152 (223)
++|+|||+|.||+.+++.|...|++|.+|+ +++... +.....+++++++++|+|++++|....++.++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999998 665432 3334568889999999999999966656666532 45
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.+.++++.++|+++++...+.+.+.+.+.+..+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 116 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGAD 116 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 5678999999999999888888899998875443
No 73
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.25 E-value=7.5e-12 Score=106.52 Aligned_cols=108 Identities=16% Similarity=0.242 Sum_probs=88.1
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccC--HH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN--KD 151 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~--~~ 151 (223)
.++|+|||+|.||+.+++.|...|++|.+|+|+++... +.....+++++++++|+|++++|....++.++. ++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 83 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGG 83 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcch
Confidence 36899999999999999999999999999998764321 334456888999999999999997766777763 35
Q ss_pred HHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 152 VMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 152 ~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
..+.++++.++|++++|...+.+.+.+.+.+..+.
T Consensus 84 l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~ 118 (301)
T 3cky_A 84 VLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGID 118 (301)
T ss_dssp HHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCE
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 66778999999999999877788898888875444
No 74
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.24 E-value=1.2e-11 Score=109.19 Aligned_cols=96 Identities=9% Similarity=0.144 Sum_probs=78.2
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccc-------------------------cccChh
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFP-------------------------YCANVY 125 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~-------------------------~~~~l~ 125 (223)
.+.+++|+|||+|.||..+++.++++|++|+++|+++...+ +.. ...+++
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 57899999999999999999999999999999999875421 111 023577
Q ss_pred hhhcCCcEEEEec--cCChhhhhccCHHHHhcCCCCcEEEEcC--CCcccC
Q 035615 126 DLAVNSDVLVVCC--ALTEQTHHIINKDVMAELGKGGMIINVG--RGALID 172 (223)
Q Consensus 126 el~~~aDiv~~~~--p~t~~t~~li~~~~l~~mk~ga~lIN~a--rg~~vd 172 (223)
+.++++|+|+.++ |.. .+..+++++.++.||+|++|||++ +|+.+.
T Consensus 261 e~l~~aDIVI~tv~iPg~-~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGR-PAPRLVTAAAATGMQPGSVVVDLAGETGGNCE 310 (381)
T ss_dssp HHHTTCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred HHHhcCCEEEECCCCCCc-ccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence 8999999999875 532 356789999999999999999998 676654
No 75
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.24 E-value=5e-12 Score=105.24 Aligned_cols=92 Identities=14% Similarity=0.300 Sum_probs=67.0
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCC--------------C------CCcccccChhhhhcCCc
Q 035615 73 LGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRP--------------S------VLFPYCANVYDLAVNSD 132 (223)
Q Consensus 73 ~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~--------------~------~~~~~~~~l~el~~~aD 132 (223)
...++.+++|||||+|.||+.+|+.|...|++|++|+|+++. . .+.....++.+++++||
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD 92 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAE 92 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCS
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCC
Confidence 356799999999999999999999999999999999998764 1 02233567889999999
Q ss_pred EEEEeccCChhhhhccCHHH-HhcCCCCcEEEEcCC
Q 035615 133 VLVVCCALTEQTHHIINKDV-MAELGKGGMIINVGR 167 (223)
Q Consensus 133 iv~~~~p~t~~t~~li~~~~-l~~mk~ga~lIN~ar 167 (223)
+|++++|...... .+. +. ...+ ++.++|+++-
T Consensus 93 vVilavp~~~~~~-~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 93 LVVNATEGASSIA-ALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp EEEECSCGGGHHH-HHH-HHCHHHH-TTSEEEECCC
T ss_pred EEEEccCcHHHHH-HHH-Hhhhhhc-CCCEEEECCC
Confidence 9999999654333 332 22 2334 7899999993
No 76
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.23 E-value=1.8e-11 Score=108.81 Aligned_cols=97 Identities=12% Similarity=0.300 Sum_probs=79.0
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc-----------------------------c
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY-----------------------------C 121 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~-----------------------------~ 121 (223)
.+.+.+|+|+|+|.||..+++.++++|++|+++|+++...+ +... .
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 47899999999999999999999999999999999875421 1110 1
Q ss_pred cChhhhhcCCcEEEEec--cCChhhhhccCHHHHhcCCCCcEEEEcC--CCcccCH
Q 035615 122 ANVYDLAVNSDVLVVCC--ALTEQTHHIINKDVMAELGKGGMIINVG--RGALIDE 173 (223)
Q Consensus 122 ~~l~el~~~aDiv~~~~--p~t~~t~~li~~~~l~~mk~ga~lIN~a--rg~~vd~ 173 (223)
.++++.++++|+|+.++ |.. ....+++++.++.||+|+++||++ +|+.++.
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred hHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 25788899999999875 532 356789999999999999999999 7777644
No 77
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.8e-11 Score=110.63 Aligned_cols=107 Identities=16% Similarity=0.263 Sum_probs=90.2
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------CcccccChhhhhcC---CcEEEEeccCChhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------LFPYCANVYDLAVN---SDVLVVCCALTEQTH 145 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------~~~~~~~l~el~~~---aDiv~~~~p~t~~t~ 145 (223)
..+|||||+|.||+.+|+.|...|++|.+|||+++..+ +.....+++++++. +|+|++++|..+.++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 46799999999999999999999999999999875421 23345688888876 999999999877888
Q ss_pred hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 146 HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.++ ++....+++|.++|+++.+...+...+.+.+.+..+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 877 5677889999999999999988888899989876555
No 78
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.21 E-value=1.2e-11 Score=104.91 Aligned_cols=104 Identities=16% Similarity=0.217 Sum_probs=83.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCH--HH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINK--DV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~--~~ 152 (223)
++|+|||+|.||+.+++.|...|++|.+|+|+++... +.....+++++++++|+|++++|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 4799999999999999999999999999999875422 3334568889999999999999977677766532 24
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
++.++++.++|+++.....+...+.+.+.+.
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~ 111 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKM 111 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999998888777777777777654
No 79
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.21 E-value=1.5e-11 Score=103.79 Aligned_cols=108 Identities=15% Similarity=0.226 Sum_probs=85.7
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
++|+|||+|.||+.+++.|.. |++|.+|+|+++... +..... ++++++++|+|++++|....++.++ ++..+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 479999999999999999999 999999999875432 122233 7788889999999999665566665 45667
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDV 192 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV 192 (223)
.++++.++|+++.+...+.+.+.+.+.+..+. .+|.
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~--~~~~ 114 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGVT--YLDA 114 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE--EEEC
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEEe
Confidence 78999999999999888888999999875443 4453
No 80
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.20 E-value=2.2e-11 Score=104.53 Aligned_cols=107 Identities=14% Similarity=0.232 Sum_probs=86.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCH--HH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINK--DV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~--~~ 152 (223)
++|+|||+|.||+.+|+.|...|++|.+++|+++... +.....+++++++++|+|++++|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999876532 2333467888899999999999966666665532 24
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
++.++++.++|+++++.....+.+.+.+......
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~ 144 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGR 144 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 5678999999999998877788888888765554
No 81
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.17 E-value=1e-11 Score=104.34 Aligned_cols=103 Identities=13% Similarity=0.114 Sum_probs=78.8
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCCh--hhhhc
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTE--QTHHI 147 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~--~t~~l 147 (223)
+++| +++|||.|.||+.+++.|...|++|.+++|+.++.. +.. ..+++++ +++|+|++++|... .+...
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~ 190 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSASP 190 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCC
Confidence 5789 999999999999999999999999999999864322 111 4567888 99999999999662 23244
Q ss_pred cCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 148 INKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 148 i~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
+. .+.++++.++++++.+.. +. .|.+++++..+.
T Consensus 191 l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~~g~~ 224 (263)
T 2d5c_A 191 LP---AELFPEEGAAVDLVYRPL-WT-RFLREAKAKGLK 224 (263)
T ss_dssp SC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHHTTCE
T ss_pred CC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHHCcCE
Confidence 43 456899999999998744 33 477777776554
No 82
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=1.6e-11 Score=107.33 Aligned_cols=130 Identities=12% Similarity=0.058 Sum_probs=89.4
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhc----CCcEEEEeccCChhhhhccC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAV----NSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~----~aDiv~~~~p~t~~t~~li~ 149 (223)
-++|||||+|.||+++|+.|+..|++|++||+++.... +.....+++++++ .+|+|++++|. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 35799999999999999999999999999999875432 3333567777765 47999999994 4566666
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEee---CCCCCCC-C---CCCCCCCCceEEccCC
Q 035615 150 KDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLD---VFENDPN-V---PKEPLRLDNIVLLPCQ 215 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lD---V~~~EP~-~---~~~l~~~~nv~~TPH~ 215 (223)
++ +..++++++++|++..+..-.+++.+.+. ... +++ ++..|-. + ...|+.-.++++||+-
T Consensus 86 ~~-l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~--~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~ 153 (341)
T 3ktd_A 86 DA-VHTHAPNNGFTDVVSVKTAVYDAVKARNM--QHR--YVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQ 153 (341)
T ss_dssp HH-HHHHCTTCCEEECCSCSHHHHHHHHHTTC--GGG--EECEEECCSCC-CCGGGCCSSTTTTCEEEECCGG
T ss_pred HH-HHccCCCCEEEEcCCCChHHHHHHHHhCC--CCc--EecCCccccccccchhhhhhHHhcCCeEEEEeCC
Confidence 33 34458999999998766533334444332 122 333 3444311 1 1257877789999974
No 83
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.16 E-value=3.1e-11 Score=109.78 Aligned_cols=107 Identities=15% Similarity=0.250 Sum_probs=88.5
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC---------CcccccChhhhhcC---CcEEEEeccCChhhhhc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV---------LFPYCANVYDLAVN---SDVLVVCCALTEQTHHI 147 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~l~el~~~---aDiv~~~~p~t~~t~~l 147 (223)
++|||||+|.||+.+|+.|...|++|.+|+|+++..+ +.....+++++++. +|+|++++|....++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5799999999999999999999999999999864321 23345688888876 99999999987777777
Q ss_pred cCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE
Q 035615 148 INKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDING 187 (223)
Q Consensus 148 i~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~ 187 (223)
+ ++....+++|.++|+++.+...+...+.+.+.+..+..
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~ 124 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINF 124 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeE
Confidence 7 45667889999999999998888888888887765553
No 84
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.16 E-value=5.8e-11 Score=108.14 Aligned_cols=108 Identities=14% Similarity=0.229 Sum_probs=88.3
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC----------CCcccccChhhhhc---CCcEEEEeccCChhhhh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS----------VLFPYCANVYDLAV---NSDVLVVCCALTEQTHH 146 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~l~el~~---~aDiv~~~~p~t~~t~~ 146 (223)
++|||||+|.||+.+|+.|...|++|.+|+|+++.. .+.....+++++++ .+|+|++++|....++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 579999999999999999999999999999986532 12334567888874 89999999997777787
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 035615 147 IINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGV 188 (223)
Q Consensus 147 li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a 188 (223)
++ ++....++++.+||+++.+...+...+.+.+.+..+...
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v 123 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV 123 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEe
Confidence 77 456778999999999999988888888888887655533
No 85
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.14 E-value=6.3e-11 Score=107.43 Aligned_cols=91 Identities=15% Similarity=0.203 Sum_probs=76.7
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----CcccccChhhhhcCCcEEEEeccCChhhhhccCH
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINK 150 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~ 150 (223)
.++.||+++|+|+|.||+.+|++|+++|++|+++++++.... ......+++++++.+|+++.+. .+.++++.
T Consensus 261 ~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~at----G~~~vl~~ 336 (488)
T 3ond_A 261 VMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTT----GNKDIIML 336 (488)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECS----SCSCSBCH
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCC----CChhhhhH
Confidence 458999999999999999999999999999999998764321 1123567889999999998754 35778999
Q ss_pred HHHhcCCCCcEEEEcCCCc
Q 035615 151 DVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~ 169 (223)
+.++.||++++++|++++.
T Consensus 337 e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 337 DHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp HHHTTSCTTEEEEESSSTT
T ss_pred HHHHhcCCCeEEEEcCCCC
Confidence 9999999999999999983
No 86
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.14 E-value=4.1e-11 Score=109.04 Aligned_cols=107 Identities=19% Similarity=0.279 Sum_probs=87.6
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------C-------cccccChhhhhc---CCcEEEEeccCChh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------L-------FPYCANVYDLAV---NSDVLVVCCALTEQ 143 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~-------~~~~~~l~el~~---~aDiv~~~~p~t~~ 143 (223)
++|||||+|.||+.+|+.|...|++|.+|+|+++..+ + .....+++++++ .+|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 4799999999999999999999999999999764321 2 233567888876 49999999998777
Q ss_pred hhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceE
Q 035615 144 THHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDING 187 (223)
Q Consensus 144 t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~ 187 (223)
++.++ ++....++++.++|+++.|...+...+.+.+.+..+..
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~ 124 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRF 124 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeE
Confidence 77777 46677889999999999998888888889898766653
No 87
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.11 E-value=7.8e-11 Score=102.64 Aligned_cols=131 Identities=18% Similarity=0.200 Sum_probs=90.7
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC------CCcccccChhhhhcCCcEEEEeccCChhhhhcc
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS------VLFPYCANVYDLAVNSDVLVVCCALTEQTHHII 148 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li 148 (223)
..+.+++|+|||+|.||+++|+.|+..|++|+++++++... .+... .++++++++||+|++++|.. ....++
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~-~~~~e~~~~aDvVilavp~~-~~~~v~ 89 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKV-ADVKTAVAAADVVMILTPDE-FQGRLY 89 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEE-ECHHHHHHTCSEEEECSCHH-HHHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEE-ccHHHHHhcCCEEEEeCCcH-HHHHHH
Confidence 45889999999999999999999999999999999886541 13322 37889999999999999954 335555
Q ss_pred CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCCCCCC----CCCC---CCceEEccCCC
Q 035615 149 NKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFENDPNVPK----EPLR---LDNIVLLPCQN 216 (223)
Q Consensus 149 ~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP~~~~----~l~~---~~nv~~TPH~a 216 (223)
.++....+++++++++++ | +.. ..+.+. ....+||+...|..+. .++. -.++++|||..
T Consensus 90 ~~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 90 KEEIEPNLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp HHHTGGGCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred HHHHHhhCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 435667799999999874 2 222 222111 1223455555564332 2333 45788899954
No 88
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.10 E-value=3.4e-10 Score=95.29 Aligned_cols=131 Identities=16% Similarity=0.243 Sum_probs=90.3
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cc--ccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LF--PYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~--~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
++|+|||+|.||+.+++.|...|++|.+++|+++... +. ....+++++ +++|+|++++|. ..+..++ ++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH-HHH
Confidence 4799999999999999999999999999998764321 22 124577888 999999999993 3455555 355
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCCC---CCCCC-CCCCCCceEEccCCC
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFEND---PNVPK-EPLRLDNIVLLPCQN 216 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~E---P~~~~-~l~~~~nv~~TPH~a 216 (223)
...+++++++|+++.......+.+.+.+. ++.+ ..-++..+ |.... .++.-..++++|+-+
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~-~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~ 142 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIG-GHPMAGTAAQGIDGAEENLFVNAPYVLTPTEY 142 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEE-EEECCCCSCSSGGGCCTTTTTTCEEEEEECTT
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEee-cCcccCCccCCHHHHhHHHhCCCcEEEecCCC
Confidence 66789999999998876665566555443 3321 22333222 21111 456666788888754
No 89
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.09 E-value=2.9e-10 Score=92.38 Aligned_cols=80 Identities=13% Similarity=0.339 Sum_probs=63.7
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
.++..++|+|||+|.||+.+|+.|...|++|.+++|+++ .++++|+|++++| .+.++.++. +..+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-------------~~~~aD~vi~av~-~~~~~~v~~-~l~~ 79 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------ATTLGEIVIMAVP-YPALAALAK-QYAT 79 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-------------CSSCCSEEEECSC-HHHHHHHHH-HTHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-------------HhccCCEEEEcCC-cHHHHHHHH-HHHH
Confidence 458899999999999999999999999999999998754 5678999999999 666666653 3445
Q ss_pred cCCCCcEEEEcCCCcc
Q 035615 155 ELGKGGMIINVGRGAL 170 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~ 170 (223)
.++ ++++|++++|--
T Consensus 80 ~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 80 QLK-GKIVVDITNPLN 94 (209)
T ss_dssp HHT-TSEEEECCCCBC
T ss_pred hcC-CCEEEEECCCCC
Confidence 677 999999999765
No 90
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.09 E-value=6.1e-11 Score=107.18 Aligned_cols=93 Identities=14% Similarity=0.303 Sum_probs=71.9
Q ss_pred ccccCC-CEEEEEecChHHHHHHHHHHhC------CCEEEEEcCCCCCC------CCccc----ccChhhhhcCCcEEEE
Q 035615 74 GFKLGG-MQVGIVRLGNIGSEVLNRLQAF------GFIISYNSRRKRPS------VLFPY----CANVYDLAVNSDVLVV 136 (223)
Q Consensus 74 ~~~l~g-~~vgIiG~G~iG~~~a~~l~~~------G~~V~~~~~~~~~~------~~~~~----~~~l~el~~~aDiv~~ 136 (223)
...|+| +||||||+|+||+++|+.|+.. |++|++..+..... .++.. ..++.|++++||+|++
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVIL 127 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLL 127 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEE
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEE
Confidence 456899 9999999999999999999988 99987555443221 23332 2578999999999999
Q ss_pred eccCChhhhhccCHHHHhcCCCCcEEEEcCCCc
Q 035615 137 CCALTEQTHHIINKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 137 ~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~ 169 (223)
++|..... .++. +.+..||+|++ |-++-|-
T Consensus 128 aVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaGf 157 (525)
T 3fr7_A 128 LISDAAQA-DNYE-KIFSHMKPNSI-LGLSHGF 157 (525)
T ss_dssp CSCHHHHH-HHHH-HHHHHSCTTCE-EEESSSH
T ss_pred CCChHHHH-HHHH-HHHHhcCCCCe-EEEeCCC
Confidence 99976553 4564 68899999998 5666663
No 91
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.68 E-value=9.5e-12 Score=100.87 Aligned_cols=90 Identities=20% Similarity=0.253 Sum_probs=71.9
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
+.+++|+|||+|+||+.+++.|...|++|.+++|++.... +.. ..+++++++++|+|++++|.. .++.++ +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~-~~~~~~~~~~aDvVilav~~~-~~~~v~--~- 91 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAE-VLCYSEAASRSDVIVLAVHRE-HYDFLA--E- 91 (201)
Confidence 6788999999999999999999999999999998865211 122 236778899999999999964 566665 2
Q ss_pred HhcCCCCcEEEEcCCCccc
Q 035615 153 MAELGKGGMIINVGRGALI 171 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~v 171 (223)
+..+++++++||+++|-..
T Consensus 92 l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 4456789999999999853
No 92
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.09 E-value=9.4e-11 Score=97.96 Aligned_cols=98 Identities=8% Similarity=0.123 Sum_probs=76.8
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCC--CCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRR--KRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~--~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
++|||||+|.||+.+|+.|...|++|+++++. ++..+ +.. .+++++++++|+|++++|.....+.+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 47999999999999999999999999998873 21111 222 57788899999999999966555554 456
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
.+.+++ ++|+++.+...+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 667776 99999988877778888888664
No 93
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.06 E-value=8e-11 Score=106.79 Aligned_cols=130 Identities=6% Similarity=0.101 Sum_probs=92.9
Q ss_pred CEEEEEecChHHHHHHHHHHhC--CCEEEEEcCCCCCCC------------------------CcccccChhhhhcCCcE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF--GFIISYNSRRKRPSV------------------------LFPYCANVYDLAVNSDV 133 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~~------------------------~~~~~~~l~el~~~aDi 133 (223)
++|+|||+|.||..+|..|... |++|++||++++..+ ......++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999887 899999998754211 11223567788899999
Q ss_pred EEEeccCChhhhhc-----------c--CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEee---CCCCCC
Q 035615 134 LVVCCALTEQTHHI-----------I--NKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLD---VFENDP 197 (223)
Q Consensus 134 v~~~~p~t~~t~~l-----------i--~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lD---V~~~EP 197 (223)
|++|+|.....++. . .++..+.+++++++|+.|+..+-..+.+.+.+++.... .+| ++.+|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeCHHH
Confidence 99999854332221 1 13455678999999999998888888888888876422 233 356666
Q ss_pred CCCC----CCCCCCceEE
Q 035615 198 NVPK----EPLRLDNIVL 211 (223)
Q Consensus 198 ~~~~----~l~~~~nv~~ 211 (223)
..+. .+...+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 5443 2456667764
No 94
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.06 E-value=1.2e-10 Score=97.54 Aligned_cols=97 Identities=9% Similarity=0.218 Sum_probs=75.9
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCE-EEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhc
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFI-ISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHI 147 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~-V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~l 147 (223)
.++.+++|||||+|.||+.+++.+...|++ |.+++|+++... +.....+++++++++|+|++++|.. ....+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v 84 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAEL 84 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHH
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHH
Confidence 346678999999999999999999988998 889998765422 3334567888899999999999954 34555
Q ss_pred cCHHHHhcCCCCcEEEEcCCCcccCH
Q 035615 148 INKDVMAELGKGGMIINVGRGALIDE 173 (223)
Q Consensus 148 i~~~~l~~mk~ga~lIN~arg~~vd~ 173 (223)
+ ++..+.+++++++|+++.|...+.
T Consensus 85 ~-~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 85 L-QGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp H-HHHHTTCCTTCEEEECCTTSCGGG
T ss_pred H-HHHHhhcCCCcEEEECCCCCchHH
Confidence 4 345567889999999999877543
No 95
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=99.04 E-value=2.4e-10 Score=100.55 Aligned_cols=103 Identities=17% Similarity=0.238 Sum_probs=81.6
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------CcccccChhhhhc-CCcEEEEeccCChhhhhcc
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFPYCANVYDLAV-NSDVLVVCCALTEQTHHII 148 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~el~~-~aDiv~~~~p~t~~t~~li 148 (223)
+|.|++|+|+|+|+||+.+|++|..+|++|+++|+++.... +. ...+.++++. +||+++.|. +.++|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga-~~v~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGA-DAVAPNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCC-EECCGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCC-EEEChHHHhccCCcEeeccc-----hHHHh
Confidence 58999999999999999999999999999999998764322 22 2345667666 899998774 56788
Q ss_pred CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 149 NKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 149 ~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
+.+.++.|+ ..++++.+++++.+++ ..+.|+++.+.
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~ 279 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIV 279 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCE
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCE
Confidence 888888885 5789999999998866 55667776663
No 96
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.03 E-value=3.6e-10 Score=95.60 Aligned_cols=105 Identities=12% Similarity=0.133 Sum_probs=77.2
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChh--hhh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQ--THH 146 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~--t~~ 146 (223)
.++.+++++|||.|.||+++++.|...|++|.+++|++++.. +.....+++++++++|+|++++|.... +..
T Consensus 125 ~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~ 204 (275)
T 2hk9_A 125 PEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPE 204 (275)
T ss_dssp TTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCC
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCC
Confidence 357899999999999999999999999999999999864321 222233788889999999999996532 223
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 147 IINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 147 li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.++ ++.++++.++++++. . ...+.+..++..+.
T Consensus 205 ~i~---~~~l~~g~~viDv~~---~-~t~ll~~a~~~g~~ 237 (275)
T 2hk9_A 205 IFN---YDLIKKDHVVVDIIY---K-ETKLLKKAKEKGAK 237 (275)
T ss_dssp SSC---GGGCCTTSEEEESSS---S-CCHHHHHHHHTTCE
T ss_pred CCC---HHHcCCCCEEEEcCC---C-hHHHHHHHHHCcCE
Confidence 443 356899999999998 2 33355555544443
No 97
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.98 E-value=3.5e-10 Score=97.90 Aligned_cols=113 Identities=12% Similarity=0.064 Sum_probs=82.1
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------------C--------------cccccChhhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------------L--------------FPYCANVYDLA 128 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~--------------~~~~~~l~el~ 128 (223)
-++|+|||.|.||..+|..+...|++|.+||++++... + .....++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 47899999999999999999999999999999864321 1 12346788999
Q ss_pred cCCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCC
Q 035615 129 VNSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFE 194 (223)
Q Consensus 129 ~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~ 194 (223)
++||+|+.++|...+.+..+-++..+.++++++|++.+.+ +....+.+.+.. .....+..-|.
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~ 148 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN 148 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC
Confidence 9999999999977665544436677788999999866555 444566666643 22334454443
No 98
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.97 E-value=6.5e-10 Score=95.10 Aligned_cols=110 Identities=9% Similarity=0.112 Sum_probs=78.2
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------------CcccccChhhhhcCCcEEEEeccCChhh
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------------LFPYCANVYDLAVNSDVLVVCCALTEQT 144 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------------~~~~~~~l~el~~~aDiv~~~~p~t~~t 144 (223)
-.-|+|||||+|.||..+|+.+. .|++|++||++++..+ ......++++ +++||+|+.++|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 34789999999999999999999 9999999999875432 1222456766 88999999999988876
Q ss_pred hhccCHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHcCCceEEEeeCCC
Q 035615 145 HHIINKDVMAELGKGGMII-NVGRGALIDEKEMLQFLVQGDINGVGLDVFE 194 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lI-N~arg~~vd~~al~~aL~~~~i~~a~lDV~~ 194 (223)
+..+-.+ +..+ ++++++ |+|.-++ ..+.+.++ ...+..++.-|.
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~ 132 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN 132 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC
Confidence 6655343 5666 899885 7877443 44544443 222345566555
No 99
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.97 E-value=1.3e-09 Score=98.49 Aligned_cols=152 Identities=14% Similarity=0.114 Sum_probs=99.8
Q ss_pred CCCCCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCC---CCCccccCCCEEEEEecChHHHHHHHHHHhCCCEEE
Q 035615 30 AKQADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGD---YPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIIS 106 (223)
Q Consensus 30 ~~~~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~---~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~ 106 (223)
..|.|-..|.|-+..++|...|. .++|..... +.....-.=++|+|||.|.||..+|..+...|++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~---------~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~ 81 (460)
T 3k6j_A 11 STGENLYFQGSEVRSYLMEAHSL---------AGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETF 81 (460)
T ss_dssp TTSGGGGGCBCHHHHHHHHTTCC---------TTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred ccccchhhhhHHHHHHHHhHHHh---------hccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEE
Confidence 34556666777777777763332 345764321 111111223789999999999999999999999999
Q ss_pred EEcCCCCCC-------------CCc-------------ccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCCCCc
Q 035615 107 YNSRRKRPS-------------VLF-------------PYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELGKGG 160 (223)
Q Consensus 107 ~~~~~~~~~-------------~~~-------------~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga 160 (223)
+||+++++. .+. ....+++ .+++||+|+.++|...+.+..+-++..+.+++++
T Consensus 82 l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~a 160 (460)
T 3k6j_A 82 LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTC 160 (460)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTC
T ss_pred EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCC
Confidence 999987521 011 1234564 6889999999999877665544466777899999
Q ss_pred EEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCC
Q 035615 161 MIINVGRGALIDEKEMLQFLVQGDINGVGLDVFE 194 (223)
Q Consensus 161 ~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~ 194 (223)
+|+..+.+ +....+.+.+.. .-...++.-|.
T Consensus 161 IlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn 191 (460)
T 3k6j_A 161 IFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN 191 (460)
T ss_dssp EEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS
T ss_pred EEEecCCC--hhHHHHHHhccC-CcceEEEEecc
Confidence 99643333 344566665543 23446777666
No 100
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.96 E-value=9e-10 Score=98.88 Aligned_cols=110 Identities=13% Similarity=0.094 Sum_probs=82.4
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----------------------CcccccChhhhhc
Q 035615 73 LGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----------------------LFPYCANVYDLAV 129 (223)
Q Consensus 73 ~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----------------------~~~~~~~l~el~~ 129 (223)
.+++..-++|+|||+|.||..+|..|.. |++|++||++++..+ ......++++.++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 4566777899999999999999999988 999999998865321 1223467788999
Q ss_pred CCcEEEEeccCChh----------hhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 035615 130 NSDVLVVCCALTEQ----------THHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDI 185 (223)
Q Consensus 130 ~aDiv~~~~p~t~~----------t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i 185 (223)
.||+|++++|.... .+..+ +...+ +++++++|+.|+-.+-..+.+.+.+.+..+
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~-~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVI-RDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHH-HHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHH-HHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 99999999995421 12222 44566 899999999999888888899988877644
No 101
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.94 E-value=5.8e-10 Score=85.03 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=74.3
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------Cc--ccccChhhhhcCCcEEEEeccCChhhhhccCH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LF--PYCANVYDLAVNSDVLVVCCALTEQTHHIINK 150 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~--~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~ 150 (223)
+++|+|||.|.||+.+++.|+..|++|.+++|++.... +. ....+++++++++|+|+.++|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 89999999999999999999999999999999865432 11 13467889999999999999865 345554
Q ss_pred HHHhcCCCCcEEEEcCCCcc-------cCHHHHHHHHH
Q 035615 151 DVMAELGKGGMIINVGRGAL-------IDEKEMLQFLV 181 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~~-------vd~~al~~aL~ 181 (223)
+.++++.+++|++...- ++.+++.+.++
T Consensus 98 ---~~l~~g~~vid~~~p~~~~~~~~~~~~d~l~~~~~ 132 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNPPNIERGNNVITLDEIYEISK 132 (144)
T ss_dssp ---GGCCTTCEEEECCSSCSBCCSTTSEEHHHHHHHHH
T ss_pred ---HHcCCCCEEEEccCCccCCCCCEEEeHHHHHHHHH
Confidence 45688999999997543 34455555443
No 102
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.92 E-value=3.4e-09 Score=80.86 Aligned_cols=103 Identities=16% Similarity=0.225 Sum_probs=80.6
Q ss_pred cCCCEEEEEec----ChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 77 LGGMQVGIVRL----GNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 77 l~g~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
++-++|+|||. |++|+.+++.|+..|++|+.+++..+...+...+.+++|+....|++++++| .+....++. +.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~~-~~ 89 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVAK-EA 89 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHHH-HH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHHH-HH
Confidence 56789999999 9999999999999999988888876555566667899999999999999999 566666663 34
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.+ ...++++++.+. ..+.+.+..++..+.
T Consensus 90 ~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 90 VE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp HH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred HH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 44 566777777643 257788888887776
No 103
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.91 E-value=2.9e-09 Score=91.94 Aligned_cols=102 Identities=16% Similarity=0.215 Sum_probs=77.0
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCC----CEEEEEcCCCC--CCC-----CcccccChhhhhcCCcEEEEeccCChhhh
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFG----FIISYNSRRKR--PSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G----~~V~~~~~~~~--~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~ 145 (223)
...++|+|||+|.||..+|+.|...| .+|.+|+|+++ ..+ +.....+..++++.+|+|++++| .....
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 44578999999999999999999988 78999999875 221 33334578888999999999999 45566
Q ss_pred hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 035615 146 HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQ 182 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~ 182 (223)
.++ .+....++++.++|+++.|-- .+.+.+.+.+
T Consensus 99 ~vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 99 FIL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HHH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HHH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 655 345566888999999987643 4456666664
No 104
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.90 E-value=1.1e-09 Score=92.71 Aligned_cols=87 Identities=13% Similarity=0.212 Sum_probs=69.5
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
++|+|||+ |.||+.+++.|...|++|++|+|+++..+ +.. ..+..++++++|+|++++|.. .+..++ ++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-~~~~~~~~~~aDvVi~av~~~-~~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-LTDGDGWIDEADVVVLALPDN-IIEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-CCCSSGGGGTCSEEEECSCHH-HHHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-cCCHHHHhcCCCEEEEcCCch-HHHHHH-HHHH
Confidence 58999999 99999999999999999999998764321 221 236778889999999999854 355555 4556
Q ss_pred hcCCCCcEEEEcCCCc
Q 035615 154 AELGKGGMIINVGRGA 169 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~ 169 (223)
..+++++++|+++.|.
T Consensus 89 ~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 89 PRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGSCTTCEEEESCSHH
T ss_pred HhCCCCCEEEECCCCc
Confidence 6789999999998886
No 105
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.90 E-value=9.7e-10 Score=91.23 Aligned_cols=99 Identities=14% Similarity=0.234 Sum_probs=74.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCC----EEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGF----IISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~----~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
++|+|||+|+||+.+++.|...|+ +|.+|||+++..+ +.....+..++++++|+|++++|. .....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 689999999999999999999998 8999999875432 334456888999999999999973 3455555
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 035615 150 KDVMAELGKGGMIINVGRGALIDEKEMLQFLVQ 182 (223)
Q Consensus 150 ~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~ 182 (223)
++....++++.++|.+..|-- .+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi~--~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGKS--IESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCSC--HHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCCC--HHHHHHHhCC
Confidence 445566888999997765543 4566666644
No 106
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.89 E-value=1e-09 Score=89.53 Aligned_cols=90 Identities=17% Similarity=0.272 Sum_probs=68.2
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
..++|+|||+|.||+.+++.|...|++|.+++|+++... +.. ..+++++++++|+|++++|. .....++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-~~~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQ-VTFQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSE-EEEHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc-eecHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 457899999999999999999999999999998764321 222 23778889999999999994 34555553
Q ss_pred HhcCCCCcEEEEcCCCcccC
Q 035615 153 MAELGKGGMIINVGRGALID 172 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd 172 (223)
++.+.+++++|++++|...+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 33333799999999997654
No 107
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.89 E-value=3e-09 Score=88.53 Aligned_cols=96 Identities=20% Similarity=0.309 Sum_probs=73.4
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
++|||||+|.||+.+++.|...|.+|.+|+|+++... +...+.+++++++++|+|++++| ..... +.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~-----~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFE-----TVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHH-----HHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHH-----HHH
Confidence 5899999999999999999999999999999865422 33345688899999999999999 43333 344
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 154 AELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
..++++.++|++..|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 45678899999976644 34566666543
No 108
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.88 E-value=5.1e-09 Score=87.17 Aligned_cols=99 Identities=16% Similarity=0.352 Sum_probs=71.3
Q ss_pred CCEEEEEecChHHHHHHHHHHhCC----CEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFG----FIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G----~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
.++|+|||+|.||+.+++.|...| .+|.+|||+++. .+.....+..++++++|+|++++| ....+.++. +...
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~-~l~~ 80 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN-NIKP 80 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-HSGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-HHHH
Confidence 468999999999999999998888 689999998765 444445678888999999999999 445555542 3444
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
.++ +.++|....| ++.+.+.+.+..+
T Consensus 81 ~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 81 YLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp GCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred hcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 564 5555555444 3334666666553
No 109
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.87 E-value=6.9e-09 Score=93.69 Aligned_cols=102 Identities=6% Similarity=0.139 Sum_probs=78.4
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-------------------------CcccccChhhhhcCCcEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-------------------------LFPYCANVYDLAVNSDVL 134 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------------------------~~~~~~~l~el~~~aDiv 134 (223)
++|+|||+|.||..+|..|...|++|++||++++..+ ......+++++++.||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 6899999999999999999999999999998864211 012346788889999999
Q ss_pred EEeccCCh---------hhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 035615 135 VVCCALTE---------QTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQ 182 (223)
Q Consensus 135 ~~~~p~t~---------~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~ 182 (223)
++++|... ..+..+ +...+.++++.++|+.|.-.+-..+.+.+.+++
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99998543 333333 456677899999999997665556667666655
No 110
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.87 E-value=1.4e-09 Score=93.66 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=77.3
Q ss_pred CCCEEEEEecChHHHHHHHHHHh-CCC-EEEEEcCCCCCCC------C--cccccChhhhhcCCcEEEEeccCChhhhhc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQA-FGF-IISYNSRRKRPSV------L--FPYCANVYDLAVNSDVLVVCCALTEQTHHI 147 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~-~G~-~V~~~~~~~~~~~------~--~~~~~~l~el~~~aDiv~~~~p~t~~t~~l 147 (223)
..++|||||+|.||+.+++.+.. +|+ +|.+|||+++..+ + .....+++++++++|+|++++|. .+.+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcc
Confidence 46799999999999999999875 487 8999999865432 2 33457889999999999999984 3556
Q ss_pred cCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeC
Q 035615 148 INKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDV 192 (223)
Q Consensus 148 i~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV 192 (223)
+.. +.+++|.++++++....-. ..+.+.+.+... .++|-
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~--~~vD~ 249 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRPDW-RELDDELMKEAV--LYVDS 249 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSE--EEESC
T ss_pred cCH---HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCE--EEECC
Confidence 654 4689999999998766532 334433333333 36773
No 111
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.84 E-value=2.3e-08 Score=90.17 Aligned_cols=104 Identities=10% Similarity=0.200 Sum_probs=80.8
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----C---------------------cccccChhhhhcCCcE
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----L---------------------FPYCANVYDLAVNSDV 133 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~---------------------~~~~~~l~el~~~aDi 133 (223)
.-+++|||+|.||..+|..|...|++|++||+++++.+ + .....++.+.+++||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 35799999999999999999999999999999876421 1 1234678889999999
Q ss_pred EEEeccCCh----------hhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 134 LVVCCALTE----------QTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 134 v~~~~p~t~----------~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
|++|+|... ..+..+ +...+.++++.++|+.|.-.+-..+.+.+.+.+.
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred EEEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 999988432 133333 4567789999999999977766677777777653
No 112
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.83 E-value=4.7e-09 Score=89.58 Aligned_cols=112 Identities=10% Similarity=0.083 Sum_probs=76.3
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------------C------------------cccccChh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------------L------------------FPYCANVY 125 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~------------------~~~~~~l~ 125 (223)
++|+|||.|.||..+|..+...|++|++||++++..+ + .....+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999999854311 0 11235677
Q ss_pred hhhcCCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCC
Q 035615 126 DLAVNSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFE 194 (223)
Q Consensus 126 el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~ 194 (223)
+.+++||+|++++|...+....+-++..+.++++++++....+- ....+.+.+... -...+...+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~-~~~~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQ-DRFAGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCG-GGEEEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCc-ccEEEEecCC
Confidence 78999999999999765443333344556678899888554443 334555554321 1224555443
No 113
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.82 E-value=7.9e-09 Score=92.80 Aligned_cols=102 Identities=12% Similarity=0.156 Sum_probs=77.5
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------------------------C-cccccChhhhhcCCcEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------------------------L-FPYCANVYDLAVNSDVL 134 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------------------------~-~~~~~~l~el~~~aDiv 134 (223)
++|+|||+|.||..+|..|...|++|+++|++++... + .....++++.++.||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 4799999999999999999999999999998754211 1 22345677888999999
Q ss_pred EEeccCChh---------hhhccCHHHHhcCCC---CcEEEEcCCCcccC-HHHHHHHHHc
Q 035615 135 VVCCALTEQ---------THHIINKDVMAELGK---GGMIINVGRGALID-EKEMLQFLVQ 182 (223)
Q Consensus 135 ~~~~p~t~~---------t~~li~~~~l~~mk~---ga~lIN~arg~~vd-~~al~~aL~~ 182 (223)
++++|.... .+..+ ++..+.+++ +.++|+.|...+-. .+.+.+.+++
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999985443 33333 445556788 99999998777655 6677777766
No 114
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.81 E-value=4.9e-09 Score=88.86 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=76.5
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC---EEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF---IISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~---~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
.++|||||+|+||+.+++.+...|+ +|.+|||+++... +.....+..++++++|+|++++|. .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4789999999999999999999998 8999999875432 334456888999999999999973 3445554
Q ss_pred HHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHc
Q 035615 150 KDVMAE-LGKGGMIINVGRGALIDEKEMLQFLVQ 182 (223)
Q Consensus 150 ~~~l~~-mk~ga~lIN~arg~~vd~~al~~aL~~ 182 (223)
++.... ++++.++|++.-|-- .+.|.+.+..
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi~--~~~l~~~l~~ 112 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGVT--TPLIEKWLGK 112 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTCC--HHHHHHHHTC
T ss_pred HHHHhhccCCCeEEEEecCCCC--HHHHHHHcCC
Confidence 334444 688889998876643 4667777765
No 115
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.80 E-value=4.1e-09 Score=87.78 Aligned_cols=96 Identities=19% Similarity=0.293 Sum_probs=70.4
Q ss_pred CEEEEEecChHHHHHHHHHHhCC-CEEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFG-FIISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
++|+|||+|.||+.+++.|...| .+|.+|+|+++... +.....+.++++ ++|+|++++| ......++.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~-- 76 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKN-- 76 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTT--
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHH--
Confidence 47999999999999999999889 99999999865322 333345677888 9999999999 5555544431
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
+.. + +.++|+++.|--. +.+.+.+..+
T Consensus 77 l~~-~-~~ivv~~~~g~~~--~~l~~~~~~~ 103 (263)
T 1yqg_A 77 IRT-N-GALVLSVAAGLSV--GTLSRYLGGT 103 (263)
T ss_dssp CCC-T-TCEEEECCTTCCH--HHHHHHTTSC
T ss_pred hcc-C-CCEEEEecCCCCH--HHHHHHcCCC
Confidence 122 4 8899998655433 6677777653
No 116
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.78 E-value=3.2e-08 Score=81.53 Aligned_cols=99 Identities=20% Similarity=0.217 Sum_probs=75.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEE-EEEcCCCCCCCCcccccChhhhh-cCCcEEEEeccCChhhhhccCHHHHhcCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFII-SYNSRRKRPSVLFPYCANVYDLA-VNSDVLVVCCALTEQTHHIINKDVMAELG 157 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V-~~~~~~~~~~~~~~~~~~l~el~-~~aDiv~~~~p~t~~t~~li~~~~l~~mk 157 (223)
++|||||+|.||+.+++.+...|+++ .++|++.+. .. .+.++++++ .++|+|++++|.... . +.....++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~-~~--~~~~~~~l~~~~~DvVv~~~~~~~~-~----~~~~~~l~ 72 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEH-EK--MVRGIDEFLQREMDVAVEAASQQAV-K----DYAEKILK 72 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCC-TT--EESSHHHHTTSCCSEEEECSCHHHH-H----HHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcch-hh--hcCCHHHHhcCCCCEEEECCCHHHH-H----HHHHHHHH
Confidence 47999999999999999998889997 688887532 22 467899999 699999999983322 2 22344567
Q ss_pred CCcEEEEcCCCcccCH---HHHHHHHHcCCce
Q 035615 158 KGGMIINVGRGALIDE---KEMLQFLVQGDIN 186 (223)
Q Consensus 158 ~ga~lIN~arg~~vd~---~al~~aL~~~~i~ 186 (223)
.|..+|+.+.+..-++ +.|.++.++.+..
T Consensus 73 ~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 73 AGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp TTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 8999999998887666 5677777765443
No 117
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.77 E-value=8e-09 Score=79.37 Aligned_cols=101 Identities=13% Similarity=0.197 Sum_probs=79.4
Q ss_pred CCEEEEEec----ChHHHHHHHHHHhCCCEEEEEcCCC--CCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 79 GMQVGIVRL----GNIGSEVLNRLQAFGFIISYNSRRK--RPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 79 g~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~~--~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
-++|+|||. |++|..+++.|...|++|+.+++.. +...+...+.+++|+....|++++++| .+....++. +.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~-~~ 90 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ-EA 90 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH-HH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH-HH
Confidence 678999999 8999999999999999988888876 444466667789999889999999999 466666663 34
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 153 MAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.+ ...++++++.+ .. ++.+.+++++..+.
T Consensus 91 ~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi~ 119 (145)
T 2duw_A 91 IA-IGAKTLWLQLG--VI--NEQAAVLAREAGLS 119 (145)
T ss_dssp HH-HTCCEEECCTT--CC--CHHHHHHHHTTTCE
T ss_pred HH-cCCCEEEEcCC--hH--HHHHHHHHHHcCCE
Confidence 44 56667777753 22 67888888888877
No 118
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.76 E-value=1.6e-08 Score=87.69 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=73.9
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------C-----c---------ccccChhhhhcCCcEEEEecc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------L-----F---------PYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~-----~---------~~~~~l~el~~~aDiv~~~~p 139 (223)
++|+|||+|.||..+|..|...|++|.+++|+++... + . ....+++++++.+|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999999999998754211 1 0 124577888899999999999
Q ss_pred CChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 035615 140 LTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQ 182 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~ 182 (223)
... +..++ ++..+.+++++++|+. .|.......+.+.+.+
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 554 44544 4566678999999998 4422344445566655
No 119
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.74 E-value=2e-08 Score=84.27 Aligned_cols=88 Identities=23% Similarity=0.243 Sum_probs=66.4
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc-------c-----cccChhhhhcCCcEEEEeccCChhhhhc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLF-------P-----YCANVYDLAVNSDVLVVCCALTEQTHHI 147 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~-------~-----~~~~l~el~~~aDiv~~~~p~t~~t~~l 147 (223)
++|+|||.|.||..+|..|...|++|.+++|+++..... . ...+..+.++.+|+|++++|.. .+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 479999999999999999999999999999987543210 0 0123346778999999999954 45555
Q ss_pred cCHHHHhcCCCCcEEEEcCCCc
Q 035615 148 INKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 148 i~~~~l~~mk~ga~lIN~arg~ 169 (223)
+ ++....+++++++|++..|-
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSSS
T ss_pred H-HHHHhhCCCCCEEEEecCCC
Confidence 5 45566788899999987653
No 120
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.74 E-value=9.7e-09 Score=82.78 Aligned_cols=112 Identities=19% Similarity=0.173 Sum_probs=80.2
Q ss_pred CEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC------C------cccccChhhhhcCCcEEEEeccCChhhhh
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV------L------FPYCANVYDLAVNSDVLVVCCALTEQTHH 146 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~------~~~~~~l~el~~~aDiv~~~~p~t~~t~~ 146 (223)
++|+|+| .|.||+.+++.|...|++|.+++|+++... + .....+++++++++|+|++++| ...++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~-~~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIP-WEHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSC-HHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCC-hhhHHH
Confidence 4799999 999999999999999999999998754321 1 0113467788899999999998 334444
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccC------------HHHHHHHHHcCCceEEEeeCCCCCCC
Q 035615 147 IINKDVMAELGKGGMIINVGRGALID------------EKEMLQFLVQGDINGVGLDVFENDPN 198 (223)
Q Consensus 147 li~~~~l~~mk~ga~lIN~arg~~vd------------~~al~~aL~~~~i~~a~lDV~~~EP~ 198 (223)
++. +..+.++ +.++|+++.|--.+ .+.+.+.+.. . ..++++.++|.
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~--~--~~v~~~~~~~~ 137 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES--E--KVVSALHTIPA 137 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC--S--CEEECCTTCCH
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC--C--eEEEEccchHH
Confidence 442 3334454 89999999876532 5667776653 2 36688877663
No 121
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.71 E-value=3.1e-08 Score=85.99 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=69.2
Q ss_pred CCEEEEEecChHHHHHHHHHHhCC-------CEEEEEcCCCC-----CCC-------------------CcccccChhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFG-------FIISYNSRRKR-----PSV-------------------LFPYCANVYDL 127 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G-------~~V~~~~~~~~-----~~~-------------------~~~~~~~l~el 127 (223)
.++|+|||.|.||..+|..|...| .+|.+|+|++. ... ......++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 468999999999999999998888 89999998765 110 01123567788
Q ss_pred hcCCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcc
Q 035615 128 AVNSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 128 ~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~ 170 (223)
++.+|+|++++|. ..+..++ ++....+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 8999999999994 4455554 345566788999999988754
No 122
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.70 E-value=9.2e-09 Score=90.20 Aligned_cols=92 Identities=11% Similarity=0.035 Sum_probs=72.3
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-------------C------cccccChhhhhcCCcEEEEecc
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-------------L------FPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------------~------~~~~~~l~el~~~aDiv~~~~p 139 (223)
.++|+|||.|.||..+|..|...|++|.+|+|+++..+ + .....++++.++.+|+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 46899999999999999999999999999999754211 0 1224678889999999999999
Q ss_pred CChhhhhccCHHHHhcCCCCcEEEEcCCCcccC
Q 035615 140 LTEQTHHIINKDVMAELGKGGMIINVGRGALID 172 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd 172 (223)
. ...+.++ ++....+++++++|+++.|-..+
T Consensus 109 ~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 109 S-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTT
T ss_pred H-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcC
Confidence 3 3555555 45666788999999998876654
No 123
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.68 E-value=2.1e-08 Score=86.10 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=72.0
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcC--CCCCCC-----Cc-----------cccc--ChhhhhcCCcEEEEecc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSR--RKRPSV-----LF-----------PYCA--NVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~--~~~~~~-----~~-----------~~~~--~l~el~~~aDiv~~~~p 139 (223)
++|+|||+|.||+.+|..|...|++|.+++| +++..+ +. .... ++.+.++.+|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999988999999998 643211 11 1223 66778899999999999
Q ss_pred CChhhhhccCHHHHhcCCCCcEEEEcCCCc---c-cCHHHHHHHHHc
Q 035615 140 LTEQTHHIINKDVMAELGKGGMIINVGRGA---L-IDEKEMLQFLVQ 182 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~ga~lIN~arg~---~-vd~~al~~aL~~ 182 (223)
.. .+..++ ++... ++++.++|+++.|- - -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 54 455554 34555 88899999998775 1 122345555654
No 124
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.67 E-value=2.4e-08 Score=81.52 Aligned_cols=87 Identities=18% Similarity=0.239 Sum_probs=63.2
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEE-EcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhccCHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISY-NSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~ 151 (223)
-++|+|||+|+||+.+|+.|...|++|.+ ++|+++..+ +.....+..+.++++|+|++++|. .....++.+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~~- 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVTQ- 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHHH-
Confidence 46899999999999999999999999988 999876543 222234555668899999999983 233333321
Q ss_pred HHhcCCCCcEEEEcCCCc
Q 035615 152 VMAELGKGGMIINVGRGA 169 (223)
Q Consensus 152 ~l~~mk~ga~lIN~arg~ 169 (223)
+.. .++.++|+++-|-
T Consensus 101 -l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp -CSC-CTTCEEEECCCCB
T ss_pred -hhc-cCCCEEEEcCCCC
Confidence 122 2578999998664
No 125
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.67 E-value=3.9e-08 Score=89.43 Aligned_cols=103 Identities=9% Similarity=0.087 Sum_probs=75.1
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------------C-------------cccccChhhhhcCCcE
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------------L-------------FPYCANVYDLAVNSDV 133 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------------~-------------~~~~~~l~el~~~aDi 133 (223)
.++|+|||+|.||..+|..|...|++|++||++++..+ + .....++++.++.||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 57999999999999999999999999999998754211 1 1223466678889999
Q ss_pred EEEeccCC---------hhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 035615 134 LVVCCALT---------EQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQ 182 (223)
Q Consensus 134 v~~~~p~t---------~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~ 182 (223)
|++|+|.. ...+..+ +...+.+++++++|+.+.-.+-..+.+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999852 3344443 445667899999999985444444555555543
No 126
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.67 E-value=2.2e-08 Score=88.00 Aligned_cols=88 Identities=10% Similarity=0.151 Sum_probs=67.5
Q ss_pred CEEEEEecChHHHHHHHHHHhCC-------CEEEEEcCCCC-----CCC-------------------CcccccChhhhh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFG-------FIISYNSRRKR-----PSV-------------------LFPYCANVYDLA 128 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G-------~~V~~~~~~~~-----~~~-------------------~~~~~~~l~el~ 128 (223)
++|+|||.|.||..+|..|...| .+|.+|+|+++ ..+ ......++++.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998878 89999998765 211 112235677888
Q ss_pred cCCcEEEEeccCChhhhhccCHHHHh----cCCCCcEEEEcCCCc
Q 035615 129 VNSDVLVVCCALTEQTHHIINKDVMA----ELGKGGMIINVGRGA 169 (223)
Q Consensus 129 ~~aDiv~~~~p~t~~t~~li~~~~l~----~mk~ga~lIN~arg~ 169 (223)
+.+|+|++++| +...+.++ ++... .+++++++|+++.|-
T Consensus 102 ~~aDvVilav~-~~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 102 NDADLLIFIVP-CQYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp TTCSEEEECCC-HHHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred cCCCEEEEcCC-HHHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 99999999999 35555554 23444 678899999998873
No 127
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.66 E-value=1.1e-08 Score=93.27 Aligned_cols=114 Identities=9% Similarity=0.094 Sum_probs=80.4
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------------Cc-------------ccccChhhhhc
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------------LF-------------PYCANVYDLAV 129 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~~-------------~~~~~l~el~~ 129 (223)
-++|||||.|.||..+|+.+...|++|++||++++..+ +. ....+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 45899999999999999999999999999999865321 10 1134554 588
Q ss_pred CCcEEEEeccCChhhhhccCHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHcCCceEEEeeCCCCCC
Q 035615 130 NSDVLVVCCALTEQTHHIINKDVMAELGKGGMII-NVGRGALIDEKEMLQFLVQGDINGVGLDVFENDP 197 (223)
Q Consensus 130 ~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lI-N~arg~~vd~~al~~aL~~~~i~~a~lDV~~~EP 197 (223)
+||+|+.++|...+.+.-+-++..+.++++++|+ |+|.-+ ...+.+.+.. .-...++..|.+-|
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~---i~~ia~~~~~-p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS---ITAIAAEIKN-PERVAGLHFFNPAP 148 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSC---HHHHTTTSSS-GGGEEEEEECSSTT
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCC---HHHHHHHccC-ccceEEeeecChhh
Confidence 9999999999876655444356777789999984 676544 3455555542 23445677665444
No 128
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.65 E-value=9.1e-08 Score=81.08 Aligned_cols=80 Identities=19% Similarity=0.351 Sum_probs=67.9
Q ss_pred cccCCCEEEEEecCh-HHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 75 FKLGGMQVGIVRLGN-IGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
.+++|+++.|||.|. +|+.+|..|...|++|.+.++.. .++++.+++||+|+.+++. .++|..++
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~- 221 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------KDLSLYTRQADLIIVAAGC----VNLLRSDM- 221 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------SCHHHHHTTCSEEEECSSC----TTCBCGGG-
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhhcCCEEEECCCC----CCcCCHHH-
Confidence 468999999999988 69999999999999999987643 4789999999999999972 44577765
Q ss_pred hcCCCCcEEEEcCCCcc
Q 035615 154 AELGKGGMIINVGRGAL 170 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~ 170 (223)
+|+|+++||++.-.+
T Consensus 222 --vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 222 --VKEGVIVVDVGINRL 236 (285)
T ss_dssp --SCTTEEEEECCCEEC
T ss_pred --cCCCeEEEEeccCcc
Confidence 599999999996553
No 129
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.64 E-value=2.4e-08 Score=84.78 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=72.7
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc------------ccChhhhhc---CCcEEEEecc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY------------CANVYDLAV---NSDVLVVCCA 139 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~------------~~~l~el~~---~aDiv~~~~p 139 (223)
++|+|||.|.||+.+|..|...|++|.+++|+++..+ +... ..+.+++.+ .+|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5899999999999999999999999999998764321 1100 113344444 8999999998
Q ss_pred CChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 140 LTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
. ..+..++ ++..+.+++++++|+++.|- -..+.+.+.+.+.++.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 3 4555554 34556788999999998753 2345566666554443
No 130
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.64 E-value=7.8e-08 Score=82.08 Aligned_cols=80 Identities=13% Similarity=0.256 Sum_probs=67.2
Q ss_pred cccCCCEEEEEecCh-HHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChh--hhhcCCcEEEEeccCChhhhhccCHH
Q 035615 75 FKLGGMQVGIVRLGN-IGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVY--DLAVNSDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~--el~~~aDiv~~~~p~t~~t~~li~~~ 151 (223)
.+++|+++.|||.|. +|+.+|+.|...|++|.++++.. .+++ +.+++||+|+.++|. .++|.++
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T---------~~l~l~~~~~~ADIVI~Avg~----p~~I~~~ 227 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT---------STEDMIDYLRTADIVIAAMGQ----PGYVKGE 227 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS---------CHHHHHHHHHTCSEEEECSCC----TTCBCGG
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC---------CCchhhhhhccCCEEEECCCC----CCCCcHH
Confidence 468999999999988 69999999999999999998743 2566 999999999999983 3467776
Q ss_pred HHhcCCCCcEEEEcCCCcc
Q 035615 152 VMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 152 ~l~~mk~ga~lIN~arg~~ 170 (223)
+ +|+|+++||++.-.+
T Consensus 228 ~---vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 228 W---IKEGAAVVDVGTTPV 243 (300)
T ss_dssp G---SCTTCEEEECCCEEE
T ss_pred h---cCCCcEEEEEeccCC
Confidence 5 599999999996543
No 131
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.64 E-value=1.1e-07 Score=80.60 Aligned_cols=79 Identities=22% Similarity=0.331 Sum_probs=67.2
Q ss_pred cccCCCEEEEEecCh-HHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 75 FKLGGMQVGIVRLGN-IGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
.+++|+++.|||.|. +|+.+|+.|...|++|.+.++.. .++++.+++||+|+.+++. .++|..++
T Consensus 157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~- 222 (285)
T 3l07_A 157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT---------TDLKSHTTKADILIVAVGK----PNFITADM- 222 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------SSHHHHHTTCSEEEECCCC----TTCBCGGG-
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------hhHHHhcccCCEEEECCCC----CCCCCHHH-
Confidence 468999999999988 69999999999999999887642 4789999999999999972 34577765
Q ss_pred hcCCCCcEEEEcCCCc
Q 035615 154 AELGKGGMIINVGRGA 169 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~ 169 (223)
+|+|+++||++.-.
T Consensus 223 --vk~GavVIDvgi~~ 236 (285)
T 3l07_A 223 --VKEGAVVIDVGINH 236 (285)
T ss_dssp --SCTTCEEEECCCEE
T ss_pred --cCCCcEEEEecccC
Confidence 59999999999654
No 132
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.64 E-value=5.3e-08 Score=82.57 Aligned_cols=107 Identities=10% Similarity=0.059 Sum_probs=76.2
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCCcc------cccChhhhhcCCcEEEEeccCC--hhhh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVLFP------YCANVYDLAVNSDVLVVCCALT--EQTH 145 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~------~~~~l~el~~~aDiv~~~~p~t--~~t~ 145 (223)
.+++|+++.|+|.|.+|++++..|...|+ +|.+++|+.++..... ...++.++++++|+|+.++|.. +...
T Consensus 113 ~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~ 192 (277)
T 3don_A 113 EGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTD 192 (277)
T ss_dssp TTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------C
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCc
Confidence 35789999999999999999999999999 8999999876543211 2345667788999999999864 2222
Q ss_pred hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 146 HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
..++ .+.++++.+++++...+.. . .|+++.++..+.
T Consensus 193 ~~l~---~~~l~~~~~V~D~vY~P~~-T-~ll~~A~~~G~~ 228 (277)
T 3don_A 193 SVIS---LNRLASHTLVSDIVYNPYK-T-PILIEAEQRGNP 228 (277)
T ss_dssp CSSC---CTTCCSSCEEEESCCSSSS-C-HHHHHHHHTTCC
T ss_pred CCCC---HHHcCCCCEEEEecCCCCC-C-HHHHHHHHCcCE
Confidence 2233 3557899999999877543 3 455555554443
No 133
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.63 E-value=8.9e-08 Score=87.01 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=74.5
Q ss_pred CCEEEEEecChHHHHHHHHHHhC-CC-EEEEEcCCCC----CCC--------------------------CcccccChhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF-GF-IISYNSRRKR----PSV--------------------------LFPYCANVYD 126 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~-G~-~V~~~~~~~~----~~~--------------------------~~~~~~~l~e 126 (223)
-++|+|||+|.||..+|..|... |+ +|++||++++ ..+ +...+.+-.+
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~e 97 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFS 97 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHH
Confidence 36899999999999999999999 99 9999999887 210 0011122267
Q ss_pred hhcCCcEEEEeccCCh--------hhhhcc--CHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 035615 127 LAVNSDVLVVCCALTE--------QTHHII--NKDVMAELGKGGMIINVGRGALIDEKEMLQ 178 (223)
Q Consensus 127 l~~~aDiv~~~~p~t~--------~t~~li--~~~~l~~mk~ga~lIN~arg~~vd~~al~~ 178 (223)
.+++||+|++++|... +...+. .+...+.+++|.++|+.|.-.+-..+.+.+
T Consensus 98 a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 98 RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 7889999999998542 222222 245677899999999999877766666665
No 134
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.63 E-value=4.5e-08 Score=87.09 Aligned_cols=101 Identities=12% Similarity=0.079 Sum_probs=75.9
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cc------------------ccccChhhhhcCCcEEEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LF------------------PYCANVYDLAVNSDVLVV 136 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~------------------~~~~~l~el~~~aDiv~~ 136 (223)
++|+|||+|.||..+|..|.. |++|+++|++++... +. ....+..+.++.+|+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999998 999999998764321 11 123456778889999999
Q ss_pred eccCCh----------hhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 137 CCALTE----------QTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 137 ~~p~t~----------~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
++|... .....+ +...+ ++++.++|+.+.-.+-..+.+.+.+.+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 999653 244443 34555 8999999998877776677787777654
No 135
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.62 E-value=8.6e-08 Score=80.84 Aligned_cols=77 Identities=18% Similarity=0.298 Sum_probs=66.2
Q ss_pred cCCCEEEEEecCh-HHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc
Q 035615 77 LGGMQVGIVRLGN-IGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE 155 (223)
Q Consensus 77 l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~ 155 (223)
++|+++.|||.|. +|+.+|+.|...|++|+++++. ..++++.+++||+|+.+++. .+++.+++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK---------TKDIGSMTRSSKIVVVAVGR----PGFLNREM--- 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSCHHHHHHHSSEEEECSSC----TTCBCGGG---
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC---------cccHHHhhccCCEEEECCCC----CccccHhh---
Confidence 8999999999986 7999999999999999998764 25789999999999999973 33677765
Q ss_pred CCCCcEEEEcCCCc
Q 035615 156 LGKGGMIINVGRGA 169 (223)
Q Consensus 156 mk~ga~lIN~arg~ 169 (223)
+|+|+++||++.-.
T Consensus 212 vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 VTPGSVVIDVGINY 225 (276)
T ss_dssp CCTTCEEEECCCEE
T ss_pred ccCCcEEEEeccCc
Confidence 59999999999644
No 136
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.62 E-value=1.1e-07 Score=80.41 Aligned_cols=81 Identities=17% Similarity=0.297 Sum_probs=68.4
Q ss_pred cccCCCEEEEEecChH-HHHHHHHHHhC--CCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHH
Q 035615 75 FKLGGMQVGIVRLGNI-GSEVLNRLQAF--GFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~i-G~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~ 151 (223)
.+++|+++.|||.|.| |+.+|+.|... |++|+.++++. .++.+.+++||+|+.+++. .++|.++
T Consensus 154 i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------~~L~~~~~~ADIVI~Avg~----p~~I~~~ 220 (281)
T 2c2x_A 154 ISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------RDLPALTRQADIVVAAVGV----AHLLTAD 220 (281)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------SCHHHHHTTCSEEEECSCC----TTCBCGG
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------hHHHHHHhhCCEEEECCCC----CcccCHH
Confidence 4699999999999986 99999999998 89999887554 5789999999999999972 2357776
Q ss_pred HHhcCCCCcEEEEcCCCccc
Q 035615 152 VMAELGKGGMIINVGRGALI 171 (223)
Q Consensus 152 ~l~~mk~ga~lIN~arg~~v 171 (223)
+ +|+|+++||+|.-.+-
T Consensus 221 ~---vk~GavVIDVgi~r~~ 237 (281)
T 2c2x_A 221 M---VRPGAAVIDVGVSRTD 237 (281)
T ss_dssp G---SCTTCEEEECCEEEET
T ss_pred H---cCCCcEEEEccCCCCC
Confidence 6 4899999999976643
No 137
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.62 E-value=7.7e-08 Score=81.61 Aligned_cols=80 Identities=23% Similarity=0.332 Sum_probs=67.7
Q ss_pred cccCCCEEEEEecCh-HHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 75 FKLGGMQVGIVRLGN-IGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
.+++|+++.|||.|. +|+.+|+.|...|++|..+++.. .++.+.+++||+|+.+++. .+++..++
T Consensus 155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------~~L~~~~~~ADIVI~Avg~----p~lI~~~~- 220 (288)
T 1b0a_A 155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---------KNLRHHVENADLLIVAVGK----PGFIPGDW- 220 (288)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---------SCHHHHHHHCSEEEECSCC----TTCBCTTT-
T ss_pred CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhccCCEEEECCCC----cCcCCHHH-
Confidence 468999999999997 59999999999999999887543 4789999999999999972 23677766
Q ss_pred hcCCCCcEEEEcCCCcc
Q 035615 154 AELGKGGMIINVGRGAL 170 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~~ 170 (223)
+|+|+++||+|.-.+
T Consensus 221 --vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 221 --IKEGAIVIDVGINRL 235 (288)
T ss_dssp --SCTTCEEEECCCEEC
T ss_pred --cCCCcEEEEccCCcc
Confidence 499999999996543
No 138
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.62 E-value=1.5e-07 Score=79.75 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=67.0
Q ss_pred cccCCCEEEEEecCh-HHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 75 FKLGGMQVGIVRLGN-IGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
.+++||++.|||.|. +|+.+|..|...|++|.+..+.. .++++.+++||+|+.+++. .+++..++
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~- 222 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT---------RDLADHVSRADLVVVAAGK----PGLVKGEW- 222 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC---------SCHHHHHHTCSEEEECCCC----TTCBCGGG-
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC---------cCHHHHhccCCEEEECCCC----CCCCCHHH-
Confidence 468999999999987 79999999999999999887542 3788999999999999973 44677765
Q ss_pred hcCCCCcEEEEcCCCc
Q 035615 154 AELGKGGMIINVGRGA 169 (223)
Q Consensus 154 ~~mk~ga~lIN~arg~ 169 (223)
+|+|+++||++.-.
T Consensus 223 --vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 223 --IKEGAIVIDVGINR 236 (286)
T ss_dssp --SCTTCEEEECCSCS
T ss_pred --cCCCeEEEEecccc
Confidence 49999999999654
No 139
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.62 E-value=8.1e-09 Score=90.27 Aligned_cols=90 Identities=8% Similarity=0.058 Sum_probs=68.0
Q ss_pred EEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-------------------CcccccChhhhhcCCcEEEEeccCC
Q 035615 81 QVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-------------------LFPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 81 ~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------------------~~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
+|+|||+|.||..+|..|...|++|.+|+|++...+ ......+++++++.+|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999998753211 112235677888999999999994
Q ss_pred hhhhhccCHH---HHhcCCC-CcEEEEcCCCccc
Q 035615 142 EQTHHIINKD---VMAELGK-GGMIINVGRGALI 171 (223)
Q Consensus 142 ~~t~~li~~~---~l~~mk~-ga~lIN~arg~~v 171 (223)
.....++... ....+++ ++++|+++.|-..
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 4555555321 4455677 8999999877443
No 140
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.61 E-value=3.1e-08 Score=86.84 Aligned_cols=92 Identities=13% Similarity=0.176 Sum_probs=71.9
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCC-----ccc-------ccChhhhhcCCcEEEEeccCCh-
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVL-----FPY-------CANVYDLAVNSDVLVVCCALTE- 142 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~-----~~~-------~~~l~el~~~aDiv~~~~p~t~- 142 (223)
.+.+++|.|+|.|.+|+.+++.++.+|++|+++||++.+.+. ... ..++.+.++.+|+|+.+++...
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 477899999999999999999999999999999998654321 111 1245567789999999986432
Q ss_pred hhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 143 QTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 143 ~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
.+..++.++.++.||++.+++|++-
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCeecCHHHHhhCCCCCEEEEEec
Confidence 2345567888999999999999984
No 141
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.60 E-value=4.2e-08 Score=84.83 Aligned_cols=84 Identities=19% Similarity=0.248 Sum_probs=65.0
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----C-----------cccccChhhhhcCCcEEEEeccCCh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----L-----------FPYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~-----------~~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
..+|+|||.|.||..+|..|...|++|.+|+|+++..+ + .....+.++ ++.+|+|++++| +.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-VQ 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-GG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-HH
Confidence 57899999999999999999999999999999754321 1 233456778 889999999999 35
Q ss_pred hhhhccCHHHHhcCC-CCcEEEEcCCCc
Q 035615 143 QTHHIINKDVMAELG-KGGMIINVGRGA 169 (223)
Q Consensus 143 ~t~~li~~~~l~~mk-~ga~lIN~arg~ 169 (223)
.++.++. .++ ++.++|+++.|-
T Consensus 92 ~~~~v~~-----~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 92 YIREHLL-----RLPVKPSMVLNLSKGI 114 (335)
T ss_dssp GHHHHHT-----TCSSCCSEEEECCCCC
T ss_pred HHHHHHH-----HhCcCCCEEEEEeCCC
Confidence 5555442 333 789999999773
No 142
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.60 E-value=2.1e-07 Score=79.38 Aligned_cols=82 Identities=16% Similarity=0.278 Sum_probs=68.4
Q ss_pred ccccCCCEEEEEecCh-HHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 74 GFKLGGMQVGIVRLGN-IGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~-iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
+.+++|+++.|||.|+ +|+.+|+.|...|++|.++++. ..++.+.+++||+|+.+++. .++|..++
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 226 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK---------TAHLDEEVNKGDILVVATGQ----PEMVKGEW 226 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHTTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC---------cccHHHHhccCCEEEECCCC----cccCCHHH
Confidence 3478999999999996 6999999999999999988754 25789999999999999974 33677766
Q ss_pred HhcCCCCcEEEEcCCCccc
Q 035615 153 MAELGKGGMIINVGRGALI 171 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~~v 171 (223)
+|+|+++||+|.-.+-
T Consensus 227 ---vk~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 227 ---IKPGAIVIDCGINYVP 242 (301)
T ss_dssp ---SCTTCEEEECCCBC--
T ss_pred ---cCCCcEEEEccCCCcc
Confidence 5899999999986644
No 143
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.59 E-value=5.2e-08 Score=88.63 Aligned_cols=102 Identities=7% Similarity=0.112 Sum_probs=75.8
Q ss_pred CEEEEEecChHHHHHHHHHHhC--CCEEEEEcCCCCCCC------------C------------cccccChhhhhcCCcE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF--GFIISYNSRRKRPSV------------L------------FPYCANVYDLAVNSDV 133 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~~------------~------------~~~~~~l~el~~~aDi 133 (223)
++|+|||+|.||..+|..|... |++|+++|++++..+ + .....++.+.++.||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999876 799999998754211 0 1123456677889999
Q ss_pred EEEeccCChh--------------hhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 035615 134 LVVCCALTEQ--------------THHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQ 182 (223)
Q Consensus 134 v~~~~p~t~~--------------t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~ 182 (223)
|++|+|.... ....+ +...+.++++.++|+.|.-.+-..+.+.+.+++
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999985321 22222 455677899999999887666666778888876
No 144
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.59 E-value=5.3e-08 Score=80.48 Aligned_cols=70 Identities=16% Similarity=0.253 Sum_probs=57.7
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcCCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAELGK 158 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ 158 (223)
-++|||||+|.||.++|+.|+..|++|.+|++. ++ ++.|| ++++|.. ....++ ++....+++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~-------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~l~~ 67 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP-------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAFARR 67 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG-------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTTCCT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH-------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHhcCC
Confidence 468999999999999999999999999999873 23 57799 7889965 556655 456667899
Q ss_pred CcEEEEcC
Q 035615 159 GGMIINVG 166 (223)
Q Consensus 159 ga~lIN~a 166 (223)
++++++++
T Consensus 68 g~ivvd~s 75 (232)
T 3dfu_A 68 GQMFLHTS 75 (232)
T ss_dssp TCEEEECC
T ss_pred CCEEEEEC
Confidence 99999975
No 145
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.58 E-value=1.2e-07 Score=81.88 Aligned_cols=90 Identities=14% Similarity=0.126 Sum_probs=69.6
Q ss_pred ccccCCCEEEEEecChH-HHHHHHHHHhCCCEEEEEcCCCCC----CC----Ccccc--------cChhhhhcCCcEEEE
Q 035615 74 GFKLGGMQVGIVRLGNI-GSEVLNRLQAFGFIISYNSRRKRP----SV----LFPYC--------ANVYDLAVNSDVLVV 136 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~i-G~~~a~~l~~~G~~V~~~~~~~~~----~~----~~~~~--------~~l~el~~~aDiv~~ 136 (223)
+.++.|+++.|||.|.| |+.+|+.|.+.|++|.+++|+... .. ..... .++++.++++|+|+.
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 45799999999999986 999999999999999999886211 11 11111 568899999999999
Q ss_pred eccCChhhhhccCHHHHhcCCCCcEEEEcCCCc
Q 035615 137 CCALTEQTHHIINKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 137 ~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~ 169 (223)
+++.. ..+|..++ +|+|+++||+|.-.
T Consensus 252 Atg~p---~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 252 GVPSE---NYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp CCCCT---TCCBCTTT---SCTTEEEEECSSSC
T ss_pred CCCCC---cceeCHHH---cCCCeEEEEcCCCc
Confidence 98732 23477765 48999999998764
No 146
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.57 E-value=1.2e-07 Score=81.04 Aligned_cols=106 Identities=11% Similarity=0.103 Sum_probs=75.9
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC------Cc---c--cccChhhhhcCCcEEEEeccCChh
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV------LF---P--YCANVYDLAVNSDVLVVCCALTEQ 143 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~------~~---~--~~~~l~el~~~aDiv~~~~p~t~~ 143 (223)
++.+++++|+|.|.+|+.++..|...|+ +|.+++|+.++.+ +. . ...++.+.+.++|+|+.++|....
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~ 217 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMH 217 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCS
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCC
Confidence 5789999999999999999999999998 8999999864321 11 1 113456778899999999986532
Q ss_pred h--hh-ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 144 T--HH-IINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 144 t--~~-li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
. .. .++ ...++++.+++|++-.+. .. .|.+..++..+.
T Consensus 218 ~~~~~~~i~---~~~l~~~~~v~D~~y~P~-~T-~ll~~A~~~G~~ 258 (297)
T 2egg_A 218 PRVEVQPLS---LERLRPGVIVSDIIYNPL-ET-KWLKEAKARGAR 258 (297)
T ss_dssp SCCSCCSSC---CTTCCTTCEEEECCCSSS-SC-HHHHHHHHTTCE
T ss_pred CCCCCCCCC---HHHcCCCCEEEEcCCCCC-CC-HHHHHHHHCcCE
Confidence 1 11 233 245789999999998543 33 366666665554
No 147
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.56 E-value=5.3e-08 Score=88.19 Aligned_cols=111 Identities=12% Similarity=0.154 Sum_probs=75.7
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCC---------------------------cccccChhhhhcCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVL---------------------------FPYCANVYDLAVNS 131 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~---------------------------~~~~~~l~el~~~a 131 (223)
-++|+|||.|.||..+|..+...|++|+++|++++.... .....++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 468999999999999999999999999999987642110 0112355 567899
Q ss_pred cEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCC
Q 035615 132 DVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVF 193 (223)
Q Consensus 132 Div~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~ 193 (223)
|+|+.++|...+...-+-++..+.++++++|+... .+ +....|.+.+... -...++..|
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snT-s~-~~~~~la~~~~~~-~~~ig~hf~ 174 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNT-SA-LNVDDIASSTDRP-QLVIGTHFF 174 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC-SS-SCHHHHHTTSSCG-GGEEEEEEC
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCC-CC-cCHHHHHHHhcCC-cceEEeecC
Confidence 99999999765443333345666789999998633 33 2334666655432 223466666
No 148
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.55 E-value=1.1e-07 Score=79.67 Aligned_cols=100 Identities=14% Similarity=0.106 Sum_probs=74.9
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCCc------ccccChhhhhcCCcEEEEeccCC--hhhhh
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVLF------PYCANVYDLAVNSDVLVVCCALT--EQTHH 146 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~~------~~~~~l~el~~~aDiv~~~~p~t--~~t~~ 146 (223)
.++| +++|||.|.+|++++..|...|+ +|.+++|+.++.+.. ....++.+.++++|+|++++|.. ++ ..
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~~ 183 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-EL 183 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-CC
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-CC
Confidence 3678 99999999999999999999999 799999987543211 12456778889999999999854 22 22
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 147 IINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 147 li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
.++.+. ++++.+++++.-+ ...-|.++.+.|
T Consensus 184 ~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 184 PVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp SCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 344443 5789999999988 555555666555
No 149
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.55 E-value=1.1e-07 Score=85.25 Aligned_cols=105 Identities=15% Similarity=0.145 Sum_probs=74.3
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----Cc--ccccChhhh---------------hcCCcEEE
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LF--PYCANVYDL---------------AVNSDVLV 135 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~--~~~~~l~el---------------~~~aDiv~ 135 (223)
-.|.++.|||+|.||..+|..|...|++|++||+++++.+ +. .....++|+ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 4689999999999999999999999999999999875422 10 001112222 45799999
Q ss_pred EeccCChhh--------hhcc--CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 035615 136 VCCALTEQT--------HHII--NKDVMAELGKGGMIINVGRGALIDEKEMLQFLV 181 (223)
Q Consensus 136 ~~~p~t~~t--------~~li--~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~ 181 (223)
+|+|..... ..+. .+...+.|++|.++|+.|.-.+-..+.+.+.+.
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHH
Confidence 999954321 1222 245677899999999999888877777777643
No 150
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.49 E-value=1.7e-07 Score=79.05 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=74.5
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc----ccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLF----PYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~----~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
++++.|+|.|.+|++++..|...|.+|.+++|+.++.+.. ....+++++ .++|+|+.++|..-.....++.+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPK-SAFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCS-SCCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHh-ccCCEEEEcccCCCCCCCCCChHHHH
Confidence 8999999999999999999999999999999998754321 111234443 38999999999653322346665333
Q ss_pred -cCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 155 -ELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 155 -~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.++++.+++|+...+ ... |+++.++..+.
T Consensus 197 ~~l~~~~~v~D~vY~P--~T~-ll~~A~~~G~~ 226 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF--LTP-FLSLAKELKTP 226 (269)
T ss_dssp HHHHHCSEEEESCCSS--CCH-HHHHHHHTTCC
T ss_pred hhCCCCCEEEEeCCCC--chH-HHHHHHHCcCE
Confidence 578899999999987 444 55555444443
No 151
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.44 E-value=7.5e-08 Score=91.56 Aligned_cols=112 Identities=13% Similarity=0.085 Sum_probs=77.6
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------------Cc-------------ccccChhhhhc
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------------LF-------------PYCANVYDLAV 129 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~~-------------~~~~~l~el~~ 129 (223)
=++|||||.|.||..+|..+...|++|++||++++... +. ....++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 35799999999999999999999999999999864321 10 112345 6688
Q ss_pred CCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCC
Q 035615 130 NSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFE 194 (223)
Q Consensus 130 ~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~ 194 (223)
+||+|+.++|...+.+..+-++..+.++++++|+..+.+ +....+.+.+.. .-...++..|.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-~~~~ig~hf~~ 454 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALKR-PENFVGMHFFN 454 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCSC-GGGEEEEECCS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhcC-ccceEEEEccC
Confidence 999999999987765544435666778999998744333 333455555532 12335666665
No 152
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.37 E-value=1.9e-07 Score=88.83 Aligned_cols=111 Identities=13% Similarity=0.061 Sum_probs=76.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------------C-------------cccccChhhhhcC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------------L-------------FPYCANVYDLAVN 130 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~-------------~~~~~~l~el~~~ 130 (223)
++|+|||.|.||..+|..+...|++|++||++++... + .....++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 6799999999999999999999999999998764211 1 0112445 56889
Q ss_pred CcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCC
Q 035615 131 SDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFE 194 (223)
Q Consensus 131 aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~ 194 (223)
||+|+.++|...+.+.-+-++..+.++++++|+..+.+ +....+.+.++.. -...+.+.|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~p-~~~iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKSQ-DRIVGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSCT-TTEEEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcCC-CCEEEecCCC
Confidence 99999999977665444435666778999988644333 3334555555321 1234666665
No 153
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.37 E-value=1.7e-06 Score=65.89 Aligned_cols=102 Identities=18% Similarity=0.143 Sum_probs=75.2
Q ss_pred CCCEEEEEec----ChHHHHHHHHHHhCCCEEEEEcCC--CCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHH
Q 035615 78 GGMQVGIVRL----GNIGSEVLNRLQAFGFIISYNSRR--KRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 78 ~g~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~--~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~ 151 (223)
+-++|+|||. |++|..+++.|+..|++|+..++. .....+...+.+++|+-...|++++++|. +....+++ +
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~-~ 89 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP-E 89 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH-H
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH-H
Confidence 4678999999 899999999999999997777766 33334555677899998899999999995 55666663 3
Q ss_pred HHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 152 VMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 152 ~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
..+ .....++++.+-. ++.+.+..++..+.
T Consensus 90 ~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 90 VLA-LRPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp HHH-HCCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred HHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 443 3334566554332 57788888877776
No 154
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.36 E-value=4.3e-07 Score=81.03 Aligned_cols=91 Identities=20% Similarity=0.243 Sum_probs=70.0
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCC---C--------CCCcccccChhhhhcCCcEEEEeccCChh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKR---P--------SVLFPYCANVYDLAVNSDVLVVCCALTEQ 143 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~---~--------~~~~~~~~~l~el~~~aDiv~~~~p~t~~ 143 (223)
.-|+||||+|||+|+-|++-|..|+..|.+|++--|... . ..++ ...+.+|++++||+|++.+|...+
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf-~v~~~~eA~~~ADvV~~L~PD~~q 111 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGF-KVGTYEELIPQADLVINLTPDKQH 111 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTC-EEEEHHHHGGGCSEEEECSCGGGH
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCC-EecCHHHHHHhCCEEEEeCChhhH
Confidence 348999999999999999999999999999876544211 1 1133 346789999999999999996544
Q ss_pred hhhccCHHHHhcCCCCcEEEEcCCCc
Q 035615 144 THHIINKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 144 t~~li~~~~l~~mk~ga~lIN~arg~ 169 (223)
. .+. ++....||+|+.|. .|.|=
T Consensus 112 ~-~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 112 S-DVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp H-HHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred H-HHH-HHHHhhCCCCCEEE-ecCcc
Confidence 3 344 46899999999877 55554
No 155
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.35 E-value=4.1e-08 Score=82.73 Aligned_cols=83 Identities=14% Similarity=0.029 Sum_probs=55.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEE-EEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFII-SYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V-~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
++|||||+|+||+.+++.|... ++| .+|+|++.... +. ...+++++++++|+|++++|... .. +.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~~-----~v 74 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-IK-----TV 74 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-HH-----HH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-HH-----HH
Confidence 4799999999999999999877 888 58998764321 22 34577788889999999999543 23 33
Q ss_pred HhcC-CCCcEEEEcCCCcc
Q 035615 153 MAEL-GKGGMIINVGRGAL 170 (223)
Q Consensus 153 l~~m-k~ga~lIN~arg~~ 170 (223)
+..+ +++.++||++-+-.
T Consensus 75 ~~~l~~~~~ivi~~s~~~~ 93 (276)
T 2i76_A 75 ANHLNLGDAVLVHCSGFLS 93 (276)
T ss_dssp HTTTCCSSCCEEECCSSSC
T ss_pred HHHhccCCCEEEECCCCCc
Confidence 3333 67899999985533
No 156
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.35 E-value=1.6e-07 Score=79.95 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=69.0
Q ss_pred CEEEEEecChHHHHHHHHHHhC-----C-CEEEEEcCCCCCC------CCcccc-------------cChhhhhcCCcEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-----G-FIISYNSRRKRPS------VLFPYC-------------ANVYDLAVNSDVL 134 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-----G-~~V~~~~~~~~~~------~~~~~~-------------~~l~el~~~aDiv 134 (223)
++|+|||+|.||..+|..|... | ++|.+++| ++.. .+.... .+..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5899999999999999999988 8 99999998 4321 111111 1233557899999
Q ss_pred EEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 035615 135 VVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGD 184 (223)
Q Consensus 135 ~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~ 184 (223)
++++|... +..++ ++....++++.++|.+..| +-.++.+.+.+.+.+
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDTV 134 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCc
Confidence 99999553 44444 3444567788999998776 222355555554433
No 157
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.35 E-value=2.5e-06 Score=65.20 Aligned_cols=101 Identities=10% Similarity=0.068 Sum_probs=74.6
Q ss_pred CCEEEEEec----ChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 79 GMQVGIVRL----GNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 79 g~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
-++|+|||. |++|..+++.|+..|++|+..++......+...+.+++|+....|++++++|. +....++. +..+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~-~~~~ 99 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE-QAIK 99 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH-HHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH-HHHH
Confidence 689999999 79999999999999999877777654334555677899998899999999985 45555553 3333
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 155 ELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 155 ~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.....++++. |. .++.+.+..++..+.
T Consensus 100 -~gi~~i~~~~--g~--~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 100 -KGAKVVWFQY--NT--YNREASKKADEAGLI 126 (144)
T ss_dssp -HTCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred -cCCCEEEECC--Cc--hHHHHHHHHHHcCCE
Confidence 2334555543 22 367788888887776
No 158
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.34 E-value=2.2e-06 Score=65.66 Aligned_cols=95 Identities=12% Similarity=-0.021 Sum_probs=62.5
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------Cccc----ccC---hhhh-hcCCcEEEEecc
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFPY----CAN---VYDL-AVNSDVLVVCCA 139 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~----~~~---l~el-~~~aDiv~~~~p 139 (223)
+....+++|.|+|+|.+|+.+++.|+..|++|+++++++.... +... ..+ +.+. +..+|+|++++|
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 4557789999999999999999999999999999998765322 1111 111 2233 567999999998
Q ss_pred CChhhhhccCHHHHhcCCCCcEEEEcCCCcc
Q 035615 140 LTEQTHHIINKDVMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~ga~lIN~arg~~ 170 (223)
....+..+ ....+.+.+...+|-..++.-
T Consensus 94 ~~~~~~~~--~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 94 DDSTNFFI--SMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp CHHHHHHH--HHHHHHTSCCSEEEEECSSGG
T ss_pred CcHHHHHH--HHHHHHHCCCCeEEEEECCHH
Confidence 54333222 234444555566666666553
No 159
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.34 E-value=2.9e-07 Score=72.45 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=63.6
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhC-CCEEEEEcCCCCCCC-----Cccc----ccC---hhhh--hcCCcEEEEecc
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAF-GFIISYNSRRKRPSV-----LFPY----CAN---VYDL--AVNSDVLVVCCA 139 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~-----~~~~----~~~---l~el--~~~aDiv~~~~p 139 (223)
.++.+++|+|+|+|.+|+.+++.|+.. |++|++++++++... +... ..+ +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 457788999999999999999999998 999999998765321 2211 112 3444 678999999998
Q ss_pred CChhhhhccCHHHHhcCCCCcEEEEcC
Q 035615 140 LTEQTHHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~ga~lIN~a 166 (223)
..+.+..++ ..++.+.+...+|...
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEE
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEE
Confidence 655444443 3556666666666543
No 160
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.29 E-value=4.6e-06 Score=71.53 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=74.2
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC---CC---------------cccccChhhhhcCCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS---VL---------------FPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~---~~---------------~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
++|+|||.|.||..+|..|...|.+|.+++|+.... .+ .....+.+++.+.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~~ 82 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVV 82 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCCC
Confidence 689999999999999999999999999999875210 01 111245667666899999999955
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.+...+ ++....+++++++|.+..|= -.++.+.+.+...++.
T Consensus 83 -~~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 83 -EGADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVI 124 (320)
T ss_dssp -TTCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEE
T ss_pred -ChHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEE
Confidence 334433 34455678889999888763 2346677777655554
No 161
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.29 E-value=5.6e-07 Score=77.83 Aligned_cols=105 Identities=15% Similarity=0.157 Sum_probs=74.3
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC----CCc-------------ccccChhhhhcCCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS----VLF-------------PYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----~~~-------------~~~~~l~el~~~aDiv~~~~p~t 141 (223)
.++|+|||.|.||..+|..|...|.+|.+++|..... .+. ....+.++ ++.+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 4689999999999999999999999999999852110 111 11245666 5889999999984
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcCCCc------------------ccCHHHHHHHHHcCCce
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVGRGA------------------LIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~arg~------------------~vd~~al~~aL~~~~i~ 186 (223)
..+..++ ++....+++++++|.+..|= +-.++.+.+.+...++.
T Consensus 81 ~~~~~~~-~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~ 142 (335)
T 3ghy_A 81 PALESVA-AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVL 142 (335)
T ss_dssp HHHHHHH-GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEE
T ss_pred hhHHHHH-HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEE
Confidence 4555554 23445577899999999882 22345677777555554
No 162
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.28 E-value=7e-07 Score=76.75 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=68.8
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----C-------------cccccChhhhhcCCcEEEEe
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----L-------------FPYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~-------------~~~~~~l~el~~~aDiv~~~ 137 (223)
....++|+|||.|.||..+|..|...|.+|.+| ++++..+ + .....++++ ++.+|+|+++
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vila 93 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFC 93 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEEC
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEE
Confidence 355789999999999999999999999999998 5543211 1 011234544 5899999999
Q ss_pred ccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 035615 138 CALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLV 181 (223)
Q Consensus 138 ~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~ 181 (223)
+|.. .++.++ ++....+++++++|.+..|=-. ++.+.+.+.
T Consensus 94 vk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~~-~~~l~~~~~ 134 (318)
T 3hwr_A 94 VKST-DTQSAA-LAMKPALAKSALVLSLQNGVEN-ADTLRSLLE 134 (318)
T ss_dssp CCGG-GHHHHH-HHHTTTSCTTCEEEEECSSSSH-HHHHHHHCC
T ss_pred cccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCCc-HHHHHHHcC
Confidence 9954 555554 3455567889999998777322 345556554
No 163
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.26 E-value=5.7e-07 Score=79.02 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=72.5
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----Cc-------ccccChhhhhcCCcEEEEeccCChhhh
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LF-------PYCANVYDLAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~-------~~~~~l~el~~~aDiv~~~~p~t~~t~ 145 (223)
=++++|+|+|+|.||+.+++.|... .+|.+++|+.++.. .. ....+++++++++|+|++++|..-. .
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~-~ 91 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG-F 91 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHH-H
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhh-H
Confidence 4589999999999999999999887 89999999875422 11 1134577889999999999884322 1
Q ss_pred hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 146 HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.+ ..+.++.|..+++++-- .-+..+|.+..++..+.
T Consensus 92 ~v----~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 92 KS----IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp HH----HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred HH----HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 12 23345788889998853 23445667776666665
No 164
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.24 E-value=3.6e-06 Score=72.41 Aligned_cols=82 Identities=20% Similarity=0.287 Sum_probs=64.2
Q ss_pred CCEEEEEecChHHHHHHHHHHh-CCC-EEEEEcCCCCCCC---------Cc--ccccChhhhhcCCcEEEEeccCChhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQA-FGF-IISYNSRRKRPSV---------LF--PYCANVYDLAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~-~G~-~V~~~~~~~~~~~---------~~--~~~~~l~el~~~aDiv~~~~p~t~~t~ 145 (223)
.++++|||.|.+|+.+++.+.. ++. +|.+|||+ +... +. ... +++++++++|+|++|+|.. .
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~---~ 195 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST---T 195 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---S
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---C
Confidence 6899999999999999999875 454 69999999 3221 11 123 8899999999999999864 4
Q ss_pred hccCHHHHhcCCCCcEEEEcCCC
Q 035615 146 HIINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~arg 168 (223)
.++.. +.+|+|+.+++++..
T Consensus 196 pvl~~---~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 196 PLFAG---QALRAGAFVGAIGSS 215 (313)
T ss_dssp CSSCG---GGCCTTCEEEECCCS
T ss_pred cccCH---HHcCCCcEEEECCCC
Confidence 56654 357999999999864
No 165
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.24 E-value=2e-06 Score=63.95 Aligned_cols=85 Identities=18% Similarity=0.197 Sum_probs=56.9
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------Cccc----ccChh---hh-hcCCcEEEEeccCChhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFPY----CANVY---DL-AVNSDVLVVCCALTEQT 144 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~----~~~l~---el-~~~aDiv~~~~p~t~~t 144 (223)
+++|+|+|+|.+|+.+++.|...|++|.+++++++... +... ..+.+ +. +.++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57899999999999999999999999999998754321 2111 11222 22 57899999999854332
Q ss_pred hhccCHHHHhcCCCCcEEEEc
Q 035615 145 HHIINKDVMAELGKGGMIINV 165 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~ 165 (223)
..+ ....+.++++.+++-+
T Consensus 84 ~~~--~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 LMS--SLLAKSYGINKTIARI 102 (140)
T ss_dssp HHH--HHHHHHTTCCCEEEEC
T ss_pred HHH--HHHHHHcCCCEEEEEe
Confidence 222 3345567777666543
No 166
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.22 E-value=5.2e-06 Score=70.94 Aligned_cols=105 Identities=16% Similarity=0.126 Sum_probs=72.8
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC---CCc--------------ccccChhhhhcCCcEEEEeccCCh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS---VLF--------------PYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~---~~~--------------~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
++|+|||.|.||..+|..|...|.+|.+++|+.... .+. ....+.++ ++.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~- 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTF- 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCC-
Confidence 579999999999999999999999999999875210 010 01234444 67899999999844
Q ss_pred hhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 035615 143 QTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGV 188 (223)
Q Consensus 143 ~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a 188 (223)
.++..+ ++.-..+++++++|.+..|= -.++.+.+.+...++.+.
T Consensus 81 ~~~~~l-~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 81 ANSRYE-ELIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIGG 124 (312)
T ss_dssp GGGGHH-HHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEEE
T ss_pred CcHHHH-HHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEEE
Confidence 344443 34455678899999988772 235667777765555443
No 167
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.21 E-value=7.8e-06 Score=72.03 Aligned_cols=92 Identities=11% Similarity=0.181 Sum_probs=74.4
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCC----CCCC----C-----------CcccccChhhhhcCCcE
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRR----KRPS----V-----------LFPYCANVYDLAVNSDV 133 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~----~~~~----~-----------~~~~~~~l~el~~~aDi 133 (223)
+..+++.+|.|+|.|.+|..+|+.+.+.|. +|+.+|++ .... . ......+|+|.++.+|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 346889999999999999999999999999 79999987 3321 1 01124579999999999
Q ss_pred EEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcc
Q 035615 134 LVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 134 v~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~ 170 (223)
++-+. . -++|+++.++.|+++.+++.+|+-..
T Consensus 267 lIG~S--a---p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 267 FIGVS--R---GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp EEECS--C---SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred EEEeC--C---CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 87763 1 38999999999999999999997553
No 168
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.20 E-value=1.3e-06 Score=77.34 Aligned_cols=83 Identities=18% Similarity=0.238 Sum_probs=68.7
Q ss_pred CCCEEEEEec-ChHHHHHHHHHHhCCC---EEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHH
Q 035615 78 GGMQVGIVRL-GNIGSEVLNRLQAFGF---IISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 78 ~g~~vgIiG~-G~iG~~~a~~l~~~G~---~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
...+|.|||. |..|+..++.++++|+ .|..+|++.... +.. + +.+.++|+|+.++......-.+|+++.+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~-g~~----~-~~i~~aDivIn~vlig~~aP~Lvt~e~v 286 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR-GGP----F-DEIPQADIFINCIYLSKPIAPFTNMEKL 286 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT-CSC----C-THHHHSSEEEECCCCCSSCCCSCCHHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc-CCc----h-hhHhhCCEEEECcCcCCCCCcccCHHHH
Confidence 3568999999 9999999999999998 899999865222 111 2 3456899999999986666688999999
Q ss_pred hcC-CCCcEEEEcC
Q 035615 154 AEL-GKGGMIINVG 166 (223)
Q Consensus 154 ~~m-k~ga~lIN~a 166 (223)
+.| |||++|||++
T Consensus 287 ~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 287 NNPNRRLRTVVDVS 300 (394)
T ss_dssp CCTTCCCCEEEETT
T ss_pred hcCcCCCeEEEEEe
Confidence 999 9999999997
No 169
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.20 E-value=2.9e-06 Score=74.09 Aligned_cols=87 Identities=14% Similarity=0.092 Sum_probs=65.9
Q ss_pred CCCEEEEEecChHHHHHHHHHH-hCC-CEEEEEcCCCCCCC----------C--cccccChhhhhcCCcEEEEeccCChh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQ-AFG-FIISYNSRRKRPSV----------L--FPYCANVYDLAVNSDVLVVCCALTEQ 143 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~-~~G-~~V~~~~~~~~~~~----------~--~~~~~~l~el~~~aDiv~~~~p~t~~ 143 (223)
..++++|||.|.+|+.+++.+. ..+ .+|.+|||++++.+ + ...+.+++++++++|+|++++|.. .
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~-~ 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADK-A 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCS-S
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCC-C
Confidence 3679999999999999998875 344 47999999865421 2 223568899999999999999965 2
Q ss_pred hhhccCHHHHhcCCCCcEEEEcCCC
Q 035615 144 THHIINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 144 t~~li~~~~l~~mk~ga~lIN~arg 168 (223)
...++.. +.+++|..+++++..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 3445554 457899999999864
No 170
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.19 E-value=1.6e-06 Score=62.53 Aligned_cols=84 Identities=13% Similarity=0.107 Sum_probs=57.5
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCC-CEEEEEcCCCCCCC-----Cc-------ccccChhhhhcCCcEEEEeccCChhh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFG-FIISYNSRRKRPSV-----LF-------PYCANVYDLAVNSDVLVVCCALTEQT 144 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~~-----~~-------~~~~~l~el~~~aDiv~~~~p~t~~t 144 (223)
.+++|+|+|.|.||+.+++.|...| ++|.+++|++.... +. ....++.++++.+|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 4689999999999999999999999 89999998764321 11 112345567889999999987432 2
Q ss_pred hhccCHHHHhcCCCCcEEEEcC
Q 035615 145 HHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~a 166 (223)
..++. ...+.|...++++
T Consensus 83 ~~~~~----~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAK----AAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHH----HHHHTTCEEECCC
T ss_pred HHHHH----HHHHhCCCEEEec
Confidence 22211 1124566677765
No 171
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.19 E-value=1e-06 Score=66.50 Aligned_cols=85 Identities=14% Similarity=0.012 Sum_probs=58.8
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc----ccC---hhhh-hcCCcEEEEeccCChhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY----CAN---VYDL-AVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~----~~~---l~el-~~~aDiv~~~~p~t~~t~ 145 (223)
..++.|+|+|.+|+.+++.|+..|++|++++++++... +... ..+ +.++ +.++|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 45799999999999999999999999999998875421 2211 111 2222 568999999999665554
Q ss_pred hccCHHHHhcCCCCcEEEEc
Q 035615 146 HIINKDVMAELGKGGMIINV 165 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~ 165 (223)
.++ ..++.+.++..+|-.
T Consensus 87 ~~~--~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIAR 104 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEE
T ss_pred HHH--HHHHHHCCCCeEEEE
Confidence 442 345556666666643
No 172
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.15 E-value=2e-06 Score=72.90 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=73.7
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCC---------cccccChhhhhcCCcEEEEeccCChh
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVL---------FPYCANVYDLAVNSDVLVVCCALTEQ 143 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~---------~~~~~~l~el~~~aDiv~~~~p~t~~ 143 (223)
+.++.++++.|+|.|.+|++++..|...|+ +|.+++|+.++.+. .....+++++..++|+|+.++|..-.
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~ 200 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLD 200 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC-
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCC
Confidence 346789999999999999999999999997 89999998754221 01233566666889999999996532
Q ss_pred hh-hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 144 TH-HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 144 t~-~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
.. ..++. +.++++.+++++.-.+ .... +++..++.
T Consensus 201 ~~~~~l~~---~~l~~~~~V~DlvY~P-~~T~-ll~~A~~~ 236 (281)
T 3o8q_A 201 GELPAIDP---VIFSSRSVCYDMMYGK-GYTV-FNQWARQH 236 (281)
T ss_dssp ---CSCCG---GGEEEEEEEEESCCCS-SCCH-HHHHHHHT
T ss_pred CCCCCCCH---HHhCcCCEEEEecCCC-ccCH-HHHHHHHC
Confidence 21 23443 3467899999998765 3344 44444443
No 173
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.12 E-value=1.7e-06 Score=72.80 Aligned_cols=106 Identities=12% Similarity=0.067 Sum_probs=70.7
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc---------ccccChhhhhc-CCcEEEEeccCChhh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLF---------PYCANVYDLAV-NSDVLVVCCALTEQT 144 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~---------~~~~~l~el~~-~aDiv~~~~p~t~~t 144 (223)
.++.+++++|+|.|.+|++++..|...|.+|.+++|+.++.... ....+++++.+ ++|+|+.++|.....
T Consensus 115 ~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~ 194 (272)
T 1p77_A 115 WLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSG 194 (272)
T ss_dssp CCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC----
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCC
Confidence 35789999999999999999999999999999999986432210 11223444434 899999999865321
Q ss_pred h-hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 145 H-HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 145 ~-~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
. .-++.+. ++++.+++|+.-.+..+..-+.++-+.|
T Consensus 195 ~~~~i~~~~---l~~~~~v~D~~y~p~~~t~ll~~a~~~G 231 (272)
T 1p77_A 195 GTASVDAEI---LKLGSAFYDMQYAKGTDTPFIALCKSLG 231 (272)
T ss_dssp ---CCCHHH---HHHCSCEEESCCCTTSCCHHHHHHHHTT
T ss_pred CCCCCCHHH---cCCCCEEEEeeCCCCcCCHHHHHHHHcC
Confidence 1 0134343 3578899999987655455444444444
No 174
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.10 E-value=1.9e-06 Score=76.15 Aligned_cols=84 Identities=8% Similarity=0.035 Sum_probs=61.0
Q ss_pred CEEEEEecChHHHHHHHHHHh-CCCEEEEEc---CCCCC------CCC---------c----------ccccChhhhhcC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQA-FGFIISYNS---RRKRP------SVL---------F----------PYCANVYDLAVN 130 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~-~G~~V~~~~---~~~~~------~~~---------~----------~~~~~l~el~~~ 130 (223)
++|+|||.|.||..+|..|.. .|++|.+|+ |+++. ..+ . ....++++.++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 589999999999999999977 599999999 54211 001 1 023467788899
Q ss_pred CcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEc
Q 035615 131 SDVLVVCCALTEQTHHIINKDVMAELGKGGMIINV 165 (223)
Q Consensus 131 aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~ 165 (223)
+|+|++++|.. ..+.++ ++....+++++++|..
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999944 344444 3444567888999985
No 175
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.09 E-value=3e-06 Score=63.13 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=57.9
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC-----CCccc----ccC---hhhh-hcCCcEEEEeccCChh
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS-----VLFPY----CAN---VYDL-AVNSDVLVVCCALTEQ 143 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~----~~~---l~el-~~~aDiv~~~~p~t~~ 143 (223)
+.+++|.|+|+|.+|+.+++.|...|++|+++++++... .+... ..+ +.++ +..+|+|+.++|...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 567889999999999999999999999999998765321 11111 112 2233 5689999999986422
Q ss_pred hhhccCHHHHhcCCCCcEEEEcCCCc
Q 035615 144 THHIINKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 144 t~~li~~~~l~~mk~ga~lIN~arg~ 169 (223)
....+ ....+.+.+. .+|-..++.
T Consensus 84 ~~~~~-~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 ASTLT-TLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HHHHH-HHHHHHTTCS-EEEEECCSH
T ss_pred HHHHH-HHHHHHcCCC-eEEEEeCCH
Confidence 22111 3344556665 555555444
No 176
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=98.09 E-value=1.3e-05 Score=68.22 Aligned_cols=79 Identities=18% Similarity=0.319 Sum_probs=65.0
Q ss_pred ccccCCCEEEEEecC-hHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 74 GFKLGGMQVGIVRLG-NIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G-~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
+.+++||++.|||-+ .+|+.+|..|...+++|..+.... .++.+..++||+|+.++. .-+++..++
T Consensus 174 ~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T---------~dl~~~~~~ADIvV~A~G----~p~~i~~d~ 240 (303)
T 4b4u_A 174 NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT---------QNLPELVKQADIIVGAVG----KAELIQKDW 240 (303)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------SSHHHHHHTCSEEEECSC----STTCBCGGG
T ss_pred CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC---------CCHHHHhhcCCeEEeccC----CCCcccccc
Confidence 346999999999975 469999999999999998876432 478999999999999875 345777765
Q ss_pred HhcCCCCcEEEEcCCC
Q 035615 153 MAELGKGGMIINVGRG 168 (223)
Q Consensus 153 l~~mk~ga~lIN~arg 168 (223)
.|+|+++||+|--
T Consensus 241 ---vk~GavVIDVGin 253 (303)
T 4b4u_A 241 ---IKQGAVVVDAGFH 253 (303)
T ss_dssp ---SCTTCEEEECCCB
T ss_pred ---ccCCCEEEEecee
Confidence 5899999999843
No 177
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.08 E-value=4.2e-06 Score=72.22 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=80.7
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------------C----------cccccChhhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV--------------------L----------FPYCANVYDLA 128 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------------~----------~~~~~~l~el~ 128 (223)
-.+|+|||.|.||+.+|..+...|++|..+|++++... + .....++++.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 56899999999999999999999999999998764210 0 01246788899
Q ss_pred cCCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCC
Q 035615 129 VNSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFEN 195 (223)
Q Consensus 129 ~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~ 195 (223)
+.||+|+=++|.+-+.+.-+-++.=+.++++++|-..+.+ +....|.+.++. .-+..++--|.+
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP 149 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNP 149 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSS
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCC
Confidence 9999999999988776665556666678899987644333 445666666543 223345554433
No 178
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.08 E-value=1.2e-06 Score=74.39 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=64.8
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cc---ccccChhhhh-cCCcEEEEeccCChhhhhccCH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LF---PYCANVYDLA-VNSDVLVVCCALTEQTHHIINK 150 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~---~~~~~l~el~-~~aDiv~~~~p~t~~t~~li~~ 150 (223)
++|+|||.|.||..+|..|...|.+|.+++|+.+... +. ....+..+.+ ..+|+|++++|.. .++..+ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 6899999999999999999988999999998754211 11 0112333444 7899999999844 455554 3
Q ss_pred HHHhcCCCCcEEEEcCCCcccC
Q 035615 151 DVMAELGKGGMIINVGRGALID 172 (223)
Q Consensus 151 ~~l~~mk~ga~lIN~arg~~vd 172 (223)
+....+++++++|.+.-|=-..
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCCG
T ss_pred HHHHhhCCCCEEEEeccCcccH
Confidence 3445567788999998875443
No 179
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.07 E-value=6e-06 Score=69.37 Aligned_cols=103 Identities=12% Similarity=0.079 Sum_probs=69.8
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc---------ccccChhhhh-cCCcEEEEeccCChhhh
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLF---------PYCANVYDLA-VNSDVLVVCCALTEQTH 145 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~---------~~~~~l~el~-~~aDiv~~~~p~t~~t~ 145 (223)
++.|+++.|+|.|.+|+++++.|...|.+|++++|+.++.... ....+++++. ..+|+|+.++|......
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~ 195 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGD 195 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCC
Confidence 5789999999999999999999999999999999986432100 1112333443 58999999998653311
Q ss_pred -hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 146 -HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 146 -~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
.-+..+ .++++.+++|+.-.... .. +.+..++.
T Consensus 196 ~~~i~~~---~l~~~~~v~D~~y~p~~-t~-~~~~a~~~ 229 (271)
T 1nyt_A 196 IPAIPSS---LIHPGIYCYDMFYQKGK-TP-FLAWCEQR 229 (271)
T ss_dssp CCCCCGG---GCCTTCEEEESCCCSSC-CH-HHHHHHHT
T ss_pred CCCCCHH---HcCCCCEEEEeccCCcC-CH-HHHHHHHc
Confidence 013332 35789999999887532 23 44444443
No 180
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.07 E-value=6.7e-06 Score=72.79 Aligned_cols=88 Identities=13% Similarity=0.115 Sum_probs=65.8
Q ss_pred CEEEEEecChHHHHHHHHHHhCC--------CEEEEEcCCCCCC------------------CC------cccccChhhh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFG--------FIISYNSRRKRPS------------------VL------FPYCANVYDL 127 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G--------~~V~~~~~~~~~~------------------~~------~~~~~~l~el 127 (223)
.+|+|||.|.+|.++|+.|...| .+|..|.|.++.. .+ .....++++.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~a 114 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDS 114 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHH
Confidence 38999999999999999997644 3588887764310 01 1234688999
Q ss_pred hcCCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCc
Q 035615 128 AVNSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 128 ~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~ 169 (223)
++.+|+|++++| +...+.++ ++....++++..+|+++.|=
T Consensus 115 l~~ad~ii~avP-s~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 115 VKDVDIIVFNIP-HQFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp HTTCSEEEECSC-GGGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred HhcCCEEEEECC-hhhhHHHH-HHhccccCCCceeEEecccc
Confidence 999999999999 44555554 34555678899999999884
No 181
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.06 E-value=9.5e-06 Score=69.96 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=63.9
Q ss_pred CCCEEEEEecChHHHHHHHHHHh-CC-CEEEEEcCCCCCCC-----------CcccccChhhhhcCCcEEEEeccCChhh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQA-FG-FIISYNSRRKRPSV-----------LFPYCANVYDLAVNSDVLVVCCALTEQT 144 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~-~G-~~V~~~~~~~~~~~-----------~~~~~~~l~el~~~aDiv~~~~p~t~~t 144 (223)
..++++|||.|.+|+.+++.+.. .+ .+|.+|||++++.+ ... +.++++++ ++|+|++++|..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~--- 198 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSR--- 198 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCS---
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCC---
Confidence 36799999999999999998876 44 46899999875432 122 56888999 999999999954
Q ss_pred hhccCHHHHhcCCCCcEEEEcCCC
Q 035615 145 HHIINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~arg 168 (223)
..++.. +.+++|..+++++.-
T Consensus 199 ~pv~~~---~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 199 KPVVKA---EWVEEGTHINAIGAD 219 (322)
T ss_dssp SCCBCG---GGCCTTCEEEECSCC
T ss_pred CceecH---HHcCCCeEEEECCCC
Confidence 355543 457899999999643
No 182
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.05 E-value=5e-06 Score=71.34 Aligned_cols=101 Identities=8% Similarity=0.082 Sum_probs=67.9
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCC-----------------cccccChhhhhcCCcEEEEeccC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVL-----------------FPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
.++|+|||.|.||..+|..+...|+ +|..+|++++..+. .....++ +.++.||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999988888 99999988653221 1112455 678999999999832
Q ss_pred Ch-----------hhhhccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 035615 141 TE-----------QTHHIIN--KDVMAELGKGGMIINVGRGALIDEKEMLQFL 180 (223)
Q Consensus 141 t~-----------~t~~li~--~~~l~~mk~ga~lIN~arg~~vd~~al~~aL 180 (223)
.. ++..++. .+.+....+++++|+++...-+....+.+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 11 1111110 1122233569999999886655556666654
No 183
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.04 E-value=8.7e-06 Score=68.67 Aligned_cols=106 Identities=14% Similarity=0.076 Sum_probs=73.0
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCCc--------ccccChhhhh-cCCcEEEEeccCChh
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVLF--------PYCANVYDLA-VNSDVLVVCCALTEQ 143 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~~--------~~~~~l~el~-~~aDiv~~~~p~t~~ 143 (223)
+.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++.+.. ....+++++- .++|+|+.++|..-.
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 345789999999999999999999999997 899999987543210 1122344443 789999999985432
Q ss_pred hh-hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 144 TH-HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 144 t~-~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
.. ..+.. +.++++.+++++.-.+. .+.-|.+|-+.|
T Consensus 195 ~~~~~i~~---~~l~~~~~V~DlvY~P~-~T~ll~~A~~~G 231 (272)
T 3pwz_A 195 ADLPPLPA---DVLGEAALAYELAYGKG-LTPFLRLAREQG 231 (272)
T ss_dssp TCCCCCCG---GGGTTCSEEEESSCSCC-SCHHHHHHHHHS
T ss_pred CCCCCCCH---HHhCcCCEEEEeecCCC-CCHHHHHHHHCC
Confidence 11 12443 34678999999987643 344444454444
No 184
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.03 E-value=5.3e-06 Score=74.54 Aligned_cols=132 Identities=9% Similarity=0.102 Sum_probs=83.7
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC------------CC-------------cccccChhhhhcCCc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS------------VL-------------FPYCANVYDLAVNSD 132 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------------~~-------------~~~~~~l~el~~~aD 132 (223)
+-.+|+|||+|-+|..+|..+...|++|+++|.++++. .+ .....+.++.++.||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 45699999999999999999999999999999775321 00 112456788899999
Q ss_pred EEEEeccCChhh-h------hccC--HHHHhcCC---CCcEEEEcCCCcccCHHHHH-HHHHcCCceEEEee-CCCCCCC
Q 035615 133 VLVVCCALTEQT-H------HIIN--KDVMAELG---KGGMIINVGRGALIDEKEML-QFLVQGDINGVGLD-VFENDPN 198 (223)
Q Consensus 133 iv~~~~p~t~~t-~------~li~--~~~l~~mk---~ga~lIN~arg~~vd~~al~-~aL~~~~i~~a~lD-V~~~EP~ 198 (223)
++++|+| ||.. . .+.. +...+.|+ ++.++|.-|.-.+=-.+.+. ..|++.. .+.-.+ +|.+|-+
T Consensus 100 ~~~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~~~PErl 177 (444)
T 3vtf_A 100 ATFIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVASNPEFL 177 (444)
T ss_dssp EEEECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEEECCCCC
T ss_pred ceEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceeecCcccc
Confidence 9999998 3321 1 1111 22233343 67899998887664444443 3343322 111112 3567765
Q ss_pred CCC----CCCCCCceEE
Q 035615 199 VPK----EPLRLDNIVL 211 (223)
Q Consensus 199 ~~~----~l~~~~nv~~ 211 (223)
.+. .+...++|++
T Consensus 178 ~eG~a~~d~~~~~riVi 194 (444)
T 3vtf_A 178 REGSALEDFFKPDRIVI 194 (444)
T ss_dssp CTTSHHHHHHSCSCEEE
T ss_pred cCCccccccccCCcEEE
Confidence 543 3666677764
No 185
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.99 E-value=4.2e-06 Score=62.83 Aligned_cols=85 Identities=12% Similarity=0.053 Sum_probs=54.5
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc----ccC---hhhh-hcCCcEEEEeccCChhh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY----CAN---VYDL-AVNSDVLVVCCALTEQT 144 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~----~~~---l~el-~~~aDiv~~~~p~t~~t 144 (223)
.++++.|+|+|.+|+.+++.|...|++|++++++++... +... ..+ +.++ +.++|+|++++|..+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 467899999999999999999999999999998765321 1110 112 2222 46899999999833322
Q ss_pred hhccCHHHHhcCCCCcEEEE
Q 035615 145 HHIINKDVMAELGKGGMIIN 164 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN 164 (223)
. .-....+.+....+++-
T Consensus 85 ~--~~~~~a~~~~~~~iia~ 102 (141)
T 3llv_A 85 L--KILKALRSVSDVYAIVR 102 (141)
T ss_dssp H--HHHHHHHHHCCCCEEEE
T ss_pred H--HHHHHHHHhCCceEEEE
Confidence 2 22334444453344443
No 186
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.96 E-value=3.1e-05 Score=64.50 Aligned_cols=100 Identities=18% Similarity=0.234 Sum_probs=70.9
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEE-EEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhcC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFII-SYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAEL 156 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V-~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~m 156 (223)
.-++|+++|+|+||+.+++. . ++++ .+|+ ......+.....++++++.+.|+|+-|.+ .+ -+.+...+.|
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k~gelgv~a~~d~d~lla~pD~VVe~A~-~~----av~e~~~~iL 81 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RISKDIPGVVRLDEFQVPSDVSTVVECAS-PE----AVKEYSLQIL 81 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SSCCCCSSSEECSSCCCCTTCCEEEECSC-HH----HHHHHHHHHT
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-ccccccCceeeCCHHHHhhCCCEEEECCC-HH----HHHHHHHHHH
Confidence 46899999999999999998 4 8875 4666 11111133446789999989999987764 22 2333355668
Q ss_pred CCCcEEEEcCCCcccCH---HHHHHHHHcCCce
Q 035615 157 GKGGMIINVGRGALIDE---KEMLQFLVQGDIN 186 (223)
Q Consensus 157 k~ga~lIN~arg~~vd~---~al~~aL~~~~i~ 186 (223)
+.|.-+|-+|-|.+.|+ +.|.++-++|.-.
T Consensus 82 ~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 82 KNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp TSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred HCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 89999999999988887 4555666665544
No 187
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.92 E-value=3.9e-05 Score=63.62 Aligned_cols=80 Identities=11% Similarity=0.154 Sum_probs=56.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEE-EEcCCCCCCCCcccccChhhhhcCCcEEEEec-cCChhhhhccCHHHHhcCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIIS-YNSRRKRPSVLFPYCANVYDLAVNSDVLVVCC-ALTEQTHHIINKDVMAELG 157 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~-p~t~~t~~li~~~~l~~mk 157 (223)
++|+|+|+|+||+.+++.+...+.++. ++++......+...+.++++++ ++|+++-.. | ..+.. .+. ++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~DVvIDft~p--~a~~~-----~~~-l~ 74 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GADVAIDFSNP--NLLFP-----LLD-ED 74 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCSEEEECSCH--HHHHH-----HHT-SC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCCEEEEeCCh--HHHHH-----HHH-Hh
Confidence 689999999999999999987755755 5788766544555667888988 999987433 3 22222 233 67
Q ss_pred CCcEEEEcCCC
Q 035615 158 KGGMIINVGRG 168 (223)
Q Consensus 158 ~ga~lIN~arg 168 (223)
.|.-+|....|
T Consensus 75 ~g~~vVigTTG 85 (243)
T 3qy9_A 75 FHLPLVVATTG 85 (243)
T ss_dssp CCCCEEECCCS
T ss_pred cCCceEeCCCC
Confidence 77767765566
No 188
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.92 E-value=1.2e-05 Score=68.75 Aligned_cols=61 Identities=20% Similarity=0.213 Sum_probs=47.2
Q ss_pred CEEEEEecChHHHHHHHHHHhCC--CEEEEEcCCCCCCC---------------Cccc-ccChhhhhcCCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFG--FIISYNSRRKRPSV---------------LFPY-CANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G--~~V~~~~~~~~~~~---------------~~~~-~~~l~el~~~aDiv~~~~p~t 141 (223)
++|+|||.|.||..+|..|...| .+|..+|++++... .... ..+. +.++.||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998878 68999998764321 0111 2455 6788999999999854
No 189
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.92 E-value=1.7e-05 Score=67.27 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=71.2
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC----Cc--ccccChhhhhcCCcEEEEeccCC--hhhh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV----LF--PYCANVYDLAVNSDVLVVCCALT--EQTH 145 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~----~~--~~~~~l~el~~~aDiv~~~~p~t--~~t~ 145 (223)
.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++.+ .. ..+.++++ + ++|+|+.++|.. +...
T Consensus 118 ~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~ 195 (282)
T 3fbt_A 118 VEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEG 195 (282)
T ss_dssp CCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTT
T ss_pred CCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCc
Confidence 45789999999999999999999999999 8999999875432 11 11233444 4 899999999863 2211
Q ss_pred -hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 035615 146 -HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDI 185 (223)
Q Consensus 146 -~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i 185 (223)
-.++.+. ++++.+++++.-.+. . ..|+++-++..+
T Consensus 196 ~~pi~~~~---l~~~~~v~DlvY~P~-~-T~ll~~A~~~G~ 231 (282)
T 3fbt_A 196 ESPVDKEV---VAKFSSAVDLIYNPV-E-TLFLKYARESGV 231 (282)
T ss_dssp CCSSCHHH---HTTCSEEEESCCSSS-S-CHHHHHHHHTTC
T ss_pred cCCCCHHH---cCCCCEEEEEeeCCC-C-CHHHHHHHHCcC
Confidence 1245444 478899999876553 2 344444444433
No 190
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.90 E-value=1.5e-05 Score=67.66 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=68.1
Q ss_pred CCEEEEEecChHHHH-HHHHHHh-CCCEEE-EEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 79 GMQVGIVRLGNIGSE-VLNRLQA-FGFIIS-YNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 79 g~~vgIiG~G~iG~~-~a~~l~~-~G~~V~-~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
..+|||||+|.||+. .++.++. -++++. ++|++++... +...+.++++++++.|+|++++|........
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~-- 83 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEII-- 83 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHH--
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHH--
Confidence 468999999999996 8888876 477876 7888765432 3334789999999999999999954332222
Q ss_pred HHHHhcCCCCc-EEEE-cCCCcccCHHHHHHHHHcCCce
Q 035615 150 KDVMAELGKGG-MIIN-VGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 150 ~~~l~~mk~ga-~lIN-~arg~~vd~~al~~aL~~~~i~ 186 (223)
... ++.|. +++. -.--.+-+.+.|.++.++.++.
T Consensus 84 ~~a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 84 KIL---LNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp HHH---HHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HHH---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 223 33443 4443 2233444566677777665543
No 191
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.89 E-value=3.7e-05 Score=65.61 Aligned_cols=103 Identities=19% Similarity=0.317 Sum_probs=68.5
Q ss_pred CCEEEEEecChHHHH-HHHHHHh-CCCEEE-EEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhhhhccC
Q 035615 79 GMQVGIVRLGNIGSE-VLNRLQA-FGFIIS-YNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 79 g~~vgIiG~G~iG~~-~a~~l~~-~G~~V~-~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~ 149 (223)
-.+|||||+|.||+. +++.+.. -++++. ++|+++.... +...+.+.+++..+.|+|++++|.......
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~--- 81 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDV--- 81 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHH---
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHH---
Confidence 358999999999997 8888865 477865 7888876532 223456777776789999999995433222
Q ss_pred HHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCce
Q 035615 150 KDVMAELGKGG-MIINV-GRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 150 ~~~l~~mk~ga-~lIN~-arg~~vd~~al~~aL~~~~i~ 186 (223)
....++.|. +++.- .-..+-+.+.|.++.++..+.
T Consensus 82 --~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 82 --VSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp --HHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 222345565 55542 223445566788888776665
No 192
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.89 E-value=2.5e-05 Score=66.20 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=73.8
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCC-------------ccc--ccChhhhhcCCcEEEEec
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVL-------------FPY--CANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~-------------~~~--~~~l~el~~~aDiv~~~~ 138 (223)
.+++++++.|+|.|.+|++++..|...|+ +|.+++|+.++.+. ... ..++++.++++|+|+.++
T Consensus 123 ~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 123 PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp TTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 35789999999999999999999999999 69999998654321 001 236778888999999999
Q ss_pred cCChhhh--hccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 139 ALTEQTH--HIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 139 p~t~~t~--~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
|..-... -.++ .+.++++.+++++.-.+. ...-|.+|-+.|
T Consensus 203 p~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P~-~T~ll~~A~~~G 245 (283)
T 3jyo_A 203 PMGMPAHPGTAFD---VSCLTKDHWVGDVVYMPI-ETELLKAARALG 245 (283)
T ss_dssp STTSTTSCSCSSC---GGGCCTTCEEEECCCSSS-SCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCC---HHHhCCCCEEEEecCCCC-CCHHHHHHHHCc
Confidence 8542111 1233 245688899999877653 344444444444
No 193
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.87 E-value=9.7e-05 Score=65.18 Aligned_cols=92 Identities=10% Similarity=0.116 Sum_probs=73.6
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCC-------CCCCCc-----------ccccChhhhhcCCcEE
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRK-------RPSVLF-----------PYCANVYDLAVNSDVL 134 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~-------~~~~~~-----------~~~~~l~el~~~aDiv 134 (223)
+..++..+|.|+|.|..|..+|+.+.++|. +|+.+|+.. ...... ....+|+|.++.+|++
T Consensus 183 g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~ 262 (398)
T 2a9f_A 183 KKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIF 262 (398)
T ss_dssp TCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSE
T ss_pred CCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEE
Confidence 456889999999999999999999999999 899998763 111111 0134699999999987
Q ss_pred EEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcc
Q 035615 135 VVCCALTEQTHHIINKDVMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 135 ~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~ 170 (223)
+=.- .-++++++.++.|+++++++.+|+-..
T Consensus 263 IG~S-----apgl~T~EmVk~Ma~~pIIfalsNPt~ 293 (398)
T 2a9f_A 263 IGVS-----APGVLKAEWISKMAARPVIFAMANPIP 293 (398)
T ss_dssp EECC-----STTCCCHHHHHTSCSSCEEEECCSSSC
T ss_pred EecC-----CCCCCCHHHHHhhCCCCEEEECCCCCc
Confidence 6542 358999999999999999999998653
No 194
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.86 E-value=2.9e-05 Score=66.77 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=71.6
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCC---CCC----------C--c--cccc---ChhhhhcCCc
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKR---PSV----------L--F--PYCA---NVYDLAVNSD 132 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~---~~~----------~--~--~~~~---~l~el~~~aD 132 (223)
+.+++|+++.|+|.|.+|++++..|...|+ +|.+++|+.+ +.+ + . .... ++.+.+.++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 346889999999999999999999999999 8999999832 211 0 0 0112 2456678999
Q ss_pred EEEEeccCC--hhhhh-ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 035615 133 VLVVCCALT--EQTHH-IINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDI 185 (223)
Q Consensus 133 iv~~~~p~t--~~t~~-li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i 185 (223)
+|+.++|.. +.... .+. ....++++.+++++.-.+. .. .|+++-++..+
T Consensus 229 iIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P~-~T-~ll~~A~~~G~ 280 (315)
T 3tnl_A 229 IFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKPT-KT-RLLEIAEEQGC 280 (315)
T ss_dssp EEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSSS-SC-HHHHHHHHTTC
T ss_pred EEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCCC-CC-HHHHHHHHCCC
Confidence 999999854 21111 121 2234688999999987654 33 34444444333
No 195
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.86 E-value=2.3e-05 Score=67.26 Aligned_cols=62 Identities=11% Similarity=0.193 Sum_probs=49.9
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------CcccccChhhhhc--CCcEEEEeccCCh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LFPYCANVYDLAV--NSDVLVVCCALTE 142 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~~~~~~l~el~~--~aDiv~~~~p~t~ 142 (223)
.+|||||+|.||+..++.+... ++++. ++|+++.... +.. +.+++++++ +.|+|++++|...
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~ 75 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDT 75 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchh
Confidence 5899999999999999999875 78866 6888765422 334 789999998 8999999998543
No 196
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.85 E-value=3.4e-05 Score=66.51 Aligned_cols=63 Identities=11% Similarity=0.091 Sum_probs=50.5
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------CcccccChhhhhc--CCcEEEEeccCCh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LFPYCANVYDLAV--NSDVLVVCCALTE 142 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~~~~~~l~el~~--~aDiv~~~~p~t~ 142 (223)
.+|||||+|.||+..++.++.. ++++. ++|+++.... +...+.+++++++ +.|+|++++|...
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 77 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTST 77 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchh
Confidence 5899999999999999999876 77865 6888764321 3445789999998 8999999998543
No 197
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.84 E-value=4.8e-05 Score=68.21 Aligned_cols=106 Identities=12% Similarity=0.158 Sum_probs=77.4
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCC---EEEEEc----CC----CC-C---CCCc-----c------cccChhhh
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGF---IISYNS----RR----KR-P---SVLF-----P------YCANVYDL 127 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~---~V~~~~----~~----~~-~---~~~~-----~------~~~~l~el 127 (223)
+.+++++++.|+|.|..|+++++.|...|. +|+++| |+ .. . .... . ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 345789999999999999999999999998 699888 76 22 1 1110 0 13467888
Q ss_pred hcCCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 035615 128 AVNSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGD 184 (223)
Q Consensus 128 ~~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~ 184 (223)
++.+|+|+.+.|.. .+++.++.++.|+++.++++++.-. .+.-+.+|.+.|.
T Consensus 261 l~~aDVlInaT~~~---~G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPG---PGVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCC---SSSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCc---cCCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 99999999998742 1556667788899999999995433 4444555555554
No 198
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.84 E-value=5.2e-05 Score=57.70 Aligned_cols=87 Identities=3% Similarity=-0.099 Sum_probs=57.2
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCC---------CCCcc-------cccChhhh-hcCCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRP---------SVLFP-------YCANVYDL-AVNSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~---------~~~~~-------~~~~l~el-~~~aDiv~~~~p~t 141 (223)
.+++.|+|+|.+|+.+++.|...|++|.++++++.. ..+.. ....+.+. +..+|.|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 567999999999999999999999999999886410 11111 11234444 78999999999855
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
+.+..+ ....+.+.+...+|...+
T Consensus 83 ~~n~~~--~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 83 ADNAFV--VLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp HHHHHH--HHHHHHHTSSSCEEEECS
T ss_pred HHHHHH--HHHHHHHCCCCEEEEEEC
Confidence 433322 344555544444554333
No 199
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.83 E-value=1.9e-05 Score=67.92 Aligned_cols=107 Identities=22% Similarity=0.323 Sum_probs=66.7
Q ss_pred CEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCCC--------------cc-cccChhhhhcCCcEEEEeccCCh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSVL--------------FP-YCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~--------------~~-~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
++|+|||.|.||..++..|...|. +|..+|++++.... .. ...+ .+.++.||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 479999999999999999988888 99999987542211 00 1123 356789999999998533
Q ss_pred h---hh--------hccCHHH---HhcCCCCcEEEEcCCCcccCHHHHHHHH--HcCCceEE
Q 035615 143 Q---TH--------HIINKDV---MAELGKGGMIINVGRGALIDEKEMLQFL--VQGDINGV 188 (223)
Q Consensus 143 ~---t~--------~li~~~~---l~~mk~ga~lIN~arg~~vd~~al~~aL--~~~~i~~a 188 (223)
. ++ .++ .+. +....|++++|+++.+.-+....+.+.. ...++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVM-KEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp CSSCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 1 01 111 222 2222578899988665433333333332 34455544
No 200
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.83 E-value=1.8e-05 Score=67.52 Aligned_cols=102 Identities=7% Similarity=0.149 Sum_probs=66.2
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEE-EEEcCCCCCCC----CcccccChhhhhc--CCcEEEEeccCChhhhhccCHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFII-SYNSRRKRPSV----LFPYCANVYDLAV--NSDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~~----~~~~~~~l~el~~--~aDiv~~~~p~t~~t~~li~~~ 151 (223)
.+|||||+|.||+.+++.+... ++++ .++|+++.... ....+.+++++++ ++|+|++++|.......
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~----- 85 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAEI----- 85 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHHH-----
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHHH-----
Confidence 5899999999999999999876 6775 47887754322 1234678899985 79999999984422221
Q ss_pred HHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCce
Q 035615 152 VMAELGKGG-MIINV-GRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 152 ~l~~mk~ga-~lIN~-arg~~vd~~al~~aL~~~~i~ 186 (223)
....++.|. +++.- .--.+-+.+.|.++.++.++.
T Consensus 86 ~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 86 TLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp HHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 222345554 45542 222334456677777665543
No 201
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.83 E-value=1.8e-05 Score=67.55 Aligned_cols=102 Identities=18% Similarity=0.258 Sum_probs=65.0
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccccc---------cC-hhhhhcCCcEEEEeccCChh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYC---------AN-VYDLAVNSDVLVVCCALTEQ 143 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~---------~~-l~el~~~aDiv~~~~p~t~~ 143 (223)
.++|+|||.|.||..++..|. .|.+|.+++|+....+ +.... .+ -++....+|+|++++|.. +
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~ 79 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-Q 79 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-G
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-H
Confidence 368999999999999999999 8999999998764211 11100 00 134567899999999843 3
Q ss_pred hhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 144 THHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 144 t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
+...+ +.++.+.+++ +|.+.-|=-. ++.+.+.+...++.
T Consensus 80 ~~~~l--~~l~~~~~~~-ivs~~nGi~~-~e~l~~~~~~~~vl 118 (307)
T 3ego_A 80 LQSVF--SSLERIGKTN-ILFLQNGMGH-IHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHHH--HHTTSSCCCE-EEECCSSSHH-HHHHHTCCCSCEEE
T ss_pred HHHHH--HHhhcCCCCe-EEEecCCccH-HHHHHHhCCCCcEE
Confidence 44443 2333445566 8888776432 23444444444443
No 202
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.82 E-value=8.2e-06 Score=69.06 Aligned_cols=104 Identities=11% Similarity=0.066 Sum_probs=71.5
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcc---------------cccChhhhhcCCcEEEEeccC
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFP---------------YCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~---------------~~~~l~el~~~aDiv~~~~p~ 140 (223)
++.++++.|+|.|.||+++++.|...| +|++++|+.++..... ...++.+.+..+|+|+.++|.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 578999999999999999999999999 9999998764321110 112234567889999999985
Q ss_pred Chhh--hh-cc-CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 035615 141 TEQT--HH-II-NKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDI 185 (223)
Q Consensus 141 t~~t--~~-li-~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i 185 (223)
.... .. .+ + .+.++++.+++|+.-... .. .|.+..++...
T Consensus 204 ~~~~~~~~~~~~~---~~~l~~~~~v~Dv~y~p~-~t-~ll~~a~~~G~ 247 (287)
T 1nvt_A 204 GMYPNIDVEPIVK---AEKLREDMVVMDLIYNPL-ET-VLLKEAKKVNA 247 (287)
T ss_dssp TCTTCCSSCCSSC---STTCCSSSEEEECCCSSS-SC-HHHHHHHTTTC
T ss_pred CCCCCCCCCCCCC---HHHcCCCCEEEEeeeCCc-cC-HHHHHHHHCCC
Confidence 4321 10 12 2 346789999999987543 23 35555555444
No 203
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.82 E-value=4.2e-05 Score=66.15 Aligned_cols=90 Identities=11% Similarity=0.006 Sum_probs=62.4
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCC-----------------cccccChhhhhcCCcEEEEec--
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVL-----------------FPYCANVYDLAVNSDVLVVCC-- 138 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~el~~~aDiv~~~~-- 138 (223)
.++|+|||.|.+|..+|..|...|+ +|..||++++..+. .....++++.++.||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 4689999999999999999988887 89999988653211 111367777899999999998
Q ss_pred cCChhh------hhc-c------CH---HHHhcCCCCcEEEEcCCC
Q 035615 139 ALTEQT------HHI-I------NK---DVMAELGKGGMIINVGRG 168 (223)
Q Consensus 139 p~t~~t------~~l-i------~~---~~l~~mk~ga~lIN~arg 168 (223)
|..+.. +.- + -+ +.+....|.+++|+++.-
T Consensus 89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP 134 (331)
T 1pzg_A 89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNP 134 (331)
T ss_dssp SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCc
Confidence 644321 111 0 01 123334588999988653
No 204
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.81 E-value=7.4e-05 Score=64.19 Aligned_cols=100 Identities=18% Similarity=0.176 Sum_probs=66.0
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEE-EEEcCCCCCCC--CcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFII-SYNSRRKRPSV--LFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE 155 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~~--~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~ 155 (223)
.+|||||+|+||+.+++.+... ++++ .++|+++.... +...+.++++++.++|+|++++|..... +.....
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~~~a 78 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQAPK 78 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhcCCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHHHHH
Confidence 4799999999999999998876 6775 46777644321 2223567888888899999999854222 223345
Q ss_pred CCCCcEEEEcCCCccc--CH-HHHHHHHHcCC
Q 035615 156 LGKGGMIINVGRGALI--DE-KEMLQFLVQGD 184 (223)
Q Consensus 156 mk~ga~lIN~arg~~v--d~-~al~~aL~~~~ 184 (223)
++.|.-+|...-..+- +. +.|.++.+++.
T Consensus 79 l~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 79 FAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 6667766665544332 22 45666666554
No 205
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.81 E-value=3.5e-05 Score=66.73 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=50.9
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------CcccccChhhhh--cCCcEEEEeccCChh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LFPYCANVYDLA--VNSDVLVVCCALTEQ 143 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~~~~~~l~el~--~~aDiv~~~~p~t~~ 143 (223)
.+|||||+|.||+..++.++.. ++++. ++|+++.... +...+.++++++ .+.|+|++++|....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h 79 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKH 79 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHH
Confidence 5899999999999999999887 78865 7788765432 334478999999 569999999996543
No 206
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.80 E-value=2.4e-05 Score=67.80 Aligned_cols=63 Identities=11% Similarity=0.114 Sum_probs=50.8
Q ss_pred CCEEEEEecChHHHHHHHHHHhC--CCEEE-EEcCCCCCCC------CcccccChhhhhc--CCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF--GFIIS-YNSRRKRPSV------LFPYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~--G~~V~-~~~~~~~~~~------~~~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
-.+|||||+|.||+..++.++.. +++++ ++|+++.... +...+.+++++++ +.|+|++++|..
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSG 86 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcH
Confidence 46899999999999999999877 78865 7888765432 3445789999987 899999999854
No 207
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.79 E-value=3.3e-05 Score=66.12 Aligned_cols=62 Identities=10% Similarity=0.202 Sum_probs=48.0
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------Cc-ccccChhhhh-cCCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LF-PYCANVYDLA-VNSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~-~~~~~l~el~-~~aDiv~~~~p~t 141 (223)
.+|||||+|.||+.+++.+... ++++. ++++++.... +. ..+.++++++ .+.|+|++++|..
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~ 73 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNS 73 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGG
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChH
Confidence 4799999999999999999876 57754 7787764321 22 3467899999 7899999999844
No 208
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.79 E-value=8.1e-05 Score=63.86 Aligned_cols=63 Identities=13% Similarity=0.169 Sum_probs=49.1
Q ss_pred CCEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
-.+|||||+|.||+..++.++.. ++++. ++|+++.... +. ..+.++++++. +.|+|++++|..
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQ 78 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGG
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcH
Confidence 36899999999999999988765 56654 6788776543 22 24678999998 799999999854
No 209
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.78 E-value=9e-05 Score=62.86 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=70.1
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCCEEE-EEcCCCC--CCCCcccccChhhhhc--CCcEEEEeccCChhhhhccCHHH
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGFIIS-YNSRRKR--PSVLFPYCANVYDLAV--NSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~-~~~~~~~--~~~~~~~~~~l~el~~--~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
..+|+|+|+ |++|+..++.++..|++++ .+++... ...+...+.+++|+.. ..|++++++|.. ....++ .+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~-~~~~~~-~ea 84 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAP-FCKDSI-LEA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGG-GHHHHH-HHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHH-HHHHHH-HHH
Confidence 568999999 9999999999998899854 5666532 2224445788999988 899999999843 333333 233
Q ss_pred HhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCce
Q 035615 153 MAELGKGGMIINVGRGA-LIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~-~vd~~al~~aL~~~~i~ 186 (223)
++. .. ..+|..+-|- .-+.+.|.++.++..+.
T Consensus 85 ~~~-Gi-~~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 85 IDA-GI-KLIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp HHT-TC-SEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 332 22 2345555553 23455888888876664
No 210
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.78 E-value=2.7e-05 Score=66.67 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=47.2
Q ss_pred CEEEEEecChHHHHH-HHHHHhCCCEEE-EEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSEV-LNRLQAFGFIIS-YNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~-a~~l~~~G~~V~-~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
.+|||||+|.||+.+ ++.+...+++++ ++|+++.... +. ..+.+++++++ +.|+|++++|..
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~ 73 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNE 73 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGG
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChh
Confidence 379999999999998 777766788865 6788764321 22 24678999987 499999999843
No 211
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.75 E-value=7.3e-05 Score=63.77 Aligned_cols=101 Identities=22% Similarity=0.239 Sum_probs=61.1
Q ss_pred CCEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC--Cc--ccccChhhhhcCCcEEEEeccCChhhhhccCHHH
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV--LF--PYCANVYDLAVNSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~--~~--~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
-.+|||||+|+||+.+++.++.. ++++. ++|+++.... +. ..+.++.+. .++|+|++|+|..... +..
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h~-----~~~ 82 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQL-ESVDVALVCSPSREVE-----RTA 82 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGS-SSCCEEEECSCHHHHH-----HHH
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhC-CCCCEEEECCCchhhH-----HHH
Confidence 35899999999999999999864 67876 6888765432 11 124455555 7899999999833221 222
Q ss_pred HhcCCCCcEEEEcCC--C-cccCHHHHHHHHHcCCc
Q 035615 153 MAELGKGGMIINVGR--G-ALIDEKEMLQFLVQGDI 185 (223)
Q Consensus 153 l~~mk~ga~lIN~ar--g-~~vd~~al~~aL~~~~i 185 (223)
...++.|.-++...- + ...+...|.++.++..+
T Consensus 83 ~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~ 118 (304)
T 3bio_A 83 LEILKKGICTADSFDIHDGILALRRSLGDAAGKSGA 118 (304)
T ss_dssp HHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCC
Confidence 334566766776532 2 22334566666666443
No 212
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.74 E-value=4e-05 Score=65.88 Aligned_cols=64 Identities=14% Similarity=0.122 Sum_probs=50.3
Q ss_pred CCEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccCCh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCALTE 142 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~t~ 142 (223)
-.+|||||+|.||+..++.++.. ++++. ++|+++.... +. ..+.++++++. +.|+|++++|...
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 79 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQG 79 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGG
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHH
Confidence 46899999999999999999875 67765 6788765422 22 34678999997 7999999999553
No 213
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.72 E-value=6.6e-05 Score=64.23 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=46.5
Q ss_pred CEEEEEecChHHHHHHHHHHh--CCCEEEEEcCCCCCCCC-----------------cccccChhhhhcCCcEEEEeccC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQA--FGFIISYNSRRKRPSVL-----------------FPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~--~G~~V~~~~~~~~~~~~-----------------~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
++|+|||.|.+|..+|..|.. +|.+|..+|++++..++ .....+.++ ++.||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999986 58899999998653210 011245666 8999999999974
No 214
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.71 E-value=3e-05 Score=62.55 Aligned_cols=84 Identities=11% Similarity=0.033 Sum_probs=55.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------Ccc-------cccChhhh-hcCCcEEEEeccCChhhh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFP-------YCANVYDL-AVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~-------~~~~l~el-~~~aDiv~~~~p~t~~t~ 145 (223)
++|.|+|+|.+|+.+|+.|...|.+|.+++++++... +.. ....+++. +.++|+|++++|....+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 80 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNL 80 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHH
Confidence 4699999999999999999999999999998765321 111 11223443 678999999998554332
Q ss_pred hccCHHHHhcCCCCcEEEEc
Q 035615 146 HIINKDVMAELGKGGMIINV 165 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~ 165 (223)
.+ ....+.+.+...+|-.
T Consensus 81 ~~--~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 81 FI--AQLVMKDFGVKRVVSL 98 (218)
T ss_dssp HH--HHHHHHTSCCCEEEEC
T ss_pred HH--HHHHHHHcCCCeEEEE
Confidence 22 3333433344444433
No 215
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.70 E-value=3.9e-05 Score=65.53 Aligned_cols=108 Identities=13% Similarity=0.152 Sum_probs=67.3
Q ss_pred CEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC--------C------cc-cccChhhhhcCCcEEEEeccCCh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV--------L------FP-YCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------~------~~-~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
++|+|||.|.+|..+|..+...|. +|..+|++..... . .. ...+ .+.++.||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 489999999999999999998898 9999998754211 0 00 1123 356889999999995322
Q ss_pred h-----------hhhccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEE
Q 035615 143 Q-----------THHIIN--KDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGV 188 (223)
Q Consensus 143 ~-----------t~~li~--~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a 188 (223)
. +..++. .+.+....|++++|+++.+.-+....+.+.....++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1 111110 122333468899999876554444445555544555544
No 216
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.68 E-value=0.0001 Score=63.28 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=70.7
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCC---CC----------Cc----ccccCh---hhhhcCCc
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRP---SV----------LF----PYCANV---YDLAVNSD 132 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~---~~----------~~----~~~~~l---~el~~~aD 132 (223)
+.+++|+++.|+|.|.+|++++..|...|+ +|.+++|+.+. .+ +. ....++ .+.+.++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 345789999999999999999999999999 79999998432 11 00 012233 45678899
Q ss_pred EEEEeccCCh--hhhhcc--CHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 133 VLVVCCALTE--QTHHII--NKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 133 iv~~~~p~t~--~t~~li--~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
+|+.++|..- .....+ +. ..++++.+++++.-.+. ...-|.+|-+.|
T Consensus 223 iIINaTp~Gm~~~~~~~~~~~~---~~l~~~~~v~D~vY~P~-~T~ll~~A~~~G 273 (312)
T 3t4e_A 223 ILTNGTKVGMKPLENESLIGDV---SLLRPELLVTECVYNPH-MTKLLQQAQQAG 273 (312)
T ss_dssp EEEECSSTTSTTSTTCCSCCCG---GGSCTTCEEEECCCSSS-SCHHHHHHHHTT
T ss_pred EEEECCcCCCCCCCCCcccCCH---HHcCCCCEEEEeccCCC-CCHHHHHHHHCC
Confidence 9999998642 111111 32 34678899999876653 333333444443
No 217
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.68 E-value=5.3e-05 Score=65.18 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=64.8
Q ss_pred CCEEEEEecChHHHHHHHHHH-h-CCCEE-EEEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccCChhhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQ-A-FGFII-SYNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCALTEQTHH 146 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~-~-~G~~V-~~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~t~~t~~ 146 (223)
-.+|||||+|.||+..++.++ . -++++ .++|+++.... +. ..+.+++++++ +.|+|++++|.......
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 87 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEM 87 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHHH
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHHH
Confidence 358999999999999999987 5 47775 56788764321 23 34678999986 69999999984432221
Q ss_pred ccCHHHHhcCCCCcE-EEEc-CCCcccCHHHHHHHHHcC-Cce
Q 035615 147 IINKDVMAELGKGGM-IINV-GRGALIDEKEMLQFLVQG-DIN 186 (223)
Q Consensus 147 li~~~~l~~mk~ga~-lIN~-arg~~vd~~al~~aL~~~-~i~ 186 (223)
..+.++.|.. ++.- .-...-+.+.|.++.++. ++.
T Consensus 88 -----~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 88 -----TIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp -----HHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred -----HHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 2233455553 3321 111223344567776666 554
No 218
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.67 E-value=9.2e-05 Score=63.91 Aligned_cols=88 Identities=15% Similarity=0.155 Sum_probs=59.8
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCC-----------------cccccChhhhhcCCcEEEEec--
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVL-----------------FPYCANVYDLAVNSDVLVVCC-- 138 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~el~~~aDiv~~~~-- 138 (223)
.++|+|||.|.||..+|..+...|+ +|..+|++.+..++ .....++ +.++.||+|++++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~ 92 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGV 92 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCC
Confidence 3699999999999999999998898 99999998654221 1112456 6789999999998
Q ss_pred cCChh---------hhhccC--HHHHhcCCCCcEEEEcCC
Q 035615 139 ALTEQ---------THHIIN--KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 139 p~t~~---------t~~li~--~~~l~~mk~ga~lIN~ar 167 (223)
|..+. +..++. .+.+....|++++|+++.
T Consensus 93 p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 93 PRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp CCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 43221 111110 112223347899998765
No 219
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.67 E-value=4.3e-05 Score=66.31 Aligned_cols=65 Identities=18% Similarity=0.080 Sum_probs=49.7
Q ss_pred cCCCEEEEEecChHHH-HHHHHHHhC-CCEEE-EEcCCCCCCC------CcccccChhhhhc--CCcEEEEeccCC
Q 035615 77 LGGMQVGIVRLGNIGS-EVLNRLQAF-GFIIS-YNSRRKRPSV------LFPYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~-~~a~~l~~~-G~~V~-~~~~~~~~~~------~~~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
.+-.+|||||+|.||+ .+++.++.. ++++. ++|+++.... +...+.+++++++ +.|+|++++|..
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~ 100 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAV 100 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGG
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcH
Confidence 3456899999999999 788888877 78865 6788764332 3344689999986 589999999854
No 220
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.67 E-value=6.1e-05 Score=64.40 Aligned_cols=102 Identities=12% Similarity=0.195 Sum_probs=62.5
Q ss_pred CEEEEEecChHHH-HHHHHHHhC-CCEEEEEcCCCCCCC------Cccc-ccChhhhh-cCCcEEEEeccCChhhhhccC
Q 035615 80 MQVGIVRLGNIGS-EVLNRLQAF-GFIISYNSRRKRPSV------LFPY-CANVYDLA-VNSDVLVVCCALTEQTHHIIN 149 (223)
Q Consensus 80 ~~vgIiG~G~iG~-~~a~~l~~~-G~~V~~~~~~~~~~~------~~~~-~~~l~el~-~~aDiv~~~~p~t~~t~~li~ 149 (223)
.+|||||+|.||+ .+++.++.. ++++.++|+++.... +... +.+..+++ .+.|+|++++|...... +
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~-~-- 79 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHST-L-- 79 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHH-H--
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHH-H--
Confidence 4799999999998 488888765 778778888765322 2222 33444555 78999999998432211 1
Q ss_pred HHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCce
Q 035615 150 KDVMAELGKGG-MIINV-GRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 150 ~~~l~~mk~ga-~lIN~-arg~~vd~~al~~aL~~~~i~ 186 (223)
..+.++.|. +++.- .--.+-+.+.|.++.++.++.
T Consensus 80 --~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 80 --AAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp --HHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 112334453 55542 122333455677777766654
No 221
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.66 E-value=8.7e-05 Score=64.01 Aligned_cols=62 Identities=21% Similarity=0.356 Sum_probs=49.2
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
.+|||||+|.||+..++.+... ++++. ++|+++.... +. ..+.+++++++ +.|+|++++|..
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 75 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTN 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCc
Confidence 4899999999999999999875 67765 6788765432 22 24689999998 799999999854
No 222
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.64 E-value=1.9e-05 Score=65.61 Aligned_cols=94 Identities=17% Similarity=0.127 Sum_probs=63.2
Q ss_pred HHHHHHcCCCCCCCCCCCccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCC-------------------C
Q 035615 56 GNWYVRAGLWAKTGDYPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRP-------------------S 115 (223)
Q Consensus 56 ~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~-------------------~ 115 (223)
|.++++-..|... ....|++++|.|||.|.+|..+++.|...|. ++.++|+..-. .
T Consensus 12 y~Rq~~l~~~g~~----~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka 87 (249)
T 1jw9_B 12 YNRQIILRGFDFD----GQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKV 87 (249)
T ss_dssp THHHHTSTTTHHH----HHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHH
T ss_pred hhheecccccCHH----HHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHH
Confidence 3444444456532 1245899999999999999999999999998 78888877511 0
Q ss_pred C-----------Ccc--c----c--cChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 116 V-----------LFP--Y----C--ANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 116 ~-----------~~~--~----~--~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
+ ... . . .+++++++++|+|+.+++ +.+++.++++...+
T Consensus 88 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 88 ESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFA 144 (249)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHH
Confidence 0 000 0 0 134567788999988885 56777777665544
No 223
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.63 E-value=0.00022 Score=60.44 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=70.7
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCCEEE-EEcCCC--CCCCCcccccChhhhhc--CCcEEEEeccCChhhhhccCHHH
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGFIIS-YNSRRK--RPSVLFPYCANVYDLAV--NSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~-~~~~~~--~~~~~~~~~~~l~el~~--~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
.++|+|+|. |++|+.+++.++..|++++ .+++.. ....+...+.+++|+.+ ..|++++++|. +.+...+. +.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~~-ea 84 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAAL-EA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHHH-HH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHHH-HH
Confidence 578999998 9999999999998899854 566654 22234555778999988 89999999983 33344432 23
Q ss_pred HhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCce
Q 035615 153 MAELGKGGMIINVGRGA-LIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 153 l~~mk~ga~lIN~arg~-~vd~~al~~aL~~~~i~ 186 (223)
.+ .+-. .+|..+.|= ..+++.+.++.++..+.
T Consensus 85 ~~-~Gi~-~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 85 AH-AGIP-LIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp HH-TTCS-EEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 32 1222 255555552 23456888888876664
No 224
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.63 E-value=0.00011 Score=54.47 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=73.2
Q ss_pred CEEEEEec----ChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc
Q 035615 80 MQVGIVRL----GNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE 155 (223)
Q Consensus 80 ~~vgIiG~----G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~ 155 (223)
++|+|||. ++.|..+.+.|+..|++|+-+++......+...+.++.++-. -|++++++| .+.+..++. +.. .
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~-vDlavi~~p-~~~v~~~v~-e~~-~ 80 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEG-VDTVTLYIN-PQNQLSEYN-YIL-S 80 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTT-CCEEEECSC-HHHHGGGHH-HHH-H
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCC-CCEEEEEeC-HHHHHHHHH-HHH-h
Confidence 67999996 679999999999999999999988766666666788888887 999999998 334555553 333 2
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 156 LGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 156 mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
+...+++++. |- .++.+.+..++..++
T Consensus 81 ~g~k~v~~~~--G~--~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 81 LKPKRVIFNP--GT--ENEELEEILSENGIE 107 (122)
T ss_dssp HCCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred cCCCEEEECC--CC--ChHHHHHHHHHcCCe
Confidence 3444666554 32 356777777777776
No 225
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.61 E-value=0.0001 Score=64.62 Aligned_cols=62 Identities=23% Similarity=0.280 Sum_probs=47.4
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-C---cc---ccc---ChhhhhcCCcEEEEe
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-L---FP---YCA---NVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~---~~---~~~---~l~el~~~aDiv~~~ 137 (223)
-+.|+||+|+|.|.+|+.+++.++.+|++|+++|+.+.... . .. .+. .+.++++++|+|+..
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 47899999999999999999999999999999987654321 1 00 122 366788899998553
No 226
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.61 E-value=0.00015 Score=62.49 Aligned_cols=59 Identities=15% Similarity=0.093 Sum_probs=46.5
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC---------------C--cccccChhhhhcCCcEEEEec
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV---------------L--FPYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---------------~--~~~~~~l~el~~~aDiv~~~~ 138 (223)
.++|+|||.|.+|..+|..+...|+ +|..+|++.+..+ . .....+. +.++.||+|++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 3689999999999999999998888 8999998765321 0 1112456 7789999999998
No 227
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.59 E-value=0.0002 Score=61.39 Aligned_cols=63 Identities=11% Similarity=0.158 Sum_probs=49.0
Q ss_pred CCEEEEEecChHHH-HHHHHHHhCCCEE-EEEcCCCCCCC-------CcccccChhhhhc--CCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGS-EVLNRLQAFGFII-SYNSRRKRPSV-------LFPYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~-~~a~~l~~~G~~V-~~~~~~~~~~~-------~~~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
-.+|||||+|.+|. .+++.++..++++ .++|+++.... ....+.+++++++ +.|+|++++|..
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 77 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPC 77 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGG
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChh
Confidence 35899999999996 6777777678986 57888876542 2344688999986 689999999854
No 228
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.56 E-value=9.7e-05 Score=62.93 Aligned_cols=93 Identities=10% Similarity=0.149 Sum_probs=59.4
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC--------Cc------c-cccChhhhhcCCcEEEEeccC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV--------LF------P-YCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------~~------~-~~~~l~el~~~aDiv~~~~p~ 140 (223)
..++|+|||.|.||..++..|...|. +|..+|++..... .. . ...+-.+.++.+|+|+++++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGP 85 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCC
Confidence 34789999999999999999998898 9999998753211 00 0 011123567899999999953
Q ss_pred Chh---hh--------hccC--HHHHhcCCCCcEEEEcCCCcc
Q 035615 141 TEQ---TH--------HIIN--KDVMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 141 t~~---t~--------~li~--~~~l~~mk~ga~lIN~arg~~ 170 (223)
... ++ .++. .+.+....+++++|+++.|--
T Consensus 86 ~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 86 RQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 211 00 1110 112222367899999876643
No 229
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.56 E-value=4.6e-05 Score=67.89 Aligned_cols=84 Identities=17% Similarity=0.106 Sum_probs=58.0
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccc-------cccChhhh-hcCCcEEEEeccCChhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFP-------YCANVYDL-AVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~-------~~~~l~el-~~~aDiv~~~~p~t~~t~ 145 (223)
+.+|.|+|+|++|+.+++.|+..|.+|+++|+++.... +.. ....|.++ +.++|+|+++++....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 45699999999999999999999999999998865321 111 11223343 678999999998654443
Q ss_pred hccCHHHHhcCCCCcEEEE
Q 035615 146 HIINKDVMAELGKGGMIIN 164 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN 164 (223)
.+ ....+.+.+...+|-
T Consensus 84 ~i--~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 84 QL--TEMVKEHFPHLQIIA 100 (413)
T ss_dssp HH--HHHHHHHCTTCEEEE
T ss_pred HH--HHHHHHhCCCCeEEE
Confidence 33 345555666644444
No 230
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.54 E-value=6.6e-05 Score=65.46 Aligned_cols=63 Identities=14% Similarity=0.111 Sum_probs=47.0
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----------CcccccChhhhhcCCcEEEEeccCC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----------LFPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----------~~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
+.++|+|+|.|.+|+.+++.|.. ..+|.+.+++.+..+ ++....++.++++++|+|+.++|..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 35689999999999999999976 478888887653221 1122345778899999999999843
No 231
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.54 E-value=0.00025 Score=59.59 Aligned_cols=102 Identities=12% Similarity=0.222 Sum_probs=68.5
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCChhh----hh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALTEQT----HH 146 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t~~t----~~ 146 (223)
.++++.|+|.|.+|++++..|...|+ +|.+++|+.++.. +.....++. +.++|+|+.++|..-.. ..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 47899999999999999999999998 6999999865422 111111222 46899999999965321 11
Q ss_pred -ccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 147 -IINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 147 -li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.+..+. ++++.+++|+.-.+. +. .|.+..++....
T Consensus 196 ~~~~~~~---l~~~~~v~DlvY~P~-~T-~ll~~A~~~G~~ 231 (271)
T 1npy_A 196 LAFPKAF---IDNASVAFDVVAMPV-ET-PFIRYAQARGKQ 231 (271)
T ss_dssp CSSCHHH---HHHCSEEEECCCSSS-SC-HHHHHHHHTTCE
T ss_pred CCCCHHH---cCCCCEEEEeecCCC-CC-HHHHHHHHCCCE
Confidence 134333 456889999987553 33 555555554444
No 232
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.53 E-value=0.00016 Score=62.93 Aligned_cols=62 Identities=13% Similarity=0.226 Sum_probs=47.8
Q ss_pred CEEEEEecChHHHH-HHHHHHhC-CCEEE-EEcCCCCCCC----CcccccChhhhhc--CCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSE-VLNRLQAF-GFIIS-YNSRRKRPSV----LFPYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~~----~~~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
.+|||||+|.||+. .++.++.. ++++. ++|++++... +...+.+++++++ +.|+|++++|..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNA 78 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGG
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChH
Confidence 58999999999997 67777765 77865 6787764321 3345789999998 789999999854
No 233
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.52 E-value=0.00029 Score=60.21 Aligned_cols=107 Identities=12% Similarity=0.118 Sum_probs=74.1
Q ss_pred ccCCCEEEEE-ec-ChHHHHHHHHHHhCCCEEE-EEcCCCC--CCCCcccccChhhhhc--CCcEEEEeccCChhhhhcc
Q 035615 76 KLGGMQVGIV-RL-GNIGSEVLNRLQAFGFIIS-YNSRRKR--PSVLFPYCANVYDLAV--NSDVLVVCCALTEQTHHII 148 (223)
Q Consensus 76 ~l~g~~vgIi-G~-G~iG~~~a~~l~~~G~~V~-~~~~~~~--~~~~~~~~~~l~el~~--~aDiv~~~~p~t~~t~~li 148 (223)
-+..+++.|| |+ |++|+.+++.++..|++++ .+++... ...+...+.+++|+.+ ..|++++++|.. .....+
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~~-~~~~~~ 88 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPP-FAAAAI 88 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCHH-HHHHHH
Confidence 3567889999 98 9999999999999999954 5666532 2235555778999988 899999999832 333343
Q ss_pred CHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcC-Cce
Q 035615 149 NKDVMAELGKGGMIINVGRGAL-IDEKEMLQFLVQG-DIN 186 (223)
Q Consensus 149 ~~~~l~~mk~ga~lIN~arg~~-vd~~al~~aL~~~-~i~ 186 (223)
. +..+ ..- ..+|+.+-|-. -|+..+.+..++. .+.
T Consensus 89 ~-e~i~-~Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 89 N-EAID-AEV-PLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp H-HHHH-TTC-SEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred H-HHHH-CCC-CEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 2 2332 122 24567777743 3445788888887 665
No 234
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.51 E-value=0.00078 Score=57.67 Aligned_cols=99 Identities=10% Similarity=0.203 Sum_probs=72.5
Q ss_pred ccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCC-C---------CcccccChhhhhcCCcEEEEec----cC
Q 035615 76 KLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPS-V---------LFPYCANVYDLAVNSDVLVVCC----AL 140 (223)
Q Consensus 76 ~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-~---------~~~~~~~l~el~~~aDiv~~~~----p~ 140 (223)
.+.|+||+++| .+++.++.+..+..+|++|.+..|..-.. . .+....+++|.++.+|+|..-. ..
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~ 230 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGF 230 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC-----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcc
Confidence 37899999999 67899999999999999999887643211 1 1123578999999999998743 10
Q ss_pred ---Ch-----hhhhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 141 ---TE-----QTHHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 141 ---t~-----~t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
.+ ....-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 231 e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 275 (309)
T 4f2g_A 231 EAENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGEEVTAG 275 (309)
T ss_dssp -------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTTTBCHH
T ss_pred hhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCceecHH
Confidence 00 123567999999999999999887 56555443
No 235
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.47 E-value=9.2e-05 Score=60.60 Aligned_cols=90 Identities=18% Similarity=0.192 Sum_probs=59.7
Q ss_pred CCCccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-------Cccc-ccC-hhhhhcCCcEEEEeccCC
Q 035615 71 YPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-------LFPY-CAN-VYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 71 ~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------~~~~-~~~-l~el~~~aDiv~~~~p~t 141 (223)
++...++.|++|.|||.|.+|..-++.|...|++|.++++...+.. .... ... .++.+..+|+|+.+.. .
T Consensus 23 ~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~-d 101 (223)
T 3dfz_A 23 YTVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN-D 101 (223)
T ss_dssp CEEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-C
T ss_pred cccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-C
Confidence 4566789999999999999999999999999999999988654210 1110 011 1345678998887654 3
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcC
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~a 166 (223)
++. |.......+ -.++||+.
T Consensus 102 ~~~----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 102 QAV----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp THH----HHHHHHHSC-TTCEEEC-
T ss_pred HHH----HHHHHHHHh-CCCEEEEe
Confidence 332 233333344 45677764
No 236
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.46 E-value=7.9e-05 Score=64.82 Aligned_cols=63 Identities=13% Similarity=0.070 Sum_probs=50.0
Q ss_pred CCEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCC-----CCcccccChhhhhc--CCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPS-----VLFPYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~-----~~~~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
..+|||||+|.||+..++.++.. ++++. ++|+++... .+...+.+++++++ +.|+|++++|..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcH
Confidence 46899999999999999999876 77865 678776432 23445789999997 789999999854
No 237
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.46 E-value=0.0002 Score=62.18 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=67.0
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEE-EEEcCCCCCCC------C----cccccChhhhhc--CCcEEEEeccCChhhh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFII-SYNSRRKRPSV------L----FPYCANVYDLAV--NSDVLVVCCALTEQTH 145 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~~------~----~~~~~~l~el~~--~aDiv~~~~p~t~~t~ 145 (223)
.+|||||+|.||+..++.+... ++++ .++|+++.... + ...+.+++++++ +.|+|++++|......
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 86 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVE 86 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 5899999999999999988875 6675 46787764321 2 234678999986 5999999998432211
Q ss_pred hccCHHHHhcCCCCcEEEEcC--CCcccCHHHHHHHHHcCCce
Q 035615 146 HIINKDVMAELGKGGMIINVG--RGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~a--rg~~vd~~al~~aL~~~~i~ 186 (223)
-....++.|.-++.-- --.+-+.+.|.++.++.++.
T Consensus 87 -----~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 87 -----WAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp -----HHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred -----HHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 1223456665444321 22333456788888777665
No 238
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.45 E-value=0.00013 Score=59.44 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=42.5
Q ss_pred CCEEEEEecChHHHHHHHH--HHhCCCEEE-EEcCCCCCCC----C--cccccChhhhhcCCcEEEEeccC
Q 035615 79 GMQVGIVRLGNIGSEVLNR--LQAFGFIIS-YNSRRKRPSV----L--FPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~--l~~~G~~V~-~~~~~~~~~~----~--~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
.++++|||.|++|+.+++. ....|+++. ++|.++.... + .....++++++++.|++++++|.
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 3579999999999999994 445688865 6777766543 1 11356788888777999999994
No 239
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=97.45 E-value=0.0011 Score=57.51 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=73.3
Q ss_pred cCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEecc
Q 035615 77 LGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 77 l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~~p 139 (223)
+.|+||++|| .+++.++.+..+..+|++|.+..|..-... + +....+++|.++.+|+|..-.=
T Consensus 177 l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 177 FKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVW 256 (340)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCc
Confidence 7899999999 578999999999999999998877543221 1 2235789999999999987542
Q ss_pred CC------hh-----hhhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 140 LT------EQ-----THHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 140 ~t------~~-----t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
.. ++ ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 257 ~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 305 (340)
T 4ep1_A 257 MSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGE 305 (340)
T ss_dssp ------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred cCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 11 01 12467999999999999999988 67555544
No 240
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.44 E-value=0.00018 Score=62.08 Aligned_cols=63 Identities=13% Similarity=0.303 Sum_probs=45.9
Q ss_pred CEEEEEecChHHHH-HHH-HHH-hCCCEEE-EEcCCCCCCC------CcccccChhhhhcC--CcEEEEeccCCh
Q 035615 80 MQVGIVRLGNIGSE-VLN-RLQ-AFGFIIS-YNSRRKRPSV------LFPYCANVYDLAVN--SDVLVVCCALTE 142 (223)
Q Consensus 80 ~~vgIiG~G~iG~~-~a~-~l~-~~G~~V~-~~~~~~~~~~------~~~~~~~l~el~~~--aDiv~~~~p~t~ 142 (223)
.+|||||+|.||+. .+. .+. .-++++. ++|+++.... +...+.+++++++. .|+|++++|...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADS 77 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGG
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHH
Confidence 57999999999996 455 333 3477865 7888765432 23346889999976 899999998543
No 241
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.44 E-value=0.00025 Score=59.59 Aligned_cols=109 Identities=13% Similarity=0.132 Sum_probs=75.8
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCC----------cccccChhhhhcCCcEEEEeccCCh
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVL----------FPYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~----------~~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
+.++.++++.|+|.|..+++++..|...|. +|.+++|+.++... ........+.++++|+|+.++|..-
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 346789999999999999999999999997 68899998754321 0111222334678999999998542
Q ss_pred --hhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 035615 143 --QTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQG 183 (223)
Q Consensus 143 --~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~ 183 (223)
...--++...++.++++.++.++--.+. .+.-|.+|-+.|
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~vY~P~-~T~ll~~A~~~G 241 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADVVTSPE-ITPLLNRARQVG 241 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEECCCSSS-SCHHHHHHHHHT
T ss_pred CCCCCCCCChHHHhccCCCcEEEEEccCCC-CCHHHHHHHHCc
Confidence 2222356777888999999999876553 334444444443
No 242
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.43 E-value=0.0013 Score=56.09 Aligned_cols=100 Identities=14% Similarity=0.156 Sum_probs=76.2
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCC-------cccccChhhhhcCCcEEEEeccC-------
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVL-------FPYCANVYDLAVNSDVLVVCCAL------- 140 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~-------~~~~~~l~el~~~aDiv~~~~p~------- 140 (223)
.+.|.+|+++|= +++.++.+..+..+|++|.+..|..-.... .....+++|.++.+|+|..-.=.
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 378999999995 899999999999999999988876533221 33467899999999999884420
Q ss_pred -Ch--h--hhhccCHHHHhcCCCCcEEEEcC---CCcccCHHH
Q 035615 141 -TE--Q--THHIINKDVMAELGKGGMIINVG---RGALIDEKE 175 (223)
Q Consensus 141 -t~--~--t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~a 175 (223)
.. + ...-++++.++.+|++++|.-+. ||.=|+.+-
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~eV 273 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEEA 273 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHH
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHHH
Confidence 01 1 13567999999999999999998 566555543
No 243
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=97.42 E-value=0.00062 Score=61.02 Aligned_cols=105 Identities=15% Similarity=0.139 Sum_probs=71.8
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCC------CCC---------------CCc---------ccccCh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRK------RPS---------------VLF---------PYCANV 124 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~------~~~---------------~~~---------~~~~~l 124 (223)
.+++|+||.|=|+|++|+.+|+.|...|.+|+..+.+. ... .+. ..+.+-
T Consensus 231 ~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~~ 310 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLEG 310 (450)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEET
T ss_pred CCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEecC
Confidence 35889999999999999999999999999987654221 000 000 001122
Q ss_pred hhhh-cCCcEEEEeccCChhhhhccCHHHHhcCCCC--cEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 125 YDLA-VNSDVLVVCCALTEQTHHIINKDVMAELGKG--GMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 125 ~el~-~~aDiv~~~~p~t~~t~~li~~~~l~~mk~g--a~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
++++ ..||+.+-|. +.+.|+.+..+.++.. .++++-+.+.+-.+ + .+.|.++.|.
T Consensus 311 ~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl 368 (450)
T 4fcc_A 311 QQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVL 368 (450)
T ss_dssp CCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCE
T ss_pred cccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCE
Confidence 2333 3799887765 5677998888888753 57888888886544 3 3667777775
No 244
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.41 E-value=0.00058 Score=58.61 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=64.6
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCCC-------c-------ccccChhhhhcCCcEEEEeccCCh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSVL-------F-------PYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~-------~-------~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
.++|+|||.|.+|..++..+...|. +|..+|...++.++ . ....+..+.++.||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4689999999999999999988887 89999987654321 0 001123566899999999987432
Q ss_pred hhhhc------------cC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHcCCceEE
Q 035615 143 QTHHI------------IN--KDVMAELGKGGMIINVGRGALIDEKEMLQF--LVQGDINGV 188 (223)
Q Consensus 143 ~t~~l------------i~--~~~l~~mk~ga~lIN~arg~~vd~~al~~a--L~~~~i~~a 188 (223)
..+. +. .+.+....|++++|+++.--=+....+.+. +...++.|.
T Consensus 87 -k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 87 -KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred -CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEecc
Confidence 1111 10 122333368999999743222233333333 334466655
No 245
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.41 E-value=0.00027 Score=57.29 Aligned_cols=92 Identities=15% Similarity=0.037 Sum_probs=61.8
Q ss_pred cCCCEEEEEe-cChHHHHHHHHHHhCC-CEEEEEcCCCCCCCC------------cccccChhhhhcCCcEEEEeccCCh
Q 035615 77 LGGMQVGIVR-LGNIGSEVLNRLQAFG-FIISYNSRRKRPSVL------------FPYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 77 l~g~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~~~------------~~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
...|+|.|.| .|.||+.+++.|...| ++|++++|++..... .....+++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 4468999999 6999999999999999 899999887654321 1112345678899999998876432
Q ss_pred hhhhccCHHHHhcCCC--CcEEEEcCCCcc
Q 035615 143 QTHHIINKDVMAELGK--GGMIINVGRGAL 170 (223)
Q Consensus 143 ~t~~li~~~~l~~mk~--ga~lIN~arg~~ 170 (223)
.... .+..+..|+. ...||++|....
T Consensus 101 ~~~~--~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LDIQ--ANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HHHH--HHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hhHH--HHHHHHHHHHcCCCEEEEEeccee
Confidence 2111 1234444432 247888887543
No 246
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.40 E-value=0.00023 Score=67.76 Aligned_cols=114 Identities=11% Similarity=0.083 Sum_probs=79.3
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------------C------cccccChhhhhcCCc
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV--------------------L------FPYCANVYDLAVNSD 132 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------------~------~~~~~~l~el~~~aD 132 (223)
=++|||||.|.||+.+|..+...|++|+.+|++++... . .....+..+.+++||
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD 395 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVD 395 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCS
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCC
Confidence 36999999999999999999999999999998764211 0 001222234478999
Q ss_pred EEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEEeeCCCC
Q 035615 133 VLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDINGVGLDVFEN 195 (223)
Q Consensus 133 iv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~lDV~~~ 195 (223)
+|+=++|.+-+.+.-+-++.=+.++++++|-....+ +....|.+.++. .-+..++--|.+
T Consensus 396 lVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~~-p~r~ig~HFfnP 455 (742)
T 3zwc_A 396 LVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDR-PQLVIGTHFFSP 455 (742)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEECCSS
T ss_pred EEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcCC-ccccccccccCC
Confidence 999999988777765556666778999988743333 445556666543 334456665543
No 247
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.38 E-value=0.00051 Score=54.86 Aligned_cols=88 Identities=15% Similarity=0.161 Sum_probs=60.1
Q ss_pred CCEEEEEe-cChHHHHHHHHHH-hCCCEEEEEcCCCC-CCC-------Cc-------ccccChhhhhcCCcEEEEeccCC
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQ-AFGFIISYNSRRKR-PSV-------LF-------PYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~-~~G~~V~~~~~~~~-~~~-------~~-------~~~~~l~el~~~aDiv~~~~p~t 141 (223)
.|+|.|.| .|.||+.+++.|. ..|++|++.+|++. ... .. ....+++++++.+|+|+.+....
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 36799999 5999999999999 89999999988765 221 11 11234567889999999888643
Q ss_pred hhhhhccCHHHHhcCCC-C-cEEEEcCCCcc
Q 035615 142 EQTHHIINKDVMAELGK-G-GMIINVGRGAL 170 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~-g-a~lIN~arg~~ 170 (223)
... ....++.|++ + ..||++|....
T Consensus 85 -n~~---~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 85 -GSD---MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp -HHH---HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred -Chh---HHHHHHHHHhcCCCeEEEEeecee
Confidence 111 3444455542 2 36888775443
No 248
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.37 E-value=0.00049 Score=59.46 Aligned_cols=64 Identities=14% Similarity=0.183 Sum_probs=48.7
Q ss_pred CCEEEEEecChHHHH-HHHHHHhC-CCEEE-EEcCCCCCC----CCcccccChhhhhcC--CcEEEEeccCCh
Q 035615 79 GMQVGIVRLGNIGSE-VLNRLQAF-GFIIS-YNSRRKRPS----VLFPYCANVYDLAVN--SDVLVVCCALTE 142 (223)
Q Consensus 79 g~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~----~~~~~~~~l~el~~~--aDiv~~~~p~t~ 142 (223)
-.+|||||+|.||+. .++.++.. ++++. ++|+++... .+...+.++++++.. .|+|++++|...
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 79 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDT 79 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTT
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 358999999999997 77777766 77865 678765432 133457899999975 899999998653
No 249
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.37 E-value=0.00039 Score=59.70 Aligned_cols=88 Identities=19% Similarity=0.265 Sum_probs=59.7
Q ss_pred CEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCCC---------------cccc-cChhhhhcCCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSVL---------------FPYC-ANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~---------------~~~~-~~l~el~~~aDiv~~~~p~t 141 (223)
++|+|||.|.||..+|..+...|. ++..+|+.+...++ .... .+..+.++.||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 589999999999999999987776 89999988754220 0111 34567899999999997533
Q ss_pred hh---hh-hcc--C-------HHHHhcCCCCcEEEEcCC
Q 035615 142 EQ---TH-HII--N-------KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 142 ~~---t~-~li--~-------~~~l~~mk~ga~lIN~ar 167 (223)
.. ++ .++ | .+.+....|.+++++++.
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 11 11 111 1 123444578899999984
No 250
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.37 E-value=0.00017 Score=64.97 Aligned_cols=101 Identities=7% Similarity=0.147 Sum_probs=67.7
Q ss_pred CCCEEEEEecChH--HHHHHHHHHh----CCCEEEEEcCCCCCCC--------------CcccccChhhhhcCCcEEEEe
Q 035615 78 GGMQVGIVRLGNI--GSEVLNRLQA----FGFIISYNSRRKRPSV--------------LFPYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 78 ~g~~vgIiG~G~i--G~~~a~~l~~----~G~~V~~~~~~~~~~~--------------~~~~~~~l~el~~~aDiv~~~ 137 (223)
+.++|+|||.|.+ |..+++.+.. .| +|..||+.+...+ ......++++.++.||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4579999999997 5788887754 46 9999998763311 122356889999999999999
Q ss_pred ccCC-----------hhhhhccCH------------------------HHHhcCCCCcEEEEcCCCcccCHHHHHHH
Q 035615 138 CALT-----------EQTHHIINK------------------------DVMAELGKGGMIINVGRGALIDEKEMLQF 179 (223)
Q Consensus 138 ~p~t-----------~~t~~li~~------------------------~~l~~mk~ga~lIN~arg~~vd~~al~~a 179 (223)
++.. |...++... +.+....|++++||++.---+-..++.+.
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~ 159 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKV 159 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHH
Confidence 9642 222333211 23344468999999987654444444443
No 251
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=97.36 E-value=0.00026 Score=61.90 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=46.5
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-C---------cccccChhhhhcCCcEEEE
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-L---------FPYCANVYDLAVNSDVLVV 136 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~---------~~~~~~l~el~~~aDiv~~ 136 (223)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|+.+.... . ......+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 46799999999999999999999999999999987654321 0 0011235667888998855
No 252
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.36 E-value=0.00019 Score=62.29 Aligned_cols=65 Identities=22% Similarity=0.263 Sum_probs=50.7
Q ss_pred CCCEEEEEecChHHHHHHHHHH-h-CCCEEE-EEcCCCCCCC------C--cccccChhhhhc--CCcEEEEeccCCh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQ-A-FGFIIS-YNSRRKRPSV------L--FPYCANVYDLAV--NSDVLVVCCALTE 142 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~-~-~G~~V~-~~~~~~~~~~------~--~~~~~~l~el~~--~aDiv~~~~p~t~ 142 (223)
...+|||||+|.||+..++.+. . -++++. ++|+++.... + ...+.+++++++ +.|+|++++|...
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 4568999999999999999988 4 377865 6888876432 2 345789999987 4899999998543
No 253
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.35 E-value=0.00015 Score=59.04 Aligned_cols=82 Identities=11% Similarity=0.011 Sum_probs=54.4
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----Cccc----c---cChhhh-hcCCcEEEEeccCChhhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPY----C---ANVYDL-AVNSDVLVVCCALTEQTHH 146 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~----~---~~l~el-~~~aDiv~~~~p~t~~t~~ 146 (223)
.+++.|+|+|.+|+.+++.|...|+ |++++++++... +... . ..++++ +.++|.|++++|....+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~- 86 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI- 86 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHH-
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHH-
Confidence 5689999999999999999999999 999998765321 1111 1 223334 789999999988543332
Q ss_pred ccCHHHHhcCCCCcEEE
Q 035615 147 IINKDVMAELGKGGMII 163 (223)
Q Consensus 147 li~~~~l~~mk~ga~lI 163 (223)
.-....+.+.+...+|
T Consensus 87 -~~~~~a~~~~~~~~ii 102 (234)
T 2aef_A 87 -HCILGIRKIDESVRII 102 (234)
T ss_dssp -HHHHHHHHHCSSSEEE
T ss_pred -HHHHHHHHHCCCCeEE
Confidence 2234455566663333
No 254
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.35 E-value=0.0022 Score=54.78 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=74.1
Q ss_pred ccCCCEEEEEecC--hHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEe
Q 035615 76 KLGGMQVGIVRLG--NIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~ 137 (223)
.+.|++|+++|=| ++.++.+..+..+|++|.+..|..-... + .....+++|.++.+|+|..-
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 3789999999975 9999999999999999998887543221 1 22367899999999999884
Q ss_pred ccC-------Ch-----hhhhccCHHHHhcCCCCcEEEEcCC---CcccCHH
Q 035615 138 CAL-------TE-----QTHHIINKDVMAELGKGGMIINVGR---GALIDEK 174 (223)
Q Consensus 138 ~p~-------t~-----~t~~li~~~~l~~mk~ga~lIN~ar---g~~vd~~ 174 (223)
.=. .+ ....-++++.++.+|++++|.-+.- |.=|+.+
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 276 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDA 276 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccCHh
Confidence 420 01 1235679999999999999999874 5544443
No 255
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.00014 Score=65.77 Aligned_cols=69 Identities=14% Similarity=0.114 Sum_probs=49.0
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHHhC-CCEEEEEcCCCCCCC------Ccc-------cccChhhhhcCCcEEEEec
Q 035615 73 LGFKLGGMQVGIVRLGNIGSEVLNRLQAF-GFIISYNSRRKRPSV------LFP-------YCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 73 ~~~~l~g~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~------~~~-------~~~~l~el~~~aDiv~~~~ 138 (223)
....+.+++|+|+|.|.+|+.+++.|... |++|.+++|+..+.. +.. ...++.++++.+|+|+.++
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t 96 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI 96 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence 44568899999999999999999999887 789999998754321 111 0124567788999999999
Q ss_pred cCC
Q 035615 139 ALT 141 (223)
Q Consensus 139 p~t 141 (223)
|..
T Consensus 97 p~~ 99 (467)
T 2axq_A 97 PYT 99 (467)
T ss_dssp CGG
T ss_pred chh
Confidence 854
No 256
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.35 E-value=0.00012 Score=63.23 Aligned_cols=63 Identities=21% Similarity=0.283 Sum_probs=49.2
Q ss_pred CEEEEEecChHHHHHHHHHH-h-CCCEEE-EEcCCCCCCC------C--cccccChhhhhcC--CcEEEEeccCCh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQ-A-FGFIIS-YNSRRKRPSV------L--FPYCANVYDLAVN--SDVLVVCCALTE 142 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~-~-~G~~V~-~~~~~~~~~~------~--~~~~~~l~el~~~--aDiv~~~~p~t~ 142 (223)
.+|||||+|.||+..++.++ . -++++. ++|+++.... + ...+.++++++++ .|+|++++|...
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchh
Confidence 48999999999999999998 5 477865 6788765321 2 3457899999976 899999998543
No 257
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=97.33 E-value=0.0018 Score=55.78 Aligned_cols=99 Identities=15% Similarity=0.208 Sum_probs=73.2
Q ss_pred ccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEec
Q 035615 76 KLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 76 ~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~~ 138 (223)
.+.|+||++|| .+++.++.+..+..+|++|.+..|..-... + +....+++|.++.+|+|..-.
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 37899999999 588999999999999999998877543221 1 223578999999999997754
Q ss_pred cCC--h--------h--hhhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 139 ALT--E--------Q--THHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 139 p~t--~--------~--t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
=-. . + ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~EI~~e 284 (323)
T 3gd5_A 234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDE 284 (323)
T ss_dssp CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCceeCHH
Confidence 111 0 0 12457999999999999999876 56555544
No 258
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.33 E-value=0.00045 Score=59.00 Aligned_cols=87 Identities=8% Similarity=0.135 Sum_probs=56.4
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC-----------CcccccChhhhhcCCcEEEEeccCCh---
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV-----------LFPYCANVYDLAVNSDVLVVCCALTE--- 142 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~-----------~~~~~~~l~el~~~aDiv~~~~p~t~--- 142 (223)
.++|+|||.|.||..+|..+...|. +|..+|...+... ......+. +.++.||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 3799999999999999999887777 8999998764211 11122455 66899999999873210
Q ss_pred -------hhhhccCHH---HHhcCCCCcEEEEcCC
Q 035615 143 -------QTHHIINKD---VMAELGKGGMIINVGR 167 (223)
Q Consensus 143 -------~t~~li~~~---~l~~mk~ga~lIN~ar 167 (223)
.+..++ .+ .+....|++++|+++.
T Consensus 93 tR~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 93 SYLDVVQSNVDMF-RALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHTTTCEEEECSS
T ss_pred CHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEcCC
Confidence 111111 12 2233348999999877
No 259
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.33 E-value=0.00025 Score=60.78 Aligned_cols=89 Identities=17% Similarity=0.291 Sum_probs=57.8
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCCC---------------cccccChhhhhcCCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSVL---------------FPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~---------------~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
-++|+|||.|.||..++..++..|. +|..+|++.+...+ .....+..+.++.||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 4699999999999999999987665 89999987542210 000123456789999999997643
Q ss_pred hh-----------hhhccC--HHHHhcCCCCcEEEEcCC
Q 035615 142 EQ-----------THHIIN--KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 142 ~~-----------t~~li~--~~~l~~mk~ga~lIN~ar 167 (223)
.. +..++. .+.+....|++++++++.
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 21 001110 122333357889999854
No 260
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=97.31 E-value=0.004 Score=55.45 Aligned_cols=104 Identities=15% Similarity=0.176 Sum_probs=72.5
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEE-EcCCCC----------------CCCC----c-ccccChhhhh-cCC
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISY-NSRRKR----------------PSVL----F-PYCANVYDLA-VNS 131 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~~~~----------------~~~~----~-~~~~~l~el~-~~a 131 (223)
.+++|+||.|-|+|++|+..|+.|...|.+|+. .|.+.. ...+ + ....+.++++ ..|
T Consensus 217 ~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~~ 296 (424)
T 3k92_A 217 IKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKDC 296 (424)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSCC
T ss_pred CCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceeccc
Confidence 468999999999999999999999999999764 444310 0001 0 1122345554 479
Q ss_pred cEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 132 DVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 132 Div~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
|+++-|.. .+.|+.+....++ -.+++-.+.+.+- . +..+.|.++.|.
T Consensus 297 DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~t-~-eA~~iL~~rGI~ 343 (424)
T 3k92_A 297 DILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPTT-I-DATKILNERGVL 343 (424)
T ss_dssp SEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCBC-H-HHHHHHHHTTCE
T ss_pred cEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCCC-H-HHHHHHHHCCCE
Confidence 99987763 5678887777775 4678888899864 3 345677777775
No 261
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.29 E-value=0.001 Score=56.82 Aligned_cols=87 Identities=23% Similarity=0.195 Sum_probs=57.6
Q ss_pred CEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-------C----------cccccChhhhhcCCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-------L----------FPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-------~----------~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
++|+|||.|.+|..++..+...|. +|..+|.+.+..+ . .....+. +.++.||+|+++.+..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999998886 8989998764321 0 0112455 6789999999998532
Q ss_pred hh-----------hhhccC--HHHHhcCCCCcEEEEcCC
Q 035615 142 EQ-----------THHIIN--KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 142 ~~-----------t~~li~--~~~l~~mk~ga~lIN~ar 167 (223)
.. +..++. .+.+....|++++++++.
T Consensus 82 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp -------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 11 011110 122333458899999754
No 262
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.29 E-value=0.00023 Score=59.02 Aligned_cols=79 Identities=23% Similarity=0.226 Sum_probs=56.4
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCC----------------C--------------Cc--cc-
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPS----------------V--------------LF--PY- 120 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~----------------~--------------~~--~~- 120 (223)
..|++++|.|+|.|.+|..+++.|...|. ++.++|+..-.. . .. ..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 46899999999999999999999999998 577776543110 0 00 00
Q ss_pred -----ccChhhhhcCCcEEEEeccCChhhhhccCHHHHh
Q 035615 121 -----CANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA 154 (223)
Q Consensus 121 -----~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~ 154 (223)
..+++++++++|+|+.++. +.+++..+++...+
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~ 141 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVA 141 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHH
Confidence 0134567788999988876 66778777766554
No 263
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=97.28 E-value=0.0049 Score=55.14 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=70.9
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEE-EcCCC-----CC---------------CCCc--ccccChhhhhc-C
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISY-NSRRK-----RP---------------SVLF--PYCANVYDLAV-N 130 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~~~-----~~---------------~~~~--~~~~~l~el~~-~ 130 (223)
.+++|++|.|.|+|++|+.+|+.|...|.+|+. .|.+. .- ..++ ....+.++++. .
T Consensus 231 ~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~~ 310 (440)
T 3aog_A 231 LQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGLP 310 (440)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTCC
T ss_pred CCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcCC
Confidence 358899999999999999999999999999874 44321 00 0011 01224456653 7
Q ss_pred CcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 131 SDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 131 aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
||+++-|.. .+.++.+....++ -.+++-.+.+.+- .+ -.+.|.++.+.
T Consensus 311 ~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~e-A~~iL~~~GI~ 358 (440)
T 3aog_A 311 VEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PA-ADDILLEKGVL 358 (440)
T ss_dssp CSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HH-HHHHHHHHTCE
T ss_pred CcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HH-HHHHHHHCCCE
Confidence 999988764 4567777777774 4688888888874 33 34566666665
No 264
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.28 E-value=0.00032 Score=59.64 Aligned_cols=92 Identities=23% Similarity=0.220 Sum_probs=62.8
Q ss_pred CEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC---------------C--cccccChhhhhcCCcEEEEeccC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV---------------L--FPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~---------------~--~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
++|+|||.|.+|..+|..|...|. +|..+|+.++..+ . .....+ .+.++.||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 589999999999999999988787 8999998764321 0 011234 7889999999999753
Q ss_pred C--h-hhh-hcc--C-------HHHHhcCCCCcEEEEcCCCcccCHH
Q 035615 141 T--E-QTH-HII--N-------KDVMAELGKGGMIINVGRGALIDEK 174 (223)
Q Consensus 141 t--~-~t~-~li--~-------~~~l~~mk~ga~lIN~arg~~vd~~ 174 (223)
. + .++ .++ | .+.+....|++++++++ ..+|.-
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~ 124 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVM 124 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHH
Confidence 2 1 111 111 1 12344557899999998 455543
No 265
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.28 E-value=0.00073 Score=58.24 Aligned_cols=91 Identities=9% Similarity=0.116 Sum_probs=60.7
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC---------------Ccc--cccChhhhhcCCcEEEEec
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV---------------LFP--YCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---------------~~~--~~~~l~el~~~aDiv~~~~ 138 (223)
.+.++|+|||.|.+|..+|..+...|+ +|..+|+.++..+ ... ...+. +.++.||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 456799999999999999999988888 9999998875421 011 12344 7889999999997
Q ss_pred cCC--hh-hh-hcc--CH-------HHHhcCCCCcEEEEcCCC
Q 035615 139 ALT--EQ-TH-HII--NK-------DVMAELGKGGMIINVGRG 168 (223)
Q Consensus 139 p~t--~~-t~-~li--~~-------~~l~~mk~ga~lIN~arg 168 (223)
+.. +. ++ .++ |. +.+....|++++++++.-
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP 126 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP 126 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 422 11 11 111 11 223334688999999853
No 266
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.27 E-value=0.00016 Score=62.84 Aligned_cols=62 Identities=21% Similarity=0.199 Sum_probs=47.6
Q ss_pred CCEEEEEecChHHHH-HHHHHHhC-CCEEE-EEcCCCCCCC-------CcccccChhhhhcC--CcEEEEeccC
Q 035615 79 GMQVGIVRLGNIGSE-VLNRLQAF-GFIIS-YNSRRKRPSV-------LFPYCANVYDLAVN--SDVLVVCCAL 140 (223)
Q Consensus 79 g~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~~-------~~~~~~~l~el~~~--aDiv~~~~p~ 140 (223)
..+|||||+|.||+. .++.++.. ++++. ++|+++.... ....+.++++++++ .|+|++++|.
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 78 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPP 78 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCc
Confidence 468999999999995 88888876 77865 7788764322 22346899999974 5999999983
No 267
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.26 E-value=0.00055 Score=59.05 Aligned_cols=91 Identities=19% Similarity=0.223 Sum_probs=59.9
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC--------------CcccccChhhhhcCCcEEEEeccC
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV--------------LFPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------------~~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
-.+++|+|||.|.||..+|..+...|. ++..+|+.....+ ......+..+.++.||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 357899999999999999999987777 8999998653211 111123445778999999998753
Q ss_pred C--h-hhh-hcc--C-------HHHHhcCCCCcEEEEcCC
Q 035615 141 T--E-QTH-HII--N-------KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 141 t--~-~t~-~li--~-------~~~l~~mk~ga~lIN~ar 167 (223)
. | .++ .++ | .+.+....|++++++++.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 2 1 122 222 1 123444568999999974
No 268
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=97.26 E-value=0.003 Score=53.96 Aligned_cols=99 Identities=16% Similarity=0.233 Sum_probs=74.1
Q ss_pred ccC-CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------------CcccccChhhhhcCCcEEEEe
Q 035615 76 KLG-GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------------LFPYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~-g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~~~~~~~l~el~~~aDiv~~~ 137 (223)
.+. |++|+++| .+++.++.+..+..+|++|.+..|..-... .+....+++|.++.+|+|..-
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~ 221 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITD 221 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEec
Confidence 478 99999999 578999999999999999998877543221 112357899999999999876
Q ss_pred c--cCCh--h--------hhhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 138 C--ALTE--Q--------THHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 138 ~--p~t~--~--------t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
. .... + ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 222 ~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 222 TWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp CSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred CcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 5 0111 0 13557999999999999999887 56655544
No 269
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.25 E-value=0.00021 Score=63.85 Aligned_cols=63 Identities=16% Similarity=0.114 Sum_probs=47.5
Q ss_pred CCEEEEEecChHHH-HHHHHHHhC-CCEE-EEEcCCCCCCC------Ccc-----cccChhhhhc--CCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGS-EVLNRLQAF-GFII-SYNSRRKRPSV------LFP-----YCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~-~~a~~l~~~-G~~V-~~~~~~~~~~~------~~~-----~~~~l~el~~--~aDiv~~~~p~t 141 (223)
-.+|||||+|.||+ .+++.+... ++++ .++|+++.... +.. .+.+++++++ +.|+|++++|..
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~ 161 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNS 161 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCch
Confidence 35899999999997 888888765 5775 47787764321 221 3678999987 799999999854
No 270
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=97.25 E-value=0.0033 Score=53.91 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=74.5
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEec
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~~ 138 (223)
.+.|.+|+++|= +++.++.+..+..+|++|.+..|..-... + .....+++|.++.+|+|..-.
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 378999999995 89999999999999999998887543221 1 223578999999999998844
Q ss_pred cC-------Chh-----hhhccCHHHHhcCCCCcEEEEcCC---CcccCHH
Q 035615 139 AL-------TEQ-----THHIINKDVMAELGKGGMIINVGR---GALIDEK 174 (223)
Q Consensus 139 p~-------t~~-----t~~li~~~~l~~mk~ga~lIN~ar---g~~vd~~ 174 (223)
=. .++ ...-++++.++.+|++++|.-+.- |.=|+.+
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~e 282 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDD 282 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCHH
Confidence 20 111 235679999999999999999874 5545443
No 271
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.22 E-value=0.0032 Score=56.98 Aligned_cols=98 Identities=14% Similarity=0.110 Sum_probs=70.3
Q ss_pred cccCCCEEEEEecC----------hHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhh
Q 035615 75 FKLGGMQVGIVRLG----------NIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQT 144 (223)
Q Consensus 75 ~~l~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t 144 (223)
..+.|++|+|+|+- .=...+++.|...|.+|.+|||.-..........++++.++.+|.|++++... +-
T Consensus 349 ~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~~-~f 427 (478)
T 3g79_A 349 KKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVVLAGHS-AY 427 (478)
T ss_dssp CCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCBTTBCEESCHHHHHTTCSEEEECSCCH-HH
T ss_pred cCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccccCcceecCHHHHHhcCCEEEEecCCH-HH
Confidence 45889999999963 23678999999999999999997764333333568899999999999998744 32
Q ss_pred hhccCH-HHHhcCC-CCcEEEEcCCCcccCHHHH
Q 035615 145 HHIINK-DVMAELG-KGGMIINVGRGALIDEKEM 176 (223)
Q Consensus 145 ~~li~~-~~l~~mk-~ga~lIN~arg~~vd~~al 176 (223)
+. ++- ...+.|+ +..+++|. |+- .|.+.+
T Consensus 428 ~~-~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 428 SS-LKADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp HS-CCHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred Hh-hhHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 32 343 3445677 37889994 654 454443
No 272
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=97.21 E-value=0.0015 Score=55.75 Aligned_cols=91 Identities=12% Similarity=0.168 Sum_probs=68.9
Q ss_pred ccCCCEEEEEec---ChHHHHHHHHHHhCCCEEEEEcCCCCCCC--CcccccChhhhhcCCcEEEEeccCCh--------
Q 035615 76 KLGGMQVGIVRL---GNIGSEVLNRLQAFGFIISYNSRRKRPSV--LFPYCANVYDLAVNSDVLVVCCALTE-------- 142 (223)
Q Consensus 76 ~l~g~~vgIiG~---G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--~~~~~~~l~el~~~aDiv~~~~p~t~-------- 142 (223)
.+.|++|+++|= +++.++.+..+..+|++|.+..|..-... ......+++|.++.+|+|....--.+
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~q~er~~~~~~~ 223 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQ 223 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCCCTTTCCSSCCS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCCCCEEEeccchhhccccchhH
Confidence 478999999996 57999999999999999988876432111 11235689999999999987431111
Q ss_pred ---hhhhccCHHHHhcCCCCcEEEEcC
Q 035615 143 ---QTHHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 143 ---~t~~li~~~~l~~mk~ga~lIN~a 166 (223)
....-++.+.++.+|++++|..+.
T Consensus 224 ~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 224 EGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp TTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred HHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 123557999999999999999887
No 273
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.21 E-value=0.00071 Score=58.38 Aligned_cols=106 Identities=14% Similarity=0.217 Sum_probs=69.9
Q ss_pred CEEEEEecChHHHHHHHHHHh---------CCCEEE-EEcCCCCCCCC-------------ccccc--Chhhhhc--CCc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQA---------FGFIIS-YNSRRKRPSVL-------------FPYCA--NVYDLAV--NSD 132 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~---------~G~~V~-~~~~~~~~~~~-------------~~~~~--~l~el~~--~aD 132 (223)
.+|||||+|.||+.+++.+.. .+.+|. ++|++...... ...+. +++++++ +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 479999999999999999875 466765 55665432111 11233 8888885 589
Q ss_pred EEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCCce
Q 035615 133 VLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALI-DEKEMLQFLVQGDIN 186 (223)
Q Consensus 133 iv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~v-d~~al~~aL~~~~i~ 186 (223)
+|+.++|....... .-+-....|+.|.-+|....+.+. +-+.|.++.++.+..
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999985432111 112345567888888877666654 567777777777664
No 274
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.20 E-value=0.0003 Score=63.26 Aligned_cols=64 Identities=14% Similarity=0.115 Sum_probs=48.3
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-------Ccc----cc---cChhhhhcCCcEEEEeccCC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-------LFP----YC---ANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------~~~----~~---~~l~el~~~aDiv~~~~p~t 141 (223)
.+++|+|+|.|.||+.+++.|...|++|.+++|+..... ... .. .++.++++.+|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 478999999999999999999999999999998753211 110 11 24557788999999999854
No 275
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.20 E-value=0.00099 Score=57.30 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=61.5
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-------C--------cc-cccChhhhhcCCcEEEEeccC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-------L--------FP-YCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-------~--------~~-~~~~l~el~~~aDiv~~~~p~ 140 (223)
+.++|+|||.|.||..+|..+...|+ +|..+|+.+...+ . .. ...+..+.++.||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 35799999999999999999987777 9999998875421 1 11 112335788999999999743
Q ss_pred C--hh-hh-hcc--CH-------HHHhcCCCCcEEEEcCCCcccCH
Q 035615 141 T--EQ-TH-HII--NK-------DVMAELGKGGMIINVGRGALIDE 173 (223)
Q Consensus 141 t--~~-t~-~li--~~-------~~l~~mk~ga~lIN~arg~~vd~ 173 (223)
. +. ++ .++ |. +.+....|++++++++ ..+|.
T Consensus 84 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~ 127 (321)
T 3p7m_A 84 PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDI 127 (321)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHH
T ss_pred CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHH
Confidence 2 11 11 111 11 2233345889999995 34443
No 276
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.20 E-value=0.00077 Score=57.49 Aligned_cols=62 Identities=11% Similarity=0.163 Sum_probs=48.8
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCCCEE-EEEcCCCCCCC------CcccccChhhhh----------cCCcEEEEeccCC
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFGFII-SYNSRRKRPSV------LFPYCANVYDLA----------VNSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G~~V-~~~~~~~~~~~------~~~~~~~l~el~----------~~aDiv~~~~p~t 141 (223)
.+|||||+ |.||+..++.++..+.++ .++|+++.... ....+.++++++ .+.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 58999999 789999999999889885 46787765421 233467888887 6799999999854
No 277
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.20 E-value=0.0005 Score=59.10 Aligned_cols=62 Identities=16% Similarity=0.194 Sum_probs=48.4
Q ss_pred CCCEEEEEecChHHH-HHHHHHHhC-CCEEE-EEcCCCCCCCCcccccChhhhhcC---CcEEEEeccC
Q 035615 78 GGMQVGIVRLGNIGS-EVLNRLQAF-GFIIS-YNSRRKRPSVLFPYCANVYDLAVN---SDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~-~~a~~l~~~-G~~V~-~~~~~~~~~~~~~~~~~l~el~~~---aDiv~~~~p~ 140 (223)
+-.+|||||+|.||+ ..++.++.. ++++. ++|++.+. .+...+.+++++++. .|+|++++|.
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~-~g~~~~~~~~~ll~~~~~vD~V~i~tp~ 91 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV-EGVNSYTTIEAMLDAEPSIDAVSLCMPP 91 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC-TTSEEESSHHHHHHHCTTCCEEEECSCH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh-cCCCccCCHHHHHhCCCCCCEEEEeCCc
Confidence 346899999999999 688888875 67765 67777543 345567899999865 8999999983
No 278
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=97.19 E-value=0.01 Score=52.69 Aligned_cols=104 Identities=14% Similarity=0.175 Sum_probs=71.6
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHh-CCCEEEE-EcCCC-----C--C-------------CCCc--ccccChhhhh-c
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQA-FGFIISY-NSRRK-----R--P-------------SVLF--PYCANVYDLA-V 129 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~-~G~~V~~-~~~~~-----~--~-------------~~~~--~~~~~l~el~-~ 129 (223)
.+++|++|.|.|+|++|+..++.|.. .|.+|+. .|.+. + . ..++ ....+.++++ .
T Consensus 205 ~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~~ 284 (415)
T 2tmg_A 205 IDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLEL 284 (415)
T ss_dssp CCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTTC
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhcC
Confidence 46899999999999999999999998 9999874 34321 0 0 0011 0122345665 3
Q ss_pred CCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 130 NSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 130 ~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.||+++-|.. .+.++.+....++ -.+++-.+.+.+- .+ -.+.|.++.+.
T Consensus 285 ~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~-a~~~l~~~Gi~ 333 (415)
T 2tmg_A 285 DVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PE-ADEILSRRGIL 333 (415)
T ss_dssp SCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HH-HHHHHHHTTCE
T ss_pred CCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HH-HHHHHHHCCCE
Confidence 7999988774 4567888888884 5678888888864 33 34556676665
No 279
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.18 E-value=0.00039 Score=60.37 Aligned_cols=63 Identities=17% Similarity=0.155 Sum_probs=48.4
Q ss_pred CCEEEEEecChHHHH-HHHHHHhC-CCEEE-EEcCCCCCCC----CcccccChhhhhcC--CcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSE-VLNRLQAF-GFIIS-YNSRRKRPSV----LFPYCANVYDLAVN--SDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~~----~~~~~~~l~el~~~--aDiv~~~~p~t 141 (223)
-.+|||||+|.||+. .+..++.. ++++. ++|++++... ....+.+++++++. .|+|++++|..
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDN 76 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChH
Confidence 358999999999997 67777765 77865 6788765432 23457899999976 89999999854
No 280
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=97.18 E-value=0.0024 Score=54.43 Aligned_cols=92 Identities=16% Similarity=0.191 Sum_probs=70.7
Q ss_pred ccCCCEEEEEec---ChHHHHHHHHHHhC-CCEEEEEcCCCCCCC-------C--cccccChhhhhcCCcEEEEeccCCh
Q 035615 76 KLGGMQVGIVRL---GNIGSEVLNRLQAF-GFIISYNSRRKRPSV-------L--FPYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 76 ~l~g~~vgIiG~---G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~-------~--~~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
.+.|++|+++|= +++.++.+..+..+ |++|.+..|..-... + +....+++|.++.+|+|....=-.+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~e 225 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKE 225 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCST
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccc
Confidence 378999999996 69999999999999 999998876432111 2 2235789999999999987653221
Q ss_pred ------h-h----hhccCHHHHhcCCCCcEEEEcCC
Q 035615 143 ------Q-T----HHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 143 ------~-t----~~li~~~~l~~mk~ga~lIN~ar 167 (223)
+ . ..-++++.++.+|++++|.-+.-
T Consensus 226 r~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP 261 (299)
T 1pg5_A 226 RFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLP 261 (299)
T ss_dssp TSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSC
T ss_pred cccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCC
Confidence 1 1 35679999999999999998874
No 281
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=97.17 E-value=0.0031 Score=54.27 Aligned_cols=99 Identities=12% Similarity=0.143 Sum_probs=73.5
Q ss_pred ccCCCEEEEEecC--hHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEe
Q 035615 76 KLGGMQVGIVRLG--NIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~ 137 (223)
.+.|++|+++|=| ++.++.+..+..+|++|.+..|..-... + +....+++|.++.+|+|..-
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 4789999999975 9999999999999999998877542211 1 22357899999999999874
Q ss_pred ccC-------Chh-----hhhccCHHHHhcC-CCCcEEEEcCC---CcccCHH
Q 035615 138 CAL-------TEQ-----THHIINKDVMAEL-GKGGMIINVGR---GALIDEK 174 (223)
Q Consensus 138 ~p~-------t~~-----t~~li~~~~l~~m-k~ga~lIN~ar---g~~vd~~ 174 (223)
.=. .++ ...-++++.++.+ |++++|.-+.- |.=|+.+
T Consensus 244 ~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~e 296 (325)
T 1vlv_A 244 VWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYE 296 (325)
T ss_dssp CCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHH
T ss_pred cccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccCHH
Confidence 321 011 2356799999999 99999999874 5544443
No 282
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.16 E-value=0.00081 Score=53.70 Aligned_cols=62 Identities=16% Similarity=0.248 Sum_probs=48.0
Q ss_pred CEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCCC-----------cccccChhhhhcCCcEEEEeccCC
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSVL-----------FPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~-----------~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
++|.|.| .|.||+.+++.|...|++|++.+|++..... .....++.++++.+|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 7899999 5999999999999999999999988654321 112244667889999998877543
No 283
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=97.15 E-value=0.0026 Score=56.12 Aligned_cols=96 Identities=14% Similarity=0.097 Sum_probs=67.4
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHh---c
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMA---E 155 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~---~ 155 (223)
-.++.|+|.|.+|+++++.++.+|++|.++|+.+.... .+-+..+|-++...| ...+.. +. .
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~--------~~~fp~a~~~~~~~p-----~~~~~~--~~~~~~ 268 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFAT--------TARFPTADEVVVDWP-----HRYLAA--QAEAGA 268 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSC--------TTTCSSSSEEEESCH-----HHHHHH--HHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcc--------cccCCCceEEEeCCh-----HHHHHh--hccccC
Confidence 45899999999999999999999999999987664211 122456665554444 111111 11 1
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHcCCceEEE
Q 035615 156 LGKGGMIINVGRGALIDEKEMLQFLVQGDINGVG 189 (223)
Q Consensus 156 mk~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~ 189 (223)
+.+++.+|=+.++.-.|...|..+|+.+...+.+
T Consensus 269 ~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG 302 (386)
T 2we8_A 269 IDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIG 302 (386)
T ss_dssp CCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEE
T ss_pred CCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEE
Confidence 6778888888899889999999999887444333
No 284
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=97.15 E-value=0.0028 Score=54.88 Aligned_cols=98 Identities=15% Similarity=0.102 Sum_probs=72.1
Q ss_pred ccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEec
Q 035615 76 KLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 76 ~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~~ 138 (223)
.+.|++|++|| .+++.++.+..+..+|++|.+..|..-... + +....+++ .++.+|+|..-+
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 58899999999 589999999999999999998877543221 1 12356788 999999998633
Q ss_pred --cC----C--hh----h--hhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 139 --AL----T--EQ----T--HHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 139 --p~----t--~~----t--~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
.. . ++ . ..-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 251 w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcLPa~Rg~EIt~e 303 (339)
T 4a8t_A 251 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 303 (339)
T ss_dssp SSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred cccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 11 0 11 1 2557899999999999999887 56555543
No 285
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.13 E-value=0.00023 Score=61.56 Aligned_cols=89 Identities=7% Similarity=-0.002 Sum_probs=60.1
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCCC----------------cccccChhhhhcCCcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSVL----------------FPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~----------------~~~~~~l~el~~~aDiv~~~~p 139 (223)
..++|+|||.|.||..+|..+...|+ +|..+|...+..++ .....+.++ ++.||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999988787 89999986532210 011235555 899999999864
Q ss_pred CC--h-hhh-hcc--C-------HHHHhcCCCCcEEEEcCC
Q 035615 140 LT--E-QTH-HII--N-------KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 140 ~t--~-~t~-~li--~-------~~~l~~mk~ga~lIN~ar 167 (223)
.. | .++ .++ | .+.+....|++++++++.
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 32 1 111 111 1 123344478999999984
No 286
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.13 E-value=0.0009 Score=57.23 Aligned_cols=62 Identities=8% Similarity=0.132 Sum_probs=48.5
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCCCEEE-EEcCCCCCCC------CcccccChhhhh-----------cCCcEEEEeccC
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFGFIIS-YNSRRKRPSV------LFPYCANVYDLA-----------VNSDVLVVCCAL 140 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~-~~~~~~~~~~------~~~~~~~l~el~-----------~~aDiv~~~~p~ 140 (223)
.++||||+ |.||+..++.++..+.++. ++|+++.... ....+.++++++ .+.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 7899999999998898854 6787765421 233467888887 578999999985
Q ss_pred C
Q 035615 141 T 141 (223)
Q Consensus 141 t 141 (223)
.
T Consensus 84 ~ 84 (318)
T 3oa2_A 84 Y 84 (318)
T ss_dssp G
T ss_pred H
Confidence 4
No 287
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.11 E-value=0.00086 Score=57.82 Aligned_cols=89 Identities=16% Similarity=0.246 Sum_probs=59.7
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC--------C-------cccccChhhhhcCCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV--------L-------FPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------~-------~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
.++|+|||.|.||..+|..+...|. +|..+|+..+..+ . .....+..+.++.||+|+++.+..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGAN 84 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccC
Confidence 5789999999999999999988777 8999998654211 0 111223356789999999997532
Q ss_pred --hh-hh-hcc--C-------HHHHhcCCCCcEEEEcCC
Q 035615 142 --EQ-TH-HII--N-------KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 142 --~~-t~-~li--~-------~~~l~~mk~ga~lIN~ar 167 (223)
+. ++ .++ | .+.+....|++++++++.
T Consensus 85 ~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 85 QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 11 11 111 1 123344568899999984
No 288
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.11 E-value=0.0017 Score=54.76 Aligned_cols=101 Identities=19% Similarity=0.189 Sum_probs=60.5
Q ss_pred CEEEEEecChHHHHHHHHHHh----CCCEEE-EEcCCCCCCCCcccccChhhhhc--CCcEEEEeccCChhhhhccCHHH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQA----FGFIIS-YNSRRKRPSVLFPYCANVYDLAV--NSDVLVVCCALTEQTHHIINKDV 152 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~----~G~~V~-~~~~~~~~~~~~~~~~~l~el~~--~aDiv~~~~p~t~~t~~li~~~~ 152 (223)
.+|||||+|.||+..++.+.. -++++. +++++.........+.+++++++ +.|+|++++|....... .
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a~~~g~~~~~~~ell~~~~vD~V~i~tp~~~H~~~-----~ 82 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVRQISLEDALRSQEIDVAYICSESSSHEDY-----I 82 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEETTEEBCCHHHHHHCSSEEEEEECSCGGGHHHH-----H
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHHHHcCCCCCCHHHHhcCCCCCEEEEeCCcHhHHHH-----H
Confidence 589999999999999888764 366765 56765432211112478999986 68999999984432221 2
Q ss_pred HhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCc
Q 035615 153 MAELGKGG-MIINV-GRGALIDEKEMLQFLVQGDI 185 (223)
Q Consensus 153 l~~mk~ga-~lIN~-arg~~vd~~al~~aL~~~~i 185 (223)
...++.|. +++.- ---.+-+.+.|.++.++.++
T Consensus 83 ~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 117 (294)
T 1lc0_A 83 RQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGR 117 (294)
T ss_dssp HHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 22334444 45542 11122344556666655444
No 289
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.10 E-value=0.00029 Score=60.40 Aligned_cols=62 Identities=23% Similarity=0.223 Sum_probs=47.7
Q ss_pred CEEEEEecChHHHHHHHHHHhCC---CEE-EEEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFG---FII-SYNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G---~~V-~~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
.++||||+|.||+..++.++..+ +++ .++|+++.... +. ..+.+++++++ +.|+|++++|..
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 77 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHP 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcH
Confidence 58999999999999999988654 465 46788764422 22 34689999997 699999999854
No 290
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.09 E-value=0.00043 Score=56.11 Aligned_cols=62 Identities=10% Similarity=0.106 Sum_probs=45.3
Q ss_pred CCEEEEEecChHHHHHHHH--HHhCCCEEE-EEcCCCCCCC----C--cccccChhhhhc-CCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNR--LQAFGFIIS-YNSRRKRPSV----L--FPYCANVYDLAV-NSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~--l~~~G~~V~-~~~~~~~~~~----~--~~~~~~l~el~~-~aDiv~~~~p~t 141 (223)
.++++|||.|++|+.+++. ... |+++. ++|.++.... + .....+++++++ +.|+|++++|..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 3689999999999999985 334 88865 6677665432 1 112567888886 589999999844
No 291
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.08 E-value=0.0024 Score=55.26 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=70.8
Q ss_pred ccCCCEEEEEecC--hHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEe
Q 035615 76 KLGGMQVGIVRLG--NIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~ 137 (223)
.+.|++|+++|=| ++.++++..+..+|++|.+..|..-... + .....+++|.++.+|+|..-
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 231 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence 5889999999975 9999999999999999998877542211 1 22357899999999999874
Q ss_pred ccC--------Chh-----hhhccCHHHHhcC-CCCcEEEEcCC
Q 035615 138 CAL--------TEQ-----THHIINKDVMAEL-GKGGMIINVGR 167 (223)
Q Consensus 138 ~p~--------t~~-----t~~li~~~~l~~m-k~ga~lIN~ar 167 (223)
.=. ..+ ...-++.+.++.+ ||+++|.-+.-
T Consensus 232 ~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (335)
T 1dxh_A 232 VWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP 275 (335)
T ss_dssp CCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSC
T ss_pred CccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCC
Confidence 420 111 2356799999999 99999998875
No 292
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=97.08 E-value=0.0044 Score=53.93 Aligned_cols=93 Identities=10% Similarity=0.090 Sum_probs=68.3
Q ss_pred cccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC------------------CcccccChhhhhcCCcEEE
Q 035615 75 FKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV------------------LFPYCANVYDLAVNSDVLV 135 (223)
Q Consensus 75 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------------------~~~~~~~l~el~~~aDiv~ 135 (223)
..|.|++|++||= -++.++.+..+..+|++|.+..|..-... .+....+++|.++.+|+|.
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvy 263 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIV 263 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEE
Confidence 4479999999994 57888888899999999998877543211 1223578999999999998
Q ss_pred Eec--cCChh----------hhhccCHHHHhc--CCCCcEEEEcCC
Q 035615 136 VCC--ALTEQ----------THHIINKDVMAE--LGKGGMIINVGR 167 (223)
Q Consensus 136 ~~~--p~t~~----------t~~li~~~~l~~--mk~ga~lIN~ar 167 (223)
.-. +...+ ...-++.+.++. +|++++|.-+.-
T Consensus 264 td~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcLP 309 (353)
T 3sds_A 264 TDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCLP 309 (353)
T ss_dssp ECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECSC
T ss_pred eCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCCC
Confidence 643 21111 124679999998 899999998873
No 293
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.07 E-value=0.00096 Score=57.18 Aligned_cols=111 Identities=16% Similarity=0.184 Sum_probs=67.4
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC---------------CcccccChhhhhcCCcEEEEeccC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV---------------LFPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~---------------~~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
..++|+|||.|.+|..++..+...|. +|..+|..++..+ ......+..+.++.||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 35799999999999999999887674 8999997653211 001112446779999999999864
Q ss_pred Chh---hh--------hccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHcCCceEE
Q 035615 141 TEQ---TH--------HIIN--KDVMAELGKGGMIINVGRGALIDEKEMLQF--LVQGDINGV 188 (223)
Q Consensus 141 t~~---t~--------~li~--~~~l~~mk~ga~lIN~arg~~vd~~al~~a--L~~~~i~~a 188 (223)
... ++ .++. .+.+....|++++|+++.--=+....+.+. +...++.|.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEec
Confidence 321 11 1110 123334478999999763222233333333 333456555
No 294
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.07 E-value=0.00055 Score=59.53 Aligned_cols=85 Identities=21% Similarity=0.233 Sum_probs=61.2
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC------CCccc---ccC---hhhhhcCCcEEEEeccCChhhh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS------VLFPY---CAN---VYDLAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~---~~~---l~el~~~aDiv~~~~p~t~~t~ 145 (223)
.|++|.|+|.|.||..+++.++.+|++|++.++++++. .++.. ..+ +.++....|+|+.++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 68999999999999999999999999999988766432 12211 112 23344568999998864321
Q ss_pred hccCHHHHhcCCCCcEEEEcCC
Q 035615 146 HIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~ar 167 (223)
-...++.|+++..+|+++.
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCC
T ss_pred ---HHHHHHHHhcCCEEEEEcc
Confidence 2456677888888888764
No 295
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=97.07 E-value=0.0004 Score=62.99 Aligned_cols=109 Identities=11% Similarity=0.172 Sum_probs=70.3
Q ss_pred CCEEEEEecChH--HHHHHHHHH---hC-CCEEEEEcCCCCCCC-----------------CcccccChhhhhcCCcEEE
Q 035615 79 GMQVGIVRLGNI--GSEVLNRLQ---AF-GFIISYNSRRKRPSV-----------------LFPYCANVYDLAVNSDVLV 135 (223)
Q Consensus 79 g~~vgIiG~G~i--G~~~a~~l~---~~-G~~V~~~~~~~~~~~-----------------~~~~~~~l~el~~~aDiv~ 135 (223)
.++|+|||.|.+ |.++|..+. ++ |.+|..||+..+..+ ......++++.++.||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 468999999997 565566663 33 889999998764311 1112357778899999999
Q ss_pred EeccCCh-----------hhhhccC----------------------------HHHHhcCCCCcEEEEcCCCcccCHHHH
Q 035615 136 VCCALTE-----------QTHHIIN----------------------------KDVMAELGKGGMIINVGRGALIDEKEM 176 (223)
Q Consensus 136 ~~~p~t~-----------~t~~li~----------------------------~~~l~~mk~ga~lIN~arg~~vd~~al 176 (223)
+++|... .-.+++. .+.+....|++++||++.---+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 9997410 0011110 123444578999999987665555555
Q ss_pred HHHHHcCCceEE
Q 035615 177 LQFLVQGDINGV 188 (223)
Q Consensus 177 ~~aL~~~~i~~a 188 (223)
.+ +...++.|.
T Consensus 163 ~k-~p~~rviG~ 173 (480)
T 1obb_A 163 TR-TVPIKAVGF 173 (480)
T ss_dssp HH-HSCSEEEEE
T ss_pred HH-CCCCcEEec
Confidence 55 555566654
No 296
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.05 E-value=0.0021 Score=56.05 Aligned_cols=83 Identities=13% Similarity=0.285 Sum_probs=53.7
Q ss_pred CCCEEEEEe-cChHHHHHHHHHHhCC-CEEEEEcCCCCCCCC-------cc-------cccChhhhhcCCcEEEEeccCC
Q 035615 78 GGMQVGIVR-LGNIGSEVLNRLQAFG-FIISYNSRRKRPSVL-------FP-------YCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~~~-------~~-------~~~~l~el~~~aDiv~~~~p~t 141 (223)
...+|+|+| +|.+|+.+.+.|.... +++..+......... +. ...+ ++.++.+|+|+.|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346899999 9999999999998764 477665433222110 00 0122 45567899999999854
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
.. .+.....+.|+.+|+.+-
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSS
T ss_pred hH------HHHHHHHhCCCEEEECCc
Confidence 22 222222267899998875
No 297
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=97.05 E-value=0.0032 Score=54.77 Aligned_cols=98 Identities=14% Similarity=0.080 Sum_probs=72.1
Q ss_pred ccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEec
Q 035615 76 KLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 76 ~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~~ 138 (223)
.+.|++|++|| .+++.++.+..+..+|++|.+..|..-... + +....+++ .++.+|+|..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 58899999999 589999999999999999998877543221 1 12356788 999999998632
Q ss_pred ----cC---C-hh-----h-hhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 139 ----AL---T-EQ-----T-HHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 139 ----p~---t-~~-----t-~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
.. . ++ . ..-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 281 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDE 281 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCHH
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCHH
Confidence 10 0 11 1 2557899999999999999887 56555543
No 298
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.04 E-value=0.0007 Score=60.49 Aligned_cols=63 Identities=10% Similarity=0.110 Sum_probs=48.2
Q ss_pred CCEEEEEecChHHHHHHHHHHhC-CCEE-EEEcCCCCCCC---------C---ccccc----Chhhhhc--CCcEEEEec
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF-GFII-SYNSRRKRPSV---------L---FPYCA----NVYDLAV--NSDVLVVCC 138 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~-G~~V-~~~~~~~~~~~---------~---~~~~~----~l~el~~--~aDiv~~~~ 138 (223)
-.+|||||+|.||+..++.+... ++++ .++|++++... + ...+. +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 46899999999999999988875 6776 47787764321 1 23356 8999997 589999999
Q ss_pred cCC
Q 035615 139 ALT 141 (223)
Q Consensus 139 p~t 141 (223)
|..
T Consensus 100 p~~ 102 (444)
T 2ixa_A 100 PWE 102 (444)
T ss_dssp CGG
T ss_pred CcH
Confidence 844
No 299
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.04 E-value=0.0012 Score=59.81 Aligned_cols=64 Identities=19% Similarity=0.263 Sum_probs=49.3
Q ss_pred CCCEEEEEec----ChHHHHHHHHHHhC--CCEEE-EEcCCCCCCC------Cc---ccccChhhhhc--CCcEEEEecc
Q 035615 78 GGMQVGIVRL----GNIGSEVLNRLQAF--GFIIS-YNSRRKRPSV------LF---PYCANVYDLAV--NSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~----G~iG~~~a~~l~~~--G~~V~-~~~~~~~~~~------~~---~~~~~l~el~~--~aDiv~~~~p 139 (223)
.-.+|||||+ |.||+..++.++.. ++++. ++|+++.... +. ..+.+++++++ +.|+|++++|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 3468999999 99999999999876 77864 7787764321 22 25788999985 6899999998
Q ss_pred CC
Q 035615 140 LT 141 (223)
Q Consensus 140 ~t 141 (223)
..
T Consensus 118 ~~ 119 (479)
T 2nvw_A 118 VP 119 (479)
T ss_dssp HH
T ss_pred cH
Confidence 43
No 300
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.04 E-value=0.00093 Score=57.35 Aligned_cols=110 Identities=15% Similarity=0.178 Sum_probs=65.9
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCCC--------------cccccChhhhhcCCcEEEEeccCCh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSVL--------------FPYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~--------------~~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
.++|+|||.|.+|..++..+...+. ++..+|...++.++ .....+..+.++.||+|+++.+...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~ 84 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 3689999999999999999887665 89999986532210 0111244677999999999986432
Q ss_pred h---hh--------hccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHcCCceEE
Q 035615 143 Q---TH--------HIIN--KDVMAELGKGGMIINVGRGALIDEKEMLQF--LVQGDINGV 188 (223)
Q Consensus 143 ~---t~--------~li~--~~~l~~mk~ga~lIN~arg~~vd~~al~~a--L~~~~i~~a 188 (223)
. ++ .++. .+.+....|++++|+++.--=+-...+.+. +...++.|.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEec
Confidence 1 11 1110 123334478999999843322223333333 333455554
No 301
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=97.03 E-value=0.00097 Score=55.29 Aligned_cols=62 Identities=23% Similarity=0.282 Sum_probs=47.0
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-C-------cccccChhhhhcC-CcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-L-------FPYCANVYDLAVN-SDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~-------~~~~~~l~el~~~-aDiv~~~~p 139 (223)
++++|.|.|.|.||+.+++.|...|++|++.+|+..... . .....+++++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 367899999999999999999999999999988765432 1 1122345566666 999987764
No 302
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.02 E-value=0.0014 Score=51.05 Aligned_cols=63 Identities=16% Similarity=0.148 Sum_probs=48.1
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cc-------ccccChhhhhcCCcEEEEeccCC
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LF-------PYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~-------~~~~~l~el~~~aDiv~~~~p~t 141 (223)
+++|.|.|. |.||+.+++.|...|++|++.+|++.... .. ....++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 479999997 99999999999999999999988764321 11 11234567788999998887643
No 303
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.02 E-value=0.0027 Score=55.32 Aligned_cols=93 Identities=13% Similarity=0.151 Sum_probs=57.9
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCC------CEEEEE-cCCCC-C-CC----Ccc-----cccCh-hhhhcCCcEEEEec
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFG------FIISYN-SRRKR-P-SV----LFP-----YCANV-YDLAVNSDVLVVCC 138 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G------~~V~~~-~~~~~-~-~~----~~~-----~~~~l-~el~~~aDiv~~~~ 138 (223)
.++|+|+| .|.+|+.+.+.|...+ .++..+ +++.. + .. ... ...++ .+.+..+|+|++|+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~al 88 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLAL 88 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEEEECC
Confidence 36899999 9999999999998766 466555 33221 1 10 000 11111 23456899999999
Q ss_pred cCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHH
Q 035615 139 ALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEML 177 (223)
Q Consensus 139 p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~ 177 (223)
|... ..+....++.|+.+|+.|.---.+..+.+
T Consensus 89 g~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~~ 121 (352)
T 2nqt_A 89 PHGH------SAVLAQQLSPETLIIDCGADFRLTDAAVW 121 (352)
T ss_dssp TTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHHH
T ss_pred CCcc------hHHHHHHHhCCCEEEEECCCccCCcchhh
Confidence 8652 34444444668999998865444443433
No 304
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.02 E-value=0.0013 Score=56.69 Aligned_cols=62 Identities=10% Similarity=0.218 Sum_probs=45.7
Q ss_pred CEEEEEecChHHH-HHHHHHHhC-CCEEE-EEcCCCCCC-------CCcccccChhhhhcC--CcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGS-EVLNRLQAF-GFIIS-YNSRRKRPS-------VLFPYCANVYDLAVN--SDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~-~~a~~l~~~-G~~V~-~~~~~~~~~-------~~~~~~~~l~el~~~--aDiv~~~~p~t 141 (223)
.+|||||+|.||+ ..+..++.. +++|. ++|++.... .+...+.++++++.. .|+|++++|..
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 76 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAH 76 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcH
Confidence 4899999999999 567767665 77865 678772111 123456899999976 89999999854
No 305
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.01 E-value=0.00076 Score=58.41 Aligned_cols=64 Identities=16% Similarity=0.107 Sum_probs=45.7
Q ss_pred CCCEEEEEecChHHHHHHHHHHhC--------CCEEE-EEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAF--------GFIIS-YNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~--------G~~V~-~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p 139 (223)
+--+|||||+|.||+.-++.++.. +++|. ++|++++..+ +. ..+.+++++++ +.|+|++++|
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP 103 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP 103 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC
Confidence 345899999999999877766542 56754 6788876543 22 34689999986 5799999998
Q ss_pred CC
Q 035615 140 LT 141 (223)
Q Consensus 140 ~t 141 (223)
..
T Consensus 104 ~~ 105 (393)
T 4fb5_A 104 NQ 105 (393)
T ss_dssp GG
T ss_pred hH
Confidence 54
No 306
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.01 E-value=0.0011 Score=56.19 Aligned_cols=103 Identities=12% Similarity=0.154 Sum_probs=67.9
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCCCE-EEEEcCCCC--CCCCcccccChhhhhc--CCcEEEEeccCChhhhhccCHHHH
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFGFI-ISYNSRRKR--PSVLFPYCANVYDLAV--NSDVLVVCCALTEQTHHIINKDVM 153 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G~~-V~~~~~~~~--~~~~~~~~~~l~el~~--~aDiv~~~~p~t~~t~~li~~~~l 153 (223)
.++.|+|. |++|+.+++.+...|++ |..+++... ...+...+.+++++.. ..|++++++|. +.+...+ ++..
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~-~~~~~~v-~ea~ 91 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPA-PFAKDAV-FEAI 91 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHHH-HHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCH-HHHHHHH-HHHH
Confidence 45788898 99999999999999998 335565431 1134455789999988 89999999983 2333333 2333
Q ss_pred hcCCCCcEEEEcCCC-cccCHHHHHHHHHcCCce
Q 035615 154 AELGKGGMIINVGRG-ALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 154 ~~mk~ga~lIN~arg-~~vd~~al~~aL~~~~i~ 186 (223)
+ .+.. .+|..+.| ..-+++.|.++.++..+.
T Consensus 92 ~-~Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 92 D-AGIE-LIVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp H-TTCS-EEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred H-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 3 2222 24445544 224567888888876664
No 307
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=97.01 E-value=0.013 Score=52.12 Aligned_cols=104 Identities=15% Similarity=0.217 Sum_probs=71.1
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEE-EEcCCC-----CCCC-----------C-ccc-ccChhhhh-cCCcEE
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIIS-YNSRRK-----RPSV-----------L-FPY-CANVYDLA-VNSDVL 134 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~-----~~~~-----------~-~~~-~~~l~el~-~~aDiv 134 (223)
.+++|++|.|.|+|++|+.+|+.|...|++|+ +.|.+. .... + ... ..+-++++ ..||++
T Consensus 214 ~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DVl 293 (419)
T 3aoe_E 214 LDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEVL 293 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSEE
T ss_pred CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceEE
Confidence 35889999999999999999999999999987 444421 1000 0 000 11223443 379999
Q ss_pred EEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 135 VVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 135 ~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
+-|. +.+.|+.+..+.++- .+++.-+.+.+- .++ .+.|.++.+.
T Consensus 294 iP~A-----~~n~i~~~~A~~l~a-k~V~EgAN~p~t-~~A-~~~L~~~Gi~ 337 (419)
T 3aoe_E 294 VLAA-----REGALDGDRARQVQA-QAVVEVANFGLN-PEA-EAYLLGKGAL 337 (419)
T ss_dssp EECS-----CTTCBCHHHHTTCCC-SEEEECSTTCBC-HHH-HHHHHHHTCE
T ss_pred Eecc-----cccccccchHhhCCc-eEEEECCCCcCC-HHH-HHHHHHCCCE
Confidence 8775 356688888888854 588999999874 433 4667666665
No 308
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.01 E-value=0.00038 Score=60.42 Aligned_cols=63 Identities=17% Similarity=0.177 Sum_probs=48.1
Q ss_pred CEEEEEecChHHHH-HHHHHHhC-CCEEE-EEcCCCCCC----CCcccccChhhhhc--CCcEEEEeccCCh
Q 035615 80 MQVGIVRLGNIGSE-VLNRLQAF-GFIIS-YNSRRKRPS----VLFPYCANVYDLAV--NSDVLVVCCALTE 142 (223)
Q Consensus 80 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~----~~~~~~~~l~el~~--~aDiv~~~~p~t~ 142 (223)
.+|||||+|.||+. .++.++.. ++++. ++|+++... .+...+.+++++++ +.|+|++++|...
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGL 77 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHH
Confidence 58999999999997 67777765 77865 678775431 13345789999997 7899999999653
No 309
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=97.00 E-value=0.0019 Score=55.28 Aligned_cols=92 Identities=14% Similarity=0.106 Sum_probs=69.5
Q ss_pred ccCCCEEEEEec---ChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------C--cccccChhhhhcCCcEEEEeccC
Q 035615 76 KLGGMQVGIVRL---GNIGSEVLNRLQAFGFIISYNSRRKRPSV----------L--FPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 76 ~l~g~~vgIiG~---G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------~--~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
.+.|++|+++|= |++.++.+..+..+|++|.+..|..-... + +....+++|.++.+|+|..-.=-
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 378999999996 58999999999999999998877542211 1 12347899999999999875421
Q ss_pred C------hhh-----hhccCHHHHhcCCCCcEEEEcCC
Q 035615 141 T------EQT-----HHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 141 t------~~t-----~~li~~~~l~~mk~ga~lIN~ar 167 (223)
. ++- ..-++++.++.+|++++|.-+.-
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP 269 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLP 269 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCC
Confidence 1 111 24568899999999999998764
No 310
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.98 E-value=0.0055 Score=54.55 Aligned_cols=104 Identities=13% Similarity=0.200 Sum_probs=65.0
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEEE-cCCC----CC---CCC------------------c--ccccChhh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYN-SRRK----RP---SVL------------------F--PYCANVYD 126 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~-~~~~----~~---~~~------------------~--~~~~~l~e 126 (223)
.+++|++|.|.|+|++|+.+|+.|...|++|+.+ |.++ .. ..+ + ....+.++
T Consensus 208 ~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~~ 287 (421)
T 2yfq_A 208 IKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDEE 287 (421)
T ss_dssp CCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC--------------
T ss_pred CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCccc
Confidence 4689999999999999999999999999998854 4442 00 000 0 00112234
Q ss_pred hh-cCCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 127 LA-VNSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 127 l~-~~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
++ ..||+++-|.. .+.|+.+....++ ..+++-.+.+.+- .+ -.+.|+++.+.
T Consensus 288 ~~~~~~DIliP~A~-----~n~i~~~~A~~l~-ak~VvEgAN~P~t-~e-a~~il~~~GI~ 340 (421)
T 2yfq_A 288 FWTKEYDIIVPAAL-----ENVITGERAKTIN-AKLVCEAANGPTT-PE-GDKVLTERGIN 340 (421)
T ss_dssp -------CEEECSC-----SSCSCHHHHTTCC-CSEEECCSSSCSC-HH-HHHHHHHHTCE
T ss_pred hhcCCccEEEEcCC-----cCcCCcccHHHcC-CeEEEeCCccccC-HH-HHHHHHHCCCE
Confidence 43 36888877753 5568888888884 5788888888875 33 34556666654
No 311
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.95 E-value=0.0019 Score=54.92 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=67.6
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCCE-EEEEcCCC--CCCCCcccccChhhhhc--C-CcEEEEeccCChhhhhccCHH
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGFI-ISYNSRRK--RPSVLFPYCANVYDLAV--N-SDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~~-V~~~~~~~--~~~~~~~~~~~l~el~~--~-aDiv~~~~p~t~~t~~li~~~ 151 (223)
..++.|+|. |++|+.+++.+...|++ |..+++.. ....+...+.+++++.. . .|++++++|. +.+...+ ++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~-~~~~~~v-~e 90 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPA-PFAPDAV-YE 90 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCG-GGHHHHH-HH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCH-HHHHHHH-HH
Confidence 345777798 99999999999988998 34566543 12234555788999887 5 9999999984 3344443 23
Q ss_pred HHhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCce
Q 035615 152 VMAELGKGGMIINVGRGA-LIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 152 ~l~~mk~ga~lIN~arg~-~vd~~al~~aL~~~~i~ 186 (223)
..+ .... .+|.++.|= ..+++.|.++.++..+.
T Consensus 91 a~~-~Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 91 AVD-AGIR-LVVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp HHH-TTCS-EEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 332 2222 244455442 23466888888876664
No 312
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.94 E-value=0.0051 Score=52.59 Aligned_cols=98 Identities=12% Similarity=0.162 Sum_probs=71.0
Q ss_pred ccCCCEEEEEec---ChHHHHHHHHHHhC-CCEEEEEcCCCCCCC----------C--cccccChhhhhcCCcEEEEecc
Q 035615 76 KLGGMQVGIVRL---GNIGSEVLNRLQAF-GFIISYNSRRKRPSV----------L--FPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 76 ~l~g~~vgIiG~---G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~----------~--~~~~~~l~el~~~aDiv~~~~p 139 (223)
.+.|++|+++|= |++.++.+..+..+ |++|.+..|..-... + +....+++|.++.+|+|..-.=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 378999999996 69999999999999 999998876542211 1 1234789999999999987642
Q ss_pred CCh----h------hhhccCHHHHhcCCCCcEEEEcC-CCcccCH
Q 035615 140 LTE----Q------THHIINKDVMAELGKGGMIINVG-RGALIDE 173 (223)
Q Consensus 140 ~t~----~------t~~li~~~~l~~mk~ga~lIN~a-rg~~vd~ 173 (223)
-.+ + ...-++++.++.+|++++|.-+. ||.=|+.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~EI~~ 275 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIAT 275 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCSCCSSSBCH
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCCCCCeecH
Confidence 111 1 13557889999999999999877 4443433
No 313
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.94 E-value=0.0014 Score=52.79 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=49.9
Q ss_pred ccccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cc-cc-----ccChhhhhcCCcEEEEeccCC
Q 035615 74 GFKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LF-PY-----CANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 74 ~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~-~~-----~~~l~el~~~aDiv~~~~p~t 141 (223)
...+.||+|.|.|. |.||+.+++.|...|++|++.+|++.... +. .. ..++.+.+...|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 35689999999997 99999999999999999999998765321 11 10 145677888999999887643
No 314
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.94 E-value=0.0013 Score=52.46 Aligned_cols=62 Identities=16% Similarity=0.229 Sum_probs=48.3
Q ss_pred CEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCCC----------ccc-ccChhhhhcCCcEEEEeccCC
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSVL----------FPY-CANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~----------~~~-~~~l~el~~~aDiv~~~~p~t 141 (223)
++|.|.| .|.||+.+++.|...|++|++.+|++..... ... ..++.++++..|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 4789999 7999999999999999999999988654321 112 234567788999999888654
No 315
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.94 E-value=0.0013 Score=56.84 Aligned_cols=99 Identities=19% Similarity=0.227 Sum_probs=61.8
Q ss_pred CEEEEEecChHHHHHHHHHHhC---------CCEEE-EEcCCCCCCCCc---ccccChhhhhcCCcEEEEeccCChhhhh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF---------GFIIS-YNSRRKRPSVLF---PYCANVYDLAVNSDVLVVCCALTEQTHH 146 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~---------G~~V~-~~~~~~~~~~~~---~~~~~l~el~~~aDiv~~~~p~t~~t~~ 146 (223)
.+|||||+|.||+.+++.++.. +++|. +++++..+..+. ..+.++++++ +.|+|+.++|.......
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~~ 82 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVEAPLR 82 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcHHHHH
Confidence 4799999999999999988765 45654 567765443322 2356888888 99999999985422121
Q ss_pred ccCHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcC
Q 035615 147 IINKDVMAELGKGGMIINVGRGAL-IDEKEMLQFLVQG 183 (223)
Q Consensus 147 li~~~~l~~mk~ga~lIN~arg~~-vd~~al~~aL~~~ 183 (223)
. ..+.|+.|.-+|...-..+ -.-+.|.++.+++
T Consensus 83 ~----~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 83 L----VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H----HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H----HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 1 1223445555555322222 2445666666555
No 316
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.93 E-value=0.0024 Score=55.15 Aligned_cols=92 Identities=10% Similarity=0.038 Sum_probs=70.4
Q ss_pred ccCCCEEEEEecC--hHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEe
Q 035615 76 KLGGMQVGIVRLG--NIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~ 137 (223)
.+.|.+|+++|=| ++.++++..+..+|++|.+..|..-... + .....++++.++.+|+|..-
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD 231 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeC
Confidence 4889999999975 9999999999999999998877532211 1 22367899999999999884
Q ss_pred ccC-----C---hh-----hhhccCHHHHhcC-CCCcEEEEcCC
Q 035615 138 CAL-----T---EQ-----THHIINKDVMAEL-GKGGMIINVGR 167 (223)
Q Consensus 138 ~p~-----t---~~-----t~~li~~~~l~~m-k~ga~lIN~ar 167 (223)
.=. . ++ ...-++.+.++.+ |++++|.-+.-
T Consensus 232 ~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (333)
T 1duv_G 232 VWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLP 275 (333)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred CccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCC
Confidence 420 0 11 1356799999999 99999998875
No 317
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.93 E-value=0.0016 Score=51.41 Aligned_cols=89 Identities=16% Similarity=0.241 Sum_probs=57.8
Q ss_pred CEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC----Cccc-ccCh----hhhhcCCcEEEEeccCChhhhh---
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPY-CANV----YDLAVNSDVLVVCCALTEQTHH--- 146 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~-~~~l----~el~~~aDiv~~~~p~t~~t~~--- 146 (223)
++|.|.| .|.||+.+++.|...|++|.+.+|++.... .... ..++ .+.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 5799999 599999999999999999999998764321 1110 0111 1678899999988865432111
Q ss_pred ccCHHHHhcCCC--CcEEEEcCCC
Q 035615 147 IINKDVMAELGK--GGMIINVGRG 168 (223)
Q Consensus 147 li~~~~l~~mk~--ga~lIN~arg 168 (223)
......++.|++ ...+|++|..
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHhcCCceEEEEecc
Confidence 112345555554 3567777754
No 318
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.93 E-value=0.0015 Score=54.87 Aligned_cols=61 Identities=15% Similarity=0.235 Sum_probs=46.1
Q ss_pred CCEEEEEe-cChHHHHHHHHHHh-CCCEEE-EEcCCCCCCC------------CcccccChhhhhcCCcEEEEecc
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQA-FGFIIS-YNSRRKRPSV------------LFPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~-~G~~V~-~~~~~~~~~~------------~~~~~~~l~el~~~aDiv~~~~p 139 (223)
-.+|+|+| +|+||+.+++.+.. -++++. +++++..... +...+.++++++.++|+|+-+.+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~ 82 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL 82 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC
Confidence 36899999 89999999998875 477866 4787643211 23345789999999999988764
No 319
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.93 E-value=0.0012 Score=56.94 Aligned_cols=110 Identities=17% Similarity=0.200 Sum_probs=65.8
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC-------Cc-------ccccChhhhhcCCcEEEEeccCCh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV-------LF-------PYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~-------~~-------~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
.++|+|||.|.+|..++..+...+. ++..+|...++.+ .. ....+..+.++.||+|+++.+...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~ 88 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4799999999999999999876665 7999998653221 10 111244677999999999986432
Q ss_pred h---hh--------hccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHcCCceEE
Q 035615 143 Q---TH--------HIIN--KDVMAELGKGGMIINVGRGALIDEKEMLQF--LVQGDINGV 188 (223)
Q Consensus 143 ~---t~--------~li~--~~~l~~mk~ga~lIN~arg~~vd~~al~~a--L~~~~i~~a 188 (223)
. ++ .++. .+.+....|++++|+++.--=+....+.+. +...++.|.
T Consensus 89 k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 89 KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEc
Confidence 1 10 1110 122333468999999843222223333333 233355554
No 320
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.93 E-value=0.0027 Score=55.04 Aligned_cols=82 Identities=12% Similarity=0.052 Sum_probs=52.4
Q ss_pred CEEEEEe-cChHHHHHHHHHHhCC-CEEEEEcCCCCCCC----------C--cccccChhhhhcCCcEEEEeccCChhhh
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAFG-FIISYNSRRKRPSV----------L--FPYCANVYDLAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~~~~~~~~~----------~--~~~~~~l~el~~~aDiv~~~~p~t~~t~ 145 (223)
++|+|+| +|.||+.+.+.|.... +++..+.+...... + .....++++ +..+|+|+.|+|.... .
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s-~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVF-A 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHH-H
Confidence 5899999 8999999999998654 47665543322211 0 011223444 4789999999996532 2
Q ss_pred hccCHHHHhcCCCCcEEEEcCC
Q 035615 146 HIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~ar 167 (223)
... .. .++.|+.+|+.+-
T Consensus 83 ~~a-~~---~~~aG~~VId~Sa 100 (345)
T 2ozp_A 83 REF-DR---YSALAPVLVDLSA 100 (345)
T ss_dssp HTH-HH---HHTTCSEEEECSS
T ss_pred HHH-HH---HHHCCCEEEEcCc
Confidence 221 22 2467888998875
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.92 E-value=0.0013 Score=56.50 Aligned_cols=85 Identities=20% Similarity=0.218 Sum_probs=59.2
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc-ccChhhhhcCCcEEEEeccCChhhhhccCHH
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY-CANVYDLAVNSDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~-~~~l~el~~~aDiv~~~~p~t~~t~~li~~~ 151 (223)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++.+ ++.. ..+.+++.+..|+|+-++..... -..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~-----~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYD-----LKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCC-----HHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHH-----HHH
Confidence 488999999999999999999999999999988776532 2211 12333444478999888763311 134
Q ss_pred HHhcCCCCcEEEEcCC
Q 035615 152 VMAELGKGGMIINVGR 167 (223)
Q Consensus 152 ~l~~mk~ga~lIN~ar 167 (223)
.++.++++..++.++.
T Consensus 251 ~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 251 YLKLLTYNGDLALVGL 266 (348)
T ss_dssp HHTTEEEEEEEEECCC
T ss_pred HHHHHhcCCEEEEECC
Confidence 5566677777776654
No 322
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.91 E-value=0.0014 Score=56.18 Aligned_cols=90 Identities=16% Similarity=0.201 Sum_probs=60.0
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCC--CCCC---------------Cc-ccccChhhhhcCCcEEEEec
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRK--RPSV---------------LF-PYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~--~~~~---------------~~-~~~~~l~el~~~aDiv~~~~ 138 (223)
..++|+|||.|.||..+|..+...|. +|..+|+.+ .... .. ....+-.+.++.||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46899999999999999999998899 999999983 2111 00 01122246789999999997
Q ss_pred cCC--hh-hh-hcc--C----H---HHHhcCCCCcEEEEcCC
Q 035615 139 ALT--EQ-TH-HII--N----K---DVMAELGKGGMIINVGR 167 (223)
Q Consensus 139 p~t--~~-t~-~li--~----~---~~l~~mk~ga~lIN~ar 167 (223)
... |. ++ .++ | + +.+....|++++++++.
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 422 21 11 112 1 1 22333468899999984
No 323
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.91 E-value=0.003 Score=50.83 Aligned_cols=65 Identities=22% Similarity=0.219 Sum_probs=50.6
Q ss_pred cCCCEEEEEe-cChHHHHHHHHHHhCCC--EEEEEcCCCCCCCC------------cccccChhhhhcCCcEEEEeccCC
Q 035615 77 LGGMQVGIVR-LGNIGSEVLNRLQAFGF--IISYNSRRKRPSVL------------FPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 77 l~g~~vgIiG-~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~~------------~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
+.+|++.|.| .|.||+.+++.|...|+ +|++.+|++..... .....+++++++..|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5689999999 69999999999999999 99999887654321 111245667788999999887644
No 324
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.89 E-value=0.00067 Score=61.37 Aligned_cols=110 Identities=11% Similarity=0.061 Sum_probs=69.1
Q ss_pred CCEEEEEecChH-HHHHHHHHHhC-----CCEEEEEcCCCCCCC-----------------CcccccChhhhhcCCcEEE
Q 035615 79 GMQVGIVRLGNI-GSEVLNRLQAF-----GFIISYNSRRKRPSV-----------------LFPYCANVYDLAVNSDVLV 135 (223)
Q Consensus 79 g~~vgIiG~G~i-G~~~a~~l~~~-----G~~V~~~~~~~~~~~-----------------~~~~~~~l~el~~~aDiv~ 135 (223)
.++|+|||.|.. |.++|..|... +.+|..||+.++..+ ......++++.++.||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 469999999998 66677655544 567999998764311 0112357778899999999
Q ss_pred EeccCChh---hh----------------------------hccC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 035615 136 VCCALTEQ---TH----------------------------HIIN--KDVMAELGKGGMIINVGRGALIDEKEMLQFLVQ 182 (223)
Q Consensus 136 ~~~p~t~~---t~----------------------------~li~--~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~ 182 (223)
+++|.... ++ .++. .+.+....|++++||++.---+-..++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99985321 11 0110 123444568999999987654444455444433
Q ss_pred CCceEE
Q 035615 183 GDINGV 188 (223)
Q Consensus 183 ~~i~~a 188 (223)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 355543
No 325
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.88 E-value=0.005 Score=52.02 Aligned_cols=105 Identities=11% Similarity=0.069 Sum_probs=73.8
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCC--CCCcccccChhhhhcCCcEEEEeccCCh----------hh
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRP--SVLFPYCANVYDLAVNSDVLVVCCALTE----------QT 144 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~--~~~~~~~~~l~el~~~aDiv~~~~p~t~----------~t 144 (223)
++|++|.++|........++.|...|++|.+....... ..+.....++.+.++++|+|+.-.|... .+
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCcccccccccC
Confidence 67899999999999999999999999999876432221 1122334556778889999987443221 12
Q ss_pred hhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 145 HHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
...++++.++.+++..+++ + . +|..++.+++.+.++.
T Consensus 85 ~~~~~~~~l~~~~~l~~i~-~---g-~~~~d~~~~~~~~gi~ 121 (300)
T 2rir_A 85 EVVLKQDHLDRTPAHCVIF-S---G-ISNAYLENIAAQAKRK 121 (300)
T ss_dssp CEECCHHHHHTSCTTCEEE-E---S-SCCHHHHHHHHHTTCC
T ss_pred CccchHHHHhhcCCCCEEE-E---e-cCCHHHHHHHHHCCCE
Confidence 3337888999999988877 3 2 3667766777777776
No 326
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.88 E-value=0.0044 Score=54.13 Aligned_cols=91 Identities=10% Similarity=0.107 Sum_probs=68.8
Q ss_pred cCCCEEEEEecC--hHHHHHHHHHHhCCCEEEEEcCCCCCC--C--------------C--cccccChhhhhcCCcEEEE
Q 035615 77 LGGMQVGIVRLG--NIGSEVLNRLQAFGFIISYNSRRKRPS--V--------------L--FPYCANVYDLAVNSDVLVV 136 (223)
Q Consensus 77 l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~--~--------------~--~~~~~~l~el~~~aDiv~~ 136 (223)
+.|++|+++|=+ ++.++.+..+..+|++|.+..|..-.. . + +....+++|.++.+|+|..
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVyt 257 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYT 257 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEe
Confidence 789999999976 789999999999999999887753221 1 1 2235789999999999987
Q ss_pred ec--cCCh--h---------hhhccCHHHHhcCCCCcEEEEcCC
Q 035615 137 CC--ALTE--Q---------THHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 137 ~~--p~t~--~---------t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
-+ ...+ + ...-++.+.++.+|++++|.-+.-
T Consensus 258 d~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcLP 301 (365)
T 4amu_A 258 DVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCLP 301 (365)
T ss_dssp CCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECSC
T ss_pred cccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCC
Confidence 42 1111 1 124579999999999999998874
No 327
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.88 E-value=0.00071 Score=58.18 Aligned_cols=62 Identities=15% Similarity=0.232 Sum_probs=46.2
Q ss_pred CEEEEEecChHHHH-HHHHHHhC-CCEEE-EEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccCC
Q 035615 80 MQVGIVRLGNIGSE-VLNRLQAF-GFIIS-YNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G~iG~~-~a~~l~~~-G~~V~-~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
.+|||||+|.||+. .+..++.. +++|. ++|++++... +. ..+.+++++++ +.|+|++++|..
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~ 97 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTS 97 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCc
Confidence 48999999999986 46677665 67865 6788765432 22 34689999985 479999999854
No 328
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.83 E-value=0.0011 Score=58.84 Aligned_cols=61 Identities=18% Similarity=0.220 Sum_probs=46.0
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------CcccccChhhhhcCCcEEEE
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------LFPYCANVYDLAVNSDVLVV 136 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------~~~~~~~l~el~~~aDiv~~ 136 (223)
-+.|++|+|+|-|.+|+.+++.++.+|++|+++|+.+.... .......+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 46899999999999999999999999999999987654311 01111234566678898874
No 329
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.82 E-value=0.00076 Score=60.23 Aligned_cols=63 Identities=19% Similarity=0.262 Sum_probs=48.9
Q ss_pred CCEEEEEec----ChHHHHHHHHHHhC--CCEE-EEEcCCCCCCC------Cc---ccccChhhhhc--CCcEEEEeccC
Q 035615 79 GMQVGIVRL----GNIGSEVLNRLQAF--GFII-SYNSRRKRPSV------LF---PYCANVYDLAV--NSDVLVVCCAL 140 (223)
Q Consensus 79 g~~vgIiG~----G~iG~~~a~~l~~~--G~~V-~~~~~~~~~~~------~~---~~~~~l~el~~--~aDiv~~~~p~ 140 (223)
-.+|||||+ |.||+..++.++.. ++++ .++|+++.... +. ..+.+++++++ +.|+|++++|.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 99 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCc
Confidence 358999999 99999999999887 7786 47787764321 22 24678999986 68999999984
Q ss_pred C
Q 035615 141 T 141 (223)
Q Consensus 141 t 141 (223)
.
T Consensus 100 ~ 100 (438)
T 3btv_A 100 A 100 (438)
T ss_dssp H
T ss_pred H
Confidence 3
No 330
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.81 E-value=0.003 Score=56.72 Aligned_cols=97 Identities=18% Similarity=0.229 Sum_probs=69.1
Q ss_pred cccCCCEEEEEecC----------hHHHHHHHHHHhCCCEEEEEcCCCCCC-----CCcccccChhhhhcCCcEEEEecc
Q 035615 75 FKLGGMQVGIVRLG----------NIGSEVLNRLQAFGFIISYNSRRKRPS-----VLFPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 75 ~~l~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~el~~~aDiv~~~~p 139 (223)
..+.|++|+|+|+- .-...+++.|...|++|.+|||.-... .+.....++++.++.+|.|++++.
T Consensus 318 ~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~ 397 (446)
T 4a7p_A 318 GDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVTE 397 (446)
T ss_dssp SCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECSC
T ss_pred ccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEeeC
Confidence 45889999999986 667899999999999999999876321 123345678899999999999987
Q ss_pred CChhhhhccCHHH-HhcCCCCcEEEEcCCCcccCHHHH
Q 035615 140 LTEQTHHIINKDV-MAELGKGGMIINVGRGALIDEKEM 176 (223)
Q Consensus 140 ~t~~t~~li~~~~-l~~mk~ga~lIN~arg~~vd~~al 176 (223)
..+ -+. ++-+. .+.|+. .+++|+ |+- .|.+.+
T Consensus 398 ~~~-f~~-~d~~~~~~~~~~-~~i~D~-r~~-~~~~~~ 430 (446)
T 4a7p_A 398 WDA-FRA-LDLTRIKNSLKS-PVLVDL-RNI-YPPAEL 430 (446)
T ss_dssp CTT-TTS-CCHHHHHTTBSS-CBEECS-SCC-SCHHHH
T ss_pred CHH-hhc-CCHHHHHHhcCC-CEEEEC-CCC-CCHHHH
Confidence 543 222 44444 445664 578884 554 455544
No 331
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.80 E-value=0.005 Score=52.89 Aligned_cols=92 Identities=11% Similarity=0.105 Sum_probs=69.2
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------------CcccccChhhhhcCCcEEEEec
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV----------------LFPYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~~~~~~~l~el~~~aDiv~~~~ 138 (223)
.+.|.+|++||= .++.++.+..+..+|++|.+..|..-... .+....+++|.++.+|+|..-+
T Consensus 152 ~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 231 (321)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEec
Confidence 478999999996 46888888888899999998887543211 1233678999999999998843
Q ss_pred ----cCChh--------hhhccCHHHHhcCCCCcEEEEcCC
Q 035615 139 ----ALTEQ--------THHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 139 ----p~t~~--------t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
....+ ...-++++.++.+|++++|.-+.-
T Consensus 232 w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP 272 (321)
T 1oth_A 232 WISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLP 272 (321)
T ss_dssp SSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSC
T ss_pred cccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCC
Confidence 11111 114579999999999999999875
No 332
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.79 E-value=0.01 Score=53.20 Aligned_cols=105 Identities=17% Similarity=0.124 Sum_probs=69.5
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEE-EEcCCC-------C--------------C---CCCc------ccccC
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIIS-YNSRRK-------R--------------P---SVLF------PYCAN 123 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~-------~--------------~---~~~~------~~~~~ 123 (223)
.+++|+||.|-|+|++|+..|+.|...|.+|+ +.|.+. - . ...+ ..+.+
T Consensus 235 ~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~ 314 (456)
T 3r3j_A 235 DNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFE 314 (456)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEEC
T ss_pred CCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeC
Confidence 45899999999999999999999999999976 444321 0 0 0000 01112
Q ss_pred hhhhh-cCCcEEEEeccCChhhhhccCHHHHhcCC--CCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 124 VYDLA-VNSDVLVVCCALTEQTHHIINKDVMAELG--KGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 124 l~el~-~~aDiv~~~~p~t~~t~~li~~~~l~~mk--~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
.++++ ..||+++-|. +.+.|+.+..+.+. .-.+++-.+.+.+-.+ | .+.|.++.|.
T Consensus 315 ~~~i~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~e-A-~~iL~~rGI~ 373 (456)
T 3r3j_A 315 NQKPWNIPCDIAFPCA-----TQNEINENDADLFIQNKCKMIVEGANMPTHIK-A-LHKLKQNNII 373 (456)
T ss_dssp SCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHHTCCEEECCSSSCBCTT-H-HHHHHTTTCE
T ss_pred CccccccCccEEEeCC-----CccchhhHHHHHHHhcCCeEEEecCCCCCCHH-H-HHHHHHCCCE
Confidence 23443 4689887765 36678888777762 2357788888886544 2 3677777765
No 333
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.78 E-value=0.0037 Score=52.98 Aligned_cols=84 Identities=13% Similarity=0.092 Sum_probs=54.5
Q ss_pred CEEEEEe-cChHHHHHHHHHHh-CCCEEE-EEcCCCCCC-------------CCcccccChhhhhcCCcEEEEeccCChh
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQA-FGFIIS-YNSRRKRPS-------------VLFPYCANVYDLAVNSDVLVVCCALTEQ 143 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~-~G~~V~-~~~~~~~~~-------------~~~~~~~~l~el~~~aDiv~~~~p~t~~ 143 (223)
.+|+|+| +|+||+.+++.+.. -++++. ++++..... .+...+.++++++.++|+|+-..+ .+.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~-p~a 100 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ-PQA 100 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC-HHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC-HHH
Confidence 5899999 99999999998864 478855 567764321 123345789999999999986653 112
Q ss_pred hhhccCHHHHhcCCCCcEEEEcCCC
Q 035615 144 THHIINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 144 t~~li~~~~l~~mk~ga~lIN~arg 168 (223)
+... ....++.|.-+|-...|
T Consensus 101 ~~~~----~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 101 SVLY----ANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp HHHH----HHHHHHHTCEEEECCCC
T ss_pred HHHH----HHHHHHcCCCEEEECCC
Confidence 2221 11223445556655555
No 334
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.78 E-value=0.0063 Score=52.44 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=72.5
Q ss_pred ccCCCEEEEEecC--hHHHHHHHHHHhCCCEEEEEcCCCCC--C----------------CC--cccccChhhhhcCCcE
Q 035615 76 KLGGMQVGIVRLG--NIGSEVLNRLQAFGFIISYNSRRKRP--S----------------VL--FPYCANVYDLAVNSDV 133 (223)
Q Consensus 76 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~--~----------------~~--~~~~~~l~el~~~aDi 133 (223)
.+.|++|+++|=+ ++.++.+..+..+|++|.+..|..-. . .+ +....+++|.++.+|+
T Consensus 158 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 158 GFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp TGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred ccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 5889999999964 89999999999999999988775432 1 11 2235789999999999
Q ss_pred EEEe----cc-CCh--------hhhhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 134 LVVC----CA-LTE--------QTHHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 134 v~~~----~p-~t~--------~t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
|..- +. -.+ ....-++++.++.+|++++|.-+. ||.=|+.+
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~e 294 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTAS 294 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHH
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCHH
Confidence 9863 22 000 123557999999999999999887 56555543
No 335
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.77 E-value=0.0022 Score=54.69 Aligned_cols=86 Identities=12% Similarity=0.184 Sum_probs=56.2
Q ss_pred EEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCCC-----------------cccccChhhhhcCCcEEEEeccCCh
Q 035615 81 QVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSVL-----------------FPYCANVYDLAVNSDVLVVCCALTE 142 (223)
Q Consensus 81 ~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~el~~~aDiv~~~~p~t~ 142 (223)
+|+|||.|.+|..++..+...|+ +|..+|+..+...+ .....+. +.++.||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999998876677 69999987653221 0111344 67899999999965432
Q ss_pred h-----------hhhccC--HHHHhcCCCCcEEEEcCC
Q 035615 143 Q-----------THHIIN--KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 143 ~-----------t~~li~--~~~l~~mk~ga~lIN~ar 167 (223)
. +..++. .+.+....|++++|+++.
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 1 111110 112333358899999854
No 336
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.77 E-value=0.0088 Score=53.22 Aligned_cols=104 Identities=14% Similarity=0.188 Sum_probs=70.5
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEE-EcCCC-----C--CC--------C-Cc------------ccccChh
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISY-NSRRK-----R--PS--------V-LF------------PYCANVY 125 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~~~-----~--~~--------~-~~------------~~~~~l~ 125 (223)
.+++|++|.|.|+|++|+.+++.|...|.+|+. .|.+. . .. . +. ....+.+
T Consensus 206 ~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~ 285 (421)
T 1v9l_A 206 GGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPD 285 (421)
T ss_dssp SCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTT
T ss_pred CCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCch
Confidence 468999999999999999999999999999874 34321 0 00 0 10 1111334
Q ss_pred hhhc-CCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 126 DLAV-NSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 126 el~~-~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
+++. .||+++-|. +.+.|+.+..+.++- .+++--+.+.+- .++ .+.|.++.+.
T Consensus 286 ~~~~~~~Dil~P~A-----~~~~I~~~~a~~l~a-k~V~EgAN~p~t-~~a-~~~l~~~Gi~ 339 (421)
T 1v9l_A 286 AIFKLDVDIFVPAA-----IENVIRGDNAGLVKA-RLVVEGANGPTT-PEA-ERILYERGVV 339 (421)
T ss_dssp GGGGCCCSEEEECS-----CSSCBCTTTTTTCCC-SEEECCSSSCBC-HHH-HHHHHTTTCE
T ss_pred hhhcCCccEEEecC-----cCCccchhhHHHcCc-eEEEecCCCcCC-HHH-HHHHHHCCCE
Confidence 5554 799988776 355677777777753 578888888864 333 4667777775
No 337
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.77 E-value=0.00083 Score=56.46 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=34.9
Q ss_pred cccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCC
Q 035615 75 FKLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKR 113 (223)
Q Consensus 75 ~~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~ 113 (223)
.++.|+++.|+| .|.+|+++++.|...|++|++.+|+..
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~ 154 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHH
Confidence 347899999999 999999999999999999999998753
No 338
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.76 E-value=0.0082 Score=53.63 Aligned_cols=88 Identities=8% Similarity=0.138 Sum_probs=65.2
Q ss_pred ccCCCEEEEEecC----------hHHHHHHHHHHhC-CCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhh
Q 035615 76 KLGGMQVGIVRLG----------NIGSEVLNRLQAF-GFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQT 144 (223)
Q Consensus 76 ~l~g~~vgIiG~G----------~iG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t 144 (223)
.+.|++|+|+|+- .-...+++.|... |++|.+|||.-... ....++++.++.+|.|++++...+ -
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~---~~~~~~~~~~~~ad~vvi~t~~~~-f 387 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD---FVEHDMSHAVKDASLVLILSDHSE-F 387 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT---TBCSTTHHHHTTCSEEEECSCCGG-G
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc---cccCCHHHHHhCCCEEEEecCCHH-H
Confidence 4789999999963 3468899999999 99999999876543 234678899999999999987543 2
Q ss_pred hhccCHHHHhcCCCCcEEEEcCCCcc
Q 035615 145 HHIINKDVMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~arg~~ 170 (223)
+. ++.+.++.|+ +.+++|. |+-+
T Consensus 388 ~~-~d~~~~~~~~-~~~i~D~-r~~~ 410 (431)
T 3ojo_A 388 KN-LSDSHFDKMK-HKVIFDT-KNVV 410 (431)
T ss_dssp TS-CCGGGGTTCS-SCEEEES-SCCC
T ss_pred hc-cCHHHHHhCC-CCEEEEC-CCCC
Confidence 22 3444456676 5688885 5543
No 339
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.76 E-value=0.0029 Score=53.57 Aligned_cols=67 Identities=13% Similarity=-0.013 Sum_probs=49.5
Q ss_pred ccccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-------Cc-------ccccChhhhhc--CCcEEEE
Q 035615 74 GFKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-------LF-------PYCANVYDLAV--NSDVLVV 136 (223)
Q Consensus 74 ~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------~~-------~~~~~l~el~~--~aDiv~~ 136 (223)
..++.+++|.|.|. |.||+.+++.|...|++|++.+|...... .. ....+++++++ ..|+|+.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 46789999999996 99999999999999999999988543211 11 11123556677 8899887
Q ss_pred eccC
Q 035615 137 CCAL 140 (223)
Q Consensus 137 ~~p~ 140 (223)
+...
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 7643
No 340
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.74 E-value=0.0017 Score=55.98 Aligned_cols=63 Identities=16% Similarity=0.180 Sum_probs=45.4
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------Cc------------------ccccChhhhhcCCcE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LF------------------PYCANVYDLAVNSDV 133 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~------------------~~~~~l~el~~~aDi 133 (223)
.+|||+|+|.||+.+++.+... ++++. +.|++++... ++ ....+.++++.+.|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 4899999999999999998865 56764 4566533211 10 123578888889999
Q ss_pred EEEeccCCh
Q 035615 134 LVVCCALTE 142 (223)
Q Consensus 134 v~~~~p~t~ 142 (223)
|+.|+|...
T Consensus 83 V~~aTp~~~ 91 (334)
T 2czc_A 83 IVDATPGGI 91 (334)
T ss_dssp EEECCSTTH
T ss_pred EEECCCccc
Confidence 999998553
No 341
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.73 E-value=0.0016 Score=52.81 Aligned_cols=63 Identities=19% Similarity=0.155 Sum_probs=45.3
Q ss_pred CCEEEEEecChHHHHHHHHH--HhCCCEEE-EEcCCCC-CCC-----Ccc--cccChhhhhcC--CcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRL--QAFGFIIS-YNSRRKR-PSV-----LFP--YCANVYDLAVN--SDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l--~~~G~~V~-~~~~~~~-~~~-----~~~--~~~~l~el~~~--aDiv~~~~p~t 141 (223)
.++++|+|.|++|+++++.+ ...|+++. ++|.++. ... +.. ..+++++++++ .|++++++|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 46899999999999999973 45688865 6677665 321 221 24677888764 89999999854
No 342
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.72 E-value=0.0056 Score=52.17 Aligned_cols=36 Identities=19% Similarity=-0.083 Sum_probs=30.8
Q ss_pred cCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCC
Q 035615 77 LGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRK 112 (223)
Q Consensus 77 l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~ 112 (223)
...++|.|.|. |.||+.+++.|...|++|.+.+|+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34678999997 9999999999999999999998876
No 343
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.72 E-value=0.00097 Score=57.83 Aligned_cols=88 Identities=23% Similarity=0.302 Sum_probs=61.3
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCC---CCCC-----Ccccc-c-Chhhhh----cCCcEEEEeccCC
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRK---RPSV-----LFPYC-A-NVYDLA----VNSDVLVVCCALT 141 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~---~~~~-----~~~~~-~-~l~el~----~~aDiv~~~~p~t 141 (223)
.+.|++|.|+|.|.||..+++.++.+|++|++.+++. ++.+ ++... . ++.+.+ ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 4679999999999999999999999999999998876 3321 22111 0 111111 3589999888743
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
+.. + +..++.|+++..+|+++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 222 0 345677888888888874
No 344
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=96.72 E-value=0.0036 Score=54.68 Aligned_cols=92 Identities=12% Similarity=0.170 Sum_probs=65.0
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHHHHhc--C
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKDVMAE--L 156 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~~l~~--m 156 (223)
-.++.|+|.|.+++++++.++.+|++|.++|+.+... + .+-+..+|-++..-| .+.+.. +
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~-------~-~~~fp~a~~v~~~~p----------~~~~~~~~~ 260 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQC-------E-KHFFPDADEIIVDFP----------ADFLRKFLI 260 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGG-------C-GGGCTTCSEEEESCH----------HHHHHHSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcccc-------c-cccCCCceEEecCCH----------HHHHhhcCC
Confidence 3579999999999999999999999999998765421 1 122455665554433 122233 5
Q ss_pred CCCcEEEEcCCCcccCHHHHHHHHHcCCceEEE
Q 035615 157 GKGGMIINVGRGALIDEKEMLQFLVQGDINGVG 189 (223)
Q Consensus 157 k~ga~lIN~arg~~vd~~al~~aL~~~~i~~a~ 189 (223)
.+++.+|=+.++.-.|...|..+|+. ...+.+
T Consensus 261 ~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG 292 (362)
T 3on5_A 261 RPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIG 292 (362)
T ss_dssp CTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEE
T ss_pred CCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEE
Confidence 67788888888888888888888876 344333
No 345
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.72 E-value=0.0016 Score=56.25 Aligned_cols=87 Identities=25% Similarity=0.227 Sum_probs=59.3
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc---c--c-Chhh-hhcCCcEEEEeccCChhhh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY---C--A-NVYD-LAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~---~--~-~l~e-l~~~aDiv~~~~p~t~~t~ 145 (223)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++.+ ++.. . . ++.+ +....|+|+-+++.++ .
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--~ 256 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--D 256 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc--H
Confidence 488999999999999999999999999999988766532 2211 1 1 2222 2246899999887521 1
Q ss_pred hccCHHHHhcCCCCcEEEEcCC
Q 035615 146 HIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~ar 167 (223)
..+ ...++.++++..++.++.
T Consensus 257 ~~~-~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 257 IDF-NIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CCT-TTGGGGEEEEEEEEECCC
T ss_pred HHH-HHHHHHhcCCCEEEEecC
Confidence 112 345566777777777653
No 346
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.71 E-value=0.0037 Score=54.17 Aligned_cols=65 Identities=18% Similarity=0.253 Sum_probs=46.3
Q ss_pred CCcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCC
Q 035615 33 ADLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRR 111 (223)
Q Consensus 33 ~~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~ 111 (223)
..+...||-++-+=|-+.|. ..|... -...|++++|.|||.|.+|..+|+.|...|. ++..+|+.
T Consensus 2 ~~p~~~~~~~~~lnl~lm~w----------Rll~~~----g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 2 SDPLKIADQSVDLNLKLMKW----------RILPDL----NLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp -CHHHHHHHHHHHHHHHHHH----------HTCTTC----CHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHHHHH----------hhcchh----hHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 34456777777766655542 223221 1246899999999999999999999999998 57777764
No 347
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.71 E-value=0.0028 Score=50.29 Aligned_cols=89 Identities=11% Similarity=0.115 Sum_probs=57.6
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc-ccCh----hhhhcCCcEEEEeccCC--h---h
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY-CANV----YDLAVNSDVLVVCCALT--E---Q 143 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~-~~~l----~el~~~aDiv~~~~p~t--~---~ 143 (223)
++|.|.|. |.||+.+++.|...|++|++.+|++.... +... ..++ .+.+..+|+|+.+.... + .
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 47999996 99999999999999999999988754321 1110 0111 16788999999887542 1 1
Q ss_pred hhhccCHHHHhcCC-CCcEEEEcCCC
Q 035615 144 THHIINKDVMAELG-KGGMIINVGRG 168 (223)
Q Consensus 144 t~~li~~~~l~~mk-~ga~lIN~arg 168 (223)
..-......++.|+ .+..+|++|..
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 11111244555564 34678888753
No 348
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.71 E-value=0.00065 Score=59.55 Aligned_cols=62 Identities=13% Similarity=0.138 Sum_probs=48.4
Q ss_pred CEEEEEecC-hHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------CcccccChhhhhc--CCcEEEEeccCC
Q 035615 80 MQVGIVRLG-NIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LFPYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 80 ~~vgIiG~G-~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
.+|||||+| .+|+..++.+... ++++. ++|+++.... +...+.+++++++ +.|+|++++|..
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~ 75 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQ 75 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcH
Confidence 589999999 9999999998875 66765 6787764322 3445789999987 499999999854
No 349
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.69 E-value=0.0018 Score=55.32 Aligned_cols=88 Identities=17% Similarity=0.218 Sum_probs=57.0
Q ss_pred CEEEEEecChHHHHHHHHHHhCC--CEEEEEcCCCCCCC-------C-------cccccChhhhhcCCcEEEEeccCChh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFG--FIISYNSRRKRPSV-------L-------FPYCANVYDLAVNSDVLVVCCALTEQ 143 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G--~~V~~~~~~~~~~~-------~-------~~~~~~l~el~~~aDiv~~~~p~t~~ 143 (223)
++|+|||.|.+|..++..+...+ -++..+|...++.+ . .....+..+.++.||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 58999999999999999988766 47999998753221 1 01111335678999999999864321
Q ss_pred ---h--------hhccC--HHHHhcCCCCcEEEEcCC
Q 035615 144 ---T--------HHIIN--KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 144 ---t--------~~li~--~~~l~~mk~ga~lIN~ar 167 (223)
+ ..++. .+.+....|.+++|+++.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 1 11110 122333478999999844
No 350
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.69 E-value=0.0022 Score=55.78 Aligned_cols=83 Identities=13% Similarity=0.251 Sum_probs=51.3
Q ss_pred CEEEEEe-cChHHHHHHHHHHhCC-CEEEEEc--CCCCCCC-----C-c---------c--cc--cChhhhhc-CCcEEE
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAFG-FIISYNS--RRKRPSV-----L-F---------P--YC--ANVYDLAV-NSDVLV 135 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~~--~~~~~~~-----~-~---------~--~~--~~l~el~~-~aDiv~ 135 (223)
.+|+|+| +|.+|+.+++.|.... ++|.++. +...... + . . .+ .+.+++++ .+|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 5899999 9999999999997654 5776553 2221110 0 0 0 01 14455556 899999
Q ss_pred EeccCChhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 136 VCCALTEQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 136 ~~~p~t~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
+|+|... +.... ... ++.|..+|+.+-
T Consensus 89 ~atp~~~-~~~~a-~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDL-AKKFE-PEF---AKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHH-HHHHH-HHH---HHTTCEEEECCS
T ss_pred ECCCchH-HHHHH-HHH---HHCCCEEEECCc
Confidence 9998432 22221 222 356888998874
No 351
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.69 E-value=0.0019 Score=55.70 Aligned_cols=106 Identities=12% Similarity=0.158 Sum_probs=64.3
Q ss_pred CEEEEEecChHHHHHHHHHHhC--------CCEEE-EEcCCCCCCCC-c---------------cccc---Chhhhh-cC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF--------GFIIS-YNSRRKRPSVL-F---------------PYCA---NVYDLA-VN 130 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~--------G~~V~-~~~~~~~~~~~-~---------------~~~~---~l~el~-~~ 130 (223)
.+|||||+|.||+.+++.+... +++|. ++|++...... . ..+. ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 5799999999999999988653 35654 56766543221 1 0123 788877 46
Q ss_pred CcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCCce
Q 035615 131 SDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALI-DEKEMLQFLVQGDIN 186 (223)
Q Consensus 131 aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~v-d~~al~~aL~~~~i~ 186 (223)
.|+|+.++|.. .+...--+-..+.++.|.-+|...-..+. +-+.|.++.++++..
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~ 142 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRR 142 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCE
Confidence 89999999964 11111111233445667777765444432 345666666665543
No 352
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.69 E-value=0.0043 Score=54.05 Aligned_cols=92 Identities=15% Similarity=0.132 Sum_probs=70.3
Q ss_pred ccCCCEEEEEecC--hHHHHHHHHHHhCCCEEEEEcCCCCCCC--------------C--cccccChhhhhcCCcEEEEe
Q 035615 76 KLGGMQVGIVRLG--NIGSEVLNRLQAFGFIISYNSRRKRPSV--------------L--FPYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~g~~vgIiG~G--~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~el~~~aDiv~~~ 137 (223)
.+.|.+|+++|=| ++.++++..+..+|++|.+..|..-... + +....+++|.++.+|+|..-
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 252 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTD 252 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEc
Confidence 4789999999975 9999999999999999998876532211 1 22367899999999999874
Q ss_pred cc--CC---hh------hhhccCHHHHhcCC---CCcEEEEcCC
Q 035615 138 CA--LT---EQ------THHIINKDVMAELG---KGGMIINVGR 167 (223)
Q Consensus 138 ~p--~t---~~------t~~li~~~~l~~mk---~ga~lIN~ar 167 (223)
.= .. .. ...-++.+.++.+| ++++|.-+.-
T Consensus 253 ~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 253 VWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp CSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSC
T ss_pred ccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCC
Confidence 42 00 11 23567999999999 9999998875
No 353
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.69 E-value=0.00081 Score=59.29 Aligned_cols=62 Identities=10% Similarity=0.099 Sum_probs=46.5
Q ss_pred CEEEEEecChHHHHHHHHHHhC---------CCEEE-EEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF---------GFIIS-YNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCAL 140 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~---------G~~V~-~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~ 140 (223)
.+|||||+|.||+.-++.++.. +++|. ++|++++..+ +. ..+.+++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 4899999999999988887753 45654 6787765432 22 34689999986 57999999985
Q ss_pred C
Q 035615 141 T 141 (223)
Q Consensus 141 t 141 (223)
.
T Consensus 107 ~ 107 (412)
T 4gqa_A 107 H 107 (412)
T ss_dssp G
T ss_pred H
Confidence 4
No 354
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.68 E-value=0.0025 Score=54.15 Aligned_cols=67 Identities=13% Similarity=0.095 Sum_probs=46.7
Q ss_pred ccccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEeccC
Q 035615 74 GFKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 74 ~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
..++.+|+|.|.|. |.||+.+++.|...|++|++.+|...... +.....++.++++.+|+|+.+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 45688999999997 99999999999999999999988765411 111234466788899999877643
No 355
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.66 E-value=0.002 Score=57.71 Aligned_cols=110 Identities=11% Similarity=0.091 Sum_probs=71.0
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC---------CCcccc--cChhhhhcC-CcEEEEec--c-C
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS---------VLFPYC--ANVYDLAVN-SDVLVVCC--A-L 140 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~---------~~~~~~--~~l~el~~~-aDiv~~~~--p-~ 140 (223)
++.|++|.|||+|..|.++|+.|+..|++|.++|...... .+.... ...++++.. +|+|++.- | .
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 4789999999999999999999999999999999865311 122111 123346666 89998863 2 2
Q ss_pred Chhhh-------hccCH-HHHhcC-CCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 035615 141 TEQTH-------HIINK-DVMAEL-GKGGMIINVGRGALIDEKEMLQFLVQGDI 185 (223)
Q Consensus 141 t~~t~-------~li~~-~~l~~m-k~ga~lIN~arg~~vd~~al~~aL~~~~i 185 (223)
+|... .++.+ +++..+ +...+-|--+.|+.--..-+...|++...
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 22211 13443 344333 33334455557888777777788876544
No 356
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.63 E-value=0.0011 Score=57.05 Aligned_cols=63 Identities=19% Similarity=0.162 Sum_probs=48.6
Q ss_pred CCEEEEEecC-hHHHHHHHHHHhC--CCEE-EEEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccCC
Q 035615 79 GMQVGIVRLG-NIGSEVLNRLQAF--GFII-SYNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G-~iG~~~a~~l~~~--G~~V-~~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
-.+|||||+| .+|+..++.++.. ++++ .++|++++... +. ..+.+++++++ +.|+|++++|..
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 93 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCch
Confidence 4589999999 8999999999876 5676 57788765432 22 34688999986 589999999844
No 357
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.63 E-value=0.0031 Score=54.56 Aligned_cols=62 Identities=18% Similarity=0.179 Sum_probs=41.4
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC------Ccccc-----------------cChhhhhcCCcEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV------LFPYC-----------------ANVYDLAVNSDVL 134 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~------~~~~~-----------------~~l~el~~~aDiv 134 (223)
.+|||+|+|.||+.+++.+... ++++. +.++++.... +...+ .++++++.++|+|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 3799999999999999998764 56765 4565432210 11111 1334555679999
Q ss_pred EEeccCC
Q 035615 135 VVCCALT 141 (223)
Q Consensus 135 ~~~~p~t 141 (223)
+.|+|..
T Consensus 82 ~~aTp~~ 88 (340)
T 1b7g_O 82 VDTTPNG 88 (340)
T ss_dssp EECCSTT
T ss_pred EECCCCc
Confidence 9999854
No 358
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.62 E-value=0.0018 Score=56.31 Aligned_cols=85 Identities=19% Similarity=0.228 Sum_probs=58.7
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc---ccC---hhhhhcCCcEEEEeccCChhhhh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY---CAN---VYDLAVNSDVLVVCCALTEQTHH 146 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~---~~~---l~el~~~aDiv~~~~p~t~~t~~ 146 (223)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++.+ ++.. ..+ .+++....|+|+-++.....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH---
Confidence 488999999999999999999999999999887765432 2211 111 22333568999988863211
Q ss_pred ccCHHHHhcCCCCcEEEEcCC
Q 035615 147 IINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 147 li~~~~l~~mk~ga~lIN~ar 167 (223)
+ ...++.++++..++.++.
T Consensus 271 -~-~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 271 -L-DDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -H-HHHHTTEEEEEEEEECCC
T ss_pred -H-HHHHHHhccCCEEEEecc
Confidence 1 345666777777777664
No 359
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.62 E-value=0.00085 Score=56.52 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=36.6
Q ss_pred CCccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCC
Q 035615 72 PLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRK 112 (223)
Q Consensus 72 ~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~ 112 (223)
+...+++|++|.|||.|.+|...++.|...|++|.++++..
T Consensus 6 pl~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 6 QLAHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EEEECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred eEEEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 34567899999999999999999999999999999988654
No 360
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.61 E-value=0.00068 Score=58.69 Aligned_cols=62 Identities=16% Similarity=0.228 Sum_probs=42.5
Q ss_pred CEEEEEecChHHHHHHHHHHh-CCCEEEE-EcCCCCCCC-----C-------------------cccccChhhhhcCCcE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQA-FGFIISY-NSRRKRPSV-----L-------------------FPYCANVYDLAVNSDV 133 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~-~G~~V~~-~~~~~~~~~-----~-------------------~~~~~~l~el~~~aDi 133 (223)
.+|||+|+|.||+.+++.+.. -++++.+ .++.+.... . .....+.++++..+|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 479999999999999999876 4678654 454432110 0 0000245677789999
Q ss_pred EEEeccCC
Q 035615 134 LVVCCALT 141 (223)
Q Consensus 134 v~~~~p~t 141 (223)
|+.|+|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999855
No 361
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.60 E-value=0.019 Score=51.60 Aligned_cols=106 Identities=8% Similarity=0.020 Sum_probs=67.9
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCCEEEE-EcC-------CCC-----------------CCCCc------cccc
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISY-NSR-------RKR-----------------PSVLF------PYCA 122 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~-------~~~-----------------~~~~~------~~~~ 122 (223)
+.+++|+||.|-|+|++|+..|+.|...|.+|+. .|. ..- ...++ ..+.
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 3468999999999999999999999999999873 332 111 00000 0011
Q ss_pred Chhhhh-cCCcEEEEeccCChhhhhccCHHHHhcCC--CCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 123 NVYDLA-VNSDVLVVCCALTEQTHHIINKDVMAELG--KGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 123 ~l~el~-~~aDiv~~~~p~t~~t~~li~~~~l~~mk--~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
+.++++ ..||+++-|. +.+.|+.+..+.+. .-.+++--+.+.+ ..+| .+.|.++.+.
T Consensus 327 ~~~~~~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 327 PNEKPWGVPCTLAFPCA-----TQNDVDLDQAKLLQKNGCILVGEGANMPS-TVDA-INLFKSNNII 386 (470)
T ss_dssp SSCCTTSSCCSEEEECS-----STTCBCSHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred cCcCeeecCccEEEecc-----ccCcCCHHHHHHHHhcCcEEEEeCCCCCC-CHHH-HHHHHHCCcE
Confidence 112333 3788887765 35667776666661 1246777777775 4444 5777777775
No 362
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.60 E-value=0.0017 Score=56.40 Aligned_cols=64 Identities=11% Similarity=0.121 Sum_probs=47.7
Q ss_pred CCCEEEEEecChHHH-HHHHHHHhCCCEEE-EEcCCCCCCC------C-cccccChhhhhcC--CcEEEEeccCC
Q 035615 78 GGMQVGIVRLGNIGS-EVLNRLQAFGFIIS-YNSRRKRPSV------L-FPYCANVYDLAVN--SDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~-~~a~~l~~~G~~V~-~~~~~~~~~~------~-~~~~~~l~el~~~--aDiv~~~~p~t 141 (223)
+-.+|||||+|.+|. ..+..++.-++++. ++|++++... + ...+.++++++++ .|+|++++|..
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 99 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSS 99 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHH
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 346899999999995 56777777789864 6788765422 2 3457899999975 89999999843
No 363
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.56 E-value=0.0022 Score=55.33 Aligned_cols=91 Identities=9% Similarity=0.155 Sum_probs=60.1
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC--------C--c------ccccChhhhhcCCcEEEEe
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV--------L--F------PYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------~--~------~~~~~l~el~~~aDiv~~~ 137 (223)
....++|+|||.|.||..+|..+...|. ++..+|......+ . + ....+.+ .++.||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999999887777 8999998653211 0 0 1123444 58999999998
Q ss_pred ccCC--h-hhh-hccC---------HHHHhcCCCCcEEEEcCC
Q 035615 138 CALT--E-QTH-HIIN---------KDVMAELGKGGMIINVGR 167 (223)
Q Consensus 138 ~p~t--~-~t~-~li~---------~~~l~~mk~ga~lIN~ar 167 (223)
.... | .++ .++. .+.+....|++++++++.
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 6422 1 122 1221 123344578999999984
No 364
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.55 E-value=0.0016 Score=54.64 Aligned_cols=60 Identities=13% Similarity=0.160 Sum_probs=43.1
Q ss_pred CCEEEEEec-ChHHHHHHHHHH-hCCCEEE-EEcCCCCCC--C-----------CcccccChhhhhcCCcEEEEec
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQ-AFGFIIS-YNSRRKRPS--V-----------LFPYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~-~~G~~V~-~~~~~~~~~--~-----------~~~~~~~l~el~~~aDiv~~~~ 138 (223)
.++|+|+|+ |+||+.+++.+. .-|+++. ++++.+... . +.....++++++..+|+|+-+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 368999998 999999999876 4578865 677765321 0 1222467888888999999444
No 365
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.53 E-value=0.0014 Score=58.06 Aligned_cols=61 Identities=13% Similarity=0.111 Sum_probs=45.3
Q ss_pred CEEEEEecChHHHHHHHHHHhCC---CEEEEEcCCCCCCC------------Cc-------ccccChhhhhcC--CcEEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFG---FIISYNSRRKRPSV------------LF-------PYCANVYDLAVN--SDVLV 135 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G---~~V~~~~~~~~~~~------------~~-------~~~~~l~el~~~--aDiv~ 135 (223)
++|+|+|.|.||+.+++.|...| .+|.+++|+..+.. .. ....++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999887 38999988754321 01 112345667776 89999
Q ss_pred EeccC
Q 035615 136 VCCAL 140 (223)
Q Consensus 136 ~~~p~ 140 (223)
.++|.
T Consensus 82 n~ag~ 86 (405)
T 4ina_A 82 NIALP 86 (405)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 88873
No 366
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.51 E-value=0.0011 Score=58.18 Aligned_cols=64 Identities=9% Similarity=-0.021 Sum_probs=48.6
Q ss_pred CCCEEEEEecCh---HHHHHHHHHHhCC-CEEE--EEcCCCCCCC------Cc---ccccChhhhhcC-------CcEEE
Q 035615 78 GGMQVGIVRLGN---IGSEVLNRLQAFG-FIIS--YNSRRKRPSV------LF---PYCANVYDLAVN-------SDVLV 135 (223)
Q Consensus 78 ~g~~vgIiG~G~---iG~~~a~~l~~~G-~~V~--~~~~~~~~~~------~~---~~~~~l~el~~~-------aDiv~ 135 (223)
+-.+|||||+|. ||+..+..++..+ +++. ++|+++.... +. ..+.+++++++. .|+|+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 90 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS 90 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE
Confidence 346899999999 9999988887654 6765 4688765322 33 457899999864 89999
Q ss_pred EeccCC
Q 035615 136 VCCALT 141 (223)
Q Consensus 136 ~~~p~t 141 (223)
+++|..
T Consensus 91 i~tp~~ 96 (398)
T 3dty_A 91 IATPNG 96 (398)
T ss_dssp EESCGG
T ss_pred ECCCcH
Confidence 999854
No 367
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.50 E-value=0.012 Score=50.19 Aligned_cols=94 Identities=16% Similarity=0.160 Sum_probs=60.0
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCC--CEEEEEcCCCCCC------C---C--ccc---ccChhhhhcCCcEEEEeccCC-
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFG--FIISYNSRRKRPS------V---L--FPY---CANVYDLAVNSDVLVVCCALT- 141 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G--~~V~~~~~~~~~~------~---~--~~~---~~~l~el~~~aDiv~~~~p~t- 141 (223)
++|+|+|. |.+|..++..|...| .+|..+|+.+... . . ... ..++++.++.||+|+++.+..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 48999998 999999999998777 5889998875210 0 1 111 135777899999999997432
Q ss_pred -hh-hh-hcc--C----H---HHHhcCCCCcEEEEcCCCcccCHHH
Q 035615 142 -EQ-TH-HII--N----K---DVMAELGKGGMIINVGRGALIDEKE 175 (223)
Q Consensus 142 -~~-t~-~li--~----~---~~l~~mk~ga~lIN~arg~~vd~~a 175 (223)
+. ++ .++ | . +.+....|++++|+++ ..+|.-.
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s--NPv~~~~ 124 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS--NPVNSTI 124 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CCcchhH
Confidence 11 11 110 1 1 1223335789999974 4566543
No 368
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.50 E-value=0.006 Score=54.82 Aligned_cols=109 Identities=13% Similarity=0.079 Sum_probs=68.9
Q ss_pred CCEEEEEecChH-HHHHHHHHHh----C-CCEEEEEcCCC--CCCC---------------C--cccccChhhhhcCCcE
Q 035615 79 GMQVGIVRLGNI-GSEVLNRLQA----F-GFIISYNSRRK--RPSV---------------L--FPYCANVYDLAVNSDV 133 (223)
Q Consensus 79 g~~vgIiG~G~i-G~~~a~~l~~----~-G~~V~~~~~~~--~~~~---------------~--~~~~~~l~el~~~aDi 133 (223)
.++|+|||.|.. |.+++..|.. + +.+|..||+.+ +..+ . .....++.+.++.||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 468999999999 8887666554 3 55799999977 3211 1 1123577788999999
Q ss_pred EEEeccCChh---hh--------hc--------------------cC--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 035615 134 LVVCCALTEQ---TH--------HI--------------------IN--KDVMAELGKGGMIINVGRGALIDEKEMLQFL 180 (223)
Q Consensus 134 v~~~~p~t~~---t~--------~l--------------------i~--~~~l~~mk~ga~lIN~arg~~vd~~al~~aL 180 (223)
|++++|.... ++ ++ +. .+.+....|++++||++.---+-..++.+..
T Consensus 87 VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~ 166 (450)
T 1s6y_A 87 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYT 166 (450)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHC
T ss_pred EEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999985321 11 11 10 1234445689999999876645455555544
Q ss_pred HcCCceE
Q 035615 181 VQGDING 187 (223)
Q Consensus 181 ~~~~i~~ 187 (223)
...++.|
T Consensus 167 p~~rViG 173 (450)
T 1s6y_A 167 KQEKVVG 173 (450)
T ss_dssp CCCCEEE
T ss_pred CCCCEEE
Confidence 2334544
No 369
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.50 E-value=0.0021 Score=55.47 Aligned_cols=92 Identities=12% Similarity=0.103 Sum_probs=58.5
Q ss_pred CCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCC--------CC--------cccccChhhhhcCCcEEEEeccC
Q 035615 78 GGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPS--------VL--------FPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~--------~~--------~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
.+++|.|.| .|.||+.+++.|...|++|.+.+|++... .+ .....++.++++.+|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 367899999 59999999999998999999988876532 01 11122356678899999876643
Q ss_pred ChhhhhccCHHHHhcCCC-C--cEEEEcCCCc
Q 035615 141 TEQTHHIINKDVMAELGK-G--GMIINVGRGA 169 (223)
Q Consensus 141 t~~t~~li~~~~l~~mk~-g--a~lIN~arg~ 169 (223)
............++.++. + ..||++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 211111112333333322 3 4788887754
No 370
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.50 E-value=0.0019 Score=58.15 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=36.8
Q ss_pred CCccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCC
Q 035615 72 PLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRK 112 (223)
Q Consensus 72 ~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~ 112 (223)
+...+++|++|.|||.|.+|...++.|...|++|.++++..
T Consensus 5 P~~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 5 PIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp EEEECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred eeEEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 34567899999999999999999999999999999998754
No 371
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.49 E-value=0.0074 Score=50.17 Aligned_cols=34 Identities=18% Similarity=0.105 Sum_probs=30.6
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCC
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRK 112 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~ 112 (223)
+++|.|.|. |.||+.+++.|...|++|.+.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 578999995 9999999999998899999988875
No 372
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.49 E-value=0.007 Score=52.45 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=60.7
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc---c----cChhhhhc-----CCcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY---C----ANVYDLAV-----NSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~---~----~~l~el~~-----~aDiv~~~~p 139 (223)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. . .++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999999 7999987765432 2211 1 12333322 5899998886
Q ss_pred CChhhhhccCHHHHhcCCCC-cEEEEcCC
Q 035615 140 LTEQTHHIINKDVMAELGKG-GMIINVGR 167 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~g-a~lIN~ar 167 (223)
..+ + + ...++.++++ ..+|.++-
T Consensus 272 ~~~-~---~-~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NVG-V---M-RNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CHH-H---H-HHHHHTBCTTTCEEEECSC
T ss_pred CHH-H---H-HHHHHHhhcCCcEEEEEcC
Confidence 322 1 1 4567788998 88888874
No 373
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=96.48 E-value=0.0077 Score=50.45 Aligned_cols=40 Identities=25% Similarity=0.131 Sum_probs=34.9
Q ss_pred ccccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCC
Q 035615 74 GFKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKR 113 (223)
Q Consensus 74 ~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~ 113 (223)
..+++||++.|.|. |.||+.+|+.|...|++|++.+|+..
T Consensus 42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 82 (291)
T 3ijr_A 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE 82 (291)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 34689999999995 89999999999999999998887653
No 374
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.47 E-value=0.0012 Score=57.99 Aligned_cols=62 Identities=18% Similarity=0.141 Sum_probs=47.4
Q ss_pred CCEEEEEecChHHHHHHHHHHhC--CCEEE-EEcCCCCCCC------CcccccChhhhhcCCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF--GFIIS-YNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~--G~~V~-~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~p~t 141 (223)
-.+|||||.| +|+.-++.++.. ++++. +++++.+... +...+.++++++.+.|++++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 4689999999 799878777665 67865 6788765432 4445789999999999999999844
No 375
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.46 E-value=0.0019 Score=55.38 Aligned_cols=85 Identities=15% Similarity=0.160 Sum_probs=58.6
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc---c--cChhhh----hcCCcEEEEeccCChh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY---C--ANVYDL----AVNSDVLVVCCALTEQ 143 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~---~--~~l~el----~~~aDiv~~~~p~t~~ 143 (223)
.|++|.|+|.|.+|..+++.++.+|++|++.++++++.+ ++.. . .++.+. ....|+|+.++...+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 488999999999999999999999999999987754321 2111 1 122222 2468999988763222
Q ss_pred hhhccCHHHHhcCCCCcEEEEcCC
Q 035615 144 THHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 144 t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
. +..++.|+++..++.++.
T Consensus 244 ~-----~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 244 F-----QSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp H-----HHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHhhcCCEEEEecc
Confidence 1 445667788888887764
No 376
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.45 E-value=0.0071 Score=55.45 Aligned_cols=78 Identities=13% Similarity=0.027 Sum_probs=56.3
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcc--------cccChhhh-hcCCcEEEEeccCChhhhhccCH
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFP--------YCANVYDL-AVNSDVLVVCCALTEQTHHIINK 150 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~--------~~~~l~el-~~~aDiv~~~~p~t~~t~~li~~ 150 (223)
+++.|+|+|++|+.+|+.|...|.+|.+.|.+++...... ....|+++ ++++|.++++++..+ ..++-.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~--~ni~~~ 426 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDS--TNIFLT 426 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHH--HHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCch--HHHHHH
Confidence 7899999999999999999999999999998877644221 12223333 689999999987543 333334
Q ss_pred HHHhcCCCC
Q 035615 151 DVMAELGKG 159 (223)
Q Consensus 151 ~~l~~mk~g 159 (223)
...+.+.+.
T Consensus 427 ~~ak~l~~~ 435 (565)
T 4gx0_A 427 LACRHLHSH 435 (565)
T ss_dssp HHHHHHCSS
T ss_pred HHHHHHCCC
Confidence 555566665
No 377
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=96.45 E-value=0.016 Score=52.44 Aligned_cols=101 Identities=14% Similarity=0.191 Sum_probs=70.4
Q ss_pred ccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCC------CCC---------------C---cccccChhhhh-cC
Q 035615 76 KLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKR------PSV---------------L---FPYCANVYDLA-VN 130 (223)
Q Consensus 76 ~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~------~~~---------------~---~~~~~~l~el~-~~ 130 (223)
+|.|+||.|-|+|++|+..|+.|...|.+|+.++.+.. ... + ..... ++++ ..
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~--~~il~~~ 318 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE--GSILEVD 318 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC--SCGGGSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec--ccccccc
Confidence 58999999999999999999999999999876432211 000 0 01111 1333 47
Q ss_pred CcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 131 SDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 131 aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
||+++-|. +.+.|+.+....++ -.+++-.+.+.+ ..+| .+.|.++.|.
T Consensus 319 ~DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p~-T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 319 CDILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGPT-TPEA-DKIFLERNIM 366 (501)
T ss_dssp CSEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred ceEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCcC-CHHH-HHHHHHCCCE
Confidence 99887765 46778888888886 467888889984 5544 4677777765
No 378
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.45 E-value=0.0094 Score=49.55 Aligned_cols=61 Identities=18% Similarity=0.156 Sum_probs=44.4
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCC--------------CCc-------ccccChhhhhcCCcEEEE
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPS--------------VLF-------PYCANVYDLAVNSDVLVV 136 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~--------------~~~-------~~~~~l~el~~~aDiv~~ 136 (223)
.++|.|.|. |.+|+.+++.|...|++|.+.+|+.... .+. ....++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 478999995 9999999999999999999998875321 111 112345566777888877
Q ss_pred ecc
Q 035615 137 CCA 139 (223)
Q Consensus 137 ~~p 139 (223)
+.+
T Consensus 84 ~a~ 86 (308)
T 1qyc_A 84 TVG 86 (308)
T ss_dssp CCC
T ss_pred CCc
Confidence 664
No 379
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.44 E-value=0.0011 Score=57.24 Aligned_cols=63 Identities=10% Similarity=0.107 Sum_probs=45.5
Q ss_pred CCEEEEEecChHHHHHHHHHHhC--------CCEE-EEEcCCCCCCC------Cc-ccccChhhhhc--CCcEEEEeccC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAF--------GFII-SYNSRRKRPSV------LF-PYCANVYDLAV--NSDVLVVCCAL 140 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~--------G~~V-~~~~~~~~~~~------~~-~~~~~l~el~~--~aDiv~~~~p~ 140 (223)
..+|||||+|.||+.-++.++.. +++| .++|++++... +. ..+.+++++++ +.|+|++++|.
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~ 85 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPG 85 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCG
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 35899999999999887776543 2365 46787765432 22 34688999986 47999999985
Q ss_pred C
Q 035615 141 T 141 (223)
Q Consensus 141 t 141 (223)
.
T Consensus 86 ~ 86 (390)
T 4h3v_A 86 D 86 (390)
T ss_dssp G
T ss_pred H
Confidence 4
No 380
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.42 E-value=0.0088 Score=51.81 Aligned_cols=85 Identities=19% Similarity=0.230 Sum_probs=59.9
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc---c----cChhhhhc-----CCcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY---C----ANVYDLAV-----NSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~---~----~~l~el~~-----~aDiv~~~~p 139 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. + .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999999 7999987765432 2211 1 12333222 5899998886
Q ss_pred CChhhhhccCHHHHhcCCCC-cEEEEcCC
Q 035615 140 LTEQTHHIINKDVMAELGKG-GMIINVGR 167 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~g-a~lIN~ar 167 (223)
.. ++ + ...++.++++ ..++.++-
T Consensus 271 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RI-ET---M-MNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECCC
T ss_pred CH-HH---H-HHHHHHHhcCCCEEEEEcc
Confidence 32 21 1 4567788888 88888763
No 381
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=96.41 E-value=0.011 Score=49.13 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=33.8
Q ss_pred ccccCCCEEEEEec-Ch--HHHHHHHHHHhCCCEEEEEcCCC
Q 035615 74 GFKLGGMQVGIVRL-GN--IGSEVLNRLQAFGFIISYNSRRK 112 (223)
Q Consensus 74 ~~~l~g~~vgIiG~-G~--iG~~~a~~l~~~G~~V~~~~~~~ 112 (223)
...++||++.|.|. |. ||+++|+.|...|++|++.+|+.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 35689999999995 45 99999999999999999988875
No 382
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.39 E-value=0.0039 Score=53.52 Aligned_cols=85 Identities=13% Similarity=0.112 Sum_probs=58.8
Q ss_pred CCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc------ccChhhhhc-----CCcEEEEeccC
Q 035615 78 GGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY------CANVYDLAV-----NSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~------~~~l~el~~-----~aDiv~~~~p~ 140 (223)
.|++|.|+|. |.||+.+++.++..|++|++.+++++..+ +... ..++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4889999999 89999999999999999999887765321 1111 123333332 47999888753
Q ss_pred ChhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 141 TEQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 141 t~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
.+.. +..++.|+++..+|+++.
T Consensus 249 ~~~~-----~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 EAAI-----EASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHH-----HHHTTSEEEEEEEEECCC
T ss_pred HHHH-----HHHHHHHhcCCEEEEEeC
Confidence 2221 445667788888888764
No 383
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.39 E-value=0.0051 Score=50.86 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=46.4
Q ss_pred CEEEEEe-cChHHHHHHHHHHhC-CCEEEEEcCCCCCCC-----C-------cccccChhhhhcCCcEEEEeccC
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAF-GFIISYNSRRKRPSV-----L-------FPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~-----~-------~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
++|.|.| .|.||+.+++.|... |++|.+.+|++.... + .....++.++++.+|+|+.+.+.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4689999 599999999999987 999999988765432 1 11124466788999999887754
No 384
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.37 E-value=0.0096 Score=51.51 Aligned_cols=85 Identities=18% Similarity=0.207 Sum_probs=60.2
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc---c----cChhhhhc-----CCcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY---C----ANVYDLAV-----NSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~---~----~~l~el~~-----~aDiv~~~~p 139 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. . .++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999999 7999987765432 2211 1 12333222 5899998886
Q ss_pred CChhhhhccCHHHHhcCCCC-cEEEEcCC
Q 035615 140 LTEQTHHIINKDVMAELGKG-GMIINVGR 167 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~g-a~lIN~ar 167 (223)
..+ + + ...++.++++ ..++.++-
T Consensus 270 ~~~-~---~-~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVK-V---M-RAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHH-H---H-HHHHHTBCTTTCEEEECSC
T ss_pred cHH-H---H-HHHHHhhccCCcEEEEEec
Confidence 322 1 1 4567788998 88888763
No 385
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.37 E-value=0.012 Score=51.05 Aligned_cols=85 Identities=20% Similarity=0.142 Sum_probs=59.7
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc---c----cChhhhhc-----CCcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY---C----ANVYDLAV-----NSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~---~----~~l~el~~-----~aDiv~~~~p 139 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. . .++.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 48899999999999999999999999 7999987765432 2211 1 12333222 5899998875
Q ss_pred CChhhhhccCHHHHhcCCCC-cEEEEcCC
Q 035615 140 LTEQTHHIINKDVMAELGKG-GMIINVGR 167 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~g-a~lIN~ar 167 (223)
.. .+ + ...++.++++ ..++.++-
T Consensus 275 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TA-QT---L-KAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECCC
T ss_pred CH-HH---H-HHHHHHhhcCCCEEEEECC
Confidence 32 21 1 4567788888 88887763
No 386
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=96.36 E-value=0.0066 Score=52.11 Aligned_cols=62 Identities=15% Similarity=0.185 Sum_probs=45.7
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCC--CEEEEEcCCCCCC------C-C----ccc---ccChhhhhcCCcEEEEeccC
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFG--FIISYNSRRKRPS------V-L----FPY---CANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G--~~V~~~~~~~~~~------~-~----~~~---~~~l~el~~~aDiv~~~~p~ 140 (223)
.++|+|+| .|.+|..++..|...| .+|..+|+.+... . . ... ..++.+.++.+|+|+++.+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 46899999 8999999999998877 6788888655310 0 0 011 12566789999999999853
No 387
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.36 E-value=0.011 Score=51.31 Aligned_cols=85 Identities=16% Similarity=0.124 Sum_probs=59.9
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc---c----cChhhhhc-----CCcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY---C----ANVYDLAV-----NSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~---~----~~l~el~~-----~aDiv~~~~p 139 (223)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 48899999999999999999999999 7999987765432 2211 1 12333222 4799998886
Q ss_pred CChhhhhccCHHHHhcCCCC-cEEEEcCC
Q 035615 140 LTEQTHHIINKDVMAELGKG-GMIINVGR 167 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~g-a~lIN~ar 167 (223)
.. .+ + ...++.++++ ..++.++-
T Consensus 271 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RL-DT---M-VTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CH-HH---H-HHHHHHBCTTTCEEEECSC
T ss_pred CH-HH---H-HHHHHHhhcCCcEEEEecc
Confidence 32 21 1 4567778888 88888763
No 388
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.36 E-value=0.0078 Score=54.12 Aligned_cols=106 Identities=12% Similarity=0.194 Sum_probs=74.0
Q ss_pred cCCCEEEEEecC----hHHHHHHHHHHhCC-CEEEEEcCCCCCCCCcccccChhhhhcCCcEEEEeccCChhhhhccCHH
Q 035615 77 LGGMQVGIVRLG----NIGSEVLNRLQAFG-FIISYNSRRKRPSVLFPYCANVYDLAVNSDVLVVCCALTEQTHHIINKD 151 (223)
Q Consensus 77 l~g~~vgIiG~G----~iG~~~a~~l~~~G-~~V~~~~~~~~~~~~~~~~~~l~el~~~aDiv~~~~p~t~~t~~li~~~ 151 (223)
++-++|.|||.+ ++|+.+.+.++..| ..|+.+++......+...+.+++|+....|++++++|. +....++. +
T Consensus 6 ~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i~G~~~y~sl~~lp~~~Dlavi~vp~-~~~~~~v~-e 83 (457)
T 2csu_A 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPK-RFVKDTLI-Q 83 (457)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCH-HHHHHHHH-H
T ss_pred cCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeECCEeccCCHHHcCCCCCEEEEecCH-HHHHHHHH-H
Confidence 567899999998 89999999999884 77888888755445666678899988889999999983 34444443 3
Q ss_pred HHhcCCCCcEEEEcCCC--cccC-----HHHHHHHHHcCCce
Q 035615 152 VMAELGKGGMIINVGRG--ALID-----EKEMLQFLVQGDIN 186 (223)
Q Consensus 152 ~l~~mk~ga~lIN~arg--~~vd-----~~al~~aL~~~~i~ 186 (223)
..+. .... +|.++-| +.-+ ++.+.+..++..+.
T Consensus 84 ~~~~-Gi~~-vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~ 123 (457)
T 2csu_A 84 CGEK-GVKG-VVIITAGFGETGEEGKREEKELVEIAHKYGMR 123 (457)
T ss_dssp HHHH-TCCE-EEECCCSSTTSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHc-CCCE-EEEecCCCCccccccHHHHHHHHHHHHHcCCE
Confidence 3322 2223 4444433 2223 67788888877665
No 389
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.36 E-value=0.0075 Score=50.43 Aligned_cols=61 Identities=13% Similarity=0.174 Sum_probs=46.8
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC---------CcccccChhhhhcCCcEEEEeccC
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV---------LFPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
+++|.|.| .|.||+.+++.|...|++|++.+|++.... +.. ..++.++++.+|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 47899999 699999999999999999999988743221 122 34566788899999877643
No 390
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.34 E-value=0.0064 Score=52.94 Aligned_cols=30 Identities=23% Similarity=0.247 Sum_probs=25.3
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEEEEc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIISYNS 109 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~~ 109 (223)
.+|||+|+|.||+.+.+.|... .++|.+.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 4899999999999999998765 67876554
No 391
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=96.33 E-value=0.0047 Score=49.80 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=59.1
Q ss_pred CCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCC--------cccccChhhhh---------cCCcEEEEecc
Q 035615 78 GGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVL--------FPYCANVYDLA---------VNSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~--------~~~~~~l~el~---------~~aDiv~~~~p 139 (223)
++|++.|.|. |.||+.+++.|...|++|+..+|+...... .....++++++ ...|+|+.+.-
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 81 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG 81 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCc
Confidence 5789999984 899999999999999999999887654321 11112223333 36899988764
Q ss_pred CC-------hhh----hhcc----------CHHHHhcCCCCcEEEEcCCCc
Q 035615 140 LT-------EQT----HHII----------NKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 140 ~t-------~~t----~~li----------~~~~l~~mk~ga~lIN~arg~ 169 (223)
.. +.+ +.++ .+..+..|+++..|||++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 132 (236)
T 1ooe_A 82 GWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA 132 (236)
T ss_dssp CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred ccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 21 111 1111 234556676667899988643
No 392
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.32 E-value=0.0021 Score=56.99 Aligned_cols=63 Identities=11% Similarity=0.138 Sum_probs=47.2
Q ss_pred CCEEEEEecCh---HHHHHHHHHHhCC-CEEE--EEcCCCCCCC------Cc---ccccChhhhhcC-------CcEEEE
Q 035615 79 GMQVGIVRLGN---IGSEVLNRLQAFG-FIIS--YNSRRKRPSV------LF---PYCANVYDLAVN-------SDVLVV 136 (223)
Q Consensus 79 g~~vgIiG~G~---iG~~~a~~l~~~G-~~V~--~~~~~~~~~~------~~---~~~~~l~el~~~-------aDiv~~ 136 (223)
-.+|||||+|. ||+..+..++..+ ++++ ++|+++.... +. ..+.+++++++. .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 45899999999 9999888887665 6765 5687765422 23 356889999875 899999
Q ss_pred eccCC
Q 035615 137 CCALT 141 (223)
Q Consensus 137 ~~p~t 141 (223)
++|..
T Consensus 117 ~tp~~ 121 (417)
T 3v5n_A 117 VTPNH 121 (417)
T ss_dssp CSCTT
T ss_pred CCCcH
Confidence 99955
No 393
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=96.32 E-value=0.0044 Score=50.63 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=59.3
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc------ccccChhhhhc-------CCcEEEEeccCC
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVLF------PYCANVYDLAV-------NSDVLVVCCALT 141 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~------~~~~~l~el~~-------~aDiv~~~~p~t 141 (223)
+..+|++.|.|. |.||+.+|+.|...|++|++.+|+....... ....+++++++ .-|+|+.+....
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~ 98 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGW 98 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 345899999995 8899999999999999999999887654321 11122333332 459988876421
Q ss_pred -------hhh----hhc----------cCHHHHhcCCCCcEEEEcCCCc
Q 035615 142 -------EQT----HHI----------INKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 142 -------~~t----~~l----------i~~~~l~~mk~ga~lIN~arg~ 169 (223)
+.+ ..+ +.+..+..|+++..|||++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 99 SGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 111 011 1234556677777899988643
No 394
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.32 E-value=0.0069 Score=52.05 Aligned_cols=86 Identities=20% Similarity=0.226 Sum_probs=59.8
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc---c---cC-hhhh---h-----cCCcEEEEe
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY---C---AN-VYDL---A-----VNSDVLVVC 137 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~---~---~~-l~el---~-----~~aDiv~~~ 137 (223)
.|++|.|+|.|.+|...++.++.+|++|++.++++++.+ ++.. + .+ .+++ . ...|+|+.+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 488999999999999999999999999988887654321 2211 1 11 1222 2 258999988
Q ss_pred ccCChhhhhccCHHHHhcCCCCcEEEEcCCC
Q 035615 138 CALTEQTHHIINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 138 ~p~t~~t~~li~~~~l~~mk~ga~lIN~arg 168 (223)
+... .+ + ...++.++++..++.++..
T Consensus 248 ~g~~-~~---~-~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNE-KC---I-TIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCH-HH---H-HHHHHHSCTTCEEEECSCC
T ss_pred CCCH-HH---H-HHHHHHHhcCCEEEEEecC
Confidence 8632 11 1 4567788999999988743
No 395
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.31 E-value=0.0027 Score=54.80 Aligned_cols=85 Identities=19% Similarity=0.256 Sum_probs=59.5
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCC------CCccc---ccC---hhhhhcCCcEEEEeccCChhhh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPS------VLFPY---CAN---VYDLAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~------~~~~~---~~~---l~el~~~aDiv~~~~p~t~~t~ 145 (223)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++. .++.. ..+ +.++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 58999999999999999999999999999888776432 12211 122 22333468999988863211
Q ss_pred hccCHHHHhcCCCCcEEEEcCC
Q 035615 146 HIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~ar 167 (223)
-...++.++++..++.++-
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2445677788888887763
No 396
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.30 E-value=0.0033 Score=52.86 Aligned_cols=83 Identities=14% Similarity=0.193 Sum_probs=58.3
Q ss_pred CCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc---c---cChhhhhcCCcEEEEeccCChhhh
Q 035615 78 GGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY---C---ANVYDLAVNSDVLVVCCALTEQTH 145 (223)
Q Consensus 78 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~---~---~~l~el~~~aDiv~~~~p~t~~t~ 145 (223)
.|++|.|+|. |.+|..+++.++.+|++|++.++++++.+ ++.. . .++.+.+...|+++. +.. +.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~~-- 200 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-KE-- 200 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-TT--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-HH--
Confidence 4889999998 99999999999999999999988765432 2221 1 122233367899988 753 21
Q ss_pred hccCHHHHhcCCCCcEEEEcCC
Q 035615 146 HIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 146 ~li~~~~l~~mk~ga~lIN~ar 167 (223)
-...++.|+++..++.++.
T Consensus 201 ---~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 201 ---VEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp ---HHHHHTTEEEEEEEEEC--
T ss_pred ---HHHHHHhhccCCEEEEEeC
Confidence 2456778888888888763
No 397
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=96.30 E-value=0.004 Score=51.29 Aligned_cols=62 Identities=13% Similarity=0.118 Sum_probs=47.9
Q ss_pred CCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCCC---------cccccChhhhhcCCcEEEEecc
Q 035615 78 GGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSVL---------FPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~---------~~~~~~l~el~~~aDiv~~~~p 139 (223)
.+|+|.|.| .|.||+.+++.|...|++|+..+|+...... .....++.++++..|+|+.+..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence 468899999 6999999999999999999999988754321 1122345678889999987753
No 398
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.30 E-value=0.0055 Score=53.02 Aligned_cols=84 Identities=14% Similarity=0.197 Sum_probs=52.8
Q ss_pred CEEEEEe-cChHHHHHHHHHHhC-CCEEEEE-cCCC--CCCC----------Cc--cccc---ChhhhhcCCcEEEEecc
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAF-GFIISYN-SRRK--RPSV----------LF--PYCA---NVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~-G~~V~~~-~~~~--~~~~----------~~--~~~~---~l~el~~~aDiv~~~~p 139 (223)
.+|+|+| .|.+|+.+.+.|... .+++..+ +++. .... +. ..+. +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5899999 699999999999873 5576544 4431 1100 11 0111 34555589999999998
Q ss_pred CChhhhhccCHHHHhcCCCCcEEEEcCCC
Q 035615 140 LTEQTHHIINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~ga~lIN~arg 168 (223)
... +.... ++ .++.|+.+|+.|.-
T Consensus 85 ~~~-s~~~~-~~---~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 HEV-SHDLA-PQ---FLEAGCVVFDLSGA 108 (337)
T ss_dssp HHH-HHHHH-HH---HHHTTCEEEECSST
T ss_pred hHH-HHHHH-HH---HHHCCCEEEEcCCc
Confidence 432 22221 12 24678999998854
No 399
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.29 E-value=0.0047 Score=52.39 Aligned_cols=38 Identities=26% Similarity=0.316 Sum_probs=33.2
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCC
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRK 112 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~ 112 (223)
..|++++|.|||.|.+|..+++.|...|. ++..+|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 46899999999999999999999999897 677777654
No 400
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=96.29 E-value=0.034 Score=48.38 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=71.5
Q ss_pred cCCCE--EEEEec---C--hHHHHHHHHHHhCCCEEEEEcCC-CCCCC----------------CcccccChhhhhcCCc
Q 035615 77 LGGMQ--VGIVRL---G--NIGSEVLNRLQAFGFIISYNSRR-KRPSV----------------LFPYCANVYDLAVNSD 132 (223)
Q Consensus 77 l~g~~--vgIiG~---G--~iG~~~a~~l~~~G~~V~~~~~~-~~~~~----------------~~~~~~~l~el~~~aD 132 (223)
+.|++ |+++|= | ++.++.+..+..+|++|.+..|. .-... .+....+++|.++.+|
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aD 267 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGAD 267 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCS
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCC
Confidence 78999 999995 5 89999999999999999988876 21111 1123478999999999
Q ss_pred EEEEeccCC-----h----------hhhhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 133 VLVVCCALT-----E----------QTHHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 133 iv~~~~p~t-----~----------~t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
+|..-.=.. + .....++.+.++.+| +++|.-+. ||.=|+.+
T Consensus 268 vVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~e 326 (359)
T 1zq6_A 268 VVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCLPLRRNVKATDA 326 (359)
T ss_dssp EEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCSCCCBTTTBCHH
T ss_pred EEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECCCCCCCCceeCHH
Confidence 998765211 1 012457899999999 99999876 56555544
No 401
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.29 E-value=0.0025 Score=54.78 Aligned_cols=85 Identities=15% Similarity=0.107 Sum_probs=58.1
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc-----ccChhhhh------cCCcEEEEeccC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY-----CANVYDLA------VNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~-----~~~l~el~------~~aDiv~~~~p~ 140 (223)
.|++|.|+|.|.+|..+++.++.+|+ +|++.++++++.+ ++.. ..++.+.+ ...|+|+.+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68999999999999999999999999 8999988754321 2111 11222222 157999988863
Q ss_pred ChhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 141 TEQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 141 t~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
.+.. ...++.++++..++.++.
T Consensus 247 ~~~~-----~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PKAL-----EQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHHH-----HHHHHHEEEEEEEEECCC
T ss_pred HHHH-----HHHHHHHhcCCEEEEEcc
Confidence 2221 345566777777777764
No 402
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=96.29 E-value=0.016 Score=49.11 Aligned_cols=87 Identities=14% Similarity=0.100 Sum_probs=63.7
Q ss_pred ccCCCEEEEEec---ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEeccCChh----
Q 035615 76 KLGGMQVGIVRL---GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCALTEQ---- 143 (223)
Q Consensus 76 ~l~g~~vgIiG~---G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p~t~~---- 143 (223)
.+.|++|+++|= +++.++.+..+..+|++|.+..|..-... +.....+++|.++.+|+|.. +-..-+
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~q~er~~~ 221 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRLQKERQKE 221 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCCCTHHHHT
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCcccCcccc
Confidence 378999999995 89999999999999999998876542221 23346789999999999988 543211
Q ss_pred ----------hhhccCHHHHhcCCCCcEEEEcC
Q 035615 144 ----------THHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 144 ----------t~~li~~~~l~~mk~ga~lIN~a 166 (223)
...-++++.++.+| +|.-+.
T Consensus 222 ~~~~~~~~~~~~y~v~~~~l~~a~---i~mH~l 251 (291)
T 3d6n_B 222 NYIPSESSYFKQFGLTKERFEKVK---LYMHPG 251 (291)
T ss_dssp TSSSCHHHHHHHHSBCHHHHTTCC---CEECSS
T ss_pred ccchhHHHHHhhcCcCHHHHHhcc---cccCCC
Confidence 12345777777665 566554
No 403
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.28 E-value=0.0027 Score=55.09 Aligned_cols=63 Identities=13% Similarity=0.155 Sum_probs=47.7
Q ss_pred cCCCEEEEEec-ChHHHHHHHHHHhCCC--EEEEEcCCCCCCC--------------CcccccChhhhhcCCcEEEEecc
Q 035615 77 LGGMQVGIVRL-GNIGSEVLNRLQAFGF--IISYNSRRKRPSV--------------LFPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 77 l~g~~vgIiG~-G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~--------------~~~~~~~l~el~~~aDiv~~~~p 139 (223)
+.+++|+|||. |.+|+.+|..+..+|. +|..+|......+ ......+..+.++.||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 45789999998 9999999998888775 7999998643211 11123567788999999999863
No 404
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.28 E-value=0.0034 Score=56.31 Aligned_cols=103 Identities=11% Similarity=0.216 Sum_probs=63.5
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEE-EEcCCCCCCC-------C----------------------cccccChhhhh
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIIS-YNSRRKRPSV-------L----------------------FPYCANVYDLA 128 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~-------~----------------------~~~~~~l~el~ 128 (223)
.+|||||+|.||+.+++.+... ++++. ++|++++... + ...+.+.++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 5899999999999999888754 67754 6777764321 1 12357889998
Q ss_pred c--CCcEEEEeccCChhhhhccCHHHHhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCce
Q 035615 129 V--NSDVLVVCCALTEQTHHIINKDVMAELGKGGMIINVGRGA-LIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 129 ~--~aDiv~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~arg~-~vd~~al~~aL~~~~i~ 186 (223)
+ +.|+|+.++|.. .... +-.+..|+.|.-++...-.- ..+-+.|.++-++..+.
T Consensus 104 ~d~dIDaVviaTp~p-~~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 104 SNPLIDVIIDATGIP-EVGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp TCTTCCEEEECSCCH-HHHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCEEEEcCCCh-HHHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe
Confidence 7 589999999843 2211 12333455565555322111 12335666666665554
No 405
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.28 E-value=0.0027 Score=57.01 Aligned_cols=104 Identities=17% Similarity=0.284 Sum_probs=65.5
Q ss_pred CCEEEEEecChHHHHHHHHHHh----------CCCEEE-EEcCCCCCCC----CcccccChhhhhc--CCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQA----------FGFIIS-YNSRRKRPSV----LFPYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~----------~G~~V~-~~~~~~~~~~----~~~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
..+|||+|+|.||+.+++.+.. .+++|. +++++..... ....+.++++++. +.|+|+.++|..
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 4589999999999999987653 456654 5676653221 2345678999986 579999999853
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCCce
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVGRGALI-DEKEMLQFLVQGDIN 186 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~arg~~v-d~~al~~aL~~~~i~ 186 (223)
.....+ ..+.|+.|.-++..--+... +-+.|.++.++.+..
T Consensus 90 ~~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 90 EPAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp TTHHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 222222 23445566666654343222 235777777766554
No 406
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.26 E-value=0.0081 Score=51.38 Aligned_cols=107 Identities=14% Similarity=0.106 Sum_probs=69.3
Q ss_pred CCEEEEEecChHHHH-HHHHHHhCCCEEEEEcCCCCCC-------CCcccc--cChhhhh-cCCcEEEEec--c-CChhh
Q 035615 79 GMQVGIVRLGNIGSE-VLNRLQAFGFIISYNSRRKRPS-------VLFPYC--ANVYDLA-VNSDVLVVCC--A-LTEQT 144 (223)
Q Consensus 79 g~~vgIiG~G~iG~~-~a~~l~~~G~~V~~~~~~~~~~-------~~~~~~--~~l~el~-~~aDiv~~~~--p-~t~~t 144 (223)
.++|.|||.|.+|.+ +|+.|+..|++|.++|....+. .+.... .+.+++. ..+|+|+..- | .+|..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 578999999999996 9999999999999999865421 122111 2344555 5799998863 2 33332
Q ss_pred h-------hccCH-HHHhc--CCC-CcEEEEcCCCcccCHHHHHHHHHcCCc
Q 035615 145 H-------HIINK-DVMAE--LGK-GGMIINVGRGALIDEKEMLQFLVQGDI 185 (223)
Q Consensus 145 ~-------~li~~-~~l~~--mk~-ga~lIN~arg~~vd~~al~~aL~~~~i 185 (223)
. .++.+ +++.. ++. ..+-|--+.|+.--..-+...|++...
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~ 135 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGL 135 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 1 13333 33443 332 245566668888888888888887543
No 407
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.26 E-value=0.0042 Score=53.63 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=24.4
Q ss_pred CEEEEEecChHHHHHHHHHHhC---CCEEEEEc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF---GFIISYNS 109 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~---G~~V~~~~ 109 (223)
.+|||+|+|.||+.+.+.|... .++|.+++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain 33 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIN 33 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 4799999999999999998754 57876543
No 408
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.24 E-value=0.013 Score=52.76 Aligned_cols=92 Identities=12% Similarity=0.193 Sum_probs=65.3
Q ss_pred ccCCCEEEEEecCh----------HHHHHHHHHHhCCCEEEEEcCCCCCCC------------------CcccccChhhh
Q 035615 76 KLGGMQVGIVRLGN----------IGSEVLNRLQAFGFIISYNSRRKRPSV------------------LFPYCANVYDL 127 (223)
Q Consensus 76 ~l~g~~vgIiG~G~----------iG~~~a~~l~~~G~~V~~~~~~~~~~~------------------~~~~~~~l~el 127 (223)
.+.|++|+|+|+-- -...+++.|...|++|.+|||.-.... ......+..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 47899999999753 678899999999999999999743211 01123477888
Q ss_pred hcCCcEEEEeccCChhhhhccCHH-HHhcCCCCcEEEEcCCCcc
Q 035615 128 AVNSDVLVVCCALTEQTHHIINKD-VMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 128 ~~~aDiv~~~~p~t~~t~~li~~~-~l~~mk~ga~lIN~arg~~ 170 (223)
++.+|.|++++... +-+. ++.+ ....|+...+++|. |+-+
T Consensus 406 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~~~~i~D~-r~~~ 446 (467)
T 2q3e_A 406 CDGAHAVVICTEWD-MFKE-LDYERIHKKMLKPAFIFDG-RRVL 446 (467)
T ss_dssp HTTCSEEEECSCCG-GGGG-SCHHHHHHHSCSSCEEEES-SCTT
T ss_pred HhCCcEEEEecCCh-hhhc-CCHHHHHHhcCCCCEEEeC-CCcC
Confidence 99999999998754 3333 3444 44567766668875 5543
No 409
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=96.21 E-value=0.029 Score=48.20 Aligned_cols=97 Identities=6% Similarity=-0.034 Sum_probs=73.2
Q ss_pred cCCCEEEE-----EecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CcccccChhhhhcCCcEEEEecc--CCh--
Q 035615 77 LGGMQVGI-----VRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYCANVYDLAVNSDVLVVCCA--LTE-- 142 (223)
Q Consensus 77 l~g~~vgI-----iG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~el~~~aDiv~~~~p--~t~-- 142 (223)
+. .+|++ +|=+++.++.+..+..+|++|.+..|..-... .+....+++|.++.+|+|..-.= ...
T Consensus 167 l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~ 245 (324)
T 1js1_X 167 PK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDN 245 (324)
T ss_dssp CE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTC
T ss_pred ee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCcc
Confidence 66 89999 99999999999999999999998887553322 23446889999999999988432 011
Q ss_pred -------hhhhccCHHHHhcCCCCcEEEEcC---CCcccCHHH
Q 035615 143 -------QTHHIINKDVMAELGKGGMIINVG---RGALIDEKE 175 (223)
Q Consensus 143 -------~t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~a 175 (223)
.....++++.++.+| +++|.-+. ||.=|+.+-
T Consensus 246 ~~~~~~r~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~eV 287 (324)
T 1js1_X 246 YGQILSTDRNWTVGDRQMAVTN-NAYFMHCLPVRRNMIVTDDV 287 (324)
T ss_dssp TTCCCCCCTTSSBCHHHHTTSS-SCEEECCSCCCBTTTBCHHH
T ss_pred ccchHHHhcCcccCHHHHHhcC-CcEEECCCCCCCCcccCHHH
Confidence 123567999999999 99999887 455555443
No 410
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=96.21 E-value=0.004 Score=49.87 Aligned_cols=91 Identities=19% Similarity=0.118 Sum_probs=59.6
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhh---cCCcEEEEeccCC-h--------
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLA---VNSDVLVVCCALT-E-------- 142 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~---~~aDiv~~~~p~t-~-------- 142 (223)
.+.+|++.|.|. |.||+.+|+.|...|++|++.+|+... +.....++++++ ...|+++.+.... +
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~ 80 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGL--DISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVE 80 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTC--CTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCccc--CCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCC
Confidence 467999999995 899999999999999999999887641 121122333333 4679988776422 0
Q ss_pred -h-hhh----------ccCHHHHhcCCCCcEEEEcCCC
Q 035615 143 -Q-THH----------IINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 143 -~-t~~----------li~~~~l~~mk~ga~lIN~arg 168 (223)
+ -+. .+.+..+..|+++..+||++..
T Consensus 81 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 81 VTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred HHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 0 000 0123455677777889999864
No 411
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.19 E-value=0.013 Score=49.09 Aligned_cols=61 Identities=16% Similarity=0.159 Sum_probs=43.9
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCC---------CCcc-------cccChhhhhcCCcEEEEecc
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPS---------VLFP-------YCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~---------~~~~-------~~~~l~el~~~aDiv~~~~p 139 (223)
.++|.|.| .|.+|+.+++.|...|++|.+.+|++... .+.. ...++.++++.+|+|+.+.+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 35899999 59999999999999999999998876411 1111 12345566777887776664
No 412
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.19 E-value=0.017 Score=47.65 Aligned_cols=49 Identities=20% Similarity=0.341 Sum_probs=37.3
Q ss_pred CEEEEEec-ChHHHHHHHHHHhC-CCEEE-EEcCCCCCCCCcccccChhhhhc-CCcEEEEec
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAF-GFIIS-YNSRRKRPSVLFPYCANVYDLAV-NSDVLVVCC 138 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~-G~~V~-~~~~~~~~~~~~~~~~~l~el~~-~aDiv~~~~ 138 (223)
++|+|+|. |+||+.+++.+... ++++. ++++. .++++++. .+|+|+-+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~----------~dl~~~~~~~~DvvIDfT 53 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG----------DPLSLLTDGNTEVVIDFT 53 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT----------CCTHHHHHTTCCEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC----------CCHHHHhccCCcEEEEcc
Confidence 47999995 99999999998765 89976 55653 34666664 799888555
No 413
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.18 E-value=0.0067 Score=53.26 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=58.1
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc-----ccChhh----hh--cCCcEEEEeccC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY-----CANVYD----LA--VNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~-----~~~l~e----l~--~~aDiv~~~~p~ 140 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. ..++.+ +. ...|+|+-++..
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 58999999999999999999999999 8999987764422 2211 112222 22 258999988864
Q ss_pred ChhhhhccCHHHHhcC----CCCcEEEEcCC
Q 035615 141 TEQTHHIINKDVMAEL----GKGGMIINVGR 167 (223)
Q Consensus 141 t~~t~~li~~~~l~~m----k~ga~lIN~ar 167 (223)
...+. ...++.+ +++..++.++-
T Consensus 293 ~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 293 PQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred cHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 32222 2233344 88888888864
No 414
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.18 E-value=0.0073 Score=52.04 Aligned_cols=85 Identities=18% Similarity=0.218 Sum_probs=59.4
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc---cc-----Ch-hhhh----cCCcEEEEec
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY---CA-----NV-YDLA----VNSDVLVVCC 138 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~---~~-----~l-~el~----~~aDiv~~~~ 138 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. +. ++ +++. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 48899999999999999999999999 8999887654321 2211 11 11 1221 3589999888
Q ss_pred cCChhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 139 ALTEQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 139 p~t~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
... .+ + ...++.++++..++.++-
T Consensus 251 g~~-~~---~-~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GAE-AS---I-QAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCH-HH---H-HHHHHHSCTTCEEEECSC
T ss_pred CCh-HH---H-HHHHHHhcCCCEEEEEec
Confidence 632 11 1 456778899999998874
No 415
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=96.18 E-value=0.008 Score=48.64 Aligned_cols=93 Identities=12% Similarity=0.133 Sum_probs=59.4
Q ss_pred cCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCC--------cccccChhhhh---------cCCcEEEEec
Q 035615 77 LGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVL--------FPYCANVYDLA---------VNSDVLVVCC 138 (223)
Q Consensus 77 l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~--------~~~~~~l~el~---------~~aDiv~~~~ 138 (223)
.++|++.|.|. |.||+.+++.|...|++|++.+|+...... .....++++++ ...|+++.+.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~A 84 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA 84 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcc
Confidence 56899999994 899999999999999999999887654321 11112233333 3689998876
Q ss_pred cCC-------hhh----hhc----------cCHHHHhcCCCCcEEEEcCCCc
Q 035615 139 ALT-------EQT----HHI----------INKDVMAELGKGGMIINVGRGA 169 (223)
Q Consensus 139 p~t-------~~t----~~l----------i~~~~l~~mk~ga~lIN~arg~ 169 (223)
-.. +.+ +.. +.+..+..|+++..|||++...
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~ 136 (241)
T 1dhr_A 85 GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA 136 (241)
T ss_dssp CCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred cccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHH
Confidence 321 111 111 1133456676667899988643
No 416
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.16 E-value=0.0019 Score=58.16 Aligned_cols=62 Identities=16% Similarity=0.147 Sum_probs=46.5
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC------Cc-------ccccChhhh-hcCCcEEEEeccC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV------LF-------PYCANVYDL-AVNSDVLVVCCAL 140 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~-------~~~~~l~el-~~~aDiv~~~~p~ 140 (223)
.++|-|+|+|++|+.+|+.|...|++|++.|.+++... +. .....|+++ +++||+++.+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 57899999999999999999999999999998765321 11 112234444 6889998877653
No 417
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.16 E-value=0.012 Score=49.40 Aligned_cols=61 Identities=13% Similarity=0.065 Sum_probs=44.5
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCC-CC-------------CCCc-------ccccChhhhhcCCcEEEE
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRK-RP-------------SVLF-------PYCANVYDLAVNSDVLVV 136 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~-~~-------------~~~~-------~~~~~l~el~~~aDiv~~ 136 (223)
.++|.|.|. |.+|+.+++.|...|++|.+.+|++ .. ..+. ....++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 467999995 9999999999999999999998875 21 0111 112345667788888877
Q ss_pred ecc
Q 035615 137 CCA 139 (223)
Q Consensus 137 ~~p 139 (223)
+..
T Consensus 84 ~a~ 86 (321)
T 3c1o_A 84 ALP 86 (321)
T ss_dssp CCC
T ss_pred CCC
Confidence 665
No 418
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.16 E-value=0.0075 Score=52.08 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=24.5
Q ss_pred CEEEEEecChHHHHHHHHHHh-CCCEEEEEc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQA-FGFIISYNS 109 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~-~G~~V~~~~ 109 (223)
.+|||+|+|+||+.+++.+.. -+++|.+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~ 34 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIN 34 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEec
Confidence 489999999999999999865 467876543
No 419
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.15 E-value=0.0013 Score=51.67 Aligned_cols=85 Identities=19% Similarity=0.252 Sum_probs=55.5
Q ss_pred CCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc---c--cCh-hhh---h--cCCcEEEEeccC
Q 035615 78 GGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY---C--ANV-YDL---A--VNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~---~--~~l-~el---~--~~aDiv~~~~p~ 140 (223)
.|++|.|+| .|.||+.+++.++..|++|++.+++++..+ +... . .+. +++ . ...|+++.+..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 488999999 699999999999999999998887653221 1111 0 111 111 1 13688877653
Q ss_pred ChhhhhccCHHHHhcCCCCcEEEEcCCC
Q 035615 141 TEQTHHIINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 141 t~~t~~li~~~~l~~mk~ga~lIN~arg 168 (223)
. .+ -...++.|+++..+|+++..
T Consensus 117 ~-~~----~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 117 G-EA----IQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp T-HH----HHHHHHTEEEEEEEEECSCG
T ss_pred h-HH----HHHHHHHhccCCEEEEEcCC
Confidence 1 11 14566777888888887653
No 420
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=96.15 E-value=0.0091 Score=52.56 Aligned_cols=62 Identities=16% Similarity=0.223 Sum_probs=44.7
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----C--cc---c---ccChhhhhcCCcEEEE
Q 035615 74 GFKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----L--FP---Y---CANVYDLAVNSDVLVV 136 (223)
Q Consensus 74 ~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~--~~---~---~~~l~el~~~aDiv~~ 136 (223)
+....+++|+|+|-|..|+.+++.++.+|++|++++ .+.... . .. . ...+.++++.+|+|+.
T Consensus 19 ~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 19 GHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 344678999999999999999999999999998887 442211 1 11 1 1235567889998865
No 421
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=96.14 E-value=0.026 Score=48.13 Aligned_cols=92 Identities=18% Similarity=0.182 Sum_probs=66.5
Q ss_pred ccCCCEEEEEec---ChHHHHHHHHHHhC-CCEEEEEcCCCCCCC----------C--cccccChhhhhcCCcEEEEecc
Q 035615 76 KLGGMQVGIVRL---GNIGSEVLNRLQAF-GFIISYNSRRKRPSV----------L--FPYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 76 ~l~g~~vgIiG~---G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~----------~--~~~~~~l~el~~~aDiv~~~~p 139 (223)
.+.|+||++||= |++.++.+..+..+ |++|.+..|..-... + +....+++|.++.+|+|....-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~ 227 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRI 227 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCc
Confidence 478999999996 68999999999999 999998877532211 1 1235789999999999987531
Q ss_pred ------CChhh-----hhccCHHHHhcCCCCcEEEEcC-CCc
Q 035615 140 ------LTEQT-----HHIINKDVMAELGKGGMIINVG-RGA 169 (223)
Q Consensus 140 ------~t~~t-----~~li~~~~l~~mk~ga~lIN~a-rg~ 169 (223)
...+- ..-++.+.++. ++++|.-+. ||.
T Consensus 228 q~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~lPRg~ 267 (306)
T 4ekn_B 228 QKERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHPLPRVD 267 (306)
T ss_dssp CGGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECCSCCSS
T ss_pred ccccCCCHHHHHHhccCcEECHHHHcC--CCCEEECCCCCCC
Confidence 11111 24578888876 788888766 443
No 422
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.14 E-value=0.0088 Score=51.95 Aligned_cols=85 Identities=20% Similarity=0.205 Sum_probs=59.3
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc-------ccChhhhhc-----CCcEEEEecc
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY-------CANVYDLAV-----NSDVLVVCCA 139 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~-------~~~l~el~~-----~aDiv~~~~p 139 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. ..++.+.+. ..|+++-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 48899999999999999999999999 7999988776432 2211 122332222 4899998876
Q ss_pred CChhhhhccCHHHHhcCCCC-cEEEEcCC
Q 035615 140 LTEQTHHIINKDVMAELGKG-GMIINVGR 167 (223)
Q Consensus 140 ~t~~t~~li~~~~l~~mk~g-a~lIN~ar 167 (223)
.. .+ + ...++.++++ ..++.++-
T Consensus 273 ~~-~~---~-~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 NV-SV---M-RAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECSC
T ss_pred CH-HH---H-HHHHHHhhccCCEEEEEcc
Confidence 32 21 1 4566778885 78887763
No 423
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=96.14 E-value=0.013 Score=50.46 Aligned_cols=66 Identities=20% Similarity=0.150 Sum_probs=49.5
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCC-CEEEEEcCCCCCC-------CCcc-------cccChhhhhcCCcEEEEecc
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFG-FIISYNSRRKRPS-------VLFP-------YCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G-~~V~~~~~~~~~~-------~~~~-------~~~~l~el~~~aDiv~~~~p 139 (223)
.+++++|.|.|. |.||+.+++.|...| ++|++.+|..... .... ...+++++++.+|+|+.+..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 578999999995 999999999999999 9999998875432 1111 11235567789999987765
Q ss_pred CC
Q 035615 140 LT 141 (223)
Q Consensus 140 ~t 141 (223)
..
T Consensus 109 ~~ 110 (377)
T 2q1s_A 109 YH 110 (377)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 424
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.14 E-value=0.0068 Score=51.02 Aligned_cols=64 Identities=13% Similarity=0.072 Sum_probs=47.8
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCC------------C--------CcccccChhhhhcCCcEE
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPS------------V--------LFPYCANVYDLAVNSDVL 134 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~------------~--------~~~~~~~l~el~~~aDiv 134 (223)
.+.+++|.|.|. |.||+.+++.|...|++|++.+|+.... . +.....+++++++..|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 467999999996 9999999999999999999988763210 0 111123456677789999
Q ss_pred EEecc
Q 035615 135 VVCCA 139 (223)
Q Consensus 135 ~~~~p 139 (223)
+.+..
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 87764
No 425
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.13 E-value=0.011 Score=50.05 Aligned_cols=64 Identities=14% Similarity=0.050 Sum_probs=48.6
Q ss_pred ccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCC----------------CC-------cccccChhhhhcCC
Q 035615 76 KLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPS----------------VL-------FPYCANVYDLAVNS 131 (223)
Q Consensus 76 ~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------------~~-------~~~~~~l~el~~~a 131 (223)
.+.+++|.|.| .|.||+.+++.|...|++|++.+|..... .. .....++.++++.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 36789999999 59999999999999999999998865432 11 11123456778899
Q ss_pred cEEEEecc
Q 035615 132 DVLVVCCA 139 (223)
Q Consensus 132 Div~~~~p 139 (223)
|+|+.+..
T Consensus 102 d~Vih~A~ 109 (351)
T 3ruf_A 102 DHVLHQAA 109 (351)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99887764
No 426
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.13 E-value=0.011 Score=51.33 Aligned_cols=38 Identities=29% Similarity=0.262 Sum_probs=33.1
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCC
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRK 112 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~ 112 (223)
..|++++|.|||.|.+|..+++.|...|. ++..+|+..
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 46889999999999999999999999998 577777653
No 427
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.11 E-value=0.023 Score=49.33 Aligned_cols=83 Identities=27% Similarity=0.308 Sum_probs=54.1
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCC-CEEEEE-cCCCCCCC-C-----c---ccc--cChhhhhcCCcEEEEeccCChhh
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFG-FIISYN-SRRKRPSV-L-----F---PYC--ANVYDLAVNSDVLVVCCALTEQT 144 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G-~~V~~~-~~~~~~~~-~-----~---~~~--~~l~el~~~aDiv~~~~p~t~~t 144 (223)
-.+||||| .|.+|+.+.+.|...- +++..+ +++..... . + ..+ .+.++++.++|++++|+|....
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~s- 91 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGAS- 91 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTHH-
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHHH-
Confidence 45799998 6999999999998764 355544 33211110 0 0 011 2345555789999999995532
Q ss_pred hhccCHHHHhcCCCCcEEEEcCCC
Q 035615 145 HHIINKDVMAELGKGGMIINVGRG 168 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~arg 168 (223)
++....+ .|+.+|+.|.-
T Consensus 92 -----~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 92 -----YDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp -----HHHHTTC-CSCEEEESSST
T ss_pred -----HHHHHHh-CCCEEEECChh
Confidence 3444555 79999999854
No 428
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.11 E-value=0.0095 Score=51.76 Aligned_cols=63 Identities=8% Similarity=0.106 Sum_probs=45.2
Q ss_pred CCEEEEEe-cChHHHH-HH----HHHHhCC-CEE----------EEEcCCCCCCC------Cc-ccccChhhhhcC--Cc
Q 035615 79 GMQVGIVR-LGNIGSE-VL----NRLQAFG-FII----------SYNSRRKRPSV------LF-PYCANVYDLAVN--SD 132 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~-~a----~~l~~~G-~~V----------~~~~~~~~~~~------~~-~~~~~l~el~~~--aD 132 (223)
..+||||| +|.||+. .+ +.++..+ ..+ .+++++++... +. ..+.++++++++ .|
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD 85 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDT 85 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCC
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCC
Confidence 35799999 9999998 66 6666543 232 37888775432 23 246899999965 89
Q ss_pred EEEEeccCC
Q 035615 133 VLVVCCALT 141 (223)
Q Consensus 133 iv~~~~p~t 141 (223)
+|++++|..
T Consensus 86 ~V~i~tp~~ 94 (383)
T 3oqb_A 86 MFFDAATTQ 94 (383)
T ss_dssp EEEECSCSS
T ss_pred EEEECCCch
Confidence 999999854
No 429
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=96.10 E-value=0.0071 Score=50.95 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=32.6
Q ss_pred CCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCC
Q 035615 78 GGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRP 114 (223)
Q Consensus 78 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~ 114 (223)
++++|.|.|. |.||+.+++.|...|++|++.+|+...
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 39 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE 39 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 5789999996 999999999999999999999987643
No 430
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.09 E-value=0.0084 Score=51.84 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=24.7
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEEEEc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIISYNS 109 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~~ 109 (223)
.+|||+|+|+||+.+++.+... +++|.+.+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 4899999999999999998765 67766543
No 431
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=96.09 E-value=0.025 Score=50.67 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=64.3
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCCEEEE-Ec-------CCCC--CC-------------CCcc--------cccC
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGFIISY-NS-------RRKR--PS-------------VLFP--------YCAN 123 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~-------~~~~--~~-------------~~~~--------~~~~ 123 (223)
.++.|++|.|.|+|++|+.+++.|...|.+|+. .| +..- +. .... ...+
T Consensus 226 ~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~ 305 (449)
T 1bgv_A 226 DTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFP 305 (449)
T ss_dssp CCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEE
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeC
Confidence 468899999999999999999999999999875 33 2211 00 0000 0011
Q ss_pred hhhhh-cCCcEEEEeccCChhhhhccCHHHHhcCCC-C-cEEEEcCCCcccCHHHHHHHHHcC-Cce
Q 035615 124 VYDLA-VNSDVLVVCCALTEQTHHIINKDVMAELGK-G-GMIINVGRGALIDEKEMLQFLVQG-DIN 186 (223)
Q Consensus 124 l~el~-~~aDiv~~~~p~t~~t~~li~~~~l~~mk~-g-a~lIN~arg~~vd~~al~~aL~~~-~i~ 186 (223)
.++++ -.||+++-|. +.+.|+.+..+.++. | .+++--+.+.+- .++- +.|.++ .+.
T Consensus 306 ~~e~~~~~~Dil~P~A-----~~~~I~~~na~~l~a~g~kiV~EgAN~p~T-~eA~-~~l~~~~Gi~ 365 (449)
T 1bgv_A 306 GEKPWGQKVDIIMPCA-----TQNDVDLEQAKKIVANNVKYYIEVANMPTT-NEAL-RFLMQQPNMV 365 (449)
T ss_dssp TCCGGGSCCSEEECCS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBC-HHHH-HHHHHCTTCE
T ss_pred chhhhcCCcceeeccc-----cccccchhhHHHHHhcCCeEEEeCCCCcCC-HHHH-HHHHHcCCEE
Confidence 12233 3678776554 355677776666652 2 356666677754 4443 566666 554
No 432
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=96.09 E-value=0.037 Score=46.23 Aligned_cols=37 Identities=14% Similarity=-0.011 Sum_probs=33.5
Q ss_pred cccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCC
Q 035615 75 FKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRR 111 (223)
Q Consensus 75 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~ 111 (223)
.++.||++.|.|. |.||+.+|+.|...|++|++.++.
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999995 899999999999999999988776
No 433
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.09 E-value=0.0037 Score=53.49 Aligned_cols=78 Identities=9% Similarity=-0.003 Sum_probs=52.7
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC----Ccc-------cccChhhh-hcCCcEEEEeccCChhhhh
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFP-------YCANVYDL-AVNSDVLVVCCALTEQTHH 146 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~-------~~~~l~el-~~~aDiv~~~~p~t~~t~~ 146 (223)
.+++.|+|+|++|+.+++.|...|. |.+.+++++..+ +.. ....++++ ++++|.++++++..+. .
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~--n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE--T 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH--H
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH--H
Confidence 5689999999999999999999999 999998775332 111 11234444 7789999998874432 2
Q ss_pred ccCHHHHhcCCCC
Q 035615 147 IINKDVMAELGKG 159 (223)
Q Consensus 147 li~~~~l~~mk~g 159 (223)
+.-....+.+.+.
T Consensus 192 ~~~~~~ar~~~~~ 204 (336)
T 1lnq_A 192 IHCILGIRKIDES 204 (336)
T ss_dssp HHHHHHHHTTCTT
T ss_pred HHHHHHHHHHCCC
Confidence 2223445555555
No 434
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.07 E-value=0.0095 Score=49.52 Aligned_cols=61 Identities=15% Similarity=0.004 Sum_probs=46.9
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCC-CEEEEEcCCCCCC-------CCc-------ccccChhhhhcCCcEEEEecc
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFG-FIISYNSRRKRPS-------VLF-------PYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G-~~V~~~~~~~~~~-------~~~-------~~~~~l~el~~~aDiv~~~~p 139 (223)
.++|.|.|. |.||+.+++.|...| ++|.+.+|++... .+. ....++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999996 999999999999888 9999998876542 111 112346677889999988764
No 435
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.06 E-value=0.0096 Score=55.18 Aligned_cols=37 Identities=22% Similarity=0.304 Sum_probs=32.8
Q ss_pred cccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCC
Q 035615 75 FKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRR 111 (223)
Q Consensus 75 ~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~ 111 (223)
..|++++|.|||.|.+|..+|+.|...|. ++..+|..
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 56999999999999999999999999998 57777644
No 436
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.04 E-value=0.004 Score=53.35 Aligned_cols=85 Identities=18% Similarity=0.110 Sum_probs=58.0
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC---C-ccc-----ccChhhhh-----cCCcEEEEeccCCh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV---L-FPY-----CANVYDLA-----VNSDVLVVCCALTE 142 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~---~-~~~-----~~~l~el~-----~~aDiv~~~~p~t~ 142 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+ . +.. ..++.+.+ ...|+|+-++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 68999999999999999999999999 8999987653311 1 111 11233322 25799988876322
Q ss_pred hhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 143 QTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 143 ~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
.. +..++.|+++..++.++.
T Consensus 244 ~~-----~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 244 AI-----HQGLMALIPGGEARILGI 263 (343)
T ss_dssp HH-----HHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHhcCCEEEEEec
Confidence 21 345667777777877764
No 437
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=96.04 E-value=0.017 Score=49.59 Aligned_cols=89 Identities=16% Similarity=0.208 Sum_probs=58.0
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCC-------EEEEEcCC----CCCC--------C---Cc----ccccChhhhhcCC
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGF-------IISYNSRR----KRPS--------V---LF----PYCANVYDLAVNS 131 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~-------~V~~~~~~----~~~~--------~---~~----~~~~~l~el~~~a 131 (223)
.++|.|+|. |.+|+.++..|...|+ +|..+|+. .+.. . .+ ....++.+.++.|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 468999997 9999999999987775 78889887 2101 0 11 1135678889999
Q ss_pred cEEEEeccCCh--h-hh-hcc--C----H---HHHhcC-CCCcEEEEcCC
Q 035615 132 DVLVVCCALTE--Q-TH-HII--N----K---DVMAEL-GKGGMIINVGR 167 (223)
Q Consensus 132 Div~~~~p~t~--~-t~-~li--~----~---~~l~~m-k~ga~lIN~ar 167 (223)
|+|+.+..... . ++ .++ | . +.+... ++.++||+++.
T Consensus 85 D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 85 DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99988764221 1 11 010 1 1 223334 47889999983
No 438
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.03 E-value=0.018 Score=51.64 Aligned_cols=92 Identities=14% Similarity=0.185 Sum_probs=64.8
Q ss_pred cccCCCEEEEEecC----------hHHHHHHHHHHhCCCEEEEEcCCCCCCC------CcccccChhhhhcCCcEEEEec
Q 035615 75 FKLGGMQVGIVRLG----------NIGSEVLNRLQAFGFIISYNSRRKRPSV------LFPYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 75 ~~l~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~el~~~aDiv~~~~ 138 (223)
..+.|++|+|+|+- .=...+++.|...|++|.+|||.-.... ......++++.++.+|.|++++
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t 393 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVT 393 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEECS
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEcc
Confidence 45889999999973 3468899999999999999998763210 1223467889999999999998
Q ss_pred cCChhhhhccCHH-HHhcCCCCcEEEEcCCCcc
Q 035615 139 ALTEQTHHIINKD-VMAELGKGGMIINVGRGAL 170 (223)
Q Consensus 139 p~t~~t~~li~~~-~l~~mk~ga~lIN~arg~~ 170 (223)
...+ -+. ++-+ ..+.|+ +.+++|+ |+-+
T Consensus 394 ~~~~-f~~-~~~~~~~~~~~-~~~i~D~-r~~~ 422 (450)
T 3gg2_A 394 EWKE-FRM-PDWSALSQAMA-ASLVIDG-RNVY 422 (450)
T ss_dssp CCGG-GSS-CCHHHHHHHSS-SCEEEES-SCCC
T ss_pred CCHH-Hhh-cCHHHHHHhcC-CCEEEEC-CCCC
Confidence 7543 222 3444 344566 5678885 5543
No 439
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.03 E-value=0.008 Score=51.52 Aligned_cols=64 Identities=16% Similarity=0.042 Sum_probs=47.1
Q ss_pred ccCCCEEEEEe-cChHHHHHHHHHHhC-CCEEEEEcCCCCCCCC------c-------c-cccChhhhhcCCcEEEEecc
Q 035615 76 KLGGMQVGIVR-LGNIGSEVLNRLQAF-GFIISYNSRRKRPSVL------F-------P-YCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 76 ~l~g~~vgIiG-~G~iG~~~a~~l~~~-G~~V~~~~~~~~~~~~------~-------~-~~~~l~el~~~aDiv~~~~p 139 (223)
.+.+++|.|.| .|.||+.+++.|... |++|++.+|+...... . . ...++.++++.+|+|+.+..
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 46789999999 699999999999887 9999999987654321 1 1 12235567788999987654
No 440
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.03 E-value=0.0072 Score=51.64 Aligned_cols=61 Identities=16% Similarity=0.202 Sum_probs=43.3
Q ss_pred CCEEEEEecChHHHHHHHHHHh--CCCEE-EEEcCCCCC-CC------Ccc-cccChhhhhc-----CCcEEEEecc
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQA--FGFII-SYNSRRKRP-SV------LFP-YCANVYDLAV-----NSDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~--~G~~V-~~~~~~~~~-~~------~~~-~~~~l~el~~-----~aDiv~~~~p 139 (223)
..+|||||+|.||+.+++.+.. -++++ .++|+++.. .. +.. ...+.+++++ ..|+|+.++|
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp 80 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS 80 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC
Confidence 3589999999999999999844 46665 467877654 11 222 1345677754 4799999998
No 441
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.02 E-value=0.0099 Score=55.20 Aligned_cols=65 Identities=18% Similarity=0.248 Sum_probs=47.4
Q ss_pred CcchHHHHHHHHHHHHHhCCcHHHHHHHcCCCCCCCCCCCccccCCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCC
Q 035615 34 DLPIVADLAIGLLIDFLRRISPGNWYVRAGLWAKTGDYPLGFKLGGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRK 112 (223)
Q Consensus 34 ~~~~vAE~~~~~~l~~~r~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~ 112 (223)
+....||.+.-+-|.+.|. ..|... -...|++++|.|||.|.+|..+|+.|...|. ++..+|...
T Consensus 295 dp~~la~~~~~Lnlklm~w----------Rllp~~----g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 295 DPLKIADQSVDLNLKLMKW----------RILPDL----NLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp CHHHHHHHHHHHHHHHHHH----------HTCTTC----CHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CHHHHHhhhhhhhhHHHHH----------hhcchh----hHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 5566777777776655542 223321 1136899999999999999999999999998 577777653
No 442
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=96.02 E-value=0.006 Score=52.71 Aligned_cols=30 Identities=23% Similarity=0.334 Sum_probs=24.3
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEEEEc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIISYNS 109 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~~ 109 (223)
.+|||+|+|.||+.+.+.|... .++|.+.+
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain 32 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVN 32 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEe
Confidence 3799999999999999998765 56776543
No 443
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.01 E-value=0.0064 Score=52.50 Aligned_cols=84 Identities=14% Similarity=0.005 Sum_probs=48.8
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhC---CCEEEEEc-CCCCCC-C---Cc-ccccCh-hhhhcCCcEEEEeccCChhhhhc
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAF---GFIISYNS-RRKRPS-V---LF-PYCANV-YDLAVNSDVLVVCCALTEQTHHI 147 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~---G~~V~~~~-~~~~~~-~---~~-~~~~~l-~el~~~aDiv~~~~p~t~~t~~l 147 (223)
..+|+|+| +|.+|+.+.+.|... .+++..+. ++.... . +. ....++ .+.+..+|+|+.|+|.... ...
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~s-~~~ 81 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELS-AKW 81 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHHH-HHH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchHH-HHH
Confidence 36899999 999999999998875 34665543 322111 0 10 011111 1245689999999984322 221
Q ss_pred cCHHHHhcCCCCcEEEEcCC
Q 035615 148 INKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 148 i~~~~l~~mk~ga~lIN~ar 167 (223)
. .. .++.|+.+|+.+-
T Consensus 82 a-~~---~~~~G~~vId~s~ 97 (336)
T 2r00_A 82 A-PI---AAEAGVVVIDNTS 97 (336)
T ss_dssp H-HH---HHHTTCEEEECSS
T ss_pred H-HH---HHHcCCEEEEcCC
Confidence 1 11 2345777777663
No 444
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=96.01 E-value=0.017 Score=51.38 Aligned_cols=91 Identities=10% Similarity=0.130 Sum_probs=67.4
Q ss_pred cCCCEEEEEe-----cCh---HHHHHHHHHHhCCCEEEEEcCCCCC-CC-------------C--cccccChhhhhcCCc
Q 035615 77 LGGMQVGIVR-----LGN---IGSEVLNRLQAFGFIISYNSRRKRP-SV-------------L--FPYCANVYDLAVNSD 132 (223)
Q Consensus 77 l~g~~vgIiG-----~G~---iG~~~a~~l~~~G~~V~~~~~~~~~-~~-------------~--~~~~~~l~el~~~aD 132 (223)
|.|++|+|+| +|. +.++++..+..+|++|.+..|..-. .. + +....+++|.++.+|
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 8899999997 354 9999999999999999988876422 11 1 133578999999999
Q ss_pred EEEEeccCC----------------h-------------h--hhhccCHHHHhcCCC-CcEEEEcCC
Q 035615 133 VLVVCCALT----------------E-------------Q--THHIINKDVMAELGK-GGMIINVGR 167 (223)
Q Consensus 133 iv~~~~p~t----------------~-------------~--t~~li~~~~l~~mk~-ga~lIN~ar 167 (223)
+|..-+=.. + + ...-++++.++.+|+ +++|.-+.-
T Consensus 266 VVytd~W~sm~~Q~ER~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~vt~elm~~ak~~dai~MHcLP 332 (418)
T 2yfk_A 266 VVYPKSWAPFAAMEKRTELYGNGDQAGIDQLEQELLSQNKKHKDWECTEELMKTTKDGKALYMHCLP 332 (418)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHGGGTTCCBCHHHHHTSGGGCCEECCCSC
T ss_pred EEEEccccchhHHHHHhhhhccccchhhhhhhhhhhhHHHHHhhcCCCHHHHHhcCCCCeEEECCCC
Confidence 998853100 0 0 124568999999986 899998774
No 445
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.01 E-value=0.016 Score=50.27 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=48.6
Q ss_pred CEEEEEecChHHHHHHHHHHhC-CCEEEEE-cCCCCCCC------------Cc--------------ccccChhhhhcCC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF-GFIISYN-SRRKRPSV------------LF--------------PYCANVYDLAVNS 131 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~-G~~V~~~-~~~~~~~~------------~~--------------~~~~~l~el~~~a 131 (223)
.+|||+|+|+||+.+++.+... ++++.++ ++++.... .+ ....+.++++..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 4899999999999999998765 5786654 43221100 00 0011344556789
Q ss_pred cEEEEeccCChhhhhccCHHHHhcCCCCcEEEEc
Q 035615 132 DVLVVCCALTEQTHHIINKDVMAELGKGGMIINV 165 (223)
Q Consensus 132 Div~~~~p~t~~t~~li~~~~l~~mk~ga~lIN~ 165 (223)
|+|+.|+|.....+.. + -..++.|..+|..
T Consensus 83 DiV~eatg~~~s~~~a---~-~~~l~aG~~VI~s 112 (343)
T 2yyy_A 83 DIVVDGAPKKIGKQNL---E-NIYKPHKVKAILQ 112 (343)
T ss_dssp SEEEECCCTTHHHHHH---H-HTTTTTTCEEEEC
T ss_pred CEEEECCCccccHHHH---H-HHHHHCCCEEEEC
Confidence 9999998854211111 1 1345666665543
No 446
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.00 E-value=0.0084 Score=48.07 Aligned_cols=63 Identities=16% Similarity=0.079 Sum_probs=47.6
Q ss_pred CCCEEEEEe-cChHHHHHHHHHHhC--CCEEEEEcCCCCCC----C-------CcccccChhhhhcCCcEEEEeccC
Q 035615 78 GGMQVGIVR-LGNIGSEVLNRLQAF--GFIISYNSRRKRPS----V-------LFPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG-~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~----~-------~~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
.+++|.|.| .|.||+.+++.|... |++|+..+|++... . +.....+++++++..|+|+.+...
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 578999999 699999999999988 89999998864321 0 111224566788899999887653
No 447
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.99 E-value=0.0054 Score=53.05 Aligned_cols=84 Identities=14% Similarity=0.063 Sum_probs=57.8
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccccc-----cChhh----hhc--CCcEEEEeccCC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYC-----ANVYD----LAV--NSDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~-----~~l~e----l~~--~aDiv~~~~p~t 141 (223)
.|++|.|+|.|.+|...++.++.+|++|++.++++++.+ ++... .++.+ +.. ..|+|+-++. .
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 489999999999999999999999999999887754321 22110 12222 222 5788888876 2
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
+ .-...++.++++..++.++.
T Consensus 268 ~-----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 A-----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp S-----CHHHHHHHEEEEEEEEEECC
T ss_pred H-----HHHHHHHHhhcCCEEEEEec
Confidence 1 11456677888888887763
No 448
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.99 E-value=0.0037 Score=53.50 Aligned_cols=84 Identities=14% Similarity=0.140 Sum_probs=56.8
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc-----ccChhhhh----cCCcEEEEeccCChh
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY-----CANVYDLA----VNSDVLVVCCALTEQ 143 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~-----~~~l~el~----~~aDiv~~~~p~t~~ 143 (223)
.|++|.|+|.|.+|...++.++.+|++|++.++++++.+ ++.. ..++.+.+ ...|+++.+....+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 488999999999999999999999999999987664322 2211 11222222 257888887652221
Q ss_pred hhhccCHHHHhcCCCCcEEEEcC
Q 035615 144 THHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 144 t~~li~~~~l~~mk~ga~lIN~a 166 (223)
+ ...++.++++..++.++
T Consensus 246 ----~-~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 246 ----F-SQAIGMVRRGGTIALNG 263 (340)
T ss_dssp ----H-HHHHHHEEEEEEEEECS
T ss_pred ----H-HHHHHHhccCCEEEEeC
Confidence 1 34556677777777765
No 449
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.98 E-value=0.049 Score=47.40 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=66.7
Q ss_pred cccCCCEEEEEec--ChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------------CcccccChhhhhcCCcEEEE
Q 035615 75 FKLGGMQVGIVRL--GNIGSEVLNRLQAFGFIISYNSRRKRPSV----------------LFPYCANVYDLAVNSDVLVV 136 (223)
Q Consensus 75 ~~l~g~~vgIiG~--G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------------~~~~~~~l~el~~~aDiv~~ 136 (223)
..+.|++|++||= +++.++.+..+..+|++|.+..|..-... .+....+++|.++.+|+|..
T Consensus 177 ~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt 256 (358)
T 4h31_A 177 KALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYT 256 (358)
T ss_dssp CCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEE
T ss_pred CCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEE
Confidence 3588999999994 58999999999999999998877432111 12235789999999999975
Q ss_pred eccC----Chh---------hhhccCHHHHhcC-CCCcEEEEcC
Q 035615 137 CCAL----TEQ---------THHIINKDVMAEL-GKGGMIINVG 166 (223)
Q Consensus 137 ~~p~----t~~---------t~~li~~~~l~~m-k~ga~lIN~a 166 (223)
-.=. .++ ...-++.+.++++ ||+++|.-+.
T Consensus 257 ~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 257 DVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 4311 111 1234788888764 7899998876
No 450
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.97 E-value=0.024 Score=48.90 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=48.0
Q ss_pred cCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cc-------ccccChhhhhcCCcEEEEecc
Q 035615 77 LGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LF-------PYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 77 l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~-------~~~~~l~el~~~aDiv~~~~p 139 (223)
..+++|.|.|. |.||+.+++.|...|++|++.+|...... .. ....+++++++.+|+|+.+..
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 46789999997 99999999999999999999988765432 11 112345677889999987764
No 451
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.96 E-value=0.037 Score=46.01 Aligned_cols=62 Identities=23% Similarity=0.136 Sum_probs=44.5
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCC-------------CCc-------ccccChhhhhcCCcEEEEe
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPS-------------VLF-------PYCANVYDLAVNSDVLVVC 137 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~-------------~~~-------~~~~~l~el~~~aDiv~~~ 137 (223)
.++|.|.| .|.+|+.+++.|...|++|.+.+|+.... .+. ....++.++++.+|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 46899999 59999999999999999999998875321 111 1123455667778877776
Q ss_pred ccC
Q 035615 138 CAL 140 (223)
Q Consensus 138 ~p~ 140 (223)
...
T Consensus 84 a~~ 86 (313)
T 1qyd_A 84 LAG 86 (313)
T ss_dssp CCC
T ss_pred Ccc
Confidence 653
No 452
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.95 E-value=0.014 Score=52.93 Aligned_cols=61 Identities=23% Similarity=0.159 Sum_probs=47.8
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcc--cccChhhhhcCCcEEEEecc
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFP--YCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~--~~~~l~el~~~aDiv~~~~p 139 (223)
+++|.|.| .|.||+.+++.|...|++|++.+|+........ ....+.+.+..+|+|+.+..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~ 210 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAG 210 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCC
Confidence 78999999 699999999999999999999998876543211 12345667889999987664
No 453
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.92 E-value=0.012 Score=49.72 Aligned_cols=66 Identities=21% Similarity=0.032 Sum_probs=44.6
Q ss_pred ccccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC-------Ccc-------cccChhhhhcC--CcEEEE
Q 035615 74 GFKLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV-------LFP-------YCANVYDLAVN--SDVLVV 136 (223)
Q Consensus 74 ~~~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-------~~~-------~~~~l~el~~~--aDiv~~ 136 (223)
...+.+++|.|.| .|.||+.+++.|...|++|++.+|...... ... ...+++++++. .|+|+.
T Consensus 16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih 95 (333)
T 2q1w_A 16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVH 95 (333)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence 3457899999998 699999999999999999999988653211 110 11234556666 898887
Q ss_pred ecc
Q 035615 137 CCA 139 (223)
Q Consensus 137 ~~p 139 (223)
+..
T Consensus 96 ~A~ 98 (333)
T 2q1w_A 96 TAA 98 (333)
T ss_dssp CCC
T ss_pred Cce
Confidence 664
No 454
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=95.91 E-value=0.014 Score=47.31 Aligned_cols=92 Identities=18% Similarity=0.184 Sum_probs=58.0
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCC-c----ccccChhhhhcCC----cEEEEeccCCh-h--hhh
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVL-F----PYCANVYDLAVNS----DVLVVCCALTE-Q--THH 146 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~-~----~~~~~l~el~~~a----Div~~~~p~t~-~--t~~ 146 (223)
|++.|.|. |.||+.+++.|...|++|++.+|+...... . ....++++++++. |+|+.+.-... . -+.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~ 81 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGN 81 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHH
Confidence 57888884 899999999999999999999887654321 1 1123345556544 99988764332 0 010
Q ss_pred c----------cCHHHHhcCCC--CcEEEEcCCCccc
Q 035615 147 I----------INKDVMAELGK--GGMIINVGRGALI 171 (223)
Q Consensus 147 l----------i~~~~l~~mk~--ga~lIN~arg~~v 171 (223)
+ +.+..++.|++ ...|||++.....
T Consensus 82 ~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 82 VVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred HHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 1 12334455533 3689999876544
No 455
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.89 E-value=0.01 Score=51.65 Aligned_cols=31 Identities=23% Similarity=0.463 Sum_probs=24.5
Q ss_pred CEEEEEecChHHHHHHHHHHhC--C--CEEE-EEcC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF--G--FIIS-YNSR 110 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~--G--~~V~-~~~~ 110 (223)
.+|||||+|.||+.+++.+... | ++|. ++++
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4799999999999999999875 3 5654 4554
No 456
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.87 E-value=0.0033 Score=51.73 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=43.5
Q ss_pred EEEEEec-ChHHHHHHHHHHhC--CCEEEEEcCCCCCCC-----Cc-------ccccChhhhhcCCcEEEEecc
Q 035615 81 QVGIVRL-GNIGSEVLNRLQAF--GFIISYNSRRKRPSV-----LF-------PYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 81 ~vgIiG~-G~iG~~~a~~l~~~--G~~V~~~~~~~~~~~-----~~-------~~~~~l~el~~~aDiv~~~~p 139 (223)
+|.|.|. |.||+.+++.|... |++|.+.+|++.... +. ....++.++++.+|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4788886 99999999999987 999999988765421 11 112346677889999987664
No 457
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.86 E-value=0.0073 Score=52.29 Aligned_cols=29 Identities=21% Similarity=0.250 Sum_probs=24.0
Q ss_pred CEEEEEecChHHHHHHHHHHhC---CCEEEEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF---GFIISYN 108 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~---G~~V~~~ 108 (223)
.+|||+|+|+||+.+.+.|... +++|.++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaI 34 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAI 34 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEE
Confidence 4899999999999999998765 3777654
No 458
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.85 E-value=0.017 Score=48.58 Aligned_cols=61 Identities=11% Similarity=0.066 Sum_probs=45.0
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cc-------ccccChhhhhcCCcEEEEecc
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LF-------PYCANVYDLAVNSDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~-------~~~~~l~el~~~aDiv~~~~p 139 (223)
.++|.|.| .|.||+.+++.|...|++|++.+|++.... .. ....++.++++.+|+|+.+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 35899999 599999999999999999999988765421 11 112345677888999987764
No 459
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.84 E-value=0.0078 Score=52.24 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=58.5
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc-----ccChhhhhc--------CCcEEEEec
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY-----CANVYDLAV--------NSDVLVVCC 138 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~-----~~~l~el~~--------~aDiv~~~~ 138 (223)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+ ++.. ..++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 48899999999999999999999999 8988887764322 2211 123333333 379998887
Q ss_pred cCChhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 139 ALTEQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 139 p~t~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
... .+ + ...++.++++..++.++-
T Consensus 262 G~~-~~---~-~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GVA-ET---V-KQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CCH-HH---H-HHHHHHEEEEEEEEECSC
T ss_pred CCH-HH---H-HHHHHHhccCCEEEEEec
Confidence 522 21 1 345667788888887763
No 460
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.84 E-value=0.0072 Score=49.79 Aligned_cols=61 Identities=13% Similarity=-0.062 Sum_probs=45.7
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccc----cccChhhhhcCCcEEEEeccCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFP----YCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~----~~~~l~el~~~aDiv~~~~p~t 141 (223)
.++|.|.|.|.||+.+++.|...|++|++.+|++.... +.. ...+++ +..+|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 47999999999999999999999999999998765321 111 112333 77899998877543
No 461
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=95.84 E-value=0.012 Score=49.20 Aligned_cols=63 Identities=19% Similarity=0.175 Sum_probs=44.4
Q ss_pred CCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC--------CcccccChhhhhcC--CcEEEEeccC
Q 035615 78 GGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV--------LFPYCANVYDLAVN--SDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~l~el~~~--aDiv~~~~p~ 140 (223)
..++|.|.| .|.||+.+++.|...|++|++.+|...... +.....+++++++. .|+|+.+...
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 467899998 599999999999999999999988765311 11112334556654 8999877654
No 462
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.83 E-value=0.0062 Score=52.19 Aligned_cols=84 Identities=21% Similarity=0.223 Sum_probs=57.3
Q ss_pred CCCEEEEEecChHHHHHHHHHHhC--CCEEEEEcCCCCCCC-----CcccccC-------hhhhhc--CCcEEEEeccCC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAF--GFIISYNSRRKRPSV-----LFPYCAN-------VYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~--G~~V~~~~~~~~~~~-----~~~~~~~-------l~el~~--~aDiv~~~~p~t 141 (223)
.|.+|.|+|.|.+|...++.++.+ |++|++.++++++.+ ++....+ .+++-. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 689999999999999999999999 999999987764322 2221111 112221 579999888632
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcC
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~a 166 (223)
+.. ...++.++++..++.++
T Consensus 250 ~~~-----~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 250 ETT-----YNLGKLLAQEGAIILVG 269 (344)
T ss_dssp HHH-----HHHHHHEEEEEEEEECC
T ss_pred HHH-----HHHHHHhhcCCEEEEeC
Confidence 111 34566677777777765
No 463
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.83 E-value=0.0053 Score=52.57 Aligned_cols=60 Identities=12% Similarity=0.080 Sum_probs=44.6
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEE-EEcCCCC-CCC---------C--cccccChhhhhc--CCcEEEEeccC
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIIS-YNSRRKR-PSV---------L--FPYCANVYDLAV--NSDVLVVCCAL 140 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~-~~~~~~~-~~~---------~--~~~~~~l~el~~--~aDiv~~~~p~ 140 (223)
.+|||||+|.+|+..++.+ .-++++. ++|+++. ... + ...+.+++++++ +.|+|++++|.
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~ 77 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVF 77 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCc
Confidence 5899999999999777766 5577865 6787762 221 1 235689999986 48999999884
No 464
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=95.82 E-value=0.018 Score=48.82 Aligned_cols=109 Identities=14% Similarity=0.212 Sum_probs=62.5
Q ss_pred CEEEEEe-cChHHHHHHHHHHhCCC--EEEEEcC--CCCCCCC----c----------ccccChhhhhcCCcEEEEeccC
Q 035615 80 MQVGIVR-LGNIGSEVLNRLQAFGF--IISYNSR--RKRPSVL----F----------PYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 80 ~~vgIiG-~G~iG~~~a~~l~~~G~--~V~~~~~--~~~~~~~----~----------~~~~~l~el~~~aDiv~~~~p~ 140 (223)
++|+|+| .|.+|+.++..|...|. ++..+|+ .....++ . ....+..+.++.+|+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4899999 99999999999987665 6888887 4322110 0 0001225678999999998753
Q ss_pred Chh---hh-hcc--C----H---HHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHcCCceEE
Q 035615 141 TEQ---TH-HII--N----K---DVMAELGKGGMIINVGRGALIDEKEMLQF--LVQGDINGV 188 (223)
Q Consensus 141 t~~---t~-~li--~----~---~~l~~mk~ga~lIN~arg~~vd~~al~~a--L~~~~i~~a 188 (223)
... ++ .++ | + +.+....+.+++++++.--=+....+.+. +...++.|.
T Consensus 81 ~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 81 PRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeec
Confidence 211 11 000 1 1 22334467899999744322223333333 333455544
No 465
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.81 E-value=0.015 Score=46.79 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=43.9
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc-----ccccChhhhhc----CCcEEEEecc
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVLF-----PYCANVYDLAV----NSDVLVVCCA 139 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~-----~~~~~l~el~~----~aDiv~~~~p 139 (223)
|++.|.|. |.||+.+++.|...|++|++.+|+....... ....+++++++ ..|+|+.+..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag 71 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAG 71 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCC
Confidence 57899986 9999999999999999999998876543211 11223445554 7899988764
No 466
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.80 E-value=0.024 Score=45.26 Aligned_cols=60 Identities=12% Similarity=0.060 Sum_probs=43.6
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc-------ccccChhhhhc------CCcEEEEecc
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSVLF-------PYCANVYDLAV------NSDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~-------~~~~~l~el~~------~aDiv~~~~p 139 (223)
+|++.|.| .|.||+.+++.|...|++|++.+|+.. .... ....+++++++ ..|+++.+..
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 68899998 599999999999999999999888765 2211 11223444554 6788887653
No 467
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.80 E-value=0.0061 Score=51.73 Aligned_cols=88 Identities=23% Similarity=0.195 Sum_probs=55.6
Q ss_pred CEEEEEecChHHHHHHHHHHhCCC--EEEEEcCCCCCCC-------------Cc-c--cccChhhhhcCCcEEEEec--c
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGF--IISYNSRRKRPSV-------------LF-P--YCANVYDLAVNSDVLVVCC--A 139 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~-------------~~-~--~~~~l~el~~~aDiv~~~~--p 139 (223)
+||+|||.|.||+.+|-.|...+. ++..+|......+ .. . ...+..+.++.||+|+++. |
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 589999999999999998876554 7889998653221 00 0 1122345689999999986 3
Q ss_pred CChh-hh-hcc--CH-------HHHhcCCCCcEEEEcCC
Q 035615 140 LTEQ-TH-HII--NK-------DVMAELGKGGMIINVGR 167 (223)
Q Consensus 140 ~t~~-t~-~li--~~-------~~l~~mk~ga~lIN~ar 167 (223)
-.|. || .++ |. +.+..-.|.++++.++.
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 2221 22 122 22 22333467888888754
No 468
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.79 E-value=0.015 Score=49.53 Aligned_cols=66 Identities=17% Similarity=0.085 Sum_probs=49.1
Q ss_pred cccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCC----------------CCc-------ccccChhhhhcC
Q 035615 75 FKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPS----------------VLF-------PYCANVYDLAVN 130 (223)
Q Consensus 75 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~----------------~~~-------~~~~~l~el~~~ 130 (223)
..+.+++|.|.|. |.||+.+++.|...|++|++.+|..... ... ....+++++++.
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 102 (352)
T 1sb8_A 23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG 102 (352)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC
Confidence 3477899999997 9999999999999999999998865311 111 112345567889
Q ss_pred CcEEEEeccC
Q 035615 131 SDVLVVCCAL 140 (223)
Q Consensus 131 aDiv~~~~p~ 140 (223)
.|+|+.+...
T Consensus 103 ~d~vih~A~~ 112 (352)
T 1sb8_A 103 VDYVLHQAAL 112 (352)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEECCcc
Confidence 9999877653
No 469
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.76 E-value=0.0085 Score=49.42 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=33.6
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCC
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKR 113 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~ 113 (223)
.+.||++.|.|. |.||+.+++.|...|++|++.+|+..
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~ 41 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREER 41 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 377999999995 89999999999999999999988753
No 470
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=95.76 E-value=0.01 Score=48.86 Aligned_cols=39 Identities=21% Similarity=0.335 Sum_probs=34.3
Q ss_pred cccCCCEEEEEecC---hHHHHHHHHHHhCCCEEEEEcCCCC
Q 035615 75 FKLGGMQVGIVRLG---NIGSEVLNRLQAFGFIISYNSRRKR 113 (223)
Q Consensus 75 ~~l~g~~vgIiG~G---~iG~~~a~~l~~~G~~V~~~~~~~~ 113 (223)
.+|+||++.|-|.+ .||+++|+.|...|++|++.+|+.+
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER 43 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 35899999999974 5999999999999999999988754
No 471
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=95.75 E-value=0.0087 Score=50.27 Aligned_cols=41 Identities=20% Similarity=-0.009 Sum_probs=35.7
Q ss_pred CccccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCC
Q 035615 73 LGFKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKR 113 (223)
Q Consensus 73 ~~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~ 113 (223)
...++.||++.|.|. |.||+++|+.|...|++|++.+++..
T Consensus 22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~ 63 (299)
T 3t7c_A 22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQ 63 (299)
T ss_dssp CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccc
Confidence 345689999999995 78999999999999999999888743
No 472
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.73 E-value=0.0065 Score=52.12 Aligned_cols=83 Identities=17% Similarity=0.165 Sum_probs=56.1
Q ss_pred CCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Ccccc----cChhh----hhc--CCcEEEEeccCC
Q 035615 78 GGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPYC----ANVYD----LAV--NSDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~----~~l~e----l~~--~aDiv~~~~p~t 141 (223)
.|++|.|+|. |.||...++.++.+|++|++.+++.++.+ ++... .++.+ +.. ..|+++.++...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 4899999998 99999999999999999999888665432 11110 12222 221 478888877531
Q ss_pred hhhhhccCHHHHhcCCCCcEEEEcC
Q 035615 142 EQTHHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 142 ~~t~~li~~~~l~~mk~ga~lIN~a 166 (223)
.-...+..++++..++.++
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 1245667778888888776
No 473
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.72 E-value=0.021 Score=49.10 Aligned_cols=58 Identities=10% Similarity=0.102 Sum_probs=42.1
Q ss_pred CEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCCCC-Cc----cc---ccC---hhhhhcCCcEEEEe
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRPSV-LF----PY---CAN---VYDLAVNSDVLVVC 137 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-~~----~~---~~~---l~el~~~aDiv~~~ 137 (223)
|||+|+|-|..|..+++.++.+|++|+++|+++.... .. .. ..+ +.++.+.+|.|+..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~ 70 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVIKEPEKLLELSKRVDAVLPV 70 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence 7999999999999999999999999999887664321 11 00 112 23456789988654
No 474
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=95.71 E-value=0.02 Score=46.73 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=33.3
Q ss_pred CccccCCCEEEEEe-cChHHHHHHHHHHhCC---CEEEEEcCCCCC
Q 035615 73 LGFKLGGMQVGIVR-LGNIGSEVLNRLQAFG---FIISYNSRRKRP 114 (223)
Q Consensus 73 ~~~~l~g~~vgIiG-~G~iG~~~a~~l~~~G---~~V~~~~~~~~~ 114 (223)
....+.++++.|.| .|.||+.+++.|...| ++|+..+|+...
T Consensus 15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~ 60 (267)
T 1sny_A 15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ 60 (267)
T ss_dssp -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTS
T ss_pred cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhh
Confidence 44678999999998 5999999999999999 999999887653
No 475
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.70 E-value=0.008 Score=51.97 Aligned_cols=29 Identities=21% Similarity=0.277 Sum_probs=23.3
Q ss_pred CEEEEEecChHHHHHHHHHHhC---CCEEEEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF---GFIISYN 108 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~---G~~V~~~ 108 (223)
.+|||+|+|.||+.+.+.|... .++|.++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaI 33 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVI 33 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 3799999999999999998765 3466543
No 476
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.66 E-value=0.0088 Score=51.77 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=24.7
Q ss_pred CEEEEEecChHHHHHHHHHHh---C-CCEEEEEc
Q 035615 80 MQVGIVRLGNIGSEVLNRLQA---F-GFIISYNS 109 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~---~-G~~V~~~~ 109 (223)
.+|||+|+|.||+.+.+.|.. . .++|.+.+
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~ 36 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAIN 36 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEe
Confidence 489999999999999999877 3 67876543
No 477
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.64 E-value=0.043 Score=49.53 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=65.5
Q ss_pred cccCCCEEEEEecC----------hHHHHHHHHHHhCCCEEEEEcCCCCCC--C--------------CcccccChhhhh
Q 035615 75 FKLGGMQVGIVRLG----------NIGSEVLNRLQAFGFIISYNSRRKRPS--V--------------LFPYCANVYDLA 128 (223)
Q Consensus 75 ~~l~g~~vgIiG~G----------~iG~~~a~~l~~~G~~V~~~~~~~~~~--~--------------~~~~~~~l~el~ 128 (223)
..+.|++|+|+|+- .=...+++.|...|++|.+|||..... . ......++++.+
T Consensus 324 ~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (478)
T 2y0c_A 324 EDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAA 403 (478)
T ss_dssp SCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHT
T ss_pred ccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHH
Confidence 35889999999962 356788999999999999999975321 0 122345778889
Q ss_pred cCCcEEEEeccCChhhhhccCHHHH-hcCCCCcEEEEcCCCcccCHH
Q 035615 129 VNSDVLVVCCALTEQTHHIINKDVM-AELGKGGMIINVGRGALIDEK 174 (223)
Q Consensus 129 ~~aDiv~~~~p~t~~t~~li~~~~l-~~mk~ga~lIN~arg~~vd~~ 174 (223)
+.+|.|++++... +-+. ++.+.+ +.|+. .+++|+ |+- .|.+
T Consensus 404 ~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~-~~i~D~-r~~-~~~~ 445 (478)
T 2y0c_A 404 RDADALVIVTEWK-IFKS-PDFVALGRLWKT-PVIFDG-RNL-YEPE 445 (478)
T ss_dssp TTCSEEEECSCCG-GGGS-CCHHHHHTTCSS-CEEEES-SCC-SCHH
T ss_pred hCCCEEEEecCCh-Hhhc-cCHHHHHhhcCC-CEEEEC-CCC-CCHH
Confidence 9999999998764 3222 344433 45654 788887 543 4544
No 478
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=95.63 E-value=0.036 Score=46.15 Aligned_cols=60 Identities=12% Similarity=0.060 Sum_probs=43.7
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcC-CCCC---C------C-----------CcccccChhhhhcCCcEEEE
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSR-RKRP---S------V-----------LFPYCANVYDLAVNSDVLVV 136 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~-~~~~---~------~-----------~~~~~~~l~el~~~aDiv~~ 136 (223)
||+|.|.| .|.||+.+++.|...|++|.+..| ++.. . . +.....+++++++.+|+|+.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 68899999 599999999999999999998877 4321 0 0 01112356678889999987
Q ss_pred ec
Q 035615 137 CC 138 (223)
Q Consensus 137 ~~ 138 (223)
+.
T Consensus 81 ~A 82 (322)
T 2p4h_X 81 TA 82 (322)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 479
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.62 E-value=0.0092 Score=52.40 Aligned_cols=29 Identities=21% Similarity=0.250 Sum_probs=24.1
Q ss_pred CEEEEEecChHHHHHHHHHHhC---CCEEEEE
Q 035615 80 MQVGIVRLGNIGSEVLNRLQAF---GFIISYN 108 (223)
Q Consensus 80 ~~vgIiG~G~iG~~~a~~l~~~---G~~V~~~ 108 (223)
.+|||+|+|+||+.+.+.|... +++|.++
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaI 34 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAI 34 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEE
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEE
Confidence 4899999999999999998765 3777654
No 480
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=95.61 E-value=0.01 Score=48.51 Aligned_cols=61 Identities=13% Similarity=0.169 Sum_probs=46.3
Q ss_pred CEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC--C-------cccccChhhhhcCCcEEEEeccC
Q 035615 80 MQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV--L-------FPYCANVYDLAVNSDVLVVCCAL 140 (223)
Q Consensus 80 ~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~--~-------~~~~~~l~el~~~aDiv~~~~p~ 140 (223)
++|.|.|. |.||+.+++.|...|++|++.+|++.... . .....++.++++..|+|+.+...
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 68999996 99999999999999999999998765321 1 11123456778899999887643
No 481
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=95.60 E-value=0.015 Score=48.57 Aligned_cols=61 Identities=18% Similarity=0.182 Sum_probs=39.8
Q ss_pred CCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC----CcccccChhhhhcC--CcEEEEecc
Q 035615 79 GMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV----LFPYCANVYDLAVN--SDVLVVCCA 139 (223)
Q Consensus 79 g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~el~~~--aDiv~~~~p 139 (223)
+++|.|.|. |.||+.+++.|...|++|++.+|+..... +.....++.++++. .|+|+.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 689999996 99999999999999999999987654311 11122345566664 899887764
No 482
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=95.59 E-value=0.02 Score=47.27 Aligned_cols=66 Identities=17% Similarity=0.105 Sum_probs=46.5
Q ss_pred ccccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc--------ccccChhhhh-------cCCcEEEEe
Q 035615 74 GFKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVLF--------PYCANVYDLA-------VNSDVLVVC 137 (223)
Q Consensus 74 ~~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~--------~~~~~l~el~-------~~aDiv~~~ 137 (223)
..++.||++.|.|. |.||+++|+.|...|++|+..+|+....... ....++++++ ...|+++.+
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~n 88 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNN 88 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 35688999999996 7899999999999999999998876543221 1112223333 378999887
Q ss_pred cc
Q 035615 138 CA 139 (223)
Q Consensus 138 ~p 139 (223)
.-
T Consensus 89 Ag 90 (269)
T 3vtz_A 89 AG 90 (269)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 483
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=95.59 E-value=0.017 Score=47.35 Aligned_cols=65 Identities=15% Similarity=0.059 Sum_probs=45.1
Q ss_pred cccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcc-------cccChhhhh-------cCCcEEEEecc
Q 035615 75 FKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSVLFP-------YCANVYDLA-------VNSDVLVVCCA 139 (223)
Q Consensus 75 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~-------~~~~l~el~-------~~aDiv~~~~p 139 (223)
..+.+|++.|.|. |.||+.+++.|...|++|+..+|+........ ...++++++ ...|+++.+..
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg 96 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAG 96 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4588999999995 89999999999999999999888765433211 112233333 34699988764
No 484
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.58 E-value=0.011 Score=51.09 Aligned_cols=33 Identities=30% Similarity=0.358 Sum_probs=28.3
Q ss_pred CCEEEEEecChHHHHHHHHHHhCCCEEEE-EcCC
Q 035615 79 GMQVGIVRLGNIGSEVLNRLQAFGFIISY-NSRR 111 (223)
Q Consensus 79 g~~vgIiG~G~iG~~~a~~l~~~G~~V~~-~~~~ 111 (223)
-.+|||.|||+||+.+++.+..+|++|++ .|+.
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~veivainDp~ 40 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKGVKVVAVNDPF 40 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eeEEEEECCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 35899999999999999999999999876 5553
No 485
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=95.58 E-value=0.15 Score=44.31 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=68.2
Q ss_pred ccCCCEEEEEec-------ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----------------CcccccChhhhhcCC
Q 035615 76 KLGGMQVGIVRL-------GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----------------LFPYCANVYDLAVNS 131 (223)
Q Consensus 76 ~l~g~~vgIiG~-------G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----------------~~~~~~~l~el~~~a 131 (223)
+++|++++++|. .++.++....+..+|++|.+..+.+.... .+....++++.++.+
T Consensus 187 dl~g~kv~~~~~~~gd~~~~~Va~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~a 266 (359)
T 3kzn_A 187 DLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGA 266 (359)
T ss_dssp CCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTC
T ss_pred cccCCeEEEEEeecCCccccchhhhhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHHhcCC
Confidence 588999999985 36889999999999999998877532111 122357899999999
Q ss_pred cEEEEeccCCh--------h-------hhhccCHHHHhcCCCCcEEEEcC---CCcccCHH
Q 035615 132 DVLVVCCALTE--------Q-------THHIINKDVMAELGKGGMIINVG---RGALIDEK 174 (223)
Q Consensus 132 Div~~~~p~t~--------~-------t~~li~~~~l~~mk~ga~lIN~a---rg~~vd~~ 174 (223)
|+|....--.. . ....++++.++ ++++++|.-+. ||.=|+.+
T Consensus 267 Dvvyt~r~q~~r~~~~~~~~~~~~~~~~~y~v~~~l~~-~~~~ai~MHplP~~Rg~EI~~e 326 (359)
T 3kzn_A 267 DVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMA-LTNNGVFSHCLPLRRNVKATDA 326 (359)
T ss_dssp SEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHH-TSSSCEEECCSCCCBTTTBCHH
T ss_pred eEEEEEEEEEeecccchhhhHHHHHHHhccChHHHHhc-CCCCCEEECCCCCCCCCCcCHH
Confidence 99987642111 0 11246777765 56789988777 67555544
No 486
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=95.57 E-value=0.016 Score=47.30 Aligned_cols=38 Identities=13% Similarity=0.101 Sum_probs=30.1
Q ss_pred cccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCC
Q 035615 75 FKLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRK 112 (223)
Q Consensus 75 ~~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~ 112 (223)
.+++||++.|.|. |.||+++|+.|...|++|++.+|..
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 43 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG 43 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch
Confidence 4688999999995 8999999999999999999888754
No 487
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.55 E-value=0.035 Score=50.08 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=67.7
Q ss_pred ccCCCEEEEEec----------ChHHHHHHHHHHhCCCEEEEEcCCCCCCC---C-------------cccccChhhhhc
Q 035615 76 KLGGMQVGIVRL----------GNIGSEVLNRLQAFGFIISYNSRRKRPSV---L-------------FPYCANVYDLAV 129 (223)
Q Consensus 76 ~l~g~~vgIiG~----------G~iG~~~a~~l~~~G~~V~~~~~~~~~~~---~-------------~~~~~~l~el~~ 129 (223)
.+.|++|+|+|+ ..-...+++.|...|++|.+|||.-.... . .....++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 478999999995 44678899999999999999999753210 0 112356788899
Q ss_pred CCcEEEEeccCChhhhhccCHH-HHhcCCCCcEEEEcCCCcccCHHHH
Q 035615 130 NSDVLVVCCALTEQTHHIINKD-VMAELGKGGMIINVGRGALIDEKEM 176 (223)
Q Consensus 130 ~aDiv~~~~p~t~~t~~li~~~-~l~~mk~ga~lIN~arg~~vd~~al 176 (223)
.+|.|++++... +-+. ++.+ ..+.|+...+++|. |+- .|.+.+
T Consensus 412 ~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~~~~i~D~-r~~-~~~~~~ 455 (481)
T 2o3j_A 412 GAHAIVVLTEWD-EFVE-LNYSQIHNDMQHPAAIFDG-RLI-LDQKAL 455 (481)
T ss_dssp TCSEEEECSCCG-GGTT-SCHHHHHHHSCSSCEEEES-SSC-SCHHHH
T ss_pred CCCEEEEcCCcH-Hhhc-cCHHHHHHhcCCCCEEEEC-CCC-CCHHHH
Confidence 999999998754 3222 3443 44567776688886 554 465543
No 488
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=95.54 E-value=0.025 Score=48.29 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=34.2
Q ss_pred cccCCCEEEEEe-cChHHHHHHHHHHh--CCCEEEEEcCCCC
Q 035615 75 FKLGGMQVGIVR-LGNIGSEVLNRLQA--FGFIISYNSRRKR 113 (223)
Q Consensus 75 ~~l~g~~vgIiG-~G~iG~~~a~~l~~--~G~~V~~~~~~~~ 113 (223)
.++.+++|.|.| .|.||+.+++.|.. .|++|++.+|...
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 357899999997 59999999999998 8999999988654
No 489
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=95.54 E-value=0.051 Score=47.94 Aligned_cols=91 Identities=9% Similarity=0.142 Sum_probs=65.7
Q ss_pred ccCCCEEEEEec-----C---hHHHHHHHHHHhCCCEEEEEcCCCCC-CC-------------C--cccccChhhhhcCC
Q 035615 76 KLGGMQVGIVRL-----G---NIGSEVLNRLQAFGFIISYNSRRKRP-SV-------------L--FPYCANVYDLAVNS 131 (223)
Q Consensus 76 ~l~g~~vgIiG~-----G---~iG~~~a~~l~~~G~~V~~~~~~~~~-~~-------------~--~~~~~~l~el~~~a 131 (223)
.|.|++|+|+|- | ++.++.+..+..+|++|.+..|..-. .. + +....+++|.++.+
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~a 267 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA 267 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTC
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCC
Confidence 478999999973 4 78899999999999999988775322 11 1 12357899999999
Q ss_pred cEEEEeccCC--h-------------------h----------hhhccCHHHHhcCC-CCcEEEEcC
Q 035615 132 DVLVVCCALT--E-------------------Q----------THHIINKDVMAELG-KGGMIINVG 166 (223)
Q Consensus 132 Div~~~~p~t--~-------------------~----------t~~li~~~~l~~mk-~ga~lIN~a 166 (223)
|+|..-+=.. . + ....+|.+.++..+ ++++|.-+.
T Consensus 268 DvVytd~W~Smg~~~er~~~~~~~~~~~~~~~e~~~~~r~~~~~~yqVn~elm~~a~~~daifMHcL 334 (399)
T 3q98_A 268 DIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCL 334 (399)
T ss_dssp SEEEECCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTTCCBCHHHHHTSGGGCCEECCCS
T ss_pred CEEEecCccccchhhhhhhhccccchhhhhhhhhhhhHHHHHccCcEECHHHHhhcCCCCcEEECCC
Confidence 9998754000 0 0 12457899999887 489988776
No 490
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=95.54 E-value=0.02 Score=48.73 Aligned_cols=64 Identities=14% Similarity=0.039 Sum_probs=46.7
Q ss_pred ccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC----------Ccc-------cccChhhhhcC--CcEEE
Q 035615 76 KLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV----------LFP-------YCANVYDLAVN--SDVLV 135 (223)
Q Consensus 76 ~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~----------~~~-------~~~~l~el~~~--aDiv~ 135 (223)
.+.+++|.|.| .|.||+.+++.|...|++|++.+|+..... ... ...++.++++. .|+|+
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 85 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF 85 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence 36789999999 599999999999999999999988764321 111 11234455654 79988
Q ss_pred Eecc
Q 035615 136 VCCA 139 (223)
Q Consensus 136 ~~~p 139 (223)
.+..
T Consensus 86 h~A~ 89 (357)
T 1rkx_A 86 HMAA 89 (357)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 7764
No 491
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.53 E-value=0.078 Score=44.42 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=70.0
Q ss_pred cCCCEEEEEecChHHHHHHHHHHhCCCEEEEEcCCCCC--CCCcccccChhhhhcCCcEEEEeccCChh----------h
Q 035615 77 LGGMQVGIVRLGNIGSEVLNRLQAFGFIISYNSRRKRP--SVLFPYCANVYDLAVNSDVLVVCCALTEQ----------T 144 (223)
Q Consensus 77 l~g~~vgIiG~G~iG~~~a~~l~~~G~~V~~~~~~~~~--~~~~~~~~~l~el~~~aDiv~~~~p~t~~----------t 144 (223)
+.|++|.|+|.-..-...++.|...|++|.+...+... ..+.....++.+.++++|+|++-.|.... .
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccccC
Confidence 56899999999999999999999999999876432211 11223345667788899999864332110 1
Q ss_pred hhccCHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCce
Q 035615 145 HHIINKDVMAELGKGGMIINVGRGALIDEKEMLQFLVQGDIN 186 (223)
Q Consensus 145 ~~li~~~~l~~mk~ga~lIN~arg~~vd~~al~~aL~~~~i~ 186 (223)
..-++++.++.+++..++. + + +|..++.+++.+..|.
T Consensus 83 ~~~~~~~~l~~~~~l~~i~-~---G-~d~id~~~~~~~~gi~ 119 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNHCVVY-S---G-ISNTYLNQCMKKTNRT 119 (293)
T ss_dssp CCBCCHHHHHTSCTTCEEE-E---S-SCCHHHHHHHHHHTCE
T ss_pred CccchHHHHHhCCCCCEEE-e---c-CCCHHHHHHHHHcCCe
Confidence 1236788999998877765 2 2 3556665566665565
No 492
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.53 E-value=0.0072 Score=51.42 Aligned_cols=84 Identities=18% Similarity=0.112 Sum_probs=58.5
Q ss_pred CCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc---c---cChhhhh-----cCCcEEEEeccC
Q 035615 78 GGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY---C---ANVYDLA-----VNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~---~---~~l~el~-----~~aDiv~~~~p~ 140 (223)
.|++|.|.|. |.||+.+++.++..|++|++.+++.+..+ +... . .++.+.+ ...|+++.+...
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 4899999997 99999999999999999999887643211 1111 1 2333322 247888887752
Q ss_pred ChhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 141 TEQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 141 t~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
+ + -...++.++++..++.++-
T Consensus 225 -~-~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 225 -E-F----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp -H-H----HHHHHTTEEEEEEEEECCC
T ss_pred -H-H----HHHHHHHHhcCCEEEEEec
Confidence 1 1 2556778889888888874
No 493
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.53 E-value=0.0082 Score=51.59 Aligned_cols=84 Identities=17% Similarity=0.122 Sum_probs=55.4
Q ss_pred CCCEEEEEecChHHHHHHHHHHhCCC-EEEEEcCCCCCCC-----Cccc-----ccChhh----hhc--CCcEEEEeccC
Q 035615 78 GGMQVGIVRLGNIGSEVLNRLQAFGF-IISYNSRRKRPSV-----LFPY-----CANVYD----LAV--NSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~G~iG~~~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~-----~~~l~e----l~~--~aDiv~~~~p~ 140 (223)
.|.+|.|+|.|.+|...++.++..|+ +|++.++++++.+ ++.. ..++.+ +.. ..|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 48899999999999999999999999 7999988764321 2211 112222 221 47999887763
Q ss_pred ChhhhhccCHHHHhcCCCCcEEEEcC
Q 035615 141 TEQTHHIINKDVMAELGKGGMIINVG 166 (223)
Q Consensus 141 t~~t~~li~~~~l~~mk~ga~lIN~a 166 (223)
.+.. ...++.++++..++.++
T Consensus 246 ~~~~-----~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VHTF-----AQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTHH-----HHHHHHEEEEEEEEECC
T ss_pred hHHH-----HHHHHHHhcCCEEEEec
Confidence 2211 34555666666666654
No 494
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.53 E-value=0.0076 Score=51.54 Aligned_cols=84 Identities=17% Similarity=0.235 Sum_probs=58.9
Q ss_pred CCCEEEEEecC-hHHHHHHHHHHhCCCEEEEEcCCCCCCC-----Cccc-----ccChhh----hh--cCCcEEEEeccC
Q 035615 78 GGMQVGIVRLG-NIGSEVLNRLQAFGFIISYNSRRKRPSV-----LFPY-----CANVYD----LA--VNSDVLVVCCAL 140 (223)
Q Consensus 78 ~g~~vgIiG~G-~iG~~~a~~l~~~G~~V~~~~~~~~~~~-----~~~~-----~~~l~e----l~--~~aDiv~~~~p~ 140 (223)
.|++|.|+|.| .||...++.++..|++|++.+++.++.+ ++.. ..++.+ +. ...|+++.++..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 48899999997 9999999999999999999988766432 2111 112222 21 257999887752
Q ss_pred ChhhhhccCHHHHhcCCCCcEEEEcCC
Q 035615 141 TEQTHHIINKDVMAELGKGGMIINVGR 167 (223)
Q Consensus 141 t~~t~~li~~~~l~~mk~ga~lIN~ar 167 (223)
+.+ .+.+..++++..++.++-
T Consensus 224 -~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 224 -PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp -HHH-----HHHHHTEEEEEEEEECCC
T ss_pred -hhH-----HHHHHHhcCCCEEEEEee
Confidence 222 234577899999999874
No 495
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=95.51 E-value=0.046 Score=45.99 Aligned_cols=60 Identities=12% Similarity=0.073 Sum_probs=44.5
Q ss_pred CCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCC------------Cc-------ccccChhhhhcCCcEEEEec
Q 035615 79 GMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSV------------LF-------PYCANVYDLAVNSDVLVVCC 138 (223)
Q Consensus 79 g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~------------~~-------~~~~~l~el~~~aDiv~~~~ 138 (223)
+|+|.|.| .|-||+.+++.|...|++|.+..|+..... .. ....+++++++.+|+|+.+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 78999999 699999999999999999988766543210 11 11234667888899887654
No 496
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=95.49 E-value=0.035 Score=45.61 Aligned_cols=64 Identities=17% Similarity=0.045 Sum_probs=46.2
Q ss_pred ccCCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCCCc-------ccccChhhhhc-------CCcEEEEecc
Q 035615 76 KLGGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSVLF-------PYCANVYDLAV-------NSDVLVVCCA 139 (223)
Q Consensus 76 ~l~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~-------~~~~~l~el~~-------~aDiv~~~~p 139 (223)
++.||++.|.| .|.||+.+++.|...|++|++.+|+....... ....+++++++ ..|+|+.+..
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag 83 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAG 83 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 47899999999 58999999999999999999988876432111 11122333333 6899988764
No 497
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=95.49 E-value=0.021 Score=44.72 Aligned_cols=62 Identities=16% Similarity=0.116 Sum_probs=44.9
Q ss_pred CCCEEEEEe-cChHHHHHHHHHHhCCC--EEEEEcCCCCCCC-Ccc-------cccChhhhhcCCcEEEEeccCC
Q 035615 78 GGMQVGIVR-LGNIGSEVLNRLQAFGF--IISYNSRRKRPSV-LFP-------YCANVYDLAVNSDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG-~G~iG~~~a~~l~~~G~--~V~~~~~~~~~~~-~~~-------~~~~l~el~~~aDiv~~~~p~t 141 (223)
.+++|.|.| .|.||+.+++.|...|. +|++.+|++.... ... ...++.+++ .|+|+.+....
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~ 76 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTT 76 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh--hcEEEECeeec
Confidence 478999999 79999999999999998 9999988765411 111 112333344 89998887654
No 498
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=95.47 E-value=0.089 Score=42.74 Aligned_cols=39 Identities=13% Similarity=0.065 Sum_probs=34.5
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHHhCCCEEEEEcCCCCC
Q 035615 76 KLGGMQVGIVRL-GNIGSEVLNRLQAFGFIISYNSRRKRP 114 (223)
Q Consensus 76 ~l~g~~vgIiG~-G~iG~~~a~~l~~~G~~V~~~~~~~~~ 114 (223)
+++||++.|.|. |.||+++|+.|...|++|++.+|+...
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 43 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPA 43 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 478999999995 899999999999999999999887654
No 499
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=95.47 E-value=0.023 Score=47.44 Aligned_cols=62 Identities=19% Similarity=0.130 Sum_probs=46.9
Q ss_pred CCCEEEEEe-cChHHHHHHHHHHhCCCEEEEEcCCCCCCCCcccccChhhhhc--CCcEEEEeccCC
Q 035615 78 GGMQVGIVR-LGNIGSEVLNRLQAFGFIISYNSRRKRPSVLFPYCANVYDLAV--NSDVLVVCCALT 141 (223)
Q Consensus 78 ~g~~vgIiG-~G~iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~el~~--~aDiv~~~~p~t 141 (223)
.+++|.|.| .|.||+.+++.|...|++|++.+++... +.....++.++++ ..|+|+.+....
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--D~~d~~~~~~~~~~~~~d~vih~a~~~ 66 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL--NLLDSRAVHDFFASERIDQVYLAAAKV 66 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTC--CTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccC--CccCHHHHHHHHHhcCCCEEEEcCeec
Confidence 367999999 5999999999999999999988775421 2222345667787 899998776543
No 500
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=95.44 E-value=0.031 Score=45.55 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=34.6
Q ss_pred ccccCCCEEEEEec---ChHHHHHHHHHHhCCCEEEEEcCCC
Q 035615 74 GFKLGGMQVGIVRL---GNIGSEVLNRLQAFGFIISYNSRRK 112 (223)
Q Consensus 74 ~~~l~g~~vgIiG~---G~iG~~~a~~l~~~G~~V~~~~~~~ 112 (223)
...+.+|++.|.|. |.||+.+|+.|...|++|++.+|+.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 45689999999995 5899999999999999999888763
Done!