Query 035617
Match_columns 422
No_of_seqs 243 out of 2119
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 04:36:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035617.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035617hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02872 triacylglycerol lipas 100.0 4.4E-55 9.6E-60 420.2 32.1 357 55-420 30-392 (395)
2 KOG2624 Triglyceride lipase-ch 100.0 7.4E-55 1.6E-59 411.7 26.4 351 55-418 34-399 (403)
3 PLN02385 hydrolase; alpha/beta 100.0 2.9E-28 6.3E-33 234.4 23.1 280 66-420 58-348 (349)
4 KOG1455 Lysophospholipase [Lip 100.0 7.2E-28 1.6E-32 213.9 20.4 275 64-417 22-312 (313)
5 PLN02298 hydrolase, alpha/beta 100.0 9.5E-27 2.1E-31 222.4 26.6 280 63-419 26-319 (330)
6 PHA02857 monoglyceride lipase; 100.0 1E-26 2.2E-31 216.5 21.8 260 74-418 5-274 (276)
7 COG2267 PldB Lysophospholipase 100.0 6.9E-27 1.5E-31 217.8 19.5 276 70-419 10-296 (298)
8 PRK10749 lysophospholipase L2; 100.0 1.8E-26 4E-31 220.0 22.7 136 70-224 31-167 (330)
9 KOG4178 Soluble epoxide hydrol 99.9 5.1E-27 1.1E-31 211.9 17.2 290 71-418 23-321 (322)
10 PLN02652 hydrolase; alpha/beta 99.9 1.8E-25 3.8E-30 216.3 29.1 272 69-419 110-389 (395)
11 PRK00870 haloalkane dehalogena 99.9 1.2E-26 2.6E-31 218.9 20.2 277 70-417 22-301 (302)
12 TIGR02240 PHA_depoly_arom poly 99.9 2.6E-26 5.6E-31 213.8 22.1 256 77-419 9-268 (276)
13 PLN02824 hydrolase, alpha/beta 99.9 2.2E-26 4.8E-31 216.3 20.9 273 78-417 16-294 (294)
14 KOG4391 Predicted alpha/beta h 99.9 4.5E-27 9.7E-32 197.2 13.3 231 60-417 45-282 (300)
15 PRK03592 haloalkane dehalogena 99.9 4.4E-26 9.4E-31 214.4 19.1 271 77-418 14-290 (295)
16 PLN02578 hydrolase 99.9 8.6E-25 1.9E-29 210.5 23.5 257 100-415 86-353 (354)
17 TIGR03343 biphenyl_bphD 2-hydr 99.9 5.7E-25 1.2E-29 205.3 21.5 249 100-416 30-282 (282)
18 PRK13604 luxD acyl transferase 99.9 4.6E-25 1E-29 201.8 18.5 135 69-226 9-144 (307)
19 PLN02511 hydrolase 99.9 1.6E-24 3.5E-29 210.3 22.0 287 66-418 68-366 (388)
20 KOG4409 Predicted hydrolase/ac 99.9 3.6E-25 7.7E-30 200.4 16.0 304 59-417 55-364 (365)
21 PLN02679 hydrolase, alpha/beta 99.9 1.8E-24 3.9E-29 208.6 21.6 259 99-417 87-357 (360)
22 PLN02965 Probable pheophorbida 99.9 1.3E-24 2.9E-29 199.9 17.4 241 101-417 4-253 (255)
23 PRK03204 haloalkane dehalogena 99.9 4.2E-24 9.1E-29 199.7 19.9 124 67-223 12-136 (286)
24 TIGR03611 RutD pyrimidine util 99.9 1E-23 2.2E-28 193.3 21.0 243 98-416 11-257 (257)
25 TIGR01836 PHA_synth_III_C poly 99.9 2.6E-23 5.6E-28 200.0 24.2 278 98-417 60-350 (350)
26 PRK10673 acyl-CoA esterase; Pr 99.9 9.5E-24 2.1E-28 194.0 20.3 234 98-417 14-255 (255)
27 PLN03087 BODYGUARD 1 domain co 99.9 4.6E-24 9.9E-29 209.1 18.5 126 75-225 181-311 (481)
28 PRK06489 hypothetical protein; 99.9 4.8E-23 1E-27 198.9 24.1 112 100-223 69-189 (360)
29 COG1647 Esterase/lipase [Gener 99.9 6.5E-24 1.4E-28 179.7 15.6 222 100-416 15-243 (243)
30 KOG1454 Predicted hydrolase/ac 99.9 2.7E-23 5.8E-28 195.6 21.0 287 70-418 26-325 (326)
31 TIGR01607 PST-A Plasmodium sub 99.9 3.7E-23 8.1E-28 196.9 21.6 273 74-416 2-332 (332)
32 TIGR02427 protocat_pcaD 3-oxoa 99.9 3E-23 6.4E-28 188.9 20.1 236 99-415 12-251 (251)
33 TIGR03056 bchO_mg_che_rel puta 99.9 1.8E-23 4E-28 194.3 18.7 262 76-415 12-278 (278)
34 TIGR01250 pro_imino_pep_2 prol 99.9 2.6E-23 5.5E-28 193.6 19.3 123 76-223 8-131 (288)
35 PLN03084 alpha/beta hydrolase 99.9 1.2E-22 2.5E-27 195.5 24.0 124 74-224 109-233 (383)
36 PRK10349 carboxylesterase BioH 99.9 3.8E-23 8.3E-28 190.3 19.1 235 101-416 14-255 (256)
37 PRK07581 hypothetical protein; 99.9 4.1E-23 8.8E-28 198.0 19.8 280 100-419 41-338 (339)
38 TIGR01738 bioH putative pimelo 99.9 6.3E-23 1.4E-27 186.1 18.8 236 100-414 4-245 (245)
39 PRK10985 putative hydrolase; P 99.9 9E-23 1.9E-27 194.1 19.5 139 68-225 30-170 (324)
40 PLN02894 hydrolase, alpha/beta 99.9 8.2E-22 1.8E-26 192.2 25.1 108 99-225 104-213 (402)
41 TIGR03695 menH_SHCHC 2-succiny 99.9 1.3E-22 2.8E-27 184.3 18.1 105 100-224 1-106 (251)
42 PRK05077 frsA fermentation/res 99.9 7E-22 1.5E-26 192.8 24.0 140 58-223 157-300 (414)
43 PRK11126 2-succinyl-6-hydroxy- 99.9 4.4E-22 9.5E-27 181.5 19.4 100 100-223 2-102 (242)
44 PF12697 Abhydrolase_6: Alpha/ 99.9 1.7E-22 3.6E-27 180.8 15.9 103 103-226 1-104 (228)
45 PRK14875 acetoin dehydrogenase 99.9 1.1E-21 2.4E-26 190.4 20.4 240 99-417 130-371 (371)
46 PLN02211 methyl indole-3-aceta 99.9 1.4E-21 3E-26 181.2 19.2 104 99-222 17-121 (273)
47 TIGR01392 homoserO_Ac_trn homo 99.9 2.5E-21 5.3E-26 186.4 21.4 132 78-225 14-164 (351)
48 TIGR01249 pro_imino_pep_1 prol 99.9 3.9E-21 8.5E-26 181.6 21.0 124 71-223 6-130 (306)
49 PRK08775 homoserine O-acetyltr 99.9 6.7E-21 1.5E-25 182.8 22.8 117 78-224 44-174 (343)
50 PRK00175 metX homoserine O-ace 99.9 1.5E-20 3.2E-25 182.5 23.8 120 99-225 47-184 (379)
51 TIGR01838 PHA_synth_I poly(R)- 99.9 5.1E-21 1.1E-25 189.4 20.3 266 98-403 186-461 (532)
52 PRK05855 short chain dehydroge 99.9 1.9E-20 4.1E-25 192.7 20.2 122 73-221 6-129 (582)
53 COG0429 Predicted hydrolase of 99.9 3E-20 6.4E-25 167.7 18.6 282 66-419 46-342 (345)
54 PRK10566 esterase; Provisional 99.9 3.8E-20 8.3E-25 169.5 19.9 122 82-219 13-137 (249)
55 TIGR03100 hydr1_PEP hydrolase, 99.9 2.8E-20 6.1E-25 172.6 18.9 128 72-224 5-135 (274)
56 KOG1552 Predicted alpha/beta h 99.8 3.1E-20 6.8E-25 162.3 16.5 215 68-419 34-254 (258)
57 PLN02980 2-oxoglutarate decarb 99.8 9.7E-20 2.1E-24 203.5 24.1 261 99-418 1370-1640(1655)
58 KOG1838 Alpha/beta hydrolase [ 99.8 4.8E-19 1E-23 165.8 20.3 287 66-417 90-388 (409)
59 KOG2984 Predicted hydrolase [G 99.8 1E-19 2.2E-24 151.5 13.2 243 78-417 29-276 (277)
60 PRK07868 acyl-CoA synthetase; 99.8 8E-19 1.7E-23 189.8 23.4 281 98-419 65-363 (994)
61 KOG2382 Predicted alpha/beta h 99.8 9.4E-19 2E-23 158.6 16.3 255 98-418 50-314 (315)
62 COG1506 DAP2 Dipeptidyl aminop 99.8 2.3E-18 5E-23 176.7 17.8 250 65-419 361-618 (620)
63 TIGR03101 hydr2_PEP hydrolase, 99.8 1.7E-18 3.7E-23 157.9 13.8 135 71-226 2-137 (266)
64 PRK06765 homoserine O-acetyltr 99.8 4.6E-17 1E-21 157.1 22.9 279 99-416 55-387 (389)
65 PF12695 Abhydrolase_5: Alpha/ 99.8 1.9E-18 4.1E-23 144.4 11.5 91 102-221 1-93 (145)
66 TIGR01839 PHA_synth_II poly(R) 99.8 6.4E-17 1.4E-21 158.6 21.9 260 98-400 213-484 (560)
67 PF00561 Abhydrolase_1: alpha/ 99.8 1.2E-17 2.6E-22 150.3 14.1 77 134-222 1-78 (230)
68 PRK11071 esterase YqiA; Provis 99.8 3.9E-17 8.5E-22 142.7 16.1 90 101-224 2-94 (190)
69 PF00326 Peptidase_S9: Prolyl 99.7 1.8E-17 3.8E-22 148.2 12.6 199 124-420 5-212 (213)
70 PF05448 AXE1: Acetyl xylan es 99.7 2.2E-16 4.8E-21 148.1 16.8 250 66-417 53-320 (320)
71 PLN02442 S-formylglutathione h 99.7 2.3E-15 4.9E-20 140.2 20.0 146 70-224 19-179 (283)
72 PF06500 DUF1100: Alpha/beta h 99.7 2.7E-15 5.8E-20 141.9 17.3 142 57-224 153-297 (411)
73 KOG2564 Predicted acetyltransf 99.7 2.2E-15 4.7E-20 132.2 13.5 108 98-221 72-180 (343)
74 PLN00021 chlorophyllase 99.6 6.3E-15 1.4E-19 138.2 17.3 103 98-223 50-166 (313)
75 COG3458 Acetyl esterase (deace 99.6 7.4E-15 1.6E-19 128.4 15.9 140 69-223 56-210 (321)
76 TIGR02821 fghA_ester_D S-formy 99.6 3.2E-14 6.8E-19 132.2 21.3 146 69-224 13-174 (275)
77 TIGR01849 PHB_depoly_PhaZ poly 99.6 9.1E-15 2E-19 139.6 17.4 281 100-417 102-406 (406)
78 PRK11460 putative hydrolase; P 99.6 8.7E-15 1.9E-19 132.2 15.3 115 98-221 14-136 (232)
79 COG3243 PhaC Poly(3-hydroxyalk 99.6 4E-14 8.7E-19 131.9 19.7 281 98-417 105-399 (445)
80 TIGR01840 esterase_phb esteras 99.6 1.3E-14 2.8E-19 129.5 15.6 116 98-223 11-130 (212)
81 PF01738 DLH: Dienelactone hyd 99.6 2.5E-15 5.4E-20 134.8 10.6 190 98-418 12-218 (218)
82 COG4757 Predicted alpha/beta h 99.6 5.4E-15 1.2E-19 126.3 11.4 264 72-414 8-280 (281)
83 PRK10162 acetyl esterase; Prov 99.6 1E-13 2.2E-18 131.3 20.8 128 68-225 56-197 (318)
84 PRK10115 protease 2; Provision 99.6 7.6E-14 1.6E-18 144.4 20.6 147 65-225 412-561 (686)
85 KOG4667 Predicted esterase [Li 99.6 1.4E-14 3E-19 122.4 11.9 107 99-222 32-138 (269)
86 COG2945 Predicted hydrolase of 99.6 3.1E-14 6.7E-19 118.6 12.3 130 70-222 5-136 (210)
87 COG0412 Dienelactone hydrolase 99.6 2.1E-13 4.6E-18 122.8 17.9 212 70-419 3-235 (236)
88 COG0596 MhpC Predicted hydrola 99.5 7.1E-13 1.5E-17 120.4 18.0 101 100-224 21-124 (282)
89 COG2021 MET2 Homoserine acetyl 99.5 2.8E-12 6E-17 118.4 21.4 278 99-416 50-367 (368)
90 PF06342 DUF1057: Alpha/beta h 99.5 4.2E-12 9E-17 113.0 20.6 132 70-226 7-140 (297)
91 TIGR00976 /NonD putative hydro 99.5 1.8E-13 3.8E-18 139.4 11.3 130 74-224 1-133 (550)
92 PF12715 Abhydrolase_7: Abhydr 99.5 4.1E-13 8.8E-18 125.0 11.0 151 63-221 82-258 (390)
93 PF02230 Abhydrolase_2: Phosph 99.5 9.1E-13 2E-17 117.9 12.8 57 354-417 156-215 (216)
94 PF04083 Abhydro_lipase: Parti 99.4 3.6E-13 7.7E-18 93.4 6.9 61 59-119 2-62 (63)
95 PF02273 Acyl_transf_2: Acyl t 99.4 9.7E-12 2.1E-16 107.5 17.1 130 70-223 3-134 (294)
96 cd00707 Pancreat_lipase_like P 99.4 2.4E-13 5.1E-18 125.8 7.3 109 98-223 34-147 (275)
97 TIGR03230 lipo_lipase lipoprot 99.4 5.7E-13 1.2E-17 128.8 10.2 111 97-224 38-155 (442)
98 PF12146 Hydrolase_4: Putative 99.4 4.2E-13 9E-18 98.7 6.3 78 79-177 1-78 (79)
99 KOG2931 Differentiation-relate 99.4 2.1E-10 4.5E-15 102.1 22.1 282 68-417 21-306 (326)
100 COG3208 GrsT Predicted thioest 99.4 6.1E-12 1.3E-16 109.8 12.2 220 98-416 5-235 (244)
101 PF03096 Ndr: Ndr family; Int 99.3 7.1E-11 1.5E-15 106.5 17.0 274 71-416 1-278 (283)
102 COG0400 Predicted esterase [Ge 99.3 6.4E-11 1.4E-15 103.5 14.3 112 98-223 16-134 (207)
103 PRK05371 x-prolyl-dipeptidyl a 99.3 5.8E-11 1.3E-15 123.9 16.2 88 124-224 270-374 (767)
104 TIGR03502 lipase_Pla1_cef extr 99.3 1.3E-11 2.8E-16 126.5 11.0 129 71-206 419-575 (792)
105 PF02129 Peptidase_S15: X-Pro 99.3 1.1E-11 2.3E-16 115.0 9.4 132 78-225 1-138 (272)
106 PF08538 DUF1749: Protein of u 99.2 2.1E-11 4.5E-16 111.1 8.7 111 99-229 32-154 (303)
107 KOG2100 Dipeptidyl aminopeptid 99.2 2.5E-10 5.4E-15 118.9 15.9 256 58-421 486-751 (755)
108 PF07859 Abhydrolase_3: alpha/ 99.2 2.3E-10 5E-15 101.9 13.4 103 103-225 1-112 (211)
109 PF12740 Chlorophyllase2: Chlo 99.2 2.9E-10 6.2E-15 101.8 13.7 103 98-223 15-131 (259)
110 PF05728 UPF0227: Uncharacteri 99.2 7.1E-10 1.5E-14 95.7 14.8 89 103-225 2-93 (187)
111 PF00975 Thioesterase: Thioest 99.2 5E-10 1.1E-14 101.1 13.9 101 101-222 1-103 (229)
112 KOG3043 Predicted hydrolase re 99.2 1.6E-10 3.4E-15 99.0 9.4 167 123-418 57-241 (242)
113 PF05677 DUF818: Chlamydia CHL 99.1 1.5E-08 3.3E-13 92.8 21.7 121 69-208 112-237 (365)
114 PF07224 Chlorophyllase: Chlor 99.1 1.9E-09 4.1E-14 94.5 13.6 105 98-225 44-159 (307)
115 PF06821 Ser_hydrolase: Serine 99.1 2.7E-10 5.8E-15 97.3 7.5 87 103-223 1-91 (171)
116 KOG2281 Dipeptidyl aminopeptid 99.1 4.6E-09 1E-13 102.3 16.4 142 70-225 614-764 (867)
117 KOG2565 Predicted hydrolases o 99.1 6.4E-09 1.4E-13 95.3 15.5 123 74-219 127-260 (469)
118 PF10230 DUF2305: Uncharacteri 99.0 4.4E-09 9.5E-14 96.7 13.8 114 100-223 2-122 (266)
119 PF06057 VirJ: Bacterial virul 99.0 6.4E-09 1.4E-13 88.2 12.2 101 102-223 4-107 (192)
120 COG4188 Predicted dienelactone 99.0 2.5E-09 5.4E-14 99.3 10.6 101 98-208 69-181 (365)
121 PF08840 BAAT_C: BAAT / Acyl-C 99.0 9.3E-10 2E-14 97.8 7.1 71 345-419 109-212 (213)
122 KOG1515 Arylacetamide deacetyl 99.0 8.2E-08 1.8E-12 90.1 20.0 134 73-229 65-213 (336)
123 PF07819 PGAP1: PGAP1-like pro 99.0 2.4E-09 5.3E-14 95.8 9.1 106 99-223 3-123 (225)
124 COG0657 Aes Esterase/lipase [L 99.0 3E-08 6.5E-13 93.9 16.7 111 98-227 77-195 (312)
125 KOG4627 Kynurenine formamidase 98.9 1.9E-08 4.2E-13 84.9 13.1 105 99-223 66-172 (270)
126 PF09752 DUF2048: Uncharacteri 98.9 4.6E-08 1E-12 90.7 16.8 117 98-222 90-209 (348)
127 PF10503 Esterase_phd: Esteras 98.9 1.9E-08 4.1E-13 89.0 12.9 110 98-224 14-133 (220)
128 COG3571 Predicted hydrolase of 98.9 1.9E-08 4.1E-13 81.5 11.6 107 99-221 13-122 (213)
129 KOG3975 Uncharacterized conser 98.9 1.6E-07 3.4E-12 81.9 16.4 115 98-222 27-146 (301)
130 KOG1553 Predicted alpha/beta h 98.9 1.6E-08 3.5E-13 91.7 10.0 130 70-225 215-347 (517)
131 PF01674 Lipase_2: Lipase (cla 98.8 4.9E-09 1.1E-13 92.6 6.2 90 101-206 2-95 (219)
132 PF03959 FSH1: Serine hydrolas 98.8 6.2E-09 1.3E-13 92.7 6.7 122 99-222 3-144 (212)
133 PF03403 PAF-AH_p_II: Platelet 98.8 1.7E-08 3.7E-13 97.3 10.0 116 99-223 99-262 (379)
134 KOG2551 Phospholipase/carboxyh 98.8 6.2E-08 1.3E-12 83.3 12.1 60 349-419 161-222 (230)
135 PF06028 DUF915: Alpha/beta hy 98.8 1E-07 2.2E-12 86.4 12.5 118 98-222 9-142 (255)
136 PF03583 LIP: Secretory lipase 98.7 2.2E-07 4.7E-12 86.6 13.4 63 353-420 219-284 (290)
137 COG2936 Predicted acyl esteras 98.7 6.2E-08 1.3E-12 95.5 9.6 139 65-224 15-160 (563)
138 PF12048 DUF3530: Protein of u 98.6 8.1E-06 1.7E-10 76.7 20.5 144 69-223 62-229 (310)
139 COG3545 Predicted esterase of 98.6 1.3E-06 2.8E-11 72.6 12.9 55 354-416 118-178 (181)
140 PLN02733 phosphatidylcholine-s 98.6 1.7E-07 3.6E-12 91.7 9.0 88 123-223 111-201 (440)
141 PF00151 Lipase: Lipase; Inte 98.5 2.4E-08 5.1E-13 94.4 1.5 114 96-224 67-188 (331)
142 PF11339 DUF3141: Protein of u 98.5 3.7E-05 8.1E-10 74.4 22.4 107 98-222 66-174 (581)
143 PF05990 DUF900: Alpha/beta hy 98.5 2.8E-07 6.2E-12 82.9 7.8 114 98-225 16-139 (233)
144 COG4099 Predicted peptidase [G 98.5 1.3E-06 2.8E-11 78.2 11.2 42 179-222 259-303 (387)
145 KOG3847 Phospholipase A2 (plat 98.5 2.9E-06 6.3E-11 76.5 12.4 117 96-222 114-274 (399)
146 PRK04940 hypothetical protein; 98.4 1.4E-05 2.9E-10 67.9 14.9 53 355-416 126-179 (180)
147 KOG4840 Predicted hydrolases o 98.4 6.5E-06 1.4E-10 70.7 12.8 111 100-226 36-147 (299)
148 COG3319 Thioesterase domains o 98.3 1.1E-06 2.4E-11 79.4 7.0 102 101-224 1-104 (257)
149 KOG3101 Esterase D [General fu 98.3 2.3E-06 5E-11 72.8 7.7 125 85-225 32-178 (283)
150 KOG2237 Predicted serine prote 98.3 2.3E-05 5E-10 77.3 15.5 143 65-225 437-586 (712)
151 COG1505 Serine proteases of th 98.3 2.9E-05 6.2E-10 76.3 15.4 141 66-225 391-537 (648)
152 cd00312 Esterase_lipase Estera 98.2 1.4E-05 3.1E-10 80.7 11.9 129 76-223 75-213 (493)
153 PTZ00472 serine carboxypeptida 98.2 2.1E-05 4.7E-10 78.1 12.6 134 79-225 60-218 (462)
154 COG1075 LipA Predicted acetylt 98.2 2.1E-06 4.6E-11 81.7 5.2 103 100-224 59-165 (336)
155 COG4782 Uncharacterized protei 98.2 8.2E-06 1.8E-10 75.6 8.7 115 98-226 114-237 (377)
156 PRK10252 entF enterobactin syn 98.2 4.3E-06 9.3E-11 94.5 8.1 101 100-222 1068-1170(1296)
157 PF05705 DUF829: Eukaryotic pr 98.1 3.5E-05 7.7E-10 70.0 12.3 58 354-414 179-240 (240)
158 COG4814 Uncharacterized protei 98.1 7.2E-05 1.6E-09 65.9 13.3 116 100-222 45-175 (288)
159 KOG2112 Lysophospholipase [Lip 98.1 4.3E-05 9.4E-10 65.6 11.6 56 354-416 145-203 (206)
160 PF10340 DUF2424: Protein of u 98.0 7E-05 1.5E-09 71.0 12.6 113 98-226 120-238 (374)
161 COG3509 LpqC Poly(3-hydroxybut 98.0 6.1E-05 1.3E-09 68.0 11.1 124 78-221 43-177 (312)
162 COG1770 PtrB Protease II [Amin 98.0 0.00043 9.3E-09 69.1 18.0 142 66-225 416-564 (682)
163 KOG3724 Negative regulator of 98.0 8.2E-05 1.8E-09 75.1 12.5 129 75-222 63-219 (973)
164 COG2272 PnbA Carboxylesterase 98.0 4.7E-05 1E-09 73.7 9.9 136 74-224 74-218 (491)
165 PF00756 Esterase: Putative es 97.9 7.8E-06 1.7E-10 74.8 4.0 48 175-224 101-151 (251)
166 PF05057 DUF676: Putative seri 97.9 1.3E-05 2.8E-10 71.6 5.1 88 99-206 3-98 (217)
167 PLN03016 sinapoylglucose-malat 97.9 0.0014 3.1E-08 64.5 19.0 135 78-225 48-212 (433)
168 KOG3253 Predicted alpha/beta h 97.8 6.2E-05 1.3E-09 73.7 8.3 58 354-417 305-374 (784)
169 PRK10439 enterobactin/ferric e 97.8 0.00021 4.5E-09 69.9 11.8 108 98-223 207-323 (411)
170 COG1073 Hydrolases of the alph 97.8 0.0002 4.4E-09 66.6 11.4 66 347-418 227-298 (299)
171 COG0627 Predicted esterase [Ge 97.8 8E-05 1.7E-09 69.7 8.1 123 98-226 52-190 (316)
172 COG3150 Predicted esterase [Ge 97.8 0.00019 4.2E-09 59.1 8.7 90 103-224 2-92 (191)
173 PF05577 Peptidase_S28: Serine 97.7 0.0001 2.2E-09 73.1 7.8 115 101-223 29-148 (434)
174 KOG2183 Prolylcarboxypeptidase 97.5 0.0021 4.6E-08 60.7 13.3 123 100-227 80-207 (492)
175 KOG1282 Serine carboxypeptidas 97.5 0.013 2.7E-07 57.6 19.0 140 74-226 51-216 (454)
176 PF00135 COesterase: Carboxyle 97.5 0.00037 8E-09 71.1 8.5 114 99-223 124-245 (535)
177 smart00824 PKS_TE Thioesterase 97.5 0.0003 6.5E-09 61.8 6.8 84 123-222 16-101 (212)
178 PF02450 LCAT: Lecithin:choles 97.4 0.00054 1.2E-08 66.7 7.8 83 123-223 68-160 (389)
179 COG4553 DepA Poly-beta-hydroxy 97.3 0.003 6.6E-08 56.8 11.0 283 98-420 101-410 (415)
180 PF11288 DUF3089: Protein of u 97.3 0.00098 2.1E-08 58.0 7.6 68 134-206 46-115 (207)
181 KOG2541 Palmitoyl protein thio 97.3 0.0017 3.7E-08 57.9 9.1 101 101-222 24-127 (296)
182 PF04301 DUF452: Protein of un 97.2 0.0048 1E-07 54.2 11.4 76 100-222 11-89 (213)
183 PLN02517 phosphatidylcholine-s 97.2 0.0011 2.3E-08 66.1 7.8 90 123-222 159-262 (642)
184 PF05576 Peptidase_S37: PS-10 97.2 0.0031 6.6E-08 59.9 10.4 104 98-221 61-167 (448)
185 PF10142 PhoPQ_related: PhoPQ- 97.1 0.0071 1.5E-07 57.7 11.6 55 354-417 263-320 (367)
186 PF00450 Peptidase_S10: Serine 97.1 0.004 8.8E-08 61.3 10.4 140 74-225 18-183 (415)
187 PLN02606 palmitoyl-protein thi 97.0 0.0025 5.5E-08 58.5 7.6 102 101-222 27-131 (306)
188 COG3946 VirJ Type IV secretory 96.9 0.0033 7.1E-08 59.4 7.8 85 100-205 260-345 (456)
189 PF11144 DUF2920: Protein of u 96.9 0.0044 9.6E-08 59.1 8.7 116 98-222 33-218 (403)
190 PF08386 Abhydrolase_4: TAP-li 96.8 0.0035 7.6E-08 48.6 6.1 56 354-416 35-93 (103)
191 PLN02633 palmitoyl protein thi 96.8 0.0051 1.1E-07 56.6 7.8 103 100-222 25-130 (314)
192 KOG1551 Uncharacterized conser 96.8 0.15 3.3E-06 45.6 16.2 56 356-418 309-367 (371)
193 cd00741 Lipase Lipase. Lipase 96.7 0.0035 7.6E-08 52.5 5.6 53 171-223 12-67 (153)
194 KOG2182 Hydrolytic enzymes of 96.6 0.021 4.5E-07 55.6 10.4 121 98-224 84-208 (514)
195 COG2939 Carboxypeptidase C (ca 96.5 0.013 2.8E-07 57.3 9.0 127 97-233 98-247 (498)
196 PLN02213 sinapoylglucose-malat 96.5 0.11 2.4E-06 49.2 15.0 61 353-416 233-316 (319)
197 COG2819 Predicted hydrolase of 96.5 0.06 1.3E-06 48.6 12.2 59 165-226 116-175 (264)
198 PLN02209 serine carboxypeptida 96.5 0.057 1.2E-06 53.3 13.1 140 74-225 46-214 (437)
199 PF02089 Palm_thioest: Palmito 96.4 0.0031 6.7E-08 57.5 3.6 106 100-222 5-115 (279)
200 PF01764 Lipase_3: Lipase (cla 96.3 0.0082 1.8E-07 49.3 5.4 36 171-206 48-84 (140)
201 PF11187 DUF2974: Protein of u 96.3 0.0054 1.2E-07 54.7 4.4 50 176-225 74-125 (224)
202 KOG3967 Uncharacterized conser 96.1 0.063 1.4E-06 46.4 9.7 114 98-222 99-226 (297)
203 cd00519 Lipase_3 Lipase (class 95.7 0.027 5.9E-07 50.6 6.4 52 171-222 112-167 (229)
204 KOG2369 Lecithin:cholesterol a 95.7 0.025 5.4E-07 54.8 6.2 52 171-222 166-224 (473)
205 PF07082 DUF1350: Protein of u 95.5 0.49 1.1E-05 42.4 13.4 102 99-220 16-122 (250)
206 KOG1516 Carboxylesterase and r 95.4 0.089 1.9E-06 53.9 9.9 113 100-224 112-233 (545)
207 PF01083 Cutinase: Cutinase; 95.3 0.036 7.7E-07 47.7 5.4 55 169-223 63-122 (179)
208 PLN02454 triacylglycerol lipas 95.1 0.03 6.4E-07 54.0 4.8 38 169-206 208-248 (414)
209 PLN00413 triacylglycerol lipas 95.0 0.038 8.2E-07 54.0 5.1 36 170-205 267-303 (479)
210 TIGR03712 acc_sec_asp2 accesso 94.9 1.3 2.8E-05 43.5 15.2 101 99-225 288-392 (511)
211 PLN02162 triacylglycerol lipas 94.7 0.05 1.1E-06 53.1 5.1 35 171-205 262-297 (475)
212 KOG2521 Uncharacterized conser 94.5 1.2 2.6E-05 42.3 13.7 64 354-420 226-293 (350)
213 PLN02310 triacylglycerol lipas 94.5 0.047 1E-06 52.6 4.4 20 186-205 209-228 (405)
214 PF06259 Abhydrolase_8: Alpha/ 94.3 0.58 1.3E-05 40.0 10.2 118 98-223 17-144 (177)
215 COG2382 Fes Enterochelin ester 94.2 0.21 4.6E-06 45.8 7.7 125 79-224 80-213 (299)
216 PLN03037 lipase class 3 family 94.2 0.057 1.2E-06 53.4 4.3 39 167-205 298-337 (525)
217 PLN02934 triacylglycerol lipas 94.2 0.068 1.5E-06 52.7 4.8 35 171-205 305-340 (515)
218 PF06850 PHB_depo_C: PHB de-po 94.1 0.044 9.5E-07 46.9 3.0 66 346-417 128-202 (202)
219 PLN02571 triacylglycerol lipas 93.9 0.078 1.7E-06 51.3 4.7 36 171-206 208-246 (413)
220 PLN02408 phospholipase A1 93.8 0.092 2E-06 50.0 4.8 36 171-206 182-220 (365)
221 PLN02324 triacylglycerol lipas 93.3 0.12 2.6E-06 49.9 4.7 34 172-205 198-234 (415)
222 PF06441 EHN: Epoxide hydrolas 92.9 0.12 2.7E-06 40.5 3.6 39 72-116 70-108 (112)
223 PLN02802 triacylglycerol lipas 92.7 0.15 3.3E-06 50.3 4.6 35 172-206 313-350 (509)
224 PLN02761 lipase class 3 family 92.2 0.2 4.3E-06 49.7 4.7 34 172-205 273-313 (527)
225 PLN02753 triacylglycerol lipas 92.0 0.17 3.8E-06 50.1 4.0 20 186-205 312-331 (531)
226 PLN02719 triacylglycerol lipas 91.9 0.23 5E-06 49.1 4.7 34 172-205 278-317 (518)
227 COG4287 PqaA PhoPQ-activated p 91.7 1.5 3.3E-05 41.4 9.5 56 354-415 330-388 (507)
228 PLN02847 triacylglycerol lipas 91.6 0.29 6.2E-06 49.3 5.1 35 172-206 236-271 (633)
229 KOG4372 Predicted alpha/beta h 90.6 0.21 4.6E-06 47.7 2.9 20 186-205 150-169 (405)
230 KOG4569 Predicted lipase [Lipi 90.0 0.41 8.9E-06 45.7 4.5 35 172-206 156-191 (336)
231 PF08237 PE-PPE: PE-PPE domain 89.1 1.4 3.1E-05 39.3 7.0 32 175-206 35-68 (225)
232 COG5153 CVT17 Putative lipase 87.8 0.77 1.7E-05 41.7 4.2 46 173-222 262-308 (425)
233 KOG4540 Putative lipase essent 87.8 0.77 1.7E-05 41.7 4.2 46 173-222 262-308 (425)
234 PF05277 DUF726: Protein of un 86.8 1.1 2.5E-05 42.5 5.0 47 178-224 210-261 (345)
235 PF03283 PAE: Pectinacetyleste 85.3 2.3 5E-05 41.0 6.4 37 169-205 136-175 (361)
236 PTZ00472 serine carboxypeptida 84.5 1.8 3.9E-05 43.3 5.5 62 354-417 365-459 (462)
237 COG4822 CbiK Cobalamin biosynt 80.4 3.8 8.2E-05 35.7 5.1 42 98-144 136-178 (265)
238 PF07519 Tannase: Tannase and 79.6 6.3 0.00014 39.6 7.3 67 354-420 354-430 (474)
239 PF07519 Tannase: Tannase and 78.2 5.3 0.00012 40.1 6.3 39 186-226 115-153 (474)
240 KOG1202 Animal-type fatty acid 77.1 6.5 0.00014 43.1 6.6 97 98-222 2121-2218(2376)
241 COG4947 Uncharacterized protei 73.3 3.8 8.2E-05 34.5 3.1 47 175-223 89-136 (227)
242 KOG1283 Serine carboxypeptidas 72.6 43 0.00094 31.4 9.9 100 98-206 29-142 (414)
243 PF00450 Peptidase_S10: Serine 71.7 5.9 0.00013 38.8 4.8 60 354-415 331-414 (415)
244 COG1073 Hydrolases of the alph 68.1 0.72 1.5E-05 42.5 -2.5 38 98-141 47-84 (299)
245 KOG2385 Uncharacterized conser 64.1 10 0.00022 37.7 4.3 52 175-226 434-490 (633)
246 COG0529 CysC Adenylylsulfate k 64.1 7 0.00015 33.3 2.9 47 98-148 20-68 (197)
247 KOG2029 Uncharacterized conser 62.8 9.3 0.0002 38.7 3.9 29 175-203 512-543 (697)
248 PF10605 3HBOH: 3HB-oligomer h 61.2 9.3 0.0002 38.8 3.6 38 188-226 287-324 (690)
249 PF06309 Torsin: Torsin; Inte 60.7 6.3 0.00014 31.6 2.0 32 98-133 50-81 (127)
250 COG2830 Uncharacterized protei 57.6 25 0.00054 29.4 4.9 78 100-222 11-89 (214)
251 PLN02209 serine carboxypeptida 56.9 25 0.00054 34.9 5.9 61 353-416 351-434 (437)
252 PF09994 DUF2235: Uncharacteri 54.9 45 0.00098 30.8 7.0 35 171-205 75-111 (277)
253 KOG4388 Hormone-sensitive lipa 54.3 30 0.00064 35.2 5.7 112 99-229 395-514 (880)
254 COG3673 Uncharacterized conser 48.3 2E+02 0.0043 27.2 9.6 102 98-206 29-142 (423)
255 PF10081 Abhydrolase_9: Alpha/ 45.5 22 0.00047 32.7 3.1 38 186-223 109-147 (289)
256 COG3580 Uncharacterized protei 37.5 94 0.002 29.0 5.8 79 100-194 203-283 (351)
257 COG2240 PdxK Pyridoxal/pyridox 37.3 69 0.0015 29.6 5.0 90 106-223 11-113 (281)
258 COG1087 GalE UDP-glucose 4-epi 35.2 88 0.0019 29.3 5.3 87 125-226 16-123 (329)
259 PF01583 APS_kinase: Adenylyls 35.0 26 0.00055 29.3 1.8 38 100-141 1-38 (156)
260 PF12242 Eno-Rase_NADH_b: NAD( 34.9 78 0.0017 22.9 3.9 35 170-204 20-58 (78)
261 PF00698 Acyl_transf_1: Acyl t 34.8 56 0.0012 30.8 4.4 30 176-206 74-104 (318)
262 PRK12467 peptide synthase; Pro 34.7 1E+02 0.0022 40.2 7.6 85 100-206 3692-3777(3956)
263 KOG1209 1-Acyl dihydroxyaceton 33.3 48 0.001 29.3 3.2 38 98-142 4-41 (289)
264 cd07212 Pat_PNPLA9 Patatin-lik 33.0 62 0.0014 30.5 4.3 33 175-207 16-53 (312)
265 smart00827 PKS_AT Acyl transfe 32.8 52 0.0011 30.5 3.8 30 176-206 72-102 (298)
266 PF11364 DUF3165: Protein of u 32.6 88 0.0019 22.7 3.9 28 4-31 20-47 (81)
267 KOG4127 Renal dipeptidase [Pos 30.8 94 0.002 29.7 4.8 76 99-192 265-341 (419)
268 TIGR03131 malonate_mdcH malona 30.7 71 0.0015 29.6 4.3 26 182-207 71-97 (295)
269 TIGR00128 fabD malonyl CoA-acy 30.2 57 0.0012 30.0 3.5 30 178-207 74-104 (290)
270 KOG2170 ATPase of the AAA+ sup 30.1 39 0.00085 31.5 2.3 20 97-116 106-125 (344)
271 PF00326 Peptidase_S9: Prolyl 29.9 88 0.0019 27.1 4.6 44 99-145 143-186 (213)
272 COG0331 FabD (acyl-carrier-pro 29.6 57 0.0012 30.7 3.4 30 177-206 74-105 (310)
273 COG0218 Predicted GTPase [Gene 28.5 75 0.0016 27.7 3.6 17 354-370 136-152 (200)
274 PF11713 Peptidase_C80: Peptid 28.0 67 0.0015 26.8 3.2 36 162-198 76-116 (157)
275 PF10686 DUF2493: Protein of u 26.5 78 0.0017 22.4 2.9 38 100-145 31-71 (71)
276 COG1448 TyrB Aspartate/tyrosin 26.4 87 0.0019 30.2 3.9 132 57-222 132-264 (396)
277 PF12911 OppC_N: N-terminal TM 25.1 97 0.0021 20.4 3.0 25 6-30 9-34 (56)
278 PF14606 Lipase_GDSL_3: GDSL-l 24.3 72 0.0016 27.3 2.7 23 171-193 78-101 (178)
279 TIGR03586 PseI pseudaminic aci 24.2 2.7E+02 0.0059 26.4 6.9 81 99-206 133-214 (327)
280 PF03853 YjeF_N: YjeF-related 23.7 37 0.0008 28.7 0.9 34 99-138 24-57 (169)
281 PRK10279 hypothetical protein; 23.6 1E+02 0.0022 28.9 3.9 32 175-207 22-54 (300)
282 TIGR02816 pfaB_fam PfaB family 23.4 92 0.002 31.9 3.8 25 182-206 260-285 (538)
283 COG0400 Predicted esterase [Ge 23.2 1.4E+02 0.003 26.3 4.4 45 97-144 143-188 (207)
284 PF09419 PGP_phosphatase: Mito 22.6 3E+02 0.0065 23.3 6.1 53 129-197 36-89 (168)
285 PF02230 Abhydrolase_2: Phosph 22.4 1.1E+02 0.0023 26.8 3.7 45 100-147 155-199 (216)
286 cd07225 Pat_PNPLA6_PNPLA7 Pata 22.2 1.1E+02 0.0024 28.7 3.9 32 175-207 32-64 (306)
287 cd07198 Patatin Patatin-like p 22.1 1.3E+02 0.0028 25.2 4.0 33 175-208 15-48 (172)
288 KOG2872 Uroporphyrinogen decar 21.7 60 0.0013 29.9 1.8 30 100-142 252-281 (359)
289 PF14253 AbiH: Bacteriophage a 21.2 68 0.0015 29.3 2.2 13 186-198 235-247 (270)
290 cd00382 beta_CA Carbonic anhyd 21.0 1.3E+02 0.0028 23.8 3.4 31 171-201 43-74 (119)
291 cd07211 Pat_PNPLA8 Patatin-lik 20.1 1.3E+02 0.0028 28.2 3.8 31 175-205 25-60 (308)
No 1
>PLN02872 triacylglycerol lipase
Probab=100.00 E-value=4.4e-55 Score=420.17 Aligned_cols=357 Identities=39% Similarity=0.744 Sum_probs=313.2
Q ss_pred hcchhhhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCC
Q 035617 55 IGICASSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGF 134 (422)
Q Consensus 55 ~~~~~~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~ 134 (422)
.+.+.++++++||++|++.|+|+||+.|.+++++...... ...++|+|+|+||+..++..|..+.+..+++..|+++||
T Consensus 30 ~t~~~~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~-~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~Gy 108 (395)
T PLN02872 30 ESLCAQLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRL-GSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGF 108 (395)
T ss_pred hhhHHHHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCC-CCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCC
Confidence 3456899999999999999999999999999998643111 123478999999999999999888877899999999999
Q ss_pred eEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHh
Q 035617 135 DVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLK 214 (422)
Q Consensus 135 ~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~ 214 (422)
+||++|+||+|+|.++....+.+.+||+|++++++.+|+++++|++++..+++++++||||||.+++.++.+..+.++|+
T Consensus 109 dV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~ 188 (395)
T PLN02872 109 DVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAALTQPNVVEMVE 188 (395)
T ss_pred CcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHhhChHHHHHHH
Confidence 99999999999999988888888899999999999999999999998765589999999999999997775444456899
Q ss_pred heeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhh
Q 035617 215 SAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTV 294 (422)
Q Consensus 215 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 294 (422)
++++++|+++..+..+++...........+...+|..++.|.......+...+|... ..|.+++..+.|.+..+|.+++
T Consensus 189 ~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~-~~c~~~~~~~~g~~~~~n~~~~ 267 (395)
T PLN02872 189 AAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGH-MDCNDLLTSITGTNCCFNASRI 267 (395)
T ss_pred HHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCc-hhHHHHHHHHhCCCcccchhhh
Confidence 999999999998888888765544444555667899999999888888888899753 4699999999998878999999
Q ss_pred hhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HH
Q 035617 295 DLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QY 372 (422)
Q Consensus 295 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~ 372 (422)
+.++.+.|.++|++++.||.|.++++.|++||||. .+|...|++..||.|++++|+.++|+++++|++|.+++++ +.
T Consensus 268 ~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~-~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~ 346 (395)
T PLN02872 268 DYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGI-FKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEH 346 (395)
T ss_pred hHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCc-hhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999997 4599999999999999999975589999999999999998 88
Q ss_pred HHHHhcccCCCCCceeeEEcCCC-ccccc---cCchhHHHHHHHHHhhhcCc
Q 035617 373 LLYLCKLFSKSGESLNLICVMSK-SLSFQ---VSPQLKMIAVMALFQRQASM 420 (422)
Q Consensus 373 l~~~l~~~~~~~~~~~~~~i~~~-H~~~~---~~~~~v~~~i~~fl~~~~~~ 420 (422)
+.+.+ ++ ..+++.++++ |++++ ++++++++.|++||+++.+.
T Consensus 347 l~~~L--p~----~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 347 TLAEL--PS----KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred HHHHC--CC----ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 88998 76 3577889999 99776 88999999999999987654
No 2
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=100.00 E-value=7.4e-55 Score=411.75 Aligned_cols=351 Identities=38% Similarity=0.653 Sum_probs=315.3
Q ss_pred hcchhhhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCC
Q 035617 55 IGICASSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGF 134 (422)
Q Consensus 55 ~~~~~~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~ 134 (422)
...+.++++.+||++|++.|+|+||++|.++++|.+. .++|+|+|+||+.+++..|..+.|..++++.|+++||
T Consensus 34 ~~~~~~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~------~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGY 107 (403)
T KOG2624|consen 34 VMDTPEIIEKYGYPVEEHEVTTEDGYILTLHRIPRGK------KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGY 107 (403)
T ss_pred cccHHHHHHHcCCceEEEEEEccCCeEEEEeeecCCC------CCCCcEEEeeccccccccceecCccccHHHHHHHcCC
Confidence 3567899999999999999999999999999999984 5789999999999999999999999999999999999
Q ss_pred eEEEeCCCCCCCCCCCCCCCCC-cccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccch-hh
Q 035617 135 DVWIANTRGTRFSRRHTSLDPS-QMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQ-VD 211 (422)
Q Consensus 135 ~v~~~d~rG~G~S~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~-~~ 211 (422)
+||+.|.||..+|++|....++ +.+||+|+|+|++.+|++++||||++.++ ++++++|||+|+++.+.+++.+|. .+
T Consensus 108 DVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~ 187 (403)
T KOG2624|consen 108 DVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNK 187 (403)
T ss_pred ceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhh
Confidence 9999999999999999999996 78899999999999999999999999999 999999999999999999998753 35
Q ss_pred hHhheeeecchhhccchhhHHHHHHhhhc--HHHHHHHhcCccccCCChhHHHHHHHhccCC---ccchhhhhhhhcCCC
Q 035617 212 KLKSAALLSPIAYLSYMRTALGVIAAKSF--VGEITTLLGLAEFNPKGKPVADFLKSLCTNP---VVNCYDLLTSLTGRN 286 (422)
Q Consensus 212 ~v~~~v~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~ 286 (422)
+|+.++++||++++++..++......... ...+...+|..+|+|...+.+.+...+|... ..+|.+++..+.|++
T Consensus 188 kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~ 267 (403)
T KOG2624|consen 188 KIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWN 267 (403)
T ss_pred hhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcc
Confidence 89999999999999877777666544331 2356788899999999999999999999843 568999999999988
Q ss_pred -CCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCc
Q 035617 287 -CCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDA 365 (422)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~ 365 (422)
.+++..+...++.+.|+++|++++.||.|..+++.|++||||.. +|...|++..||.|++++|+ +||.+++|++|.
T Consensus 268 ~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~-~N~~~Y~q~~pP~Y~l~~i~--~P~~l~~g~~D~ 344 (403)
T KOG2624|consen 268 SNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSK-RNLKHYGQSTPPEYDLTNIK--VPTALYYGDNDW 344 (403)
T ss_pred hHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCcc-ccHhhcCCCCCCCCCccccc--cCEEEEecCCcc
Confidence 67888888899999999999999999999999999999999995 89999999999999999998 999999999999
Q ss_pred cCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc---cCchhHHHHHHHHHhhhc
Q 035617 366 LADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ---VSPQLKMIAVMALFQRQA 418 (422)
Q Consensus 366 ~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~---~~~~~v~~~i~~fl~~~~ 418 (422)
+++++ ..+...+ ++.. ....+.++++ |++++ +++++|++.|++.+++..
T Consensus 345 l~~~~DV~~~~~~~--~~~~--~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 345 LADPEDVLILLLVL--PNSV--IKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cCCHHHHHHHHHhc--cccc--ccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 99999 6577777 6621 1233348999 99999 889999999999998654
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=2.9e-28 Score=234.41 Aligned_cols=280 Identities=15% Similarity=0.183 Sum_probs=172.6
Q ss_pred CceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCC
Q 035617 66 GYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTR 145 (422)
Q Consensus 66 ~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G 145 (422)
|+..++..+.+.||..+.+..+.+.. ..++++|||+||++++...| ...++..|+++||+|+++|+||||
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~-----~~~~~~iv~lHG~~~~~~~~-----~~~~~~~l~~~g~~v~~~D~~G~G 127 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPEN-----SRPKAAVCFCHGYGDTCTFF-----FEGIARKIASSGYGVFAMDYPGFG 127 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCC-----CCCCeEEEEECCCCCccchH-----HHHHHHHHHhCCCEEEEecCCCCC
Confidence 45567777888999999988776542 13578999999998877653 156777898889999999999999
Q ss_pred CCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHh--C-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 146 FSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQT--G-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 146 ~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~--~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
.|++.... ..++++++ +|+.++++.+.... . .+++|+||||||++++.++.++| ++|+++|+++|+
T Consensus 128 ~S~~~~~~--------~~~~~~~~-~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p--~~v~glVLi~p~ 196 (349)
T PLN02385 128 LSEGLHGY--------IPSFDDLV-DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP--NAWDGAILVAPM 196 (349)
T ss_pred CCCCCCCC--------cCCHHHHH-HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCc--chhhheeEeccc
Confidence 99763210 23677766 78888888875432 2 58999999999999999988776 789999999997
Q ss_pred hhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhc-C
Q 035617 223 AYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRN-E 301 (422)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~ 301 (422)
........+.... . .....+...+....+.+....... .... ........+... .
T Consensus 197 ~~~~~~~~~~~~~-~-~~~~~~~~~~p~~~~~~~~~~~~~----~~~~------------------~~~~~~~~~~~~~~ 252 (349)
T PLN02385 197 CKIADDVVPPPLV-L-QILILLANLLPKAKLVPQKDLAEL----AFRD------------------LKKRKMAEYNVIAY 252 (349)
T ss_pred ccccccccCchHH-H-HHHHHHHHHCCCceecCCCccccc----cccC------------------HHHHHHhhcCccee
Confidence 5432111010000 0 000001111100001111000000 0000 000000000000 0
Q ss_pred CCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcc
Q 035617 302 PQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKL 379 (422)
Q Consensus 302 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~ 379 (422)
......+.......... + ....+.+|+ +|+|+++|++|.++|++ +.+++.+
T Consensus 253 ~~~~~~~~~~~~l~~~~-------~----------------~~~~l~~i~--~P~Lii~G~~D~vv~~~~~~~l~~~~-- 305 (349)
T PLN02385 253 KDKPRLRTAVELLRTTQ-------E----------------IEMQLEEVS--LPLLILHGEADKVTDPSVSKFLYEKA-- 305 (349)
T ss_pred CCCcchHHHHHHHHHHH-------H----------------HHHhcccCC--CCEEEEEeCCCCccChHHHHHHHHHc--
Confidence 00001111111111000 0 001456676 99999999999999998 8888887
Q ss_pred cCCCCCceeeEEcCCC-ccccccCchh----HHHHHHHHHhhhcCc
Q 035617 380 FSKSGESLNLICVMSK-SLSFQVSPQL----KMIAVMALFQRQASM 420 (422)
Q Consensus 380 ~~~~~~~~~~~~i~~~-H~~~~~~~~~----v~~~i~~fl~~~~~~ 420 (422)
++ ..++++++|++ |..+.+.|++ |++.|++||+++.+.
T Consensus 306 ~~---~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~~ 348 (349)
T PLN02385 306 SS---SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHSTQ 348 (349)
T ss_pred CC---CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhccC
Confidence 54 23789999999 9999888876 889999999998764
No 4
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=7.2e-28 Score=213.91 Aligned_cols=275 Identities=19% Similarity=0.199 Sum_probs=188.3
Q ss_pred hcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCC
Q 035617 64 IHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRG 143 (422)
Q Consensus 64 ~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG 143 (422)
+.+.....-.+++.+|..|....|.+.. ...++..|+++||+++.+... +.+++..|+..||.|+++|++|
T Consensus 22 ~~~~~~~~~~~~n~rG~~lft~~W~p~~----~~~pr~lv~~~HG~g~~~s~~-----~~~~a~~l~~~g~~v~a~D~~G 92 (313)
T KOG1455|consen 22 DGGVTYSESFFTNPRGAKLFTQSWLPLS----GTEPRGLVFLCHGYGEHSSWR-----YQSTAKRLAKSGFAVYAIDYEG 92 (313)
T ss_pred CCccceeeeeEEcCCCCEeEEEecccCC----CCCCceEEEEEcCCcccchhh-----HHHHHHHHHhCCCeEEEeeccC
Confidence 3444556678899999999988887753 225788999999999987543 4789999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeec
Q 035617 144 TRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLS 220 (422)
Q Consensus 144 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~ 220 (422)
||.|++-....+ +++..+ +|+...++.+..+.. .+.+++||||||++++.++.++| +..+++|+++
T Consensus 93 hG~SdGl~~yi~--------~~d~~v-~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p--~~w~G~ilva 161 (313)
T KOG1455|consen 93 HGRSDGLHAYVP--------SFDLVV-DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDP--NFWDGAILVA 161 (313)
T ss_pred CCcCCCCcccCC--------cHHHHH-HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCC--cccccceeee
Confidence 999998554433 344444 888888888766654 78999999999999999998766 7899999999
Q ss_pred chhhccchh--hHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhh
Q 035617 221 PIAYLSYMR--TALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFL 298 (422)
Q Consensus 221 p~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (422)
|..-..... .+....+... +...+-.....|..... ... ..+.......
T Consensus 162 Pmc~i~~~~kp~p~v~~~l~~----l~~liP~wk~vp~~d~~----~~~---------------------~kdp~~r~~~ 212 (313)
T KOG1455|consen 162 PMCKISEDTKPHPPVISILTL----LSKLIPTWKIVPTKDII----DVA---------------------FKDPEKRKIL 212 (313)
T ss_pred cccccCCccCCCcHHHHHHHH----HHHhCCceeecCCcccc----ccc---------------------cCCHHHHHHh
Confidence 986544332 2222211111 11111111122221100 000 1111112222
Q ss_pred hcCC----CcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HH
Q 035617 299 RNEP----QSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QY 372 (422)
Q Consensus 299 ~~~~----~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~ 372 (422)
...| .+.++++..++++.... . . -++.+++ +|++++||+.|.+++++ +.
T Consensus 213 ~~npl~y~g~pRl~T~~ElLr~~~~-------l---e-------------~~l~~vt--vPflilHG~dD~VTDp~~Sk~ 267 (313)
T KOG1455|consen 213 RSDPLCYTGKPRLKTAYELLRVTAD-------L---E-------------KNLNEVT--VPFLILHGTDDKVTDPKVSKE 267 (313)
T ss_pred hcCCceecCCccHHHHHHHHHHHHH-------H---H-------------Hhccccc--ccEEEEecCCCcccCcHHHHH
Confidence 2222 23445555555544331 0 0 0466777 99999999999999999 99
Q ss_pred HHHHhcccCCCCCceeeEEcCCC-ccccc----cCchhHHHHHHHHHhhh
Q 035617 373 LLYLCKLFSKSGESLNLICVMSK-SLSFQ----VSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 373 l~~~l~~~~~~~~~~~~~~i~~~-H~~~~----~~~~~v~~~i~~fl~~~ 417 (422)
+++.. +. ..+++.++|+. |..+. +..+.|...|++||+++
T Consensus 268 Lye~A--~S---~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 268 LYEKA--SS---SDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHhc--cC---CCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99998 55 45899999999 99985 66778889999999875
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=9.5e-27 Score=222.39 Aligned_cols=280 Identities=16% Similarity=0.198 Sum_probs=171.2
Q ss_pred hhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCC
Q 035617 63 IIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTR 142 (422)
Q Consensus 63 ~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~r 142 (422)
+-.+.+.+...+.+.||..+.++.+.+.. ....+++|||+||++.+. .|. ...++..|+++||+|+++|+|
T Consensus 26 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~----~~~~~~~VvllHG~~~~~-~~~----~~~~~~~L~~~Gy~V~~~D~r 96 (330)
T PLN02298 26 ALKGIKGSKSFFTSPRGLSLFTRSWLPSS----SSPPRALIFMVHGYGNDI-SWT----FQSTAIFLAQMGFACFALDLE 96 (330)
T ss_pred hccCCccccceEEcCCCCEEEEEEEecCC----CCCCceEEEEEcCCCCCc-cee----hhHHHHHHHhCCCEEEEecCC
Confidence 34466667778999999999997765442 113567899999998664 332 256778899999999999999
Q ss_pred CCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHh--C-CeEEEEEeChhHHHHHHHHhccchhhhHhheeee
Q 035617 143 GTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQT--G-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALL 219 (422)
Q Consensus 143 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~--~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~ 219 (422)
|||.|.+.... ..++++++ +|+.++++++.+.. . .+++|+||||||.+++.++.++| ++|+++|++
T Consensus 97 GhG~S~~~~~~--------~~~~~~~~-~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p--~~v~~lvl~ 165 (330)
T PLN02298 97 GHGRSEGLRAY--------VPNVDLVV-EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANP--EGFDGAVLV 165 (330)
T ss_pred CCCCCCCcccc--------CCCHHHHH-HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCc--ccceeEEEe
Confidence 99999753211 23566666 89999999997653 2 67999999999999999888766 789999999
Q ss_pred cchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhh
Q 035617 220 SPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLR 299 (422)
Q Consensus 220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 299 (422)
+|.........+.... . .....+...+......+...... . .........+..
T Consensus 166 ~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~--------------~-----------~~~~~~~~~~~~ 218 (330)
T PLN02298 166 APMCKISDKIRPPWPI-P-QILTFVARFLPTLAIVPTADLLE--------------K-----------SVKVPAKKIIAK 218 (330)
T ss_pred cccccCCcccCCchHH-H-HHHHHHHHHCCCCccccCCCccc--------------c-----------cccCHHHHHHHH
Confidence 9975432211000000 0 00000000000000000000000 0 000000000000
Q ss_pred cCCC----cchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHH
Q 035617 300 NEPQ----STSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYL 373 (422)
Q Consensus 300 ~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l 373 (422)
..+. ......+......... . .-.+.+++ +|+|+++|++|.++|++ +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-------~----------------~~~l~~i~--~PvLii~G~~D~ivp~~~~~~l 273 (330)
T PLN02298 219 RNPMRYNGKPRLGTVVELLRVTDY-------L----------------GKKLKDVS--IPFIVLHGSADVVTDPDVSRAL 273 (330)
T ss_pred hCccccCCCccHHHHHHHHHHHHH-------H----------------HHhhhhcC--CCEEEEecCCCCCCCHHHHHHH
Confidence 0000 0001111111111000 0 00355666 99999999999999999 888
Q ss_pred HHHhcccCCCCCceeeEEcCCC-ccccccCch----hHHHHHHHHHhhhcC
Q 035617 374 LYLCKLFSKSGESLNLICVMSK-SLSFQVSPQ----LKMIAVMALFQRQAS 419 (422)
Q Consensus 374 ~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~----~v~~~i~~fl~~~~~ 419 (422)
++.+ +. ..+++++++++ |..+.+.|+ .+.+.|.+||+++..
T Consensus 274 ~~~i--~~---~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 274 YEEA--KS---EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHh--cc---CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 8888 53 23789999999 999987775 577889999998754
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=1e-26 Score=216.50 Aligned_cols=260 Identities=12% Similarity=0.117 Sum_probs=163.4
Q ss_pred EECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCC
Q 035617 74 VTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSL 153 (422)
Q Consensus 74 v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~ 153 (422)
+...||..|.+..+.+.. .+++.|+++||+++++..| ..++..|+++||+|+++|+||||.|++...
T Consensus 5 ~~~~~g~~l~~~~~~~~~------~~~~~v~llHG~~~~~~~~------~~~~~~l~~~g~~via~D~~G~G~S~~~~~- 71 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT------YPKALVFISHGAGEHSGRY------EELAENISSLGILVFSHDHIGHGRSNGEKM- 71 (276)
T ss_pred eecCCCCEEEEEeccCCC------CCCEEEEEeCCCccccchH------HHHHHHHHhCCCEEEEccCCCCCCCCCccC-
Confidence 456799999998776642 3467788889999999988 668888999999999999999999975321
Q ss_pred CCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHH
Q 035617 154 DPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTAL 232 (422)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~ 232 (422)
. ..++.+.. +|+...++++.+..+ .+++++||||||.+++.++..+| ++|+++|+++|....... +.
T Consensus 72 ~-------~~~~~~~~-~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p--~~i~~lil~~p~~~~~~~--~~ 139 (276)
T PHA02857 72 M-------IDDFGVYV-RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNP--NLFTAMILMSPLVNAEAV--PR 139 (276)
T ss_pred C-------cCCHHHHH-HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCc--cccceEEEeccccccccc--cH
Confidence 0 12555655 788888888866666 78999999999999999998766 789999999997542211 11
Q ss_pred HHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCC---CcchHHH
Q 035617 233 GVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEP---QSTSTKN 309 (422)
Q Consensus 233 ~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~s~~~ 309 (422)
...... .....+......... .. ..+.. +......+..... .......
T Consensus 140 ~~~~~~----~~~~~~~~~~~~~~~--~~---~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~ 190 (276)
T PHA02857 140 LNLLAA----KLMGIFYPNKIVGKL--CP---ESVSR--------------------DMDEVYKYQYDPLVNHEKIKAGF 190 (276)
T ss_pred HHHHHH----HHHHHhCCCCccCCC--CH---hhccC--------------------CHHHHHHHhcCCCccCCCccHHH
Confidence 110000 001111011000000 00 00000 0000000000000 0000000
Q ss_pred HHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCce
Q 035617 310 MVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESL 387 (422)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~ 387 (422)
.......... ....+.+++ +|||+++|++|.++|++ +++.+.+ +. .+
T Consensus 191 ~~~~~~~~~~-----------------------~~~~l~~i~--~Pvliv~G~~D~i~~~~~~~~l~~~~--~~----~~ 239 (276)
T PHA02857 191 ASQVLKATNK-----------------------VRKIIPKIK--TPILILQGTNNEISDVSGAYYFMQHA--NC----NR 239 (276)
T ss_pred HHHHHHHHHH-----------------------HHHhcccCC--CCEEEEecCCCCcCChHHHHHHHHHc--cC----Cc
Confidence 0000000000 001456676 99999999999999999 7888877 43 37
Q ss_pred eeEEcCCC-ccccccC---chhHHHHHHHHHhhhc
Q 035617 388 NLICVMSK-SLSFQVS---PQLKMIAVMALFQRQA 418 (422)
Q Consensus 388 ~~~~i~~~-H~~~~~~---~~~v~~~i~~fl~~~~ 418 (422)
++.+++++ |..+.|. .+++++.|++||+++.
T Consensus 240 ~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 240 EIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred eEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 89999999 9999854 4689999999999873
No 7
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=6.9e-27 Score=217.78 Aligned_cols=276 Identities=20% Similarity=0.241 Sum_probs=179.5
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCC-
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSR- 148 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~- 148 (422)
.+..+.+.||..+.++.+.... .++.+||++||++++...| ..+++.|..+||.|+++|+||||.|.
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~------~~~g~Vvl~HG~~Eh~~ry------~~la~~l~~~G~~V~~~D~RGhG~S~r 77 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPE------PPKGVVVLVHGLGEHSGRY------EELADDLAARGFDVYALDLRGHGRSPR 77 (298)
T ss_pred ccceeecCCCceEEEEeecCCC------CCCcEEEEecCchHHHHHH------HHHHHHHHhCCCEEEEecCCCCCCCCC
Confidence 4557788899999999998774 2348999999999999996 67999999999999999999999997
Q ss_pred CCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccc
Q 035617 149 RHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSY 227 (422)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~ 227 (422)
+...... ++.++. .|+.++++.+.+... .+++++||||||.+++.++.+++ .+|+++|+.||+.....
T Consensus 78 ~~rg~~~--------~f~~~~-~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~--~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 78 GQRGHVD--------SFADYV-DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP--PRIDGLVLSSPALGLGG 146 (298)
T ss_pred CCcCCch--------hHHHHH-HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC--ccccEEEEECccccCCh
Confidence 3322111 356656 899999999977655 99999999999999999999776 79999999999876653
Q ss_pred --hhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcc
Q 035617 228 --MRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQST 305 (422)
Q Consensus 228 --~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 305 (422)
...+....... +...+.|...+.......+ ......-++.....+..+.....
T Consensus 147 ~~~~~~~~~~~~~----------~~~~~~p~~~~~~~~~~~~---------------~~~~~sr~~~~~~~~~~dP~~~~ 201 (298)
T COG2267 147 AILRLILARLALK----------LLGRIRPKLPVDSNLLEGV---------------LTDDLSRDPAEVAAYEADPLIGV 201 (298)
T ss_pred hHHHHHHHHHhcc----------cccccccccccCcccccCc---------------CcchhhcCHHHHHHHhcCCcccc
Confidence 11111111110 1111212111000000000 00000112223333332221111
Q ss_pred hHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCC-hh--HHHHHHhcccCC
Q 035617 306 STKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALAD-LT--QYLLYLCKLFSK 382 (422)
Q Consensus 306 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~-~~--~~l~~~l~~~~~ 382 (422)
......++........ .+-.....+++ +|||+++|++|.+++ .+ .++++.++.++
T Consensus 202 ~~~~~~w~~~~~~a~~-------------------~~~~~~~~~~~--~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~- 259 (298)
T COG2267 202 GGPVSRWVDLALLAGR-------------------VPALRDAPAIA--LPVLLLQGGDDRVVDNVEGLARFFERAGSPD- 259 (298)
T ss_pred CCccHHHHHHHHHhhc-------------------ccchhcccccc--CCEEEEecCCCccccCcHHHHHHHHhcCCCC-
Confidence 1112222222222111 00001234555 999999999999999 56 77777874333
Q ss_pred CCCceeeEEcCCC-ccccc-cCc--hhHHHHHHHHHhhhcC
Q 035617 383 SGESLNLICVMSK-SLSFQ-VSP--QLKMIAVMALFQRQAS 419 (422)
Q Consensus 383 ~~~~~~~~~i~~~-H~~~~-~~~--~~v~~~i~~fl~~~~~ 419 (422)
+++++++++ |..+. ... +++++.+.+|++++..
T Consensus 260 ----~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 260 ----KELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ----ceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 889999999 99998 334 8999999999998764
No 8
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=1.8e-26 Score=220.04 Aligned_cols=136 Identities=21% Similarity=0.218 Sum_probs=107.9
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR 149 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~ 149 (422)
|+..+...||..+.+..+++.. ++++||++||++++...| ..++..|+++||+|+++|+||||.|.+
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~-------~~~~vll~HG~~~~~~~y------~~~~~~l~~~g~~v~~~D~~G~G~S~~ 97 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPH-------HDRVVVICPGRIESYVKY------AELAYDLFHLGYDVLIIDHRGQGRSGR 97 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCC-------CCcEEEEECCccchHHHH------HHHHHHHHHCCCeEEEEcCCCCCCCCC
Confidence 5566777899988888876542 467999999999888776 668888889999999999999999975
Q ss_pred CCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 150 HTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
...... . ....++++++ +|+.++++.+.+..+ .+++++||||||.+++.++..++ ++|+++|+++|...
T Consensus 98 ~~~~~~--~-~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p--~~v~~lvl~~p~~~ 167 (330)
T PRK10749 98 LLDDPH--R-GHVERFNDYV-DDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHP--GVFDAIALCAPMFG 167 (330)
T ss_pred CCCCCC--c-CccccHHHHH-HHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCC--CCcceEEEECchhc
Confidence 321110 0 1134778877 799999988766656 89999999999999999988766 78999999999754
No 9
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.95 E-value=5.1e-27 Score=211.95 Aligned_cols=290 Identities=18% Similarity=0.234 Sum_probs=176.9
Q ss_pred EEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCC
Q 035617 71 EIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRH 150 (422)
Q Consensus 71 ~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~ 150 (422)
++...+-+| +.+++...+. ..+|.|+++||+..+..+|+.+.+. |+.+||+|+++|+||+|.|+.+
T Consensus 23 ~hk~~~~~g--I~~h~~e~g~------~~gP~illlHGfPe~wyswr~q~~~------la~~~~rviA~DlrGyG~Sd~P 88 (322)
T KOG4178|consen 23 SHKFVTYKG--IRLHYVEGGP------GDGPIVLLLHGFPESWYSWRHQIPG------LASRGYRVIAPDLRGYGFSDAP 88 (322)
T ss_pred ceeeEEEcc--EEEEEEeecC------CCCCEEEEEccCCccchhhhhhhhh------hhhcceEEEecCCCCCCCCCCC
Confidence 345555577 5555554443 3589999999999999999777665 9999999999999999999986
Q ss_pred CCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchh
Q 035617 151 TSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMR 229 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~ 229 (422)
.... .|++..++ .|+.++++.+ + ++++++||+||+++|+.+|..+| ++|+++|.++.... ....
T Consensus 89 ~~~~-------~Yt~~~l~-~di~~lld~L----g~~k~~lvgHDwGaivaw~la~~~P--erv~~lv~~nv~~~-~p~~ 153 (322)
T KOG4178|consen 89 PHIS-------EYTIDELV-GDIVALLDHL----GLKKAFLVGHDWGAIVAWRLALFYP--ERVDGLVTLNVPFP-NPKL 153 (322)
T ss_pred CCcc-------eeeHHHHH-HHHHHHHHHh----ccceeEEEeccchhHHHHHHHHhCh--hhcceEEEecCCCC-Cccc
Confidence 5433 88999988 8888888877 8 99999999999999999999777 89999999986544 1111
Q ss_pred hHHHHHHhhhcHHHHHHHhcCcccc---CCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcch
Q 035617 230 TALGVIAAKSFVGEITTLLGLAEFN---PKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTS 306 (422)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~g~~~~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s 306 (422)
.+.... ...++..... ........ .+.. ..++.+...+..... .....++......+....
T Consensus 154 ~~~~~~---------~~~f~~~~y~~~fQ~~~~~E~----~~s~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~w~t 217 (322)
T KOG4178|consen 154 KPLDSS---------KAIFGKSYYICLFQEPGKPET----ELSK--DDTEMLVKTFRTRKT-PGPLIVPKQPNENPLWLT 217 (322)
T ss_pred chhhhh---------ccccCccceeEeccccCcchh----hhcc--chhHHhHHhhhcccc-CCccccCCCCCCccchhh
Confidence 111111 1111111100 00000000 0000 001111100100000 000000000000011122
Q ss_pred HHHHHHHHHHHhcCCeee-ecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh---HHHHHHhcccCC
Q 035617 307 TKNMVHLAQTVRDGVIAK-FNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT---QYLLYLCKLFSK 382 (422)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~---~~l~~~l~~~~~ 382 (422)
.+.+.-+...+..+.|.. +++. +|+...... ....+.+|+ +||++++|++|.+.+.. ..+.+.+ ++
T Consensus 218 ~edi~~~~~~f~~~g~~gplNyy---rn~~r~w~a--~~~~~~~i~--iPv~fi~G~~D~v~~~p~~~~~~rk~v--p~- 287 (322)
T KOG4178|consen 218 EEDIAFYVSKFQIDGFTGPLNYY---RNFRRNWEA--APWALAKIT--IPVLFIWGDLDPVLPYPIFGELYRKDV--PR- 287 (322)
T ss_pred HHHHHHHHhccccccccccchhh---HHHhhCchh--ccccccccc--cceEEEEecCcccccchhHHHHHHHhh--cc-
Confidence 334444444444333442 2221 234333321 122567787 99999999999998777 4445555 65
Q ss_pred CCCceeeEEcCCC-ccccccCchhHHHHHHHHHhhhc
Q 035617 383 SGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQA 418 (422)
Q Consensus 383 ~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~~ 418 (422)
..+.++++++ |+.+.|.|++|++.|++|+++..
T Consensus 288 ---l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 288 ---LTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ---ccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 2367889999 99999999999999999998753
No 10
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=1.8e-25 Score=216.29 Aligned_cols=272 Identities=15% Similarity=0.086 Sum_probs=169.8
Q ss_pred eeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCC
Q 035617 69 CQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSR 148 (422)
Q Consensus 69 ~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~ 148 (422)
.+...+...+|..+.+..+.+.. ...+++||++||++++...| ..++..|+++||+|+++|+||||.|+
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~-----~~~~~~Vl~lHG~~~~~~~~------~~~a~~L~~~Gy~V~~~D~rGhG~S~ 178 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA-----GEMRGILIIIHGLNEHSGRY------LHFAKQLTSCGFGVYAMDWIGHGGSD 178 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC-----CCCceEEEEECCchHHHHHH------HHHHHHHHHCCCEEEEeCCCCCCCCC
Confidence 45556777888888877775542 13578999999999988776 67888899999999999999999997
Q ss_pred CCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccc
Q 035617 149 RHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSY 227 (422)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~ 227 (422)
+.... ..+++.+. +|+.++++++....+ .+++++||||||.+++.++...+.+++|+++|+.+|......
T Consensus 179 ~~~~~--------~~~~~~~~-~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~ 249 (395)
T PLN02652 179 GLHGY--------VPSLDYVV-EDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKP 249 (395)
T ss_pred CCCCC--------CcCHHHHH-HHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECccccccc
Confidence 63211 23555555 899999999987766 789999999999999987653322358999999999864432
Q ss_pred hhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCC--C-c
Q 035617 228 MRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEP--Q-S 304 (422)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~-~ 304 (422)
. .+....... .....+....+...... +.....+............ . .
T Consensus 250 ~-~~~~~~~~~----l~~~~~p~~~~~~~~~~------------------------~~~~s~~~~~~~~~~~dp~~~~g~ 300 (395)
T PLN02652 250 A-HPIVGAVAP----IFSLVAPRFQFKGANKR------------------------GIPVSRDPAALLAKYSDPLVYTGP 300 (395)
T ss_pred c-hHHHHHHHH----HHHHhCCCCcccCcccc------------------------cCCcCCCHHHHHHHhcCCCcccCC
Confidence 1 111111100 00000000000000000 0000000000000000000 0 0
Q ss_pred chHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCC
Q 035617 305 TSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSK 382 (422)
Q Consensus 305 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~ 382 (422)
............... . ...+.+|+ +|+|+++|++|.++|++ +++++.+ ++
T Consensus 301 i~~~~~~~~~~~~~~-------l----------------~~~L~~I~--vPvLIi~G~~D~vvp~~~a~~l~~~~--~~- 352 (395)
T PLN02652 301 IRVRTGHEILRISSY-------L----------------TRNFKSVT--VPFMVLHGTADRVTDPLASQDLYNEA--AS- 352 (395)
T ss_pred chHHHHHHHHHHHHH-------H----------------HhhcccCC--CCEEEEEeCCCCCCCHHHHHHHHHhc--CC-
Confidence 001111000000000 0 00456676 99999999999999998 8888887 54
Q ss_pred CCCceeeEEcCCC-cccccc-CchhHHHHHHHHHhhhcC
Q 035617 383 SGESLNLICVMSK-SLSFQV-SPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 383 ~~~~~~~~~i~~~-H~~~~~-~~~~v~~~i~~fl~~~~~ 419 (422)
..++++.+|++ |..+.+ .++++++.|.+||+++..
T Consensus 353 --~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 353 --RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred --CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 24788899999 999885 799999999999998754
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=1.2e-26 Score=218.90 Aligned_cols=277 Identities=16% Similarity=0.157 Sum_probs=160.2
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR 149 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~ 149 (422)
..+.+...||....+++...+. ..+|+|||+||+++++..| ..++..|+++||+|+++|+||||.|+.
T Consensus 22 ~~~~~~~~~~~~~~i~y~~~G~------~~~~~lvliHG~~~~~~~w------~~~~~~L~~~gy~vi~~Dl~G~G~S~~ 89 (302)
T PRK00870 22 HYVDVDDGDGGPLRMHYVDEGP------ADGPPVLLLHGEPSWSYLY------RKMIPILAAAGHRVIAPDLIGFGRSDK 89 (302)
T ss_pred eeEeecCCCCceEEEEEEecCC------CCCCEEEEECCCCCchhhH------HHHHHHHHhCCCEEEEECCCCCCCCCC
Confidence 4445554456666666665543 2368999999999999998 567778988899999999999999975
Q ss_pred CCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccch
Q 035617 150 HTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYM 228 (422)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~ 228 (422)
..... +|++++++ +|+.++++.+ + ++++++||||||.++..++..+| ++|+++++++|.......
T Consensus 90 ~~~~~-------~~~~~~~a-~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~ 155 (302)
T PRK00870 90 PTRRE-------DYTYARHV-EWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHP--DRFARLVVANTGLPTGDG 155 (302)
T ss_pred CCCcc-------cCCHHHHH-HHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhCh--hheeEEEEeCCCCCCccc
Confidence 32111 56788877 6776666554 7 89999999999999999999766 899999999975321110
Q ss_pred hhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHH
Q 035617 229 RTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTK 308 (422)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~ 308 (422)
..+. .. .. +.. + ....+.. ........... .....+....+...... ....
T Consensus 156 ~~~~-~~-~~-----~~~-~--~~~~~~~-~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~-~~~~ 206 (302)
T PRK00870 156 PMPD-AF-WA-----WRA-F--SQYSPVL-PVGRLVNGGTV-----------------RDLSDAVRAAYDAPFPD-ESYK 206 (302)
T ss_pred cchH-HH-hh-----hhc-c--cccCchh-hHHHHhhcccc-----------------ccCCHHHHHHhhcccCC-hhhh
Confidence 0000 00 00 000 0 0000000 00000000000 00111111111100000 0000
Q ss_pred HHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh-HHHHHHhcccCCCCCce
Q 035617 309 NMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT-QYLLYLCKLFSKSGESL 387 (422)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~-~~l~~~l~~~~~~~~~~ 387 (422)
.......... .......... ....-...+.+++ +|+++|+|++|.++++. +++.+.+ ++. ..+
T Consensus 207 ~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~--~~~--~~~ 270 (302)
T PRK00870 207 AGARAFPLLV-------PTSPDDPAVA---ANRAAWAVLERWD--KPFLTAFSDSDPITGGGDAILQKRI--PGA--AGQ 270 (302)
T ss_pred cchhhhhhcC-------CCCCCCcchH---HHHHHHHhhhcCC--CceEEEecCCCCcccCchHHHHhhc--ccc--ccc
Confidence 0000000000 0000000000 0000001356776 99999999999999988 8888888 761 012
Q ss_pred eeEEcCCC-ccccccCchhHHHHHHHHHhhh
Q 035617 388 NLICVMSK-SLSFQVSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 388 ~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~ 417 (422)
.++.++++ |+.+++.|+++++.|.+|++++
T Consensus 271 ~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 271 PHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred ceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 37889999 9999999999999999999875
No 12
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.95 E-value=2.6e-26 Score=213.79 Aligned_cols=256 Identities=13% Similarity=0.101 Sum_probs=157.9
Q ss_pred CCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 035617 77 KDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPS 156 (422)
Q Consensus 77 ~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~ 156 (422)
-||..++++....++ .+++|||+||+++++..| ..++..|.+ +|+|+++|+||||.|+....
T Consensus 9 ~~~~~~~~~~~~~~~-------~~~plvllHG~~~~~~~w------~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~---- 70 (276)
T TIGR02240 9 LDGQSIRTAVRPGKE-------GLTPLLIFNGIGANLELV------FPFIEALDP-DLEVIAFDVPGVGGSSTPRH---- 70 (276)
T ss_pred cCCcEEEEEEecCCC-------CCCcEEEEeCCCcchHHH------HHHHHHhcc-CceEEEECCCCCCCCCCCCC----
Confidence 377788887754332 357999999999999998 456666865 79999999999999975321
Q ss_pred cccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchh-hHHHH
Q 035617 157 QMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMR-TALGV 234 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~-~~~~~ 234 (422)
++++++++ +|+.++++.+ + ++++|+||||||.+++.+|.++| ++|+++|+++|........ .+...
T Consensus 71 -----~~~~~~~~-~~~~~~i~~l----~~~~~~LvG~S~GG~va~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~ 138 (276)
T TIGR02240 71 -----PYRFPGLA-KLAARMLDYL----DYGQVNAIGVSWGGALAQQFAHDYP--ERCKKLILAATAAGAVMVPGKPKVL 138 (276)
T ss_pred -----cCcHHHHH-HHHHHHHHHh----CcCceEEEEECHHHHHHHHHHHHCH--HHhhheEEeccCCccccCCCchhHH
Confidence 56788877 7888877776 7 89999999999999999999776 8999999999876421111 01000
Q ss_pred HHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHH
Q 035617 235 IAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLA 314 (422)
Q Consensus 235 ~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 314 (422)
...... ...... .. . . ...... .+.....+......+..............
T Consensus 139 ~~~~~~----~~~~~~-~~-~----~-~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 189 (276)
T TIGR02240 139 MMMASP----RRYIQP-SH-G----I-HIAPDI---------------YGGAFRRDPELAMAHASKVRSGGKLGYYW--- 189 (276)
T ss_pred HHhcCc----hhhhcc-cc-c----c-chhhhh---------------ccceeeccchhhhhhhhhcccCCCchHHH---
Confidence 000000 000000 00 0 0 000000 00000001111111111000000000000
Q ss_pred HHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEc
Q 035617 315 QTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICV 392 (422)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i 392 (422)
+.... .++. ....+.+|+ +|+|+++|++|.++|++ +++.+.+ ++ .+++.+
T Consensus 190 ~~~~~-----~~~~--------------~~~~l~~i~--~P~lii~G~~D~~v~~~~~~~l~~~~--~~-----~~~~~i 241 (276)
T TIGR02240 190 QLFAG-----LGWT--------------SIHWLHKIQ--QPTLVLAGDDDPIIPLINMRLLAWRI--PN-----AELHII 241 (276)
T ss_pred HHHHH-----cCCc--------------hhhHhhcCC--CCEEEEEeCCCCcCCHHHHHHHHHhC--CC-----CEEEEE
Confidence 00000 0000 001356777 99999999999999998 7888888 87 777888
Q ss_pred CCCccccccCchhHHHHHHHHHhhhcC
Q 035617 393 MSKSLSFQVSPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 393 ~~~H~~~~~~~~~v~~~i~~fl~~~~~ 419 (422)
+++|+.+.+.|+++++.|.+|+++..+
T Consensus 242 ~~gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 242 DDGHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred cCCCchhhccHHHHHHHHHHHHHHhhh
Confidence 644999999999999999999988643
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=2.2e-26 Score=216.26 Aligned_cols=273 Identities=15% Similarity=0.221 Sum_probs=158.7
Q ss_pred CCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCc
Q 035617 78 DGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQ 157 (422)
Q Consensus 78 dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~ 157 (422)
+|..+++..... ++|+|||+||+++++..| ..++..|+++ |+|+++|+||||.|+.........
T Consensus 16 ~~~~i~y~~~G~---------~~~~vlllHG~~~~~~~w------~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~ 79 (294)
T PLN02824 16 KGYNIRYQRAGT---------SGPALVLVHGFGGNADHW------RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPP 79 (294)
T ss_pred cCeEEEEEEcCC---------CCCeEEEECCCCCChhHH------HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccc
Confidence 676666544321 247999999999999998 4566778875 799999999999997632110000
Q ss_pred ccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchh-h-HHHH
Q 035617 158 MEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMR-T-ALGV 234 (422)
Q Consensus 158 ~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~-~-~~~~ 234 (422)
. ..|++++++ +|+.++++.+ + ++++++||||||.+++.+|.++| ++|+++|+++|........ . ....
T Consensus 80 ~--~~~~~~~~a-~~l~~~l~~l----~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lili~~~~~~~~~~~~~~~~~ 150 (294)
T PLN02824 80 N--SFYTFETWG-EQLNDFCSDV----VGDPAFVICNSVGGVVGLQAAVDAP--ELVRGVMLINISLRGLHIKKQPWLGR 150 (294)
T ss_pred c--ccCCHHHHH-HHHHHHHHHh----cCCCeEEEEeCHHHHHHHHHHHhCh--hheeEEEEECCCcccccccccchhhh
Confidence 0 157888888 7777777665 6 89999999999999999999776 8999999999864221100 0 0000
Q ss_pred HHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHH
Q 035617 235 IAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLA 314 (422)
Q Consensus 235 ~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 314 (422)
.. ...+...+.... ..+.+....... .....++....+.+...++.....+............ +.
T Consensus 151 ~~----~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 215 (294)
T PLN02824 151 PF----IKAFQNLLRETA------VGKAFFKSVATP--ETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDV---FL 215 (294)
T ss_pred HH----HHHHHHHHhchh------HHHHHHHhhcCH--HHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHH---HH
Confidence 00 000011000000 000000000000 0001111111111111222222222221111111111 11
Q ss_pred HHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEc
Q 035617 315 QTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICV 392 (422)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i 392 (422)
.... +... ......+++|+ +|+|+|+|++|.+++.+ +++.+.+ ++ .+++++
T Consensus 216 ~~~~------~~~~------------~~~~~~l~~i~--~P~lvi~G~~D~~~~~~~~~~~~~~~--~~-----~~~~~i 268 (294)
T PLN02824 216 DFIS------YSGG------------PLPEELLPAVK--CPVLIAWGEKDPWEPVELGRAYANFD--AV-----EDFIVL 268 (294)
T ss_pred HHhc------cccc------------cchHHHHhhcC--CCeEEEEecCCCCCChHHHHHHHhcC--Cc-----cceEEe
Confidence 1111 0000 00111467777 99999999999999998 6666555 54 788999
Q ss_pred CCC-ccccccCchhHHHHHHHHHhhh
Q 035617 393 MSK-SLSFQVSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 393 ~~~-H~~~~~~~~~v~~~i~~fl~~~ 417 (422)
+++ |+.+.|+|+++.+.|.+|++++
T Consensus 269 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 269 PGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred CCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999 9999999999999999999864
No 14
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.95 E-value=4.5e-27 Score=197.19 Aligned_cols=231 Identities=19% Similarity=0.226 Sum_probs=171.0
Q ss_pred hhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHH-HHhCCCeEEE
Q 035617 60 SSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLI-LADHGFDVWI 138 (422)
Q Consensus 60 ~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~-l~~~g~~v~~ 138 (422)
..++.++.|+|.+.++|.|..+|+.+.+... .+.|++|++||++++-+... ..++. +...+.+|++
T Consensus 45 ptP~~~n~pye~i~l~T~D~vtL~a~~~~~E-------~S~pTlLyfh~NAGNmGhr~------~i~~~fy~~l~mnv~i 111 (300)
T KOG4391|consen 45 PTPKEFNMPYERIELRTRDKVTLDAYLMLSE-------SSRPTLLYFHANAGNMGHRL------PIARVFYVNLKMNVLI 111 (300)
T ss_pred CCccccCCCceEEEEEcCcceeEeeeeeccc-------CCCceEEEEccCCCcccchh------hHHHHHHHHcCceEEE
Confidence 3456789999999999999999999999854 36899999999999998853 33333 4566899999
Q ss_pred eCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhh
Q 035617 139 ANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKS 215 (422)
Q Consensus 139 ~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~ 215 (422)
+++||+|.|++.++... .+-|..+++||+..+.. .++++.|.|+||++|...|++.. +++.+
T Consensus 112 vsYRGYG~S~GspsE~G-------------L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~--~ri~~ 176 (300)
T KOG4391|consen 112 VSYRGYGKSEGSPSEEG-------------LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNS--DRISA 176 (300)
T ss_pred EEeeccccCCCCccccc-------------eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccch--hheee
Confidence 99999999999655332 45789999999988865 78999999999999999999765 79999
Q ss_pred eeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhh
Q 035617 216 AALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVD 295 (422)
Q Consensus 216 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 295 (422)
+++.+..........+. +.|. ..+.+..+|..+.
T Consensus 177 ~ivENTF~SIp~~~i~~--------------------v~p~---~~k~i~~lc~kn~----------------------- 210 (300)
T KOG4391|consen 177 IIVENTFLSIPHMAIPL--------------------VFPF---PMKYIPLLCYKNK----------------------- 210 (300)
T ss_pred eeeechhccchhhhhhe--------------------eccc---hhhHHHHHHHHhh-----------------------
Confidence 99888765432221111 1110 0111222221100
Q ss_pred hhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHH
Q 035617 296 LFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYL 373 (422)
Q Consensus 296 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l 373 (422)
|. + ++ .+.+.+ +|.|++.|.+|.+|||. +.+
T Consensus 211 -~~--------------------S-----~~-------------------ki~~~~--~P~LFiSGlkDelVPP~~Mr~L 243 (300)
T KOG4391|consen 211 -WL--------------------S-----YR-------------------KIGQCR--MPFLFISGLKDELVPPVMMRQL 243 (300)
T ss_pred -hc--------------------c-----hh-------------------hhcccc--CceEEeecCccccCCcHHHHHH
Confidence 00 0 00 122223 89999999999999999 999
Q ss_pred HHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhhh
Q 035617 374 LYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 374 ~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~ 417 (422)
++.+ ++ ..+++.++|++ |++.. .-+-.++.|.+||.+.
T Consensus 244 y~~c--~S---~~Krl~eFP~gtHNDT~-i~dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 244 YELC--PS---RTKRLAEFPDGTHNDTW-ICDGYFQAIEDFLAEV 282 (300)
T ss_pred HHhC--ch---hhhhheeCCCCccCceE-EeccHHHHHHHHHHHh
Confidence 9999 66 45899999999 99976 3356789999999875
No 15
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=4.4e-26 Score=214.39 Aligned_cols=271 Identities=14% Similarity=0.132 Sum_probs=156.9
Q ss_pred CCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 035617 77 KDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPS 156 (422)
Q Consensus 77 ~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~ 156 (422)
.||..+.+.... ++++|||+||++++...| ..++..|++++ +|+++|+||||.|+....
T Consensus 14 ~~g~~i~y~~~G----------~g~~vvllHG~~~~~~~w------~~~~~~L~~~~-~via~D~~G~G~S~~~~~---- 72 (295)
T PRK03592 14 VLGSRMAYIETG----------EGDPIVFLHGNPTSSYLW------RNIIPHLAGLG-RCLAPDLIGMGASDKPDI---- 72 (295)
T ss_pred ECCEEEEEEEeC----------CCCEEEEECCCCCCHHHH------HHHHHHHhhCC-EEEEEcCCCCCCCCCCCC----
Confidence 377666665432 257999999999999998 56777898865 999999999999976321
Q ss_pred cccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHH
Q 035617 157 QMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVI 235 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~ 235 (422)
+|++.+++ +|+.++++.+ + ++++++||||||.+++.++..+| ++|+++|+++|......... ....
T Consensus 73 -----~~~~~~~a-~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lil~~~~~~~~~~~~-~~~~ 139 (295)
T PRK03592 73 -----DYTFADHA-RYLDAWFDAL----GLDDVVLVGHDWGSALGFDWAARHP--DRVRGIAFMEAIVRPMTWDD-FPPA 139 (295)
T ss_pred -----CCCHHHHH-HHHHHHHHHh----CCCCeEEEEECHHHHHHHHHHHhCh--hheeEEEEECCCCCCcchhh-cchh
Confidence 46888877 7888877766 7 89999999999999999999776 89999999998533211100 0000
Q ss_pred HhhhcHHHHHHHhcCccccCCChh-HHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHH
Q 035617 236 AAKSFVGEITTLLGLAEFNPKGKP-VADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLA 314 (422)
Q Consensus 236 ~~~~~~~~~~~~~g~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 314 (422)
.. .....+........... ........... . ....+.++....+............+..+.
T Consensus 140 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (295)
T PRK03592 140 VR-----ELFQALRSPGEGEEMVLEENVFIERVLPG-----------S--ILRPLSDEEMAVYRRPFPTPESRRPTLSWP 201 (295)
T ss_pred HH-----HHHHHHhCcccccccccchhhHHhhcccC-----------c--ccccCCHHHHHHHHhhcCCchhhhhhhhhh
Confidence 00 00000100000000000 00000000000 0 000122222222221111111111111111
Q ss_pred HHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHH-HHhcccCCCCCceeeEE
Q 035617 315 QTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLL-YLCKLFSKSGESLNLIC 391 (422)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~-~~l~~~~~~~~~~~~~~ 391 (422)
....... +. ......+. .....+.+|+ +|||+|+|++|.++++. .++. +.+ ++ .++++
T Consensus 202 ~~~~~~~---~~----~~~~~~~~---~~~~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~--~~-----~~~~~ 262 (295)
T PRK03592 202 RELPIDG---EP----ADVVALVE---EYAQWLATSD--VPKLLINAEPGAILTTGAIRDWCRSWP--NQ-----LEITV 262 (295)
T ss_pred hhcCCCC---cc----hhhHhhhh---HhHHHhccCC--CCeEEEeccCCcccCcHHHHHHHHHhh--hh-----cceee
Confidence 1110000 00 00000000 0011356777 99999999999999444 4544 445 55 78889
Q ss_pred cCCC-ccccccCchhHHHHHHHHHhhhc
Q 035617 392 VMSK-SLSFQVSPQLKMIAVMALFQRQA 418 (422)
Q Consensus 392 i~~~-H~~~~~~~~~v~~~i~~fl~~~~ 418 (422)
++++ |+.+.+.|+++.+.|.+|+++..
T Consensus 263 i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 263 FGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred ccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 9999 99999999999999999998753
No 16
>PLN02578 hydrolase
Probab=99.94 E-value=8.6e-25 Score=210.50 Aligned_cols=257 Identities=14% Similarity=0.154 Sum_probs=145.9
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+|+|||+||++++...|. .++..|++ +|+|+++|+||||.|++... +|+..+++ +|+.++++.
T Consensus 86 g~~vvliHG~~~~~~~w~------~~~~~l~~-~~~v~~~D~~G~G~S~~~~~---------~~~~~~~a-~~l~~~i~~ 148 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWR------YNIPELAK-KYKVYALDLLGFGWSDKALI---------EYDAMVWR-DQVADFVKE 148 (354)
T ss_pred CCeEEEECCCCCCHHHHH------HHHHHHhc-CCEEEEECCCCCCCCCCccc---------ccCHHHHH-HHHHHHHHH
Confidence 578999999999998884 34455765 79999999999999986422 56777766 566665555
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHH-------HHhhhcHHHHHHHhcCc
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGV-------IAAKSFVGEITTLLGLA 251 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~ 251 (422)
+ . ++++++||||||.+++.+|.++| ++|++++++++............. .............+...
T Consensus 149 ~----~~~~~~lvG~S~Gg~ia~~~A~~~p--~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (354)
T PLN02578 149 V----VKEPAVLVGNSLGGFTALSTAVGYP--ELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRV 222 (354)
T ss_pred h----ccCCeEEEEECHHHHHHHHHHHhCh--HhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHH
Confidence 4 5 89999999999999999999776 899999999876543221110000 00000000000000000
Q ss_pred cccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCC
Q 035617 252 EFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPD 331 (422)
Q Consensus 252 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (422)
........... .......+..........++.....+...................... ....++.
T Consensus 223 --------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---- 288 (354)
T PLN02578 223 --------VLGFLFWQAKQ-PSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLF-NQSRYTL---- 288 (354)
T ss_pred --------HHHHHHHHhcC-HHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhc-CCCCCCH----
Confidence 00000000000 000001111111111112222222221111111111111111111000 0000100
Q ss_pred ccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHH
Q 035617 332 YNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMI 408 (422)
Q Consensus 332 ~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~ 408 (422)
.-.+.+++ +|+++++|++|.+++.+ +.+.+.+ ++ .+++.+ ++ |+.+.|.|+++.+
T Consensus 289 ------------~~~l~~i~--~PvLiI~G~~D~~v~~~~~~~l~~~~--p~-----a~l~~i-~~GH~~~~e~p~~~~~ 346 (354)
T PLN02578 289 ------------DSLLSKLS--CPLLLLWGDLDPWVGPAKAEKIKAFY--PD-----TTLVNL-QAGHCPHDEVPEQVNK 346 (354)
T ss_pred ------------HHHhhcCC--CCEEEEEeCCCCCCCHHHHHHHHHhC--CC-----CEEEEe-CCCCCccccCHHHHHH
Confidence 01356776 99999999999999988 7888888 77 677778 58 9999999999999
Q ss_pred HHHHHHh
Q 035617 409 AVMALFQ 415 (422)
Q Consensus 409 ~i~~fl~ 415 (422)
.|.+|++
T Consensus 347 ~I~~fl~ 353 (354)
T PLN02578 347 ALLEWLS 353 (354)
T ss_pred HHHHHHh
Confidence 9999996
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.94 E-value=5.7e-25 Score=205.31 Aligned_cols=249 Identities=14% Similarity=0.156 Sum_probs=140.6
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+|+|||+||++.+...|... ...+..+++.||+|+++|+||||.|+.... .. ..+. .++ +|+.++++.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~---~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-~~------~~~~-~~~-~~l~~~l~~ 97 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNY---YRNIGPFVDAGYRVILKDSPGFNKSDAVVM-DE------QRGL-VNA-RAVKGLMDA 97 (282)
T ss_pred CCeEEEECCCCCchhhHHHH---HHHHHHHHhCCCEEEEECCCCCCCCCCCcC-cc------cccc-hhH-HHHHHHHHH
Confidence 57899999999888777321 122334667799999999999999975321 00 0111 222 556565555
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCCh
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGK 258 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~ 258 (422)
+ + ++++++||||||.+++.++.++| ++|+++|+++|.........+... .........+.. +...
T Consensus 98 l----~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~ 163 (282)
T TIGR03343 98 L----DIEKAHLVGNSMGGATALNFALEYP--DRIGKLILMGPGGLGPSLFAPMPM----EGIKLLFKLYAE----PSYE 163 (282)
T ss_pred c----CCCCeeEEEECchHHHHHHHHHhCh--HhhceEEEECCCCCCccccccCch----HHHHHHHHHhcC----CCHH
Confidence 4 7 89999999999999999999766 899999999986321110000000 000000000000 0000
Q ss_pred hHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccC
Q 035617 259 PVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYG 338 (422)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 338 (422)
.....+...... ....+............. .......+........+..++
T Consensus 164 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------ 214 (282)
T TIGR03343 164 TLKQMLNVFLFD---------------QSLITEELLQGRWENIQR--QPEHLKNFLISSQKAPLSTWD------------ 214 (282)
T ss_pred HHHHHHhhCccC---------------cccCcHHHHHhHHHHhhc--CHHHHHHHHHhccccccccch------------
Confidence 000000000000 000111111100000000 000010110000000000011
Q ss_pred CCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHh
Q 035617 339 EFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQ 415 (422)
Q Consensus 339 ~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~ 415 (422)
..-.+++|+ +|+|+++|++|.+++++ +++.+.+ ++ .++++++++ |+.+.|.|+.+.+.|.+||+
T Consensus 215 ----~~~~l~~i~--~Pvlli~G~~D~~v~~~~~~~~~~~~--~~-----~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 215 ----VTARLGEIK--AKTLVTWGRDDRFVPLDHGLKLLWNM--PD-----AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred ----HHHHHhhCC--CCEEEEEccCCCcCCchhHHHHHHhC--CC-----CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 111466777 99999999999999988 8888888 87 889999999 99999999999999999996
Q ss_pred h
Q 035617 416 R 416 (422)
Q Consensus 416 ~ 416 (422)
+
T Consensus 282 ~ 282 (282)
T TIGR03343 282 N 282 (282)
T ss_pred C
Confidence 3
No 18
>PRK13604 luxD acyl transferase; Provisional
Probab=99.93 E-value=4.6e-25 Score=201.84 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=108.1
Q ss_pred eeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC-CCC
Q 035617 69 CQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGT-RFS 147 (422)
Q Consensus 69 ~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~-G~S 147 (422)
..++.+.+.||..|.+|+.++.+. ...+.++||++||++++... +..+|++|+++||.|+.+|+||| |.|
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~---~~~~~~~vIi~HGf~~~~~~------~~~~A~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKEN---SPKKNNTILIASGFARRMDH------FAGLAEYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCccc---CCCCCCEEEEeCCCCCChHH------HHHHHHHHHHCCCEEEEecCCCCCCCC
Confidence 366889999999999999988631 23567899999999998654 48899999999999999999998 899
Q ss_pred CCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 148 RRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
++.-. +++... ..+|+.++++|+++....+|.|+||||||.++..+|+.. .++++|+.||+..+.
T Consensus 80 ~G~~~---------~~t~s~-g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 80 SGTID---------EFTMSI-GKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLR 144 (307)
T ss_pred CCccc---------cCcccc-cHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHH
Confidence 77432 223222 358999999999775338899999999999997776632 499999999987654
No 19
>PLN02511 hydrolase
Probab=99.93 E-value=1.6e-24 Score=210.34 Aligned_cols=287 Identities=18% Similarity=0.179 Sum_probs=166.6
Q ss_pred CceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcc-cccCCCCCCHHHHHHhCCCeEEEeCCCCC
Q 035617 66 GYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLT-WLLNPPEQNLPLILADHGFDVWIANTRGT 144 (422)
Q Consensus 66 ~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~~~~~~l~~~l~~~g~~v~~~d~rG~ 144 (422)
...+++..+.++||..+.+.+....... ....+|+||++||+.+++.. | ...++..+.++||+|+++|+|||
T Consensus 68 ~~~~~re~l~~~DG~~~~ldw~~~~~~~--~~~~~p~vvllHG~~g~s~~~y-----~~~~~~~~~~~g~~vv~~d~rG~ 140 (388)
T PLN02511 68 AVRYRRECLRTPDGGAVALDWVSGDDRA--LPADAPVLILLPGLTGGSDDSY-----VRHMLLRARSKGWRVVVFNSRGC 140 (388)
T ss_pred CCceeEEEEECCCCCEEEEEecCccccc--CCCCCCEEEEECCCCCCCCCHH-----HHHHHHHHHHCCCEEEEEecCCC
Confidence 3456777899999999988665421100 12357899999999887654 5 24566667788999999999999
Q ss_pred CCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 145 RFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 145 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
|.|.... + .+.... ..+|+.++++++..+.+ .+++++||||||.+++.++.+++....|+++++++++.
T Consensus 141 G~s~~~~---~------~~~~~~-~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 141 ADSPVTT---P------QFYSAS-FTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred CCCCCCC---c------CEEcCC-chHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 9997521 1 111112 23799999999988877 79999999999999999998776222388888887654
Q ss_pred hccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCC
Q 035617 224 YLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQ 303 (422)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (422)
........+.......+...+...+ +...... ...+..+.+ ..+... .. .
T Consensus 211 ~l~~~~~~~~~~~~~~y~~~~~~~l------------~~~~~~~--------~~~~~~~~~---~~~~~~---~~----~ 260 (388)
T PLN02511 211 DLVIADEDFHKGFNNVYDKALAKAL------------RKIFAKH--------ALLFEGLGG---EYNIPL---VA----N 260 (388)
T ss_pred CHHHHHHHHhccHHHHHHHHHHHHH------------HHHHHHH--------HHHHhhCCC---ccCHHH---HH----h
Confidence 3211110000000000000000000 0000000 000000000 000000 00 0
Q ss_pred cchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh---HHHHHHhccc
Q 035617 304 STSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT---QYLLYLCKLF 380 (422)
Q Consensus 304 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~---~~l~~~l~~~ 380 (422)
. +.+..+.+.+... . +.+ .+...|.....+...+.+|+ +|+|+|+|++|+++|++ ..+.+.+ +
T Consensus 261 ~---~~~~~fd~~~t~~-~--~gf----~~~~~yy~~~s~~~~L~~I~--vPtLiI~g~dDpi~p~~~~~~~~~~~~--p 326 (388)
T PLN02511 261 A---KTVRDFDDGLTRV-S--FGF----KSVDAYYSNSSSSDSIKHVR--VPLLCIQAANDPIAPARGIPREDIKAN--P 326 (388)
T ss_pred C---CCHHHHHHhhhhh-c--CCC----CCHHHHHHHcCchhhhccCC--CCeEEEEcCCCCcCCcccCcHhHHhcC--C
Confidence 0 0111111111110 0 000 11112222222344688888 99999999999999987 3455666 6
Q ss_pred CCCCCceeeEEcCCC-ccccccCchh------HHHHHHHHHhhhc
Q 035617 381 SKSGESLNLICVMSK-SLSFQVSPQL------KMIAVMALFQRQA 418 (422)
Q Consensus 381 ~~~~~~~~~~~i~~~-H~~~~~~~~~------v~~~i~~fl~~~~ 418 (422)
+ +++++++++ |+.++|.|+. +.+.+.+||+...
T Consensus 327 ~-----~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 327 N-----CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred C-----EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 6 899999999 9999998876 4789999997753
No 20
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.93 E-value=3.6e-25 Score=200.38 Aligned_cols=304 Identities=15% Similarity=0.156 Sum_probs=175.1
Q ss_pred hhhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEE
Q 035617 59 ASSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWI 138 (422)
Q Consensus 59 ~~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~ 138 (422)
.++....+.+++...+...++..+........ ...+.++||+||++++...|..+... |++ ..+|++
T Consensus 55 ~ril~~~~v~~~~~~v~i~~~~~iw~~~~~~~------~~~~~plVliHGyGAg~g~f~~Nf~~------La~-~~~vya 121 (365)
T KOG4409|consen 55 KRILSSVPVPYSKKYVRIPNGIEIWTITVSNE------SANKTPLVLIHGYGAGLGLFFRNFDD------LAK-IRNVYA 121 (365)
T ss_pred HhhhhhcCCCcceeeeecCCCceeEEEeeccc------ccCCCcEEEEeccchhHHHHHHhhhh------hhh-cCceEE
Confidence 44556667777777777776654444333333 25689999999999999999988876 877 899999
Q ss_pred eCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhhee
Q 035617 139 ANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAA 217 (422)
Q Consensus 139 ~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v 217 (422)
+|++|+|+|.++.-... .+..+ .-....|+.-++..+ .++.|+|||+||.+|..||.++| ++|+.+|
T Consensus 122 iDllG~G~SSRP~F~~d-------~~~~e---~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyP--erV~kLi 189 (365)
T KOG4409|consen 122 IDLLGFGRSSRPKFSID-------PTTAE---KEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYP--ERVEKLI 189 (365)
T ss_pred ecccCCCCCCCCCCCCC-------cccch---HHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhCh--HhhceEE
Confidence 99999999988543221 11111 122245555667778 99999999999999999999766 9999999
Q ss_pred eecchhhccch-hhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCC-CCCCchhhh
Q 035617 218 LLSPIAYLSYM-RTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRN-CCLNSSTVD 295 (422)
Q Consensus 218 ~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~ 295 (422)
|++|++..... ..+...-....+...+.... ..+.|. .+++.+-.--+-.|.++.+-....- ....++.+.
T Consensus 190 LvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~--~~~nPl-----~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~ 262 (365)
T KOG4409|consen 190 LVSPWGFPEKPDSEPEFTKPPPEWYKALFLVA--TNFNPL-----ALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLH 262 (365)
T ss_pred EecccccccCCCcchhhcCCChHHHhhhhhhh--hcCCHH-----HHHHhccccchHHHhhhhHHHHHhccccchhHHHH
Confidence 99999877644 11111000000000000000 011111 0111111000111221111111100 011222223
Q ss_pred hhhhcC-CCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh-HHH
Q 035617 296 LFLRNE-PQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT-QYL 373 (422)
Q Consensus 296 ~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~-~~l 373 (422)
.|..+. ....+-+.... .++..+. +.. .|-...+..++.+||+++|+|++|++-... .++
T Consensus 263 ~YiY~~n~~~psgE~~fk--~l~~~~g-----~Ar-----------~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~ 324 (365)
T KOG4409|consen 263 EYIYHCNAQNPSGETAFK--NLFEPGG-----WAR-----------RPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEV 324 (365)
T ss_pred HHHHHhcCCCCcHHHHHH--HHHhccc-----hhh-----------hhHHHHHHhhccCCCEEEEecCcccccchhHHHH
Confidence 332221 11122222211 1111111 100 011112333333499999999999886555 777
Q ss_pred HHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhhh
Q 035617 374 LYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 374 ~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~ 417 (422)
.+.+ .. ..++.+++|++ |..+.++|+.+++.+++++++.
T Consensus 325 ~~~~--~~---~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 325 TKSL--MK---EYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHh--hc---ccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 7765 44 25899999999 9999999999999999999764
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=1.8e-24 Score=208.58 Aligned_cols=259 Identities=18% Similarity=0.233 Sum_probs=146.0
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
.+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|++... . .|++.+++ +|+.++++
T Consensus 87 ~gp~lvllHG~~~~~~~w------~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-----~---~~~~~~~a-~~l~~~l~ 150 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHW------RRNIGVLAK-NYTVYAIDLLGFGASDKPPG-----F---SYTMETWA-ELILDFLE 150 (360)
T ss_pred CCCeEEEECCCCCCHHHH------HHHHHHHhc-CCEEEEECCCCCCCCCCCCC-----c---cccHHHHH-HHHHHHHH
Confidence 358999999999999998 445556866 89999999999999976321 0 56777777 67666666
Q ss_pred HHHHHhC-CeEEEEEeChhHHHHHHHHhc-cchhhhHhheeeecchhhccchh--hHHHHHHhhhcHHHHHHHhcCcccc
Q 035617 179 HVYEQTG-QKIHYVGHSLGTLIALASFSE-GLQVDKLKSAALLSPIAYLSYMR--TALGVIAAKSFVGEITTLLGLAEFN 254 (422)
Q Consensus 179 ~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~-~~~~~~v~~~v~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~ 254 (422)
.+ + ++++|+||||||.+++.++.. +| ++|+++|+++|........ ..............+.......
T Consensus 151 ~l----~~~~~~lvGhS~Gg~ia~~~a~~~~P--~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 221 (360)
T PLN02679 151 EV----VQKPTVLIGNSVGSLACVIAASESTR--DLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR--- 221 (360)
T ss_pred Hh----cCCCeEEEEECHHHHHHHHHHHhcCh--hhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch---
Confidence 54 6 899999999999999988764 44 7999999999865322110 0000000000000000000000
Q ss_pred CCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccc
Q 035617 255 PKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNL 334 (422)
Q Consensus 255 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (422)
.....++..... ......++....+.....+++....+............+ ...... . ...+
T Consensus 222 ---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~-~~~~-------- 283 (360)
T PLN02679 222 ---GIASALFNRVKQ--RDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAF---VSIVTG-P-PGPN-------- 283 (360)
T ss_pred ---hhHHHHHHHhcC--HHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHH---HHHHhc-C-CCCC--------
Confidence 000000000000 000011111111111112222222221111111111111 111110 0 0000
Q ss_pred cccCCCCCccccCCCCCCCccEEEEEeCCCccCChh-------HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhH
Q 035617 335 MHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT-------QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLK 406 (422)
Q Consensus 335 ~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~-------~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v 406 (422)
..-.+.+|+ +|||+++|++|.++|++ +.+.+.+ ++ .+++++|++ |+.+.|.|+++
T Consensus 284 --------~~~~l~~i~--~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i--p~-----~~l~~i~~aGH~~~~E~Pe~~ 346 (360)
T PLN02679 284 --------PIKLIPRIS--LPILVLWGDQDPFTPLDGPVGKYFSSLPSQL--PN-----VTLYVLEGVGHCPHDDRPDLV 346 (360)
T ss_pred --------HHHHhhhcC--CCEEEEEeCCCCCcCchhhHHHHHHhhhccC--Cc-----eEEEEcCCCCCCccccCHHHH
Confidence 001456777 99999999999999875 1344455 55 889999999 99999999999
Q ss_pred HHHHHHHHhhh
Q 035617 407 MIAVMALFQRQ 417 (422)
Q Consensus 407 ~~~i~~fl~~~ 417 (422)
++.|.+||++.
T Consensus 347 ~~~I~~FL~~~ 357 (360)
T PLN02679 347 HEKLLPWLAQL 357 (360)
T ss_pred HHHHHHHHHhc
Confidence 99999999863
No 22
>PLN02965 Probable pheophorbidase
Probab=99.93 E-value=1.3e-24 Score=199.90 Aligned_cols=241 Identities=15% Similarity=0.156 Sum_probs=146.1
Q ss_pred CcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHH
Q 035617 101 PPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHV 180 (422)
Q Consensus 101 ~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i 180 (422)
-+|||+||++.+...| ..++..|+++||+|+++|+||||.|..... . .+++++++ +|+.++++.+
T Consensus 4 ~~vvllHG~~~~~~~w------~~~~~~L~~~~~~via~Dl~G~G~S~~~~~--~------~~~~~~~a-~dl~~~l~~l 68 (255)
T PLN02965 4 IHFVFVHGASHGAWCW------YKLATLLDAAGFKSTCVDLTGAGISLTDSN--T------VSSSDQYN-RPLFALLSDL 68 (255)
T ss_pred eEEEEECCCCCCcCcH------HHHHHHHhhCCceEEEecCCcCCCCCCCcc--c------cCCHHHHH-HHHHHHHHhc
Confidence 3599999999999888 456677878899999999999999975321 1 46788877 7888877765
Q ss_pred HHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchh-hH-HHHHHhhhcHHHHHHH-hcCccccC
Q 035617 181 YEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMR-TA-LGVIAAKSFVGEITTL-LGLAEFNP 255 (422)
Q Consensus 181 ~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~-~~-~~~~~~~~~~~~~~~~-~g~~~~~p 255 (422)
+ ++++++||||||.+++.++.++| ++|+++|++++........ .. ........ ...... ++...-.+
T Consensus 69 ----~~~~~~~lvGhSmGG~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 140 (255)
T PLN02965 69 ----PPDHKVILVGHSIGGGSVTEALCKFT--DKISMAIYVAAAMVKPGSIISPRLKNVMEGT--EKIWDYTFGEGPDKP 140 (255)
T ss_pred ----CCCCCEEEEecCcchHHHHHHHHhCc--hheeEEEEEccccCCCCCCccHHHHhhhhcc--ccceeeeeccCCCCC
Confidence 5 49999999999999999999776 8999999999863211110 00 00000000 000000 00000000
Q ss_pred CChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhh-hhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccc
Q 035617 256 KGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLF-LRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNL 334 (422)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (422)
..... ........+ ... ....................+ ...
T Consensus 141 ~~~~~----------------------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~------~~~ 182 (255)
T PLN02965 141 PTGIM----------------------------MKPEFVRHYYYNQ----SPLEDYTLSSKLLRPAPVRAF------QDL 182 (255)
T ss_pred cchhh----------------------------cCHHHHHHHHhcC----CCHHHHHHHHHhcCCCCCcch------hhh
Confidence 00000 000000000 000 000000000111111000000 000
Q ss_pred cccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHH
Q 035617 335 MHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVM 411 (422)
Q Consensus 335 ~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~ 411 (422)
..+ ...+..++ +|+++++|++|.++|++ +.+.+.+ ++ .++++++++ |+.++|+|++|.+.|.
T Consensus 183 ~~~------~~~~~~i~--vP~lvi~g~~D~~~~~~~~~~~~~~~--~~-----a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 183 DKL------PPNPEAEK--VPRVYIKTAKDNLFDPVRQDVMVENW--PP-----AQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred hhc------cchhhcCC--CCEEEEEcCCCCCCCHHHHHHHHHhC--Cc-----ceEEEecCCCCchhhcCHHHHHHHHH
Confidence 000 01344566 99999999999999999 8888898 87 788999999 9999999999999999
Q ss_pred HHHhhh
Q 035617 412 ALFQRQ 417 (422)
Q Consensus 412 ~fl~~~ 417 (422)
+|+++.
T Consensus 248 ~~~~~~ 253 (255)
T PLN02965 248 QAVSSL 253 (255)
T ss_pred HHHHHh
Confidence 998753
No 23
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.92 E-value=4.2e-24 Score=199.72 Aligned_cols=124 Identities=19% Similarity=0.278 Sum_probs=90.9
Q ss_pred ceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCC
Q 035617 67 YKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRF 146 (422)
Q Consensus 67 ~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~ 146 (422)
++.+...+++ +|..+++.. .+ ++|+|||+||++.+...| ..++..|.+ +|+|+++|+||||.
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~--~G--------~~~~iv~lHG~~~~~~~~------~~~~~~l~~-~~~vi~~D~~G~G~ 73 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYID--EG--------TGPPILLCHGNPTWSFLY------RDIIVALRD-RFRCVAPDYLGFGL 73 (286)
T ss_pred ccccceEEEc-CCcEEEEEE--CC--------CCCEEEEECCCCccHHHH------HHHHHHHhC-CcEEEEECCCCCCC
Confidence 4456666766 555555443 33 257999999999888887 445666765 79999999999999
Q ss_pred CCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 147 SRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 147 S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
|+.... . ++++.+++ .|+.+ +.+..+ ++++++||||||.+++.++..+| ++|+++|++++..
T Consensus 74 S~~~~~--~------~~~~~~~~-~~~~~----~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p--~~v~~lvl~~~~~ 136 (286)
T PRK03204 74 SERPSG--F------GYQIDEHA-RVIGE----FVDHLGLDRYLSMGQDWGGPISMAVAVERA--DRVRGVVLGNTWF 136 (286)
T ss_pred CCCCCc--c------ccCHHHHH-HHHHH----HHHHhCCCCEEEEEECccHHHHHHHHHhCh--hheeEEEEECccc
Confidence 976321 0 34566655 44444 445558 89999999999999999988766 8999999988754
No 24
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.92 E-value=1e-23 Score=193.26 Aligned_cols=243 Identities=19% Similarity=0.214 Sum_probs=145.6
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
.++|+||++||+++++..| ..++..|.+ ||+|+++|+||||.|..... . .+++++++ +|+.+++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~------~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~--~------~~~~~~~~-~~~~~~i 74 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYW------APQLDVLTQ-RFHVVTYDHRGTGRSPGELP--P------GYSIAHMA-DDVLQLL 74 (257)
T ss_pred CCCCEEEEEcCCCcchhHH------HHHHHHHHh-ccEEEEEcCCCCCCCCCCCc--c------cCCHHHHH-HHHHHHH
Confidence 3578999999999999888 445566765 89999999999999975321 1 46777766 6777766
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCC
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPK 256 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 256 (422)
+.+ + ++++++||||||.+++.++..++ ++|+++|++++.............. . ..+....+...+.
T Consensus 75 ~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~--~~v~~~i~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~-- 141 (257)
T TIGR03611 75 DAL----NIERFHFVGHALGGLIGLQLALRYP--ERLLSLVLINAWSRPDPHTRRCFDV----R-IALLQHAGPEAYV-- 141 (257)
T ss_pred HHh----CCCcEEEEEechhHHHHHHHHHHCh--HHhHHheeecCCCCCChhHHHHHHH----H-HHHHhccCcchhh--
Confidence 655 7 89999999999999999998765 7899999999865432111100000 0 0000000000000
Q ss_pred ChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccc
Q 035617 257 GKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMH 336 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (422)
......+. .. ..+ ............. ..... ...+.......... .++..
T Consensus 142 ----~~~~~~~~-~~-----~~~---~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~-----~~~~~-------- 191 (257)
T TIGR03611 142 ----HAQALFLY-PA-----DWI---SENAARLAADEAH-ALAHF---PGKANVLRRINALE-----AFDVS-------- 191 (257)
T ss_pred ----hhhhhhhc-cc-----cHh---hccchhhhhhhhh-ccccc---CccHHHHHHHHHHH-----cCCcH--------
Confidence 00000000 00 000 0000000000000 00000 00011110001111 01111
Q ss_pred cCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHH
Q 035617 337 YGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMAL 413 (422)
Q Consensus 337 y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~f 413 (422)
..+.+++ +|+++++|++|.++|++ +++.+.+ ++ .+++.++++ |..+.+.|+++.+.|.+|
T Consensus 192 --------~~~~~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~--~~-----~~~~~~~~~gH~~~~~~~~~~~~~i~~f 254 (257)
T TIGR03611 192 --------ARLDRIQ--HPVLLIANRDDMLVPYTQSLRLAAAL--PN-----AQLKLLPYGGHASNVTDPETFNRALLDF 254 (257)
T ss_pred --------HHhcccC--ccEEEEecCcCcccCHHHHHHHHHhc--CC-----ceEEEECCCCCCccccCHHHHHHHHHHH
Confidence 1456676 99999999999999998 8888888 77 788899999 999999999999999999
Q ss_pred Hhh
Q 035617 414 FQR 416 (422)
Q Consensus 414 l~~ 416 (422)
|++
T Consensus 255 l~~ 257 (257)
T TIGR03611 255 LKT 257 (257)
T ss_pred hcC
Confidence 964
No 25
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.92 E-value=2.6e-23 Score=200.01 Aligned_cols=278 Identities=14% Similarity=0.147 Sum_probs=164.6
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..+++||++||+..+...+... +..+++++|+++||+|+++|+||+|.|.. .++++++..+|+.+++
T Consensus 60 ~~~~pvl~v~~~~~~~~~~d~~-~~~~~~~~L~~~G~~V~~~D~~g~g~s~~------------~~~~~d~~~~~~~~~v 126 (350)
T TIGR01836 60 THKTPLLIVYALVNRPYMLDLQ-EDRSLVRGLLERGQDVYLIDWGYPDRADR------------YLTLDDYINGYIDKCV 126 (350)
T ss_pred CCCCcEEEeccccccceeccCC-CCchHHHHHHHCCCeEEEEeCCCCCHHHh------------cCCHHHHHHHHHHHHH
Confidence 3467899999987666555433 45899999999999999999999997754 4577888878899999
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCC
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPK 256 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 256 (422)
+++.+..+ ++++++||||||.+++.+++.++ ++|+++++++|+...................+.....+|. +|.
T Consensus 127 ~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~--~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~ 201 (350)
T TIGR01836 127 DYICRTSKLDQISLLGICQGGTFSLCYAALYP--DKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGN---IPG 201 (350)
T ss_pred HHHHHHhCCCcccEEEECHHHHHHHHHHHhCc--hheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCC---CCH
Confidence 99999988 99999999999999999988766 7899999999887654322222111111111111122221 111
Q ss_pred ChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhh------hhcCCCcchHHHHHHHHHHH-hcCCeeeecCCC
Q 035617 257 GKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLF------LRNEPQSTSTKNMVHLAQTV-RDGVIAKFNYGR 329 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~ 329 (422)
. .....+ .+.......+......... ..+++.+..+ ....+ ....+.+..+...+ ....+.. +
T Consensus 202 ~-~~~~~f-~~l~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~w~~d~~-~~~~~~~~~~~~~~~~~n~l~~---g- 271 (350)
T TIGR01836 202 E-LLNLTF-LMLKPFSLGYQKYVNLVDI---LEDERKVENFLRMEKWIFDSP-DQAGEAFRQFVKDFYQQNGLIN---G- 271 (350)
T ss_pred H-HHHHHH-HhcCcchhhhHHHHHHHHh---cCChHHHHHHHHHHHHhcCCc-CccHHHHHHHHHHHHhcCcccC---C-
Confidence 0 000000 0111101011111111000 0111111111 11111 12222333332222 1111100 0
Q ss_pred CCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCCccccc---cCch
Q 035617 330 PDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSKSLSFQ---VSPQ 404 (422)
Q Consensus 330 ~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~H~~~~---~~~~ 404 (422)
.....+ -...+++++ +|+++++|++|.++|++ +.+.+.+ ++ ..++++.++++|..++ +.++
T Consensus 272 ---~~~~~~----~~~~l~~i~--~Pvliv~G~~D~i~~~~~~~~~~~~~--~~---~~~~~~~~~~gH~~~~~~~~~~~ 337 (350)
T TIGR01836 272 ---EVEIGG----RKVDLKNIK--MPILNIYAERDHLVPPDASKALNDLV--SS---EDYTELSFPGGHIGIYVSGKAQK 337 (350)
T ss_pred ---eeEECC----EEccHHhCC--CCeEEEecCCCCcCCHHHHHHHHHHc--CC---CCeEEEEcCCCCEEEEECchhHh
Confidence 000000 012466777 99999999999999998 8888888 64 2467777874577776 3468
Q ss_pred hHHHHHHHHHhhh
Q 035617 405 LKMIAVMALFQRQ 417 (422)
Q Consensus 405 ~v~~~i~~fl~~~ 417 (422)
++++.|.+||+++
T Consensus 338 ~v~~~i~~wl~~~ 350 (350)
T TIGR01836 338 EVPPAIGKWLQAR 350 (350)
T ss_pred hhhHHHHHHHHhC
Confidence 9999999999864
No 26
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.92 E-value=9.5e-24 Score=194.01 Aligned_cols=234 Identities=16% Similarity=0.189 Sum_probs=145.1
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..+|+||++||++++...| ..++..|++ +|+|+++|+||||.|.... .+++.+++ +|+.+++
T Consensus 14 ~~~~~iv~lhG~~~~~~~~------~~~~~~l~~-~~~vi~~D~~G~G~s~~~~----------~~~~~~~~-~d~~~~l 75 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNL------GVLARDLVN-DHDIIQVDMRNHGLSPRDP----------VMNYPAMA-QDLLDTL 75 (255)
T ss_pred CCCCCEEEECCCCCchhHH------HHHHHHHhh-CCeEEEECCCCCCCCCCCC----------CCCHHHHH-HHHHHHH
Confidence 4579999999999999887 556777865 7999999999999997521 56888877 7888877
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCC
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPK 256 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 256 (422)
+.+ + ++++++||||||.+++.++...+ ++|++++++++.......... .... ..+...... .. ..
T Consensus 76 ~~l----~~~~~~lvGhS~Gg~va~~~a~~~~--~~v~~lvli~~~~~~~~~~~~-~~~~-----~~~~~~~~~-~~-~~ 141 (255)
T PRK10673 76 DAL----QIEKATFIGHSMGGKAVMALTALAP--DRIDKLVAIDIAPVDYHVRRH-DEIF-----AAINAVSEA-GA-TT 141 (255)
T ss_pred HHc----CCCceEEEEECHHHHHHHHHHHhCH--hhcceEEEEecCCCCccchhh-HHHH-----HHHHHhhhc-cc-cc
Confidence 776 7 88999999999999999998765 799999998643211100000 0000 000000000 00 00
Q ss_pred ChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhh-cCCCc---chHHHHHHHHHHHhcCCeeeecCCCCCc
Q 035617 257 GKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLR-NEPQS---TSTKNMVHLAQTVRDGVIAKFNYGRPDY 332 (422)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (422)
.......+.... .......+.. ..... .............
T Consensus 142 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 185 (255)
T PRK10673 142 RQQAAAIMRQHL---------------------NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHI--------------- 185 (255)
T ss_pred HHHHHHHHHHhc---------------------CCHHHHHHHHhcCCcceeEeeHHHHHHhHHHH---------------
Confidence 000000000000 0000000000 00000 0000000000000
Q ss_pred cccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHH
Q 035617 333 NLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIA 409 (422)
Q Consensus 333 ~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~ 409 (422)
..+ -.+.+++ +|+|+|+|++|.+++++ +.+.+.+ ++ .++++++++ |..+.+.|+++.+.
T Consensus 186 --~~~-------~~~~~~~--~P~l~i~G~~D~~~~~~~~~~~~~~~--~~-----~~~~~~~~~gH~~~~~~p~~~~~~ 247 (255)
T PRK10673 186 --VGW-------EKIPAWP--HPALFIRGGNSPYVTEAYRDDLLAQF--PQ-----ARAHVIAGAGHWVHAEKPDAVLRA 247 (255)
T ss_pred --hCC-------cccCCCC--CCeEEEECCCCCCCCHHHHHHHHHhC--CC-----cEEEEeCCCCCeeeccCHHHHHHH
Confidence 000 0344565 99999999999999988 7788888 77 888999999 99999999999999
Q ss_pred HHHHHhhh
Q 035617 410 VMALFQRQ 417 (422)
Q Consensus 410 i~~fl~~~ 417 (422)
|.+||+++
T Consensus 248 l~~fl~~~ 255 (255)
T PRK10673 248 IRRYLNDK 255 (255)
T ss_pred HHHHHhcC
Confidence 99999863
No 27
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.92 E-value=4.6e-24 Score=209.13 Aligned_cols=126 Identities=21% Similarity=0.267 Sum_probs=92.6
Q ss_pred ECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHH---hCCCeEEEeCCCCCCCCCCCC
Q 035617 75 TTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILA---DHGFDVWIANTRGTRFSRRHT 151 (422)
Q Consensus 75 ~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~---~~g~~v~~~d~rG~G~S~~~~ 151 (422)
.+..|..++++...+.+ ...+|+|||+||++++...|.. .+...|+ +++|+|+++|+||||.|.+..
T Consensus 181 ~~~~~~~l~~~~~gp~~-----~~~k~~VVLlHG~~~s~~~W~~-----~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~ 250 (481)
T PLN03087 181 LSSSNESLFVHVQQPKD-----NKAKEDVLFIHGFISSSAFWTE-----TLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA 250 (481)
T ss_pred EeeCCeEEEEEEecCCC-----CCCCCeEEEECCCCccHHHHHH-----HHHHHHHHHhhCCCEEEEECCCCCCCCcCCC
Confidence 33345667776655442 1346899999999999998842 2223344 369999999999999997532
Q ss_pred CCCCCcccccccChHHHHhchHH-HHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 152 SLDPSQMEFWNWSWDELVAYDLP-AVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~D~~-~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
. ..|++++++ +|+. +++ +..+ ++++++||||||.+++.++.++| ++|+++|+++|..+.
T Consensus 251 ~--------~~ytl~~~a-~~l~~~ll----~~lg~~k~~LVGhSmGG~iAl~~A~~~P--e~V~~LVLi~~~~~~ 311 (481)
T PLN03087 251 D--------SLYTLREHL-EMIERSVL----ERYKVKSFHIVAHSLGCILALALAVKHP--GAVKSLTLLAPPYYP 311 (481)
T ss_pred C--------CcCCHHHHH-HHHHHHHH----HHcCCCCEEEEEECHHHHHHHHHHHhCh--HhccEEEEECCCccc
Confidence 1 146777776 5553 433 4458 99999999999999999999776 899999999986543
No 28
>PRK06489 hypothetical protein; Provisional
Probab=99.92 E-value=4.8e-23 Score=198.93 Aligned_cols=112 Identities=18% Similarity=0.204 Sum_probs=80.3
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHH-------HhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhch
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLIL-------ADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYD 172 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l-------~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D 172 (422)
+|+|||+||++++...|.. ..+...| ..++|+|+++|+||||.|+..... ....+..|++++++ +|
T Consensus 69 gpplvllHG~~~~~~~~~~----~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~--~~~~~~~~~~~~~a-~~ 141 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLS----PTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG--LRAAFPRYDYDDMV-EA 141 (360)
T ss_pred CCeEEEeCCCCCchhhhcc----chhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC--CCCCCCcccHHHHH-HH
Confidence 6899999999999888731 2343333 235899999999999999753211 00111246777776 44
Q ss_pred HHHHHHHHHHHhC-CeEE-EEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 173 LPAVFDHVYEQTG-QKIH-YVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 173 ~~~~i~~i~~~~~-~~i~-l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
+.+ .+.+..+ ++++ ++||||||++++.++.++| ++|+++|++++..
T Consensus 142 ~~~---~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P--~~V~~LVLi~s~~ 189 (360)
T PRK06489 142 QYR---LVTEGLGVKHLRLILGTSMGGMHAWMWGEKYP--DFMDALMPMASQP 189 (360)
T ss_pred HHH---HHHHhcCCCceeEEEEECHHHHHHHHHHHhCc--hhhheeeeeccCc
Confidence 433 2334447 7875 8999999999999999877 8999999998753
No 29
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=6.5e-24 Score=179.73 Aligned_cols=222 Identities=16% Similarity=0.172 Sum_probs=159.3
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+.+|||+||+.|+..+. +.|+++|.++||.|+++.+||||.... .|...+++++. .|+.+..++
T Consensus 15 ~~AVLllHGFTGt~~Dv------r~Lgr~L~e~GyTv~aP~ypGHG~~~e---------~fl~t~~~DW~-~~v~d~Y~~ 78 (243)
T COG1647 15 NRAVLLLHGFTGTPRDV------RMLGRYLNENGYTVYAPRYPGHGTLPE---------DFLKTTPRDWW-EDVEDGYRD 78 (243)
T ss_pred CEEEEEEeccCCCcHHH------HHHHHHHHHCCceEecCCCCCCCCCHH---------HHhcCCHHHHH-HHHHHHHHH
Confidence 47999999999999984 889999999999999999999996643 23355778877 888899999
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCCh
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGK 258 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~ 258 (422)
+.+. + +.|.++|.||||..++.+|...| ++++|.+|++.........+..+. .++......
T Consensus 79 L~~~-gy~eI~v~GlSmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~~l---------~y~~~~kk~---- 140 (243)
T COG1647 79 LKEA-GYDEIAVVGLSMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEGLL---------EYFRNAKKY---- 140 (243)
T ss_pred HHHc-CCCeEEEEeecchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHHHH---------HHHHHhhhc----
Confidence 9544 5 99999999999999999988765 899999998765443322221111 111000000
Q ss_pred hHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCC--CcchHHHHHHHHHHHhcCCeeeecCCCCCccccc
Q 035617 259 PVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEP--QSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMH 336 (422)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (422)
...+.+.+...+...- ....+..+.++....+.
T Consensus 141 ----------------------------e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~----------------- 175 (243)
T COG1647 141 ----------------------------EGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARR----------------- 175 (243)
T ss_pred ----------------------------cCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHh-----------------
Confidence 0122222222222211 12223334343333332
Q ss_pred cCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc-cCchhHHHHHHH
Q 035617 337 YGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ-VSPQLKMIAVMA 412 (422)
Q Consensus 337 y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~-~~~~~v~~~i~~ 412 (422)
.+..|. .|++++.|++|.++|.+ ..+++++ .. ..+++.+++++ |.... +..+.+.+.|++
T Consensus 176 ---------~~~~I~--~pt~vvq~~~D~mv~~~sA~~Iy~~v--~s---~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~ 239 (243)
T COG1647 176 ---------SLDKIY--SPTLVVQGRQDEMVPAESANFIYDHV--ES---DDKELKWLEGSGHVITLDKERDQVEEDVIT 239 (243)
T ss_pred ---------hhhhcc--cchhheecccCCCCCHHHHHHHHHhc--cC---CcceeEEEccCCceeecchhHHHHHHHHHH
Confidence 567787 89999999999999999 8888888 43 35899999999 99988 778999999999
Q ss_pred HHhh
Q 035617 413 LFQR 416 (422)
Q Consensus 413 fl~~ 416 (422)
||+.
T Consensus 240 FL~~ 243 (243)
T COG1647 240 FLEK 243 (243)
T ss_pred HhhC
Confidence 9974
No 30
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.91 E-value=2.7e-23 Score=195.58 Aligned_cols=287 Identities=21% Similarity=0.235 Sum_probs=160.1
Q ss_pred eEEEEECCCCc-EEEEEEeeCCCC-CCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhC-CCeEEEeCCCCCCC
Q 035617 70 QEIDVTTKDGY-ILNLQRIPEGRA-AGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADH-GFDVWIANTRGTRF 146 (422)
Q Consensus 70 e~~~v~t~dG~-~l~~~~~~~~~~-~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~-g~~v~~~d~rG~G~ 146 (422)
+...+....|. .....+++.... ....+..+++||++|||+++...|..+.+. |.++ |+.|+++|..|+|+
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~------L~~~~~~~v~aiDl~G~g~ 99 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPL------LSKAKGLRVLAIDLPGHGY 99 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccc------cccccceEEEEEecCCCCc
Confidence 44455566664 344444444310 000114689999999999999999777664 6554 59999999999996
Q ss_pred CCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhhee---eecch
Q 035617 147 SRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAA---LLSPI 222 (422)
Q Consensus 147 S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v---~~~p~ 222 (422)
|...+... .|+..+.. ..+..+..+.. .+++++|||+||.+|+.+|+..| +.|++++ +++|.
T Consensus 100 ~s~~~~~~-------~y~~~~~v-----~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P--~~V~~lv~~~~~~~~ 165 (326)
T KOG1454|consen 100 SSPLPRGP-------LYTLRELV-----ELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYP--ETVDSLVLLDLLGPP 165 (326)
T ss_pred CCCCCCCC-------ceehhHHH-----HHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCc--ccccceeeecccccc
Confidence 54322211 34555544 33333334445 78999999999999999999776 8999999 77776
Q ss_pred hhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccC---CccchhhhhhhhcCCCCCCCchhhhhhhh
Q 035617 223 AYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTN---PVVNCYDLLTSLTGRNCCLNSSTVDLFLR 299 (422)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 299 (422)
.................+........-.....+.......+...++.. ...........+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 230 (326)
T KOG1454|consen 166 VYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSR--------------- 230 (326)
T ss_pred cccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheec---------------
Confidence 654433322221111111000000000000000000111111111110 00000000000000
Q ss_pred cCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHh
Q 035617 300 NEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLC 377 (422)
Q Consensus 300 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l 377 (422)
.. + .+ ..+......+...... .....-.+.+|. +||+|+++|++|.++|.+ +.+.+++
T Consensus 231 ~~------~--~~---~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~-~~pvlii~G~~D~~~p~~~~~~~~~~~ 290 (326)
T KOG1454|consen 231 PV------K--EH---FHRDARLSLFLELLGF--------DENLLSLIKKIW-KCPVLIIWGDKDQIVPLELAEELKKKL 290 (326)
T ss_pred cc------c--cc---hhhhheeeEEEeccCc--------cchHHHhhcccc-CCceEEEEcCcCCccCHHHHHHHHhhC
Confidence 00 0 00 0001111111111100 000111344554 599999999999999999 8888888
Q ss_pred cccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhhhc
Q 035617 378 KLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQA 418 (422)
Q Consensus 378 ~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~~ 418 (422)
++ +++++++++ |+.++|.|+++++.|..|+.++.
T Consensus 291 --pn-----~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 291 --PN-----AELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred --CC-----ceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 88 999999999 99999999999999999998753
No 31
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.91 E-value=3.7e-23 Score=196.85 Aligned_cols=273 Identities=14% Similarity=0.123 Sum_probs=162.1
Q ss_pred EECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcc-ccc-C--------------CCC----CCHHHHHHhCC
Q 035617 74 VTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLT-WLL-N--------------PPE----QNLPLILADHG 133 (422)
Q Consensus 74 v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~-~--------------~~~----~~l~~~l~~~g 133 (422)
+++.||..|.++.+.+. .++.+|+++||+++++.. +.. + ..+ ..+++.|.++|
T Consensus 2 ~~~~~g~~l~~~~~~~~-------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G 74 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNG 74 (332)
T ss_pred ccCCCCCeEEEeeeecc-------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCC
Confidence 46779999988887664 257899999999998862 110 0 001 36899999999
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHH-------------------h--CCeEEEEE
Q 035617 134 FDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQ-------------------T--GQKIHYVG 192 (422)
Q Consensus 134 ~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~-------------------~--~~~i~l~G 192 (422)
|+|+++|+||||.|.+..... .+ -.++++++ +|+.++++.+.+. . +.+++++|
T Consensus 75 ~~V~~~D~rGHG~S~~~~~~~----g~-~~~~~~~v-~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~G 148 (332)
T TIGR01607 75 YSVYGLDLQGHGESDGLQNLR----GH-INCFDDLV-YDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIG 148 (332)
T ss_pred CcEEEecccccCCCccccccc----cc-hhhHHHHH-HHHHHHHHHhhhhhccccccccccccccccccccCCCceeEee
Confidence 999999999999998642111 00 12677777 8999999988652 2 26899999
Q ss_pred eChhHHHHHHHHhccchh------hhHhheeeecchhhccchhhH----HHHHHhhhcHHHHHHHhcCccccCCChhHHH
Q 035617 193 HSLGTLIALASFSEGLQV------DKLKSAALLSPIAYLSYMRTA----LGVIAAKSFVGEITTLLGLAEFNPKGKPVAD 262 (422)
Q Consensus 193 ~S~Gg~~a~~~~~~~~~~------~~v~~~v~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~ 262 (422)
|||||.+++.++...+.. ..++++|+++|+..+.....+ .... .......+ . .+.|......
T Consensus 149 hSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~-~~~l~~~~-~-----~~~p~~~~~~- 220 (332)
T TIGR01607 149 LSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYF-YLPVMNFM-S-----RVFPTFRISK- 220 (332)
T ss_pred ccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhh-HHHHHHHH-H-----HHCCcccccC-
Confidence 999999999987643211 158999999987543211100 0000 00000000 0 0111100000
Q ss_pred HHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCC---CcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCC
Q 035617 263 FLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEP---QSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGE 339 (422)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 339 (422)
......++...+.+..... ...+...+......... . ..
T Consensus 221 ---------------------~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~-----~--~~---------- 262 (332)
T TIGR01607 221 ---------------------KIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDT-----L--DC---------- 262 (332)
T ss_pred ---------------------ccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHH-----H--Hh----------
Confidence 0000001111111111100 11222222222222210 0 00
Q ss_pred CCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccC-chhHHHHHHHHHh
Q 035617 340 FRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVS-PQLKMIAVMALFQ 415 (422)
Q Consensus 340 ~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~-~~~v~~~i~~fl~ 415 (422)
.+.+++.++|+|+++|++|.+++++ +.+++.+ .. ..+++++++++ |..+.|. ++++.+.|++||+
T Consensus 263 ------~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~--~~---~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 263 ------DIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKL--SI---SNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred ------hHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhc--cC---CCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 1223322389999999999999998 7777776 43 23788999999 9999964 7899999999996
Q ss_pred h
Q 035617 416 R 416 (422)
Q Consensus 416 ~ 416 (422)
.
T Consensus 332 ~ 332 (332)
T TIGR01607 332 N 332 (332)
T ss_pred C
Confidence 3
No 32
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.91 E-value=3e-23 Score=188.86 Aligned_cols=236 Identities=18% Similarity=0.221 Sum_probs=142.8
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
.+|+||++||++.+...| ..++..|. +||+|+++|+||||.|..... .+++.+++ +|+.++++
T Consensus 12 ~~~~li~~hg~~~~~~~~------~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~---------~~~~~~~~-~~~~~~i~ 74 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMW------DPVLPALT-PDFRVLRYDKRGHGLSDAPEG---------PYSIEDLA-DDVLALLD 74 (251)
T ss_pred CCCeEEEEcCcccchhhH------HHHHHHhh-cccEEEEecCCCCCCCCCCCC---------CCCHHHHH-HHHHHHHH
Confidence 478999999999998887 45666675 589999999999999864221 55777766 67766665
Q ss_pred HHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCC
Q 035617 179 HVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKG 257 (422)
Q Consensus 179 ~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~ 257 (422)
.+ + ++++++||||||.+++.+|.+.| ++|+++++++|........ .......... ..+ + .
T Consensus 75 ~~----~~~~v~liG~S~Gg~~a~~~a~~~p--~~v~~li~~~~~~~~~~~~-~~~~~~~~~~------~~~---~---~ 135 (251)
T TIGR02427 75 HL----GIERAVFCGLSLGGLIAQGLAARRP--DRVRALVLSNTAAKIGTPE-SWNARIAAVR------AEG---L---A 135 (251)
T ss_pred Hh----CCCceEEEEeCchHHHHHHHHHHCH--HHhHHHhhccCccccCchh-hHHHHHhhhh------hcc---H---H
Confidence 55 6 89999999999999999998765 7899999998764332111 1111000000 000 0 0
Q ss_pred hhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCcccccc
Q 035617 258 KPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHY 337 (422)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 337 (422)
............. .. ..........+.... ................. .+
T Consensus 136 ~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~----------- 184 (251)
T TIGR02427 136 ALADAVLERWFTP-------------GF-REAHPARLDLYRNML-VRQPPDGYAGCCAAIRD-----AD----------- 184 (251)
T ss_pred HHHHHHHHHHccc-------------cc-ccCChHHHHHHHHHH-HhcCHHHHHHHHHHHhc-----cc-----------
Confidence 0000000000000 00 000000000000000 00000000000000000 00
Q ss_pred CCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHH
Q 035617 338 GEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALF 414 (422)
Q Consensus 338 ~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl 414 (422)
....+++++ +|+++++|++|.++|++ +.+.+.+ ++ .+++.++++ |..+++.|+++.+.|.+|+
T Consensus 185 -----~~~~~~~~~--~Pvlii~g~~D~~~~~~~~~~~~~~~--~~-----~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 185 -----FRDRLGAIA--VPTLCIAGDQDGSTPPELVREIADLV--PG-----ARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred -----HHHHhhhcC--CCeEEEEeccCCcCChHHHHHHHHhC--CC-----ceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 001355666 99999999999999998 7788888 76 788999999 9999999999999999997
Q ss_pred h
Q 035617 415 Q 415 (422)
Q Consensus 415 ~ 415 (422)
+
T Consensus 251 ~ 251 (251)
T TIGR02427 251 R 251 (251)
T ss_pred C
Confidence 4
No 33
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.91 E-value=1.8e-23 Score=194.34 Aligned_cols=262 Identities=17% Similarity=0.195 Sum_probs=151.3
Q ss_pred CCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCC
Q 035617 76 TKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDP 155 (422)
Q Consensus 76 t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~ 155 (422)
+.+|..+.+...+.. .+|+||++||++++...| ..+...|++ +|+|+++|+||||.|+....
T Consensus 12 ~~~~~~~~~~~~g~~--------~~~~vv~~hG~~~~~~~~------~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~--- 73 (278)
T TIGR03056 12 TVGPFHWHVQDMGPT--------AGPLLLLLHGTGASTHSW------RDLMPPLAR-SFRVVAPDLPGHGFTRAPFR--- 73 (278)
T ss_pred eECCEEEEEEecCCC--------CCCeEEEEcCCCCCHHHH------HHHHHHHhh-CcEEEeecCCCCCCCCCccc---
Confidence 347766665544322 368999999999999988 456667866 79999999999999975321
Q ss_pred CcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccch-hhHHH
Q 035617 156 SQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYM-RTALG 233 (422)
Q Consensus 156 ~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~-~~~~~ 233 (422)
..+++.+++ .|+.++++.+ + ++++++||||||.+++.++...+ +++++++++++....... .....
T Consensus 74 -----~~~~~~~~~-~~l~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~v~~~~~~~~~~~~~~~~~ 141 (278)
T TIGR03056 74 -----FRFTLPSMA-EDLSALCAAE----GLSPDGVIGHSAGAAIALRLALDGP--VTPRMVVGINAALMPFEGMAGTLF 141 (278)
T ss_pred -----cCCCHHHHH-HHHHHHHHHc----CCCCceEEEECccHHHHHHHHHhCC--cccceEEEEcCccccccccccccc
Confidence 046777777 6777765543 6 88999999999999999998766 789999999875421100 00000
Q ss_pred HHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHH
Q 035617 234 VIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHL 313 (422)
Q Consensus 234 ~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 313 (422)
.... ..+....+.+ ........... .....+. ......+......+............ .
T Consensus 142 ~~~~--------~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 200 (278)
T TIGR03056 142 PYMA--------RVLACNPFTP------PMMSRGAADQQ-RVERLIR---DTGSLLDKAGMTYYGRLIRSPAHVDG---A 200 (278)
T ss_pred chhh--------Hhhhhcccch------HHHHhhcccCc-chhHHhh---ccccccccchhhHHHHhhcCchhhhH---H
Confidence 0000 0000000000 00000000000 0000000 00000000000000000000000000 0
Q ss_pred HHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEE
Q 035617 314 AQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLIC 391 (422)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~ 391 (422)
...... ++. .+....+++++ +|+++++|++|.++|++ +.+.+.+ ++ .++..
T Consensus 201 ~~~~~~-----~~~-------------~~~~~~~~~i~--~P~lii~g~~D~~vp~~~~~~~~~~~--~~-----~~~~~ 253 (278)
T TIGR03056 201 LSMMAQ-----WDL-------------APLNRDLPRIT--IPLHLIAGEEDKAVPPDESKRAATRV--PT-----ATLHV 253 (278)
T ss_pred HHHhhc-----ccc-------------cchhhhcccCC--CCEEEEEeCCCcccCHHHHHHHHHhc--cC-----CeEEE
Confidence 000000 000 00011456776 99999999999999988 8888888 77 78899
Q ss_pred cCCC-ccccccCchhHHHHHHHHHh
Q 035617 392 VMSK-SLSFQVSPQLKMIAVMALFQ 415 (422)
Q Consensus 392 i~~~-H~~~~~~~~~v~~~i~~fl~ 415 (422)
++++ |+.+.+.|+++.+.|.+|++
T Consensus 254 ~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 254 VPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999 99999999999999999985
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.91 E-value=2.6e-23 Score=193.60 Aligned_cols=123 Identities=24% Similarity=0.302 Sum_probs=88.3
Q ss_pred CCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCC
Q 035617 76 TKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDP 155 (422)
Q Consensus 76 t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~ 155 (422)
+.||..+.+...... ..+++||++||+.+++..|. ..+...+.+.||+|+++|+||||.|........
T Consensus 8 ~~~~~~~~~~~~~~~-------~~~~~vl~~hG~~g~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 75 (288)
T TIGR01250 8 TVDGGYHLFTKTGGE-------GEKIKLLLLHGGPGMSHEYL-----ENLRELLKEEGREVIMYDQLGCGYSDQPDDSDE 75 (288)
T ss_pred cCCCCeEEEEeccCC-------CCCCeEEEEcCCCCccHHHH-----HHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc
Confidence 345555554443322 23689999999877766552 445566766699999999999999975322110
Q ss_pred CcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 156 SQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 156 ~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
.+++++++ +|+.++++ ..+ ++++++||||||.+++.++...| ++|+++++++++.
T Consensus 76 ------~~~~~~~~-~~~~~~~~----~~~~~~~~liG~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 131 (288)
T TIGR01250 76 ------LWTIDYFV-DELEEVRE----KLGLDKFYLLGHSWGGMLAQEYALKYG--QHLKGLIISSMLD 131 (288)
T ss_pred ------cccHHHHH-HHHHHHHH----HcCCCcEEEEEeehHHHHHHHHHHhCc--cccceeeEecccc
Confidence 25677766 66666544 447 88999999999999999998766 7899999998764
No 35
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.91 E-value=1.2e-22 Score=195.50 Aligned_cols=124 Identities=21% Similarity=0.269 Sum_probs=96.5
Q ss_pred EECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCC
Q 035617 74 VTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSL 153 (422)
Q Consensus 74 v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~ 153 (422)
..+.+|+.+++....++ .+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|++....
T Consensus 109 ~~~~~~~~~~y~~~G~~--------~~~~ivllHG~~~~~~~w------~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~ 173 (383)
T PLN03084 109 QASSDLFRWFCVESGSN--------NNPPVLLIHGFPSQAYSY------RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPG 173 (383)
T ss_pred EEcCCceEEEEEecCCC--------CCCeEEEECCCCCCHHHH------HHHHHHHhc-CCEEEEECCCCCCCCCCCccc
Confidence 34567766665543322 368999999999999998 456667875 899999999999999864321
Q ss_pred CCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 154 DPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
. . -+|++++++ +|+.++++.+ + ++++|+|||+||++++.++.++| ++|+++|+++|...
T Consensus 174 ~---~--~~ys~~~~a-~~l~~~i~~l----~~~~~~LvG~s~GG~ia~~~a~~~P--~~v~~lILi~~~~~ 233 (383)
T PLN03084 174 Y---G--FNYTLDEYV-SSLESLIDEL----KSDKVSLVVQGYFSPPVVKYASAHP--DKIKKLILLNPPLT 233 (383)
T ss_pred c---c--ccCCHHHHH-HHHHHHHHHh----CCCCceEEEECHHHHHHHHHHHhCh--HhhcEEEEECCCCc
Confidence 0 0 157888877 7777777666 7 89999999999999999998766 89999999998743
No 36
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.91 E-value=3.8e-23 Score=190.28 Aligned_cols=235 Identities=17% Similarity=0.201 Sum_probs=136.2
Q ss_pred CcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHH
Q 035617 101 PPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHV 180 (422)
Q Consensus 101 ~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i 180 (422)
|+|||+||+++++..| ..++..|.+ .|+|+++|+||||.|.... .+++.+++ +| +
T Consensus 14 ~~ivllHG~~~~~~~w------~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~----------~~~~~~~~-~~-------l 68 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW------RCIDEELSS-HFTLHLVDLPGFGRSRGFG----------ALSLADMA-EA-------V 68 (256)
T ss_pred CeEEEECCCCCChhHH------HHHHHHHhc-CCEEEEecCCCCCCCCCCC----------CCCHHHHH-HH-------H
Confidence 5799999999999999 456677866 6999999999999997421 34555444 22 2
Q ss_pred HHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChh
Q 035617 181 YEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKP 259 (422)
Q Consensus 181 ~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~ 259 (422)
.+ .. ++++++||||||.+++.+|.++| ++|+++|+++|........... ..... ....+...+. ..+ ...
T Consensus 69 ~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lili~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-~~~---~~~ 139 (256)
T PRK10349 69 LQ-QAPDKAIWLGWSLGGLVASQIALTHP--ERVQALVTVASSPCFSARDEWP-GIKPD-VLAGFQQQLS-DDF---QRT 139 (256)
T ss_pred Hh-cCCCCeEEEEECHHHHHHHHHHHhCh--HhhheEEEecCccceecCCCCC-cccHH-HHHHHHHHHH-hch---HHH
Confidence 22 24 89999999999999999988666 8999999998753321110000 00000 0000000000 000 000
Q ss_pred HHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhh---hcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccc
Q 035617 260 VADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFL---RNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMH 336 (422)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (422)
.+.++.... .+.. .... ....+. ...+.. ....+......... ++..
T Consensus 140 ~~~~~~~~~--------------~~~~-~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~-------- 189 (256)
T PRK10349 140 VERFLALQT--------------MGTE-TARQ-DARALKKTVLALPMP-EVDVLNGGLEILKT-----VDLR-------- 189 (256)
T ss_pred HHHHHHHHH--------------ccCc-hHHH-HHHHHHHHhhccCCC-cHHHHHHHHHHHHh-----CccH--------
Confidence 011100000 0000 0000 000000 000000 00111000011110 1111
Q ss_pred cCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHH
Q 035617 337 YGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMAL 413 (422)
Q Consensus 337 y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~f 413 (422)
-.+.+++ +|||+++|++|.++|.+ +.+.+.+ ++ .+++++|++ |+.++|+|++|++.+.+|
T Consensus 190 --------~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~i--~~-----~~~~~i~~~gH~~~~e~p~~f~~~l~~~ 252 (256)
T PRK10349 190 --------QPLQNVS--MPFLRLYGYLDGLVPRKVVPMLDKLW--PH-----SESYIFAKAAHAPFISHPAEFCHLLVAL 252 (256)
T ss_pred --------HHHhhcC--CCeEEEecCCCccCCHHHHHHHHHhC--CC-----CeEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 1456776 99999999999999988 7777888 77 889999999 999999999999999998
Q ss_pred Hhh
Q 035617 414 FQR 416 (422)
Q Consensus 414 l~~ 416 (422)
-++
T Consensus 253 ~~~ 255 (256)
T PRK10349 253 KQR 255 (256)
T ss_pred hcc
Confidence 654
No 37
>PRK07581 hypothetical protein; Validated
Probab=99.91 E-value=4.1e-23 Score=198.03 Aligned_cols=280 Identities=12% Similarity=-0.022 Sum_probs=144.4
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChH-----HHHhchHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWD-----ELVAYDLP 174 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~-----~~~~~D~~ 174 (422)
.|+||++||++++...|..... ....|..++|+|+++|+||||.|.......+ .|++. .++ +|+.
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~---~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~------~~~~~~~~~~~~~-~~~~ 110 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIG---PGRALDPEKYFIIIPNMFGNGLSSSPSNTPA------PFNAARFPHVTIY-DNVR 110 (339)
T ss_pred CCEEEEeCCCCCCcccchhhcc---CCCccCcCceEEEEecCCCCCCCCCCCCCCC------CCCCCCCCceeHH-HHHH
Confidence 4677777888777666632210 0012655689999999999999975332101 22322 223 5666
Q ss_pred HHHHHHHHHhC-Ce-EEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhc---
Q 035617 175 AVFDHVYEQTG-QK-IHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLG--- 249 (422)
Q Consensus 175 ~~i~~i~~~~~-~~-i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g--- 249 (422)
+....+.+..+ ++ .+|+||||||++|+.+|.++| ++|+++|++++............. .....+.....
T Consensus 111 ~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P--~~V~~Lvli~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~ 184 (339)
T PRK07581 111 AQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYP--DMVERAAPIAGTAKTTPHNFVFLE----GLKAALTADPAFNG 184 (339)
T ss_pred HHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCH--HHHhhheeeecCCCCCHHHHHHHH----HHHHHHHhCCCCCC
Confidence 65555666668 88 579999999999999999877 899999999865432111100000 00000000000
Q ss_pred -CccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCC-CC-C-chhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeee
Q 035617 250 -LAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNC-CL-N-SSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKF 325 (422)
Q Consensus 250 -~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~-~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 325 (422)
.....|.. ............ .....++... .... .. + ...+..+........+...+...........+ .
T Consensus 185 ~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 258 (339)
T PRK07581 185 GWYAEPPER-GLRAHARVYAGW--GFSQAFYRQE-LWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDI--S 258 (339)
T ss_pred CCCCCcHHH-HHHHHHHHHHHH--HhHHHHHHhh-hccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhccc--c
Confidence 00000100 000000000000 0000000000 0000 00 0 01111111100000000011111110100000 0
Q ss_pred cCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCC-C-cccccc
Q 035617 326 NYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMS-K-SLSFQV 401 (422)
Q Consensus 326 ~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~-~-H~~~~~ 401 (422)
.... + .....-.+.+|+ +|||+|+|++|.++|++ +.+.+.+ ++ .+++++++ + |+.+++
T Consensus 259 ~~~~-------~--~~d~~~~L~~I~--~PtLvI~G~~D~~~p~~~~~~l~~~i--p~-----a~l~~i~~~~GH~~~~~ 320 (339)
T PRK07581 259 RNPA-------Y--GGDLAAALGSIT--AKTFVMPISTDLYFPPEDCEAEAALI--PN-----AELRPIESIWGHLAGFG 320 (339)
T ss_pred cCcc-------c--CCCHHHHHhcCC--CCEEEEEeCCCCCCCHHHHHHHHHhC--CC-----CeEEEeCCCCCcccccc
Confidence 0000 0 000011466787 99999999999999988 8888888 87 78899998 8 999999
Q ss_pred CchhHHHHHHHHHhhhcC
Q 035617 402 SPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 402 ~~~~v~~~i~~fl~~~~~ 419 (422)
+++++...|.+||++.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 321 QNPADIAFIDAALKELLA 338 (339)
T ss_pred CcHHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 38
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.91 E-value=6.3e-23 Score=186.13 Aligned_cols=236 Identities=16% Similarity=0.195 Sum_probs=135.8
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|.... .+++.+ +++.
T Consensus 4 ~~~iv~~HG~~~~~~~~------~~~~~~l~~-~~~vi~~d~~G~G~s~~~~----------~~~~~~--------~~~~ 58 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVF------RCLDEELSA-HFTLHLVDLPGHGRSRGFG----------PLSLAD--------AAEA 58 (245)
T ss_pred CceEEEEcCCCCchhhH------HHHHHhhcc-CeEEEEecCCcCccCCCCC----------CcCHHH--------HHHH
Confidence 48999999999999998 556667865 7999999999999986421 233433 3333
Q ss_pred HHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChh
Q 035617 180 VYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKP 259 (422)
Q Consensus 180 i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~ 259 (422)
+.+...++++++||||||.+++.++.++| ++|+++|++++................. ....+...+ ...+ ...
T Consensus 59 ~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~il~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~---~~~ 131 (245)
T TIGR01738 59 IAAQAPDPAIWLGWSLGGLVALHIAATHP--DRVRALVTVASSPCFSAREDWPEGIKPD-VLTGFQQQL-SDDY---QRT 131 (245)
T ss_pred HHHhCCCCeEEEEEcHHHHHHHHHHHHCH--HhhheeeEecCCcccccCCcccccCCHH-HHHHHHHHh-hhhH---HHH
Confidence 43333379999999999999999998766 7899999998754321100000000000 000000000 0000 000
Q ss_pred HHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhh---cCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccc
Q 035617 260 VADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLR---NEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMH 336 (422)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (422)
....... ...+.. ........+.. .... ...+.+......... .+
T Consensus 132 ~~~~~~~--------------~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~---------- 179 (245)
T TIGR01738 132 IERFLAL--------------QTLGTP--TARQDARALKQTLLARPT-PNVQVLQAGLEILAT-----VD---------- 179 (245)
T ss_pred HHHHHHH--------------HHhcCC--ccchHHHHHHHHhhccCC-CCHHHHHHHHHHhhc-----cc----------
Confidence 0000000 000000 00000000000 0000 001111111111110 00
Q ss_pred cCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHH
Q 035617 337 YGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMAL 413 (422)
Q Consensus 337 y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~f 413 (422)
....+.+|+ +|+++++|++|.++|++ +.+.+.+ ++ ++++.++++ |+.++++|+++++.|.+|
T Consensus 180 ------~~~~l~~i~--~Pvlii~g~~D~~~~~~~~~~~~~~~--~~-----~~~~~~~~~gH~~~~e~p~~~~~~i~~f 244 (245)
T TIGR01738 180 ------LRQPLQNIS--VPFLRLYGYLDGLVPAKVVPYLDKLA--PH-----SELYIFAKAAHAPFLSHAEAFCALLVAF 244 (245)
T ss_pred ------HHHHHhcCC--CCEEEEeecCCcccCHHHHHHHHHhC--CC-----CeEEEeCCCCCCccccCHHHHHHHHHhh
Confidence 011456777 99999999999999998 7788888 77 889999999 999999999999999998
Q ss_pred H
Q 035617 414 F 414 (422)
Q Consensus 414 l 414 (422)
+
T Consensus 245 i 245 (245)
T TIGR01738 245 K 245 (245)
T ss_pred C
Confidence 5
No 39
>PRK10985 putative hydrolase; Provisional
Probab=99.90 E-value=9e-23 Score=194.07 Aligned_cols=139 Identities=16% Similarity=0.114 Sum_probs=101.6
Q ss_pred eeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcc-cccCCCCCCHHHHHHhCCCeEEEeCCCCCCC
Q 035617 68 KCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLT-WLLNPPEQNLPLILADHGFDVWIANTRGTRF 146 (422)
Q Consensus 68 ~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~ 146 (422)
+.+...++++||..+.+.+...+. ...++|+||++||++++... | ...++..|.++||+|+++|+||||.
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~----~~~~~p~vll~HG~~g~~~~~~-----~~~~~~~l~~~G~~v~~~d~rG~g~ 100 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPA----QARHKPRLVLFHGLEGSFNSPY-----AHGLLEAAQKRGWLGVVMHFRGCSG 100 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCc----cCCCCCEEEEeCCCCCCCcCHH-----HHHHHHHHHHCCCEEEEEeCCCCCC
Confidence 345567899999888776654332 22357999999999887554 3 2567888999999999999999997
Q ss_pred CCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 147 SRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 147 S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
+..... . .+.... .+|+..+++++.++.+ .+++++||||||.++..++++++....++++++++++...
T Consensus 101 ~~~~~~-----~---~~~~~~--~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 101 EPNRLH-----R---IYHSGE--TEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred CccCCc-----c---eECCCc--hHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH
Confidence 643111 0 111111 3788899999988878 8999999999999988887764311248899999887543
No 40
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=8.2e-22 Score=192.21 Aligned_cols=108 Identities=17% Similarity=0.146 Sum_probs=77.8
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHH-HHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLP-AVF 177 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~i 177 (422)
++|+|||+||++++...|. ..+..|++ +|+|+++|+||||.|.+... .++..+...+++. .+.
T Consensus 104 ~~p~vvllHG~~~~~~~~~------~~~~~L~~-~~~vi~~D~rG~G~S~~~~~---------~~~~~~~~~~~~~~~i~ 167 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFF------RNFDALAS-RFRVIAIDQLGWGGSSRPDF---------TCKSTEETEAWFIDSFE 167 (402)
T ss_pred CCCEEEEECCCCcchhHHH------HHHHHHHh-CCEEEEECCCCCCCCCCCCc---------ccccHHHHHHHHHHHHH
Confidence 5799999999999888873 34456766 69999999999999975321 1111111111222 223
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
+++ +..+ ++++++||||||.+++.++.+++ ++|+++|+++|....
T Consensus 168 ~~~-~~l~~~~~~lvGhS~GG~la~~~a~~~p--~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 168 EWR-KAKNLSNFILLGHSFGGYVAAKYALKHP--EHVQHLILVGPAGFS 213 (402)
T ss_pred HHH-HHcCCCCeEEEEECHHHHHHHHHHHhCc--hhhcEEEEECCcccc
Confidence 333 4446 89999999999999999999776 899999999987644
No 41
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.90 E-value=1.3e-22 Score=184.35 Aligned_cols=105 Identities=24% Similarity=0.377 Sum_probs=81.9
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+|+||++||++++...| ..++..|+ +||+|+++|+||||.|....... .+++++++ .| +++.
T Consensus 1 ~~~vv~~hG~~~~~~~~------~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~-------~~~~~~~~-~~---~~~~ 62 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW------QALIELLG-PHFRCLAIDLPGHGSSQSPDEIE-------RYDFEEAA-QD---ILAT 62 (251)
T ss_pred CCEEEEEcCCCCchhhH------HHHHHHhc-ccCeEEEEcCCCCCCCCCCCccC-------hhhHHHHH-HH---HHHH
Confidence 47899999999999998 56777787 69999999999999997532111 44566655 33 2344
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
+.+..+ ++++++|||+||.+++.++.+.+ +.|++++++++...
T Consensus 63 ~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~--~~v~~lil~~~~~~ 106 (251)
T TIGR03695 63 LLDQLGIEPFFLVGYSMGGRIALYYALQYP--ERVQGLILESGSPG 106 (251)
T ss_pred HHHHcCCCeEEEEEeccHHHHHHHHHHhCc--hheeeeEEecCCCC
Confidence 545557 89999999999999999999776 78999999998643
No 42
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=7e-22 Score=192.76 Aligned_cols=140 Identities=15% Similarity=0.094 Sum_probs=103.7
Q ss_pred hhhhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCC-cccccCCCCCCHHHHHHhCCCeE
Q 035617 58 CASSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDG-LTWLLNPPEQNLPLILADHGFDV 136 (422)
Q Consensus 58 ~~~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~-~~~~~~~~~~~l~~~l~~~g~~v 136 (422)
+.+.....+++.|++.+++.||..+.++...+.. .++.|+||++||+.+.. ..| ..++..|+++||+|
T Consensus 157 f~~a~~~~~~~~e~v~i~~~~g~~l~g~l~~P~~-----~~~~P~Vli~gG~~~~~~~~~------~~~~~~La~~Gy~v 225 (414)
T PRK05077 157 YEEAAKRLPGELKELEFPIPGGGPITGFLHLPKG-----DGPFPTVLVCGGLDSLQTDYY------RLFRDYLAPRGIAM 225 (414)
T ss_pred HHHHHhhcCCceEEEEEEcCCCcEEEEEEEECCC-----CCCccEEEEeCCcccchhhhH------HHHHHHHHhCCCEE
Confidence 3445555678899999999999788877654432 14568888877776654 344 44677899999999
Q ss_pred EEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHh--C-CeEEEEEeChhHHHHHHHHhccchhhhH
Q 035617 137 WIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQT--G-QKIHYVGHSLGTLIALASFSEGLQVDKL 213 (422)
Q Consensus 137 ~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~--~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v 213 (422)
+++|+||+|.|.+... . .... ....++++++.... + ++|.++||||||.+++.+|..++ ++|
T Consensus 226 l~~D~pG~G~s~~~~~-~--------~d~~----~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p--~ri 290 (414)
T PRK05077 226 LTIDMPSVGFSSKWKL-T--------QDSS----LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP--PRL 290 (414)
T ss_pred EEECCCCCCCCCCCCc-c--------ccHH----HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC--cCc
Confidence 9999999999965321 0 0111 22247888887664 4 89999999999999999988665 689
Q ss_pred hheeeecchh
Q 035617 214 KSAALLSPIA 223 (422)
Q Consensus 214 ~~~v~~~p~~ 223 (422)
+++|+++|+.
T Consensus 291 ~a~V~~~~~~ 300 (414)
T PRK05077 291 KAVACLGPVV 300 (414)
T ss_pred eEEEEECCcc
Confidence 9999999875
No 43
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.89 E-value=4.4e-22 Score=181.49 Aligned_cols=100 Identities=21% Similarity=0.214 Sum_probs=79.7
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+|+|||+||+++++..| ..++..| + +|+|+++|+||||.|.... ..++.+++ +|+.++++.
T Consensus 2 ~p~vvllHG~~~~~~~w------~~~~~~l-~-~~~vi~~D~~G~G~S~~~~----------~~~~~~~~-~~l~~~l~~ 62 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW------QPVGEAL-P-DYPRLYIDLPGHGGSAAIS----------VDGFADVS-RLLSQTLQS 62 (242)
T ss_pred CCEEEEECCCCCChHHH------HHHHHHc-C-CCCEEEecCCCCCCCCCcc----------ccCHHHHH-HHHHHHHHH
Confidence 57899999999999998 4555667 3 6999999999999997532 22666666 667666655
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
+ + ++++++||||||.+++.++.+++ +.+|++++++++..
T Consensus 63 ~----~~~~~~lvG~S~Gg~va~~~a~~~~-~~~v~~lvl~~~~~ 102 (242)
T PRK11126 63 Y----NILPYWLVGYSLGGRIAMYYACQGL-AGGLCGLIVEGGNP 102 (242)
T ss_pred c----CCCCeEEEEECHHHHHHHHHHHhCC-cccccEEEEeCCCC
Confidence 4 7 99999999999999999999764 13599999998764
No 44
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.89 E-value=1.7e-22 Score=180.82 Aligned_cols=103 Identities=31% Similarity=0.457 Sum_probs=83.6
Q ss_pred EEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHH
Q 035617 103 VLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYE 182 (422)
Q Consensus 103 vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~ 182 (422)
|||+||++++...| ..++..|+ +||+|+++|+||||.|..... +..+++++.+ .|+.++++.+
T Consensus 1 vv~~hG~~~~~~~~------~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-------~~~~~~~~~~-~~l~~~l~~~-- 63 (228)
T PF12697_consen 1 VVFLHGFGGSSESW------DPLAEALA-RGYRVIAFDLPGHGRSDPPPD-------YSPYSIEDYA-EDLAELLDAL-- 63 (228)
T ss_dssp EEEE-STTTTGGGG------HHHHHHHH-TTSEEEEEECTTSTTSSSHSS-------GSGGSHHHHH-HHHHHHHHHT--
T ss_pred eEEECCCCCCHHHH------HHHHHHHh-CCCEEEEEecCCccccccccc-------cCCcchhhhh-hhhhhccccc--
Confidence 79999999999988 55888885 699999999999999986432 1256777766 6666655554
Q ss_pred HhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 183 QTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 183 ~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
+ ++++++|||+||.+++.++.++| ++|+++|+++|.....
T Consensus 64 --~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 64 --GIKKVILVGHSMGGMIALRLAARYP--DRVKGLVLLSPPPPLP 104 (228)
T ss_dssp --TTSSEEEEEETHHHHHHHHHHHHSG--GGEEEEEEESESSSHH
T ss_pred --ccccccccccccccccccccccccc--cccccceeeccccccc
Confidence 7 89999999999999999999766 7999999999987543
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.89 E-value=1.1e-21 Score=190.44 Aligned_cols=240 Identities=17% Similarity=0.200 Sum_probs=138.5
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
++++|||+||++++...| ..++..|.+ +|+|+++|+||||.|..... ..++.+++ .|+..++
T Consensus 130 ~~~~vl~~HG~~~~~~~~------~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~---------~~~~~~~~-~~~~~~~- 191 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNW------LFNHAALAA-GRPVIALDLPGHGASSKAVG---------AGSLDELA-AAVLAFL- 191 (371)
T ss_pred CCCeEEEECCCCCccchH------HHHHHHHhc-CCEEEEEcCCCCCCCCCCCC---------CCCHHHHH-HHHHHHH-
Confidence 368999999999999998 445566765 69999999999999964322 33566655 4444433
Q ss_pred HHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCC
Q 035617 179 HVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKG 257 (422)
Q Consensus 179 ~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~ 257 (422)
+..+ .+++++||||||.+++.+|..++ ++++++++++|..........+........ ..
T Consensus 192 ---~~~~~~~~~lvG~S~Gg~~a~~~a~~~~--~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~---------------~~ 251 (371)
T PRK14875 192 ---DALGIERAHLVGHSMGGAVALRLAARAP--QRVASLTLIAPAGLGPEINGDYIDGFVAAE---------------SR 251 (371)
T ss_pred ---HhcCCccEEEEeechHHHHHHHHHHhCc--hheeEEEEECcCCcCcccchhHHHHhhccc---------------ch
Confidence 4457 89999999999999999988765 789999999987533221111110000000 00
Q ss_pred hhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCcccccc
Q 035617 258 KPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHY 337 (422)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 337 (422)
......+........ ......................+..+......+....++
T Consensus 252 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 305 (371)
T PRK14875 252 RELKPVLELLFADPA---------------LVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVD----------- 305 (371)
T ss_pred hHHHHHHHHHhcChh---------------hCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchh-----------
Confidence 000011111110000 001111111111000000000011110100000000011
Q ss_pred CCCCCccccCCCCCCCccEEEEEeCCCccCChhHHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhh
Q 035617 338 GEFRPPIYNISNIPHDLPLFVSYGGNDALADLTQYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQR 416 (422)
Q Consensus 338 ~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~ 416 (422)
....+.+++ +|+|+++|++|.++|++ ..+.+ .. ..+++.++++ |+.+++.|+++.+.|.+||++
T Consensus 306 -----~~~~l~~i~--~Pvlii~g~~D~~vp~~--~~~~l--~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 306 -----LRDRLASLA--IPVLVIWGEQDRIIPAA--HAQGL--PD----GVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred -----HHHHHhcCC--CCEEEEEECCCCccCHH--HHhhc--cC----CCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 111355666 99999999999999876 22334 32 3778899999 999999999999999999976
Q ss_pred h
Q 035617 417 Q 417 (422)
Q Consensus 417 ~ 417 (422)
+
T Consensus 371 ~ 371 (371)
T PRK14875 371 A 371 (371)
T ss_pred C
Confidence 3
No 46
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.88 E-value=1.4e-21 Score=181.19 Aligned_cols=104 Identities=17% Similarity=0.302 Sum_probs=81.2
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
.+|+|||+||++.+...| ..++..|.++||+|+++|+||||.|..... . .+++++++ +|+.+.++
T Consensus 17 ~~p~vvliHG~~~~~~~w------~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~--~------~~~~~~~~-~~l~~~i~ 81 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCW------YKIRCLMENSGYKVTCIDLKSAGIDQSDAD--S------VTTFDEYN-KPLIDFLS 81 (273)
T ss_pred CCCeEEEECCCCCCcCcH------HHHHHHHHhCCCEEEEecccCCCCCCCCcc--c------CCCHHHHH-HHHHHHHH
Confidence 478999999999999888 567777988899999999999998754221 0 24666666 44444433
Q ss_pred HHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 179 HVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 179 ~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
. ..+ ++++|+||||||.++..++.+++ ++|+++|++++.
T Consensus 82 ~---l~~~~~v~lvGhS~GG~v~~~~a~~~p--~~v~~lv~~~~~ 121 (273)
T PLN02211 82 S---LPENEKVILVGHSAGGLSVTQAIHRFP--KKICLAVYVAAT 121 (273)
T ss_pred h---cCCCCCEEEEEECchHHHHHHHHHhCh--hheeEEEEeccc
Confidence 3 223 79999999999999999988665 799999999874
No 47
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.88 E-value=2.5e-21 Score=186.42 Aligned_cols=132 Identities=17% Similarity=0.179 Sum_probs=89.0
Q ss_pred CCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcc-----------cccCCCCCCHHHHHHhCCCeEEEeCCCC--C
Q 035617 78 DGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLT-----------WLLNPPEQNLPLILADHGFDVWIANTRG--T 144 (422)
Q Consensus 78 dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-----------~~~~~~~~~l~~~l~~~g~~v~~~d~rG--~ 144 (422)
+|..+++..+...+ ...+++|||+||++++... |.... ..+..|..++|+|+++|+|| |
T Consensus 14 ~~~~~~y~~~g~~~-----~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~---~~~~~l~~~~~~vi~~D~~G~~~ 85 (351)
T TIGR01392 14 SDVRVAYETYGTLN-----AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLI---GPGRAIDTDRYFVVCSNVLGGCY 85 (351)
T ss_pred CCceEEEEeccccC-----CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhcc---CCCCCcCCCceEEEEecCCCCCC
Confidence 45566666554321 1235799999999997642 43221 00123545789999999999 4
Q ss_pred CCCCCCCCCCCC----cccccccChHHHHhchHHHHHHHHHHHhC-Ce-EEEEEeChhHHHHHHHHhccchhhhHhheee
Q 035617 145 RFSRRHTSLDPS----QMEFWNWSWDELVAYDLPAVFDHVYEQTG-QK-IHYVGHSLGTLIALASFSEGLQVDKLKSAAL 218 (422)
Q Consensus 145 G~S~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~-i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~ 218 (422)
|.|.. ....+. ...+..|++++++ +|+.++++.+ + ++ ++++||||||++++.++.++| ++|+++|+
T Consensus 86 g~s~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l----~~~~~~~l~G~S~Gg~ia~~~a~~~p--~~v~~lvl 157 (351)
T TIGR01392 86 GSTGP-SSINPGGRPYGSDFPLITIRDDV-KAQKLLLDHL----GIEQIAAVVGGSMGGMQALEWAIDYP--ERVRAIVV 157 (351)
T ss_pred CCCCC-CCCCCCCCcCCCCCCCCcHHHHH-HHHHHHHHHc----CCCCceEEEEECHHHHHHHHHHHHCh--HhhheEEE
Confidence 54432 111111 1123467888877 6777765554 8 77 999999999999999999776 89999999
Q ss_pred ecchhhc
Q 035617 219 LSPIAYL 225 (422)
Q Consensus 219 ~~p~~~~ 225 (422)
+++....
T Consensus 158 ~~~~~~~ 164 (351)
T TIGR01392 158 LATSARH 164 (351)
T ss_pred EccCCcC
Confidence 9987543
No 48
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.88 E-value=3.9e-21 Score=181.55 Aligned_cols=124 Identities=19% Similarity=0.171 Sum_probs=88.9
Q ss_pred EEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCC
Q 035617 71 EIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRH 150 (422)
Q Consensus 71 ~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~ 150 (422)
+..+...||..+++...... ++++|||+||+.++...+ .+...+...+|+|+++|+||||.|...
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~--------~~~~lvllHG~~~~~~~~-------~~~~~~~~~~~~vi~~D~~G~G~S~~~ 70 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNP--------DGKPVVFLHGGPGSGTDP-------GCRRFFDPETYRIVLFDQRGCGKSTPH 70 (306)
T ss_pred CCeEEcCCCcEEEEEECcCC--------CCCEEEEECCCCCCCCCH-------HHHhccCccCCEEEEECCCCCCCCCCC
Confidence 34677788888877654322 257899999987775543 122234456899999999999999753
Q ss_pred CCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 151 TSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
... ..++..+++ .|+..++ +..+ ++++++||||||.+++.++.++| ++|+++|++++..
T Consensus 71 ~~~-------~~~~~~~~~-~dl~~l~----~~l~~~~~~lvG~S~GG~ia~~~a~~~p--~~v~~lvl~~~~~ 130 (306)
T TIGR01249 71 ACL-------EENTTWDLV-ADIEKLR----EKLGIKNWLVFGGSWGSTLALAYAQTHP--EVVTGLVLRGIFL 130 (306)
T ss_pred CCc-------ccCCHHHHH-HHHHHHH----HHcCCCCEEEEEECHHHHHHHHHHHHCh--Hhhhhheeecccc
Confidence 211 134555554 5555544 4447 88999999999999999999776 7899999998754
No 49
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=6.7e-21 Score=182.79 Aligned_cols=117 Identities=17% Similarity=0.174 Sum_probs=80.2
Q ss_pred CCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCc------------ccccCCCCCCHHHHHHhCCCeEEEeCCCCCC
Q 035617 78 DGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGL------------TWLLNPPEQNLPLILADHGFDVWIANTRGTR 145 (422)
Q Consensus 78 dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~------------~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G 145 (422)
+|..+++.....+ ++++||+||+.++.. .|..+... .+.|...+|+|+++|+||||
T Consensus 44 ~~~~l~y~~~G~~---------~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~---~~~L~~~~~~Vi~~Dl~G~g 111 (343)
T PRK08775 44 EDLRLRYELIGPA---------GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGS---GRALDPARFRLLAFDFIGAD 111 (343)
T ss_pred CCceEEEEEeccC---------CCCEEEEecCCCcccccccccCCCCCCcchhccCC---CCccCccccEEEEEeCCCCC
Confidence 6666665544321 335666666555554 45433320 01253347999999999999
Q ss_pred CCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-Ce-EEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 146 FSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QK-IHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 146 ~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~-i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
.|.. . .++..+++ +|+.++++.+ + ++ ++++||||||++++.+|.++| ++|+++|++++..
T Consensus 112 ~s~~--~---------~~~~~~~a-~dl~~ll~~l----~l~~~~~lvG~SmGG~vA~~~A~~~P--~~V~~LvLi~s~~ 173 (343)
T PRK08775 112 GSLD--V---------PIDTADQA-DAIALLLDAL----GIARLHAFVGYSYGALVGLQFASRHP--ARVRTLVVVSGAH 173 (343)
T ss_pred CCCC--C---------CCCHHHHH-HHHHHHHHHc----CCCcceEEEEECHHHHHHHHHHHHCh--HhhheEEEECccc
Confidence 7732 1 45667765 7777766665 7 56 579999999999999999776 8999999999864
Q ss_pred h
Q 035617 224 Y 224 (422)
Q Consensus 224 ~ 224 (422)
.
T Consensus 174 ~ 174 (343)
T PRK08775 174 R 174 (343)
T ss_pred c
Confidence 3
No 50
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.87 E-value=1.5e-20 Score=182.50 Aligned_cols=120 Identities=23% Similarity=0.257 Sum_probs=83.1
Q ss_pred CCCcEEEecCCCCCCcccccCCC-------CCCHH---HHHHhCCCeEEEeCCCCC-CCCCCCCCCCCC-----cccccc
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPP-------EQNLP---LILADHGFDVWIANTRGT-RFSRRHTSLDPS-----QMEFWN 162 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~-------~~~l~---~~l~~~g~~v~~~d~rG~-G~S~~~~~~~~~-----~~~~~~ 162 (422)
.+|+|||+||++++...|..+.. ...++ ..|..++|+|+++|++|+ |.|.+.....+. ...|-.
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 36899999999999986432100 01111 113245899999999984 656543322221 112226
Q ss_pred cChHHHHhchHHHHHHHHHHHhC-Ce-EEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 163 WSWDELVAYDLPAVFDHVYEQTG-QK-IHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 163 ~~~~~~~~~D~~~~i~~i~~~~~-~~-i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
|++++++ .|+.++++.+ + ++ ++++||||||.+++.++.++| ++|+++|++++....
T Consensus 127 ~~~~~~~-~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 127 ITIRDWV-RAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYP--DRVRSALVIASSARL 184 (379)
T ss_pred CCHHHHH-HHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhCh--HhhhEEEEECCCccc
Confidence 7888888 7777766665 8 77 599999999999999999776 899999999986543
No 51
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.87 E-value=5.1e-21 Score=189.43 Aligned_cols=266 Identities=17% Similarity=0.215 Sum_probs=159.1
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..++|||++||+......|.+. +..+++++|.++||+|+++|+||+|.|.. ++++++++.+++.+++
T Consensus 186 ~~~~PlLiVp~~i~k~yilDL~-p~~Slv~~L~~qGf~V~~iDwrgpg~s~~------------~~~~ddY~~~~i~~al 252 (532)
T TIGR01838 186 VHKTPLLIVPPWINKYYILDLR-PQNSLVRWLVEQGHTVFVISWRNPDASQA------------DKTFDDYIRDGVIAAL 252 (532)
T ss_pred CCCCcEEEECcccccceeeecc-cchHHHHHHHHCCcEEEEEECCCCCcccc------------cCChhhhHHHHHHHHH
Confidence 3579999999998777776553 45799999999999999999999998865 4456677777899999
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHH----HHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCcc
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALA----SFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAE 252 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~----~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 252 (422)
+.+++.++ ++++++||||||.++.. +++.+ .+++|++++++++....... ..+..+.....+..+........
T Consensus 253 ~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~-~~~rv~slvll~t~~Df~~~-G~l~~f~~~~~~~~~e~~~~~~G 330 (532)
T TIGR01838 253 EVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARG-DDKRIKSATFFTTLLDFSDP-GELGVFVDEEIVAGIERQNGGGG 330 (532)
T ss_pred HHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhC-CCCccceEEEEecCcCCCCc-chhhhhcCchhHHHHHHHHHhcC
Confidence 99999889 99999999999998632 33433 12589999999987665432 22222221111111222222222
Q ss_pred ccCCChhHHHHHHHhccCCccchhhhhh-hhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHH-HHHhcCCeeeecCCCC
Q 035617 253 FNPKGKPVADFLKSLCTNPVVNCYDLLT-SLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLA-QTVRDGVIAKFNYGRP 330 (422)
Q Consensus 253 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~ 330 (422)
.+|.. .+...+ .+.+....++...+. .+.|.... ...+..|...... .+-+....++ .....+.+.. +
T Consensus 331 ~lpg~-~m~~~F-~~lrp~~l~w~~~v~~yl~g~~~~--~fdll~Wn~D~t~-lP~~~~~~~lr~ly~~N~L~~---G-- 400 (532)
T TIGR01838 331 YLDGR-QMAVTF-SLLRENDLIWNYYVDNYLKGKSPV--PFDLLFWNSDSTN-LPGKMHNFYLRNLYLQNALTT---G-- 400 (532)
T ss_pred CCCHH-HHHHHH-HhcChhhHHHHHHHHHHhcCCCcc--chhHHHHhccCcc-chHHHHHHHHHHHHhcCCCcC---C--
Confidence 33332 111222 222222333333322 33333211 1122222222211 1222233332 2223222210 0
Q ss_pred CccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCc
Q 035617 331 DYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSP 403 (422)
Q Consensus 331 ~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~ 403 (422)
.+..-+ -..++.+|+ +|+++++|++|.++|++ +.+.+.+ ++ .+.++++++ |+.++++|
T Consensus 401 --~~~v~g----~~~dL~~I~--vPvLvV~G~~D~IvP~~sa~~l~~~i--~~-----~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 401 --GLEVCG----VRLDLSKVK--VPVYIIATREDHIAPWQSAYRGAALL--GG-----PKTFVLGESGHIAGVVNP 461 (532)
T ss_pred --eeEECC----EecchhhCC--CCEEEEeeCCCCcCCHHHHHHHHHHC--CC-----CEEEEECCCCCchHhhCC
Confidence 000000 012788888 99999999999999998 7778888 76 567788999 99998554
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=99.86 E-value=1.9e-20 Score=192.70 Aligned_cols=122 Identities=22% Similarity=0.363 Sum_probs=92.4
Q ss_pred EEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCC
Q 035617 73 DVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTS 152 (422)
Q Consensus 73 ~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~ 152 (422)
.+...||..++++..... .+|+|||+||++++...| ..++..| ..||+|+++|+||||.|.+...
T Consensus 6 ~~~~~~g~~l~~~~~g~~--------~~~~ivllHG~~~~~~~w------~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~ 70 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDP--------DRPTVVLVHGYPDNHEVW------DGVAPLL-ADRFRVVAYDVRGAGRSSAPKR 70 (582)
T ss_pred EEEeeCCEEEEEEEcCCC--------CCCeEEEEcCCCchHHHH------HHHHHHh-hcceEEEEecCCCCCCCCCCCc
Confidence 344568878877665432 368999999999999998 4566668 4589999999999999975322
Q ss_pred CCCCcccccccChHHHHhchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecc
Q 035617 153 LDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
.. .|++++++ +|+.++++.+ + .+++|+||||||.+++.++...+.+.++..++.+++
T Consensus 71 ~~-------~~~~~~~a-~dl~~~i~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 71 TA-------AYTLARLA-DDFAAVIDAV----SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred cc-------ccCHHHHH-HHHHHHHHHh----CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 11 56888877 7888888776 5 559999999999999988877555566766666553
No 53
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.86 E-value=3e-20 Score=167.72 Aligned_cols=282 Identities=18% Similarity=0.124 Sum_probs=170.4
Q ss_pred CceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCC
Q 035617 66 GYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTR 145 (422)
Q Consensus 66 ~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G 145 (422)
...+....+.++||..+...+...+ .+..+|.||++||+.+++.+-+ -+.++..+.++||.|+++|+|||+
T Consensus 46 ~~~~~re~v~~pdg~~~~ldw~~~p-----~~~~~P~vVl~HGL~G~s~s~y----~r~L~~~~~~rg~~~Vv~~~Rgcs 116 (345)
T COG0429 46 KVAYTRERLETPDGGFIDLDWSEDP-----RAAKKPLVVLFHGLEGSSNSPY----ARGLMRALSRRGWLVVVFHFRGCS 116 (345)
T ss_pred ccccceEEEEcCCCCEEEEeeccCc-----cccCCceEEEEeccCCCCcCHH----HHHHHHHHHhcCCeEEEEeccccc
Confidence 4445667899999988887666544 2256799999999999888643 378899999999999999999999
Q ss_pred CCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 146 FSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 146 ~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
.+.....+ -|+.. ..+|+..++++++++.. .++..+|.|+||.+...+..+....-.+.+++.+|.+..
T Consensus 117 ~~~n~~p~--------~yh~G--~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D 186 (345)
T COG0429 117 GEANTSPR--------LYHSG--ETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD 186 (345)
T ss_pred CCcccCcc--------eeccc--chhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHH
Confidence 88642221 11222 23789999999998888 999999999999666655554321125566655554333
Q ss_pred ccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCc
Q 035617 225 LSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQS 304 (422)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (422)
+......+ ...+. . ..+.+.++..+... +.+++ ..+-...+.
T Consensus 187 l~~~~~~l----~~~~s--------~------~ly~r~l~~~L~~~---~~~kl----------------~~l~~~~p~- 228 (345)
T COG0429 187 LEACAYRL----DSGFS--------L------RLYSRYLLRNLKRN---AARKL----------------KELEPSLPG- 228 (345)
T ss_pred HHHHHHHh----cCchh--------h------hhhHHHHHHHHHHH---HHHHH----------------HhcCcccCc-
Confidence 31111000 00000 0 00011111111000 00000 000000000
Q ss_pred chHHHHHHHHHHHhcCCeeeecCCC-----CCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHH-H
Q 035617 305 TSTKNMVHLAQTVRDGVIAKFNYGR-----PDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLY-L 376 (422)
Q Consensus 305 ~s~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~-~ 376 (422)
.. ..+.-+-+.+..||..- ...+...|.+..++...+++|. +|+|||++.+|++++++ -+... .
T Consensus 229 -~~-----~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir--~PtLii~A~DDP~~~~~~iP~~~~~~ 300 (345)
T COG0429 229 -TV-----LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIR--KPTLIINAKDDPFMPPEVIPKLQEML 300 (345)
T ss_pred -HH-----HHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccc--cceEEEecCCCCCCChhhCCcchhcC
Confidence 00 00011112222333211 1346678888888888999999 99999999999999997 33333 3
Q ss_pred hcccCCCCCceeeEEcCCC-cccccc----Cch-hHHHHHHHHHhhhcC
Q 035617 377 CKLFSKSGESLNLICVMSK-SLSFQV----SPQ-LKMIAVMALFQRQAS 419 (422)
Q Consensus 377 l~~~~~~~~~~~~~~i~~~-H~~~~~----~~~-~v~~~i~~fl~~~~~ 419 (422)
. |+ +.+.+-+.+ |..++. .+. -..+.|.+|++..+.
T Consensus 301 n--p~-----v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 301 N--PN-----VLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred C--Cc-----eEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 3 44 888888999 999994 222 344788999987654
No 54
>PRK10566 esterase; Provisional
Probab=99.86 E-value=3.8e-20 Score=169.54 Aligned_cols=122 Identities=20% Similarity=0.283 Sum_probs=84.1
Q ss_pred EEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCccccc
Q 035617 82 LNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFW 161 (422)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~ 161 (422)
..+.++|.+. .+++.|+||++||++++...| ..+++.|+++||+|+++|+||||.+..... ...-..+|
T Consensus 13 ~~~~~~p~~~----~~~~~p~vv~~HG~~~~~~~~------~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-~~~~~~~~ 81 (249)
T PRK10566 13 EVLHAFPAGQ----RDTPLPTVFFYHGFTSSKLVY------SYFAVALAQAGFRVIMPDAPMHGARFSGDE-ARRLNHFW 81 (249)
T ss_pred ceEEEcCCCC----CCCCCCEEEEeCCCCcccchH------HHHHHHHHhCCCEEEEecCCcccccCCCcc-ccchhhHH
Confidence 4455666542 224579999999999888775 568888999999999999999997632111 00111111
Q ss_pred ccChHHHHhchHHHHHHHHHHHh--C-CeEEEEEeChhHHHHHHHHhccchhhhHhheeee
Q 035617 162 NWSWDELVAYDLPAVFDHVYEQT--G-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALL 219 (422)
Q Consensus 162 ~~~~~~~~~~D~~~~i~~i~~~~--~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~ 219 (422)
..-....+|+.++++++.+.. + ++|+++||||||.+++.++.+.+ .+++.+.+
T Consensus 82 --~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~---~~~~~~~~ 137 (249)
T PRK10566 82 --QILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHP---WVKCVASL 137 (249)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCC---CeeEEEEe
Confidence 111123467888899987763 3 78999999999999999988765 35554443
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.86 E-value=2.8e-20 Score=172.61 Aligned_cols=128 Identities=21% Similarity=0.147 Sum_probs=91.9
Q ss_pred EEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCc-ccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCC
Q 035617 72 IDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGL-TWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRH 150 (422)
Q Consensus 72 ~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~-~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~ 150 (422)
+.+.+ +|..+......+.. ..+++||++||..+... .|.. ...+++.|+++||+|+++|+||||.|.+.
T Consensus 5 ~~~~~-~~~~l~g~~~~p~~------~~~~~vv~i~gg~~~~~g~~~~---~~~la~~l~~~G~~v~~~Dl~G~G~S~~~ 74 (274)
T TIGR03100 5 LTFSC-EGETLVGVLHIPGA------SHTTGVLIVVGGPQYRVGSHRQ---FVLLARRLAEAGFPVLRFDYRGMGDSEGE 74 (274)
T ss_pred EEEEc-CCcEEEEEEEcCCC------CCCCeEEEEeCCccccCCchhH---HHHHHHHHHHCCCEEEEeCCCCCCCCCCC
Confidence 44444 45556655444332 23567888887654332 2211 24578899999999999999999998752
Q ss_pred CCCCCCcccccccChHHHHhchHHHHHHHHHHHh-C-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 151 TSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQT-G-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~-~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
. .++.+.. +|+.++++++.+.. + ++++++||||||.+++.++..+ .+|+++|+++|...
T Consensus 75 ~-----------~~~~~~~-~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~---~~v~~lil~~p~~~ 135 (274)
T TIGR03100 75 N-----------LGFEGID-ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD---LRVAGLVLLNPWVR 135 (274)
T ss_pred C-----------CCHHHHH-HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC---CCccEEEEECCccC
Confidence 1 2444544 89999999998775 4 7899999999999999987643 47999999999743
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.85 E-value=3.1e-20 Score=162.29 Aligned_cols=215 Identities=20% Similarity=0.185 Sum_probs=155.5
Q ss_pred eeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHh-CCCeEEEeCCCCCCC
Q 035617 68 KCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILAD-HGFDVWIANTRGTRF 146 (422)
Q Consensus 68 ~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~-~g~~v~~~d~rG~G~ 146 (422)
..+-..++|..|..+...++.+.. ...++||++||+....+. ...+-..|.. -.++|+.+|++|+|.
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~------~~~~~lly~hGNa~Dlgq------~~~~~~~l~~~ln~nv~~~DYSGyG~ 101 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE------AAHPTLLYSHGNAADLGQ------MVELFKELSIFLNCNVVSYDYSGYGR 101 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc------ccceEEEEcCCcccchHH------HHHHHHHHhhcccceEEEEecccccc
Confidence 346778899999888887776664 246999999999665552 2223233433 379999999999999
Q ss_pred CCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 147 SRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 147 S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
|.+.++... ..+|+.++.+++++..| ++|.|+|+|+|+..++.+|++.| ++++|+.+|...
T Consensus 102 S~G~psE~n-------------~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S 164 (258)
T KOG1552|consen 102 SSGKPSERN-------------LYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTS 164 (258)
T ss_pred cCCCccccc-------------chhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchh
Confidence 998554221 34899999999999995 99999999999999999999775 999999999742
Q ss_pred ccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCc
Q 035617 225 LSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQS 304 (422)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (422)
... . +.|... ..
T Consensus 165 ~~r-------v-----------------~~~~~~----------------------------------~~---------- 176 (258)
T KOG1552|consen 165 GMR-------V-----------------AFPDTK----------------------------------TT---------- 176 (258)
T ss_pred hhh-------h-----------------hccCcc----------------------------------eE----------
Confidence 210 0 000000 00
Q ss_pred chHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCC
Q 035617 305 TSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSK 382 (422)
Q Consensus 305 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~ 382 (422)
-++|.- .+ ...+..|+ ||||++||++|.++|.. +++++.. ++
T Consensus 177 ------------------~~~d~f---~~----------i~kI~~i~--~PVLiiHgtdDevv~~sHg~~Lye~~--k~- 220 (258)
T KOG1552|consen 177 ------------------YCFDAF---PN----------IEKISKIT--CPVLIIHGTDDEVVDFSHGKALYERC--KE- 220 (258)
T ss_pred ------------------Eeeccc---cc----------cCcceecc--CCEEEEecccCceecccccHHHHHhc--cc-
Confidence 001100 00 01466776 99999999999999999 9999999 76
Q ss_pred CCCceeeEEcCCC-ccccccCchhHHHHHHHHHhhhcC
Q 035617 383 SGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 383 ~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~~~ 419 (422)
..+-.++.++ |++.. ...++.+.+.+|+.....
T Consensus 221 ---~~epl~v~g~gH~~~~-~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 221 ---KVEPLWVKGAGHNDIE-LYPEYIEHLRRFISSVLP 254 (258)
T ss_pred ---cCCCcEEecCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 3577788899 98864 555788888888876544
No 57
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.85 E-value=9.7e-20 Score=203.48 Aligned_cols=261 Identities=18% Similarity=0.159 Sum_probs=147.4
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
.+++|||+||++++...| ..++..|.+ +|+|+++|+||||.|............ -.+++++++ +|+.++++
T Consensus 1370 ~~~~vVllHG~~~s~~~w------~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~-~~~si~~~a-~~l~~ll~ 1440 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDW------IPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTE-PTLSVELVA-DLLYKLIE 1440 (1655)
T ss_pred CCCeEEEECCCCCCHHHH------HHHHHHHhC-CCEEEEEcCCCCCCCCCcccccccccc-ccCCHHHHH-HHHHHHHH
Confidence 468999999999999998 456666865 699999999999999753221100011 145677766 66666555
Q ss_pred HHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCC
Q 035617 179 HVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKG 257 (422)
Q Consensus 179 ~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~ 257 (422)
.+ + ++++++||||||.+++.++.++| ++|+++|++++.............. .........+ .+..
T Consensus 1441 ~l----~~~~v~LvGhSmGG~iAl~~A~~~P--~~V~~lVlis~~p~~~~~~~~~~~~---~~~~~~~~~l-----~~~g 1506 (1655)
T PLN02980 1441 HI----TPGKVTLVGYSMGARIALYMALRFS--DKIEGAVIISGSPGLKDEVARKIRS---AKDDSRARML-----IDHG 1506 (1655)
T ss_pred Hh----CCCCEEEEEECHHHHHHHHHHHhCh--HhhCEEEEECCCCccCchHHHHHHh---hhhhHHHHHH-----Hhhh
Confidence 44 7 89999999999999999998776 8999999998754322111110000 0000000000 0000
Q ss_pred hhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCcccccc
Q 035617 258 KPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHY 337 (422)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 337 (422)
...+...+... .+.... .....+...............+.........+ ...+.
T Consensus 1507 --~~~~~~~~~~~------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~dl---------- 1560 (1655)
T PLN02980 1507 --LEIFLENWYSG------ELWKSL------RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIG--RQPSL---------- 1560 (1655)
T ss_pred --HHHHHHHhccH------HHhhhh------ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhc--ccchH----------
Confidence 00000000000 000000 00000000110000000011111111111000 00000
Q ss_pred CCCCCccccCCCCCCCccEEEEEeCCCccCChh-HHHHHHhcccCCC-------CCceeeEEcCCC-ccccccCchhHHH
Q 035617 338 GEFRPPIYNISNIPHDLPLFVSYGGNDALADLT-QYLLYLCKLFSKS-------GESLNLICVMSK-SLSFQVSPQLKMI 408 (422)
Q Consensus 338 ~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~-~~l~~~l~~~~~~-------~~~~~~~~i~~~-H~~~~~~~~~v~~ 408 (422)
.-.+.+|+ +|+|+|+|++|.+++.. +++.+.+ ++.. ...++++++|++ |..++|+|+++++
T Consensus 1561 ------~~~L~~I~--~PtLlI~Ge~D~~~~~~a~~~~~~i--~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~ 1630 (1655)
T PLN02980 1561 ------WEDLKQCD--TPLLLVVGEKDVKFKQIAQKMYREI--GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIR 1630 (1655)
T ss_pred ------HHHHhhCC--CCEEEEEECCCCccHHHHHHHHHHc--cccccccccccccceEEEEECCCCCchHHHCHHHHHH
Confidence 01467777 99999999999988644 7788887 6510 012589999999 9999999999999
Q ss_pred HHHHHHhhhc
Q 035617 409 AVMALFQRQA 418 (422)
Q Consensus 409 ~i~~fl~~~~ 418 (422)
.|.+||++..
T Consensus 1631 ~I~~FL~~~~ 1640 (1655)
T PLN02980 1631 ALRKFLTRLH 1640 (1655)
T ss_pred HHHHHHHhcc
Confidence 9999998864
No 58
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=4.8e-19 Score=165.80 Aligned_cols=287 Identities=16% Similarity=0.152 Sum_probs=173.6
Q ss_pred CceeeEEEEECCCCcEEEEEEeeCCCCC-CCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC
Q 035617 66 GYKCQEIDVTTKDGYILNLQRIPEGRAA-GGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGT 144 (422)
Q Consensus 66 ~~~~e~~~v~t~dG~~l~~~~~~~~~~~-~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~ 144 (422)
...+++..++++||..+.+-+....... ..+....|.||++||+.+++..-+ -+.++..+.++||+|+++|.||+
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~Y----Vr~lv~~a~~~G~r~VVfN~RG~ 165 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESY----VRHLVHEAQRKGYRVVVFNHRGL 165 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHH----HHHHHHHHHhCCcEEEEECCCCC
Confidence 5567888999999999999887444311 112346799999999999887633 37888889999999999999999
Q ss_pred CCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhh-hHhheeeecch
Q 035617 145 RFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVD-KLKSAALLSPI 222 (422)
Q Consensus 145 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~-~v~~~v~~~p~ 222 (422)
|+|.-...+. |+... .+|+.+++++++++.+ .+++.+|.||||++.+.|+.+..... .+.++++.+|+
T Consensus 166 ~g~~LtTpr~--------f~ag~--t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 166 GGSKLTTPRL--------FTAGW--TEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred CCCccCCCce--------eecCC--HHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 9886532211 22211 3789999999999999 99999999999999999999853223 55666666676
Q ss_pred hhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCC
Q 035617 223 AYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEP 302 (422)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 302 (422)
.... ....+.....+.+.+ +.+...++.....-...++. +....+...
T Consensus 236 d~~~-~~~~~~~~~~~~~y~------------------~~l~~~l~~~~~~~r~~~~~---------~~vd~d~~~---- 283 (409)
T KOG1838|consen 236 DLLA-ASRSIETPLYRRFYN------------------RALTLNLKRIVLRHRHTLFE---------DPVDFDVIL---- 283 (409)
T ss_pred hhhh-hhhHHhcccchHHHH------------------HHHHHhHHHHHhhhhhhhhh---------ccchhhhhh----
Confidence 4320 000000000000000 00000000000000000000 000000000
Q ss_pred CcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh---HHHHHHhcc
Q 035617 303 QSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT---QYLLYLCKL 379 (422)
Q Consensus 303 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~---~~l~~~l~~ 379 (422)
.. +++.++...+..- .|. .++...|.+..++...+.+|+ +|+|+|++.+|+++|+. ....++-
T Consensus 284 ~~---~SvreFD~~~t~~---~~g----f~~~deYY~~aSs~~~v~~I~--VP~L~ina~DDPv~p~~~ip~~~~~~n-- 349 (409)
T KOG1838|consen 284 KS---RSVREFDEALTRP---MFG----FKSVDEYYKKASSSNYVDKIK--VPLLCINAADDPVVPEEAIPIDDIKSN-- 349 (409)
T ss_pred hc---CcHHHHHhhhhhh---hcC----CCcHHHHHhhcchhhhccccc--ccEEEEecCCCCCCCcccCCHHHHhcC--
Confidence 00 1222222222110 111 345667777777888899999 99999999999999997 4444444
Q ss_pred cCCCCCceeeEEcCCC-ccccccC----chhHHHH-HHHHHhhh
Q 035617 380 FSKSGESLNLICVMSK-SLSFQVS----PQLKMIA-VMALFQRQ 417 (422)
Q Consensus 380 ~~~~~~~~~~~~i~~~-H~~~~~~----~~~v~~~-i~~fl~~~ 417 (422)
|+ +-+.+-..+ |+.++|. +....+. +.+|+...
T Consensus 350 p~-----v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 350 PN-----VLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred Cc-----EEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 55 767777788 9999965 2233344 67777653
No 59
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.83 E-value=1e-19 Score=151.53 Aligned_cols=243 Identities=13% Similarity=0.089 Sum_probs=154.8
Q ss_pred CCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCc-ccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCC
Q 035617 78 DGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGL-TWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPS 156 (422)
Q Consensus 78 dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~-~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~ 156 (422)
+|..|.+.....+ ...||++.|..++.. +|.++. -..+...-+.|++.|.||+|.|..+..
T Consensus 29 ng~ql~y~~~G~G---------~~~iLlipGalGs~~tDf~pql-----~~l~k~l~~TivawDPpGYG~SrPP~R---- 90 (277)
T KOG2984|consen 29 NGTQLGYCKYGHG---------PNYILLIPGALGSYKTDFPPQL-----LSLFKPLQVTIVAWDPPGYGTSRPPER---- 90 (277)
T ss_pred cCceeeeeecCCC---------CceeEecccccccccccCCHHH-----HhcCCCCceEEEEECCCCCCCCCCCcc----
Confidence 5777777666555 358999999877665 564332 222222248999999999999975322
Q ss_pred cccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHH
Q 035617 157 QMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVI 235 (422)
Q Consensus 157 ~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~ 235 (422)
+|..+- ...|...++|.. +... +++.++|+|=||.+++..|++++ +.|..+++++..++......-...-
T Consensus 91 -----kf~~~f-f~~Da~~avdLM-~aLk~~~fsvlGWSdGgiTalivAak~~--e~v~rmiiwga~ayvn~~~~ma~kg 161 (277)
T KOG2984|consen 91 -----KFEVQF-FMKDAEYAVDLM-EALKLEPFSVLGWSDGGITALIVAAKGK--EKVNRMIIWGAAAYVNHLGAMAFKG 161 (277)
T ss_pred -----cchHHH-HHHhHHHHHHHH-HHhCCCCeeEeeecCCCeEEEEeeccCh--hhhhhheeecccceecchhHHHHhc
Confidence 334443 348888888877 5556 99999999999999999999776 8999999999988876554322211
Q ss_pred HhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHH
Q 035617 236 AAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQ 315 (422)
Q Consensus 236 ~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 315 (422)
+... ..+.+. .|+- +..+....+-.+....|..
T Consensus 162 iRdv-----------~kWs~r---~R~P---------------------------------~e~~Yg~e~f~~~wa~wvD 194 (277)
T KOG2984|consen 162 IRDV-----------NKWSAR---GRQP---------------------------------YEDHYGPETFRTQWAAWVD 194 (277)
T ss_pred hHHH-----------hhhhhh---hcch---------------------------------HHHhcCHHHHHHHHHHHHH
Confidence 1000 000000 0000 0000000000001111111
Q ss_pred HHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcC
Q 035617 316 TVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVM 393 (422)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~ 393 (422)
.+. .|..+--|+- +.-.+++|+ ||+||++|++|++++.. -.+.... +. .+++++|
T Consensus 195 ~v~--qf~~~~dG~f------------Cr~~lp~vk--cPtli~hG~kDp~~~~~hv~fi~~~~--~~-----a~~~~~p 251 (277)
T KOG2984|consen 195 VVD--QFHSFCDGRF------------CRLVLPQVK--CPTLIMHGGKDPFCGDPHVCFIPVLK--SL-----AKVEIHP 251 (277)
T ss_pred HHH--HHhhcCCCch------------Hhhhccccc--CCeeEeeCCcCCCCCCCCccchhhhc--cc-----ceEEEcc
Confidence 111 0111111110 112678888 99999999999999888 5555555 54 8899999
Q ss_pred CC-ccccccCchhHHHHHHHHHhhh
Q 035617 394 SK-SLSFQVSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 394 ~~-H~~~~~~~~~v~~~i~~fl~~~ 417 (422)
++ |+.++..+++++..+++||++.
T Consensus 252 eGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 252 EGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCCcceeeechHHHHHHHHHHHhcc
Confidence 99 9999999999999999999875
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.82 E-value=8e-19 Score=189.79 Aligned_cols=281 Identities=16% Similarity=0.176 Sum_probs=161.2
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..++||||+||+..+...|....+ +++..+|.++||+||++|+ |.|+.... ++++++.+++ .++.+.+
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~-~s~v~~L~~~g~~v~~~d~---G~~~~~~~-------~~~~~l~~~i-~~l~~~l 132 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRD-DGAVGILHRAGLDPWVIDF---GSPDKVEG-------GMERNLADHV-VALSEAI 132 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCc-ccHHHHHHHCCCEEEEEcC---CCCChhHc-------CccCCHHHHH-HHHHHHH
Confidence 356999999999999999987644 7889999999999999995 55543211 1145777777 5677788
Q ss_pred HHHHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccch---hhH--HHHHHhhhcHHHHHHHhcCcc
Q 035617 178 DHVYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYM---RTA--LGVIAAKSFVGEITTLLGLAE 252 (422)
Q Consensus 178 ~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~---~~~--~~~~~~~~~~~~~~~~~g~~~ 252 (422)
+.+.+..+++++++||||||++++.+++.++ +++|++++++++....... .-+ ..........+.+....
T Consensus 133 ~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~-~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 207 (994)
T PRK07868 133 DTVKDVTGRDVHLVGYSQGGMFCYQAAAYRR-SKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRL---- 207 (994)
T ss_pred HHHHHhhCCceEEEEEChhHHHHHHHHHhcC-CCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcC----
Confidence 8776665588999999999999998877432 2589999988876543211 000 00000000000000000
Q ss_pred ccCCChhHHHHHHHhccCCcc--chhhhhhhhcCCCCCCCchhhhhhhhcC-CCcchHHHHHHHHHHHh-cCCee--eec
Q 035617 253 FNPKGKPVADFLKSLCTNPVV--NCYDLLTSLTGRNCCLNSSTVDLFLRNE-PQSTSTKNMVHLAQTVR-DGVIA--KFN 326 (422)
Q Consensus 253 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~-~~~~~--~~~ 326 (422)
.+|.. .......+...... ...+++..+.+.....+++.+..+.... ....+-.....+...+. .+.+. .+.
T Consensus 208 ~~p~~--~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~ 285 (994)
T PRK07868 208 DIPGW--MARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFA 285 (994)
T ss_pred CCCHH--HHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEE
Confidence 11110 00000011110000 0111222222222223333333333222 00000011111211111 10100 011
Q ss_pred CCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceee-EEcCCC-ccccc--
Q 035617 327 YGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNL-ICVMSK-SLSFQ-- 400 (422)
Q Consensus 327 ~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~-~~i~~~-H~~~~-- 400 (422)
.+. -...+++|+ +|+|+++|++|.++|++ +.+.+.+ ++ .++ +.++++ |+.++
T Consensus 286 ~~~-------------~~~~L~~i~--~P~L~i~G~~D~ivp~~~~~~l~~~i--~~-----a~~~~~~~~~GH~g~~~g 343 (994)
T PRK07868 286 ING-------------QMVTLADIT--CPVLAFVGEVDDIGQPASVRGIRRAA--PN-----AEVYESLIRAGHFGLVVG 343 (994)
T ss_pred ECC-------------EEcchhhCC--CCEEEEEeCCCCCCCHHHHHHHHHhC--CC-----CeEEEEeCCCCCEeeeec
Confidence 000 001578888 99999999999999998 8888888 77 555 577898 99998
Q ss_pred -cCchhHHHHHHHHHhhhcC
Q 035617 401 -VSPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 401 -~~~~~v~~~i~~fl~~~~~ 419 (422)
..++++|..|.+||+++..
T Consensus 344 ~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 344 SRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhhhhhChHHHHHHHHhcc
Confidence 8899999999999998754
No 61
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.81 E-value=9.4e-19 Score=158.62 Aligned_cols=255 Identities=17% Similarity=0.191 Sum_probs=148.0
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADH-GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~-g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
.+.|+++++||+.++...| .++++.|++. |-+|+++|.|.||.|.... .++.++++ +|+...
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw------~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~----------~h~~~~ma-~dv~~F 112 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENW------RSVAKNLSRKLGRDVYAVDVRNHGSSPKIT----------VHNYEAMA-EDVKLF 112 (315)
T ss_pred CCCCceEEecccccCCCCH------HHHHHHhcccccCceEEEecccCCCCcccc----------ccCHHHHH-HHHHHH
Confidence 4679999999999999999 7888888764 6799999999999997533 34567767 899998
Q ss_pred HHHHHHHhC-CeEEEEEeChhH-HHHHHHHhccchhhhHhheeeec--chhhccchhhHHHHHHhhhcHHHHHHHhcCcc
Q 035617 177 FDHVYEQTG-QKIHYVGHSLGT-LIALASFSEGLQVDKLKSAALLS--PIAYLSYMRTALGVIAAKSFVGEITTLLGLAE 252 (422)
Q Consensus 177 i~~i~~~~~-~~i~l~G~S~Gg-~~a~~~~~~~~~~~~v~~~v~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 252 (422)
++.+...+. .++.++|||||| .+++..+...| +.+..+|++. |........ .....+. .......
T Consensus 113 i~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p--~~~~rliv~D~sP~~~~~~~~-e~~e~i~--------~m~~~d~ 181 (315)
T KOG2382|consen 113 IDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKP--DLIERLIVEDISPGGVGRSYG-EYRELIK--------AMIQLDL 181 (315)
T ss_pred HHHcccccccCCceecccCcchHHHHHHHHHhcC--cccceeEEEecCCccCCcccc-hHHHHHH--------HHHhccc
Confidence 888866555 899999999999 44455444444 6677666653 322111111 1111100 0000000
Q ss_pred ccCCChhHHHHHHHhccC--CccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCC
Q 035617 253 FNPKGKPVADFLKSLCTN--PVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRP 330 (422)
Q Consensus 253 ~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 330 (422)
..+...-...+.+.++.- ....+..+...+.. .......... .....+.......+ + ..+..
T Consensus 182 ~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~-------~~~~~s~~w~---~nl~~i~~~~~~~~---~--~s~~~- 245 (315)
T KOG2382|consen 182 SIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKK-------SPSDGSFLWR---VNLDSIASLLDEYE---I--LSYWA- 245 (315)
T ss_pred cccccccHHHHHHHHHHHhcchHHHHHHHHhcCc-------CCCCCceEEE---eCHHHHHHHHHHHH---h--hcccc-
Confidence 000001112222222211 00011111111110 0000000000 00111111111111 0 00100
Q ss_pred CccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHH
Q 035617 331 DYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKM 407 (422)
Q Consensus 331 ~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~ 407 (422)
.+++-+.+.|||++.|.++..++.+ ..+.+.+ |+ +++++++++ |+++.|+|+++.
T Consensus 246 ---------------~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~f--p~-----~e~~~ld~aGHwVh~E~P~~~~ 303 (315)
T KOG2382|consen 246 ---------------DLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIF--PN-----VEVHELDEAGHWVHLEKPEEFI 303 (315)
T ss_pred ---------------cccccccccceeEEecCCCCCcChhHHHHHHHhc--cc-----hheeecccCCceeecCCHHHHH
Confidence 1211112379999999999999999 7777777 77 999999999 999999999999
Q ss_pred HHHHHHHhhhc
Q 035617 408 IAVMALFQRQA 418 (422)
Q Consensus 408 ~~i~~fl~~~~ 418 (422)
+.|.+|+++..
T Consensus 304 ~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 304 ESISEFLEEPE 314 (315)
T ss_pred HHHHHHhcccC
Confidence 99999998764
No 62
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.79 E-value=2.3e-18 Score=176.67 Aligned_cols=250 Identities=18% Similarity=0.209 Sum_probs=166.8
Q ss_pred cCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC
Q 035617 65 HGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGT 144 (422)
Q Consensus 65 ~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~ 144 (422)
...+.|.+.+++.||..++.+.+.+.... +.++-|+||++||.+.....|. .....+.|+.+||.|+.+|+||.
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~--~~k~yP~i~~~hGGP~~~~~~~----~~~~~q~~~~~G~~V~~~n~RGS 434 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFD--PRKKYPLIVYIHGGPSAQVGYS----FNPEIQVLASAGYAVLAPNYRGS 434 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCC--CCCCCCEEEEeCCCCccccccc----cchhhHHHhcCCeEEEEeCCCCC
Confidence 35567889999999999999988776421 1122489999999987666642 46677789999999999999986
Q ss_pred CCC-CCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeec
Q 035617 145 RFS-RRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLS 220 (422)
Q Consensus 145 G~S-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~ 220 (422)
+.- ....... .-.+.+...+|+.+.++++.+..- +++.++|||.||.+++.++.+.+ .+++.+..+
T Consensus 435 ~GyG~~F~~~~-------~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~---~f~a~~~~~ 504 (620)
T COG1506 435 TGYGREFADAI-------RGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP---RFKAAVAVA 504 (620)
T ss_pred CccHHHHHHhh-------hhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc---hhheEEecc
Confidence 432 1100000 002222234788899996644433 58999999999999999988765 788888777
Q ss_pred chhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhc
Q 035617 221 PIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRN 300 (422)
Q Consensus 221 p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (422)
+...... .++.... + .+ ...
T Consensus 505 ~~~~~~~-------------------~~~~~~~-~----~~---------------------------~~~--------- 524 (620)
T COG1506 505 GGVDWLL-------------------YFGESTE-G----LR---------------------------FDP--------- 524 (620)
T ss_pred Ccchhhh-------------------hccccch-h----hc---------------------------CCH---------
Confidence 6542110 0000000 0 00 000
Q ss_pred CCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhc
Q 035617 301 EPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCK 378 (422)
Q Consensus 301 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~ 378 (422)
+... .+.+. +.+.| ...+|.....+|+ +|+|+|||++|..|+.+ ..+++.|
T Consensus 525 --------------~~~~--------~~~~~-~~~~~-~~~sp~~~~~~i~--~P~LliHG~~D~~v~~~q~~~~~~aL- 577 (620)
T COG1506 525 --------------EENG--------GGPPE-DREKY-EDRSPIFYADNIK--TPLLLIHGEEDDRVPIEQAEQLVDAL- 577 (620)
T ss_pred --------------HHhC--------CCccc-ChHHH-HhcChhhhhcccC--CCEEEEeecCCccCChHHHHHHHHHH-
Confidence 0000 00000 11111 1223555778888 99999999999999999 8888888
Q ss_pred ccCCCCCceeeEEcCCC-ccccc-cCchhHHHHHHHHHhhhcC
Q 035617 379 LFSKSGESLNLICVMSK-SLSFQ-VSPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 379 ~~~~~~~~~~~~~i~~~-H~~~~-~~~~~v~~~i~~fl~~~~~ 419 (422)
.. .+..++++.+|+. |.... ++...+++.+++|+++++.
T Consensus 578 -~~-~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 578 -KR-KGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred -HH-cCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 53 2346899999999 98887 7788899999999999875
No 63
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.78 E-value=1.7e-18 Score=157.93 Aligned_cols=135 Identities=20% Similarity=0.163 Sum_probs=102.8
Q ss_pred EEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCC
Q 035617 71 EIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRH 150 (422)
Q Consensus 71 ~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~ 150 (422)
.+++++++|.....++.+... .++|+||++||+++....|... ...+++.|+++||+|+++|+||||.|.+.
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~~------~~~~~VlllHG~g~~~~~~~~~--~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~ 73 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVAV------GPRGVVIYLPPFAEEMNKSRRM--VALQARAFAAGGFGVLQIDLYGCGDSAGD 73 (266)
T ss_pred CEEecCCCCcEEEEEecCCCC------CCceEEEEECCCcccccchhHH--HHHHHHHHHHCCCEEEEECCCCCCCCCCc
Confidence 357778888766555555442 3468999999998754432100 14568889999999999999999999764
Q ss_pred CCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 151 TSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
.. +.++..+. +|+.++++++.+. + .+++++||||||.+++.++.+++ ++++++|+++|+....
T Consensus 74 ~~---------~~~~~~~~-~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p--~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 74 FA---------AARWDVWK-EDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLA--AKCNRLVLWQPVVSGK 137 (266)
T ss_pred cc---------cCCHHHHH-HHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCc--cccceEEEeccccchH
Confidence 32 34666656 8999999999664 6 89999999999999999988765 7899999999976543
No 64
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.78 E-value=4.6e-17 Score=157.10 Aligned_cols=279 Identities=13% Similarity=0.088 Sum_probs=149.1
Q ss_pred CCCcEEEecCCCCCCcc-------------cccC-CCCCCHHHHHHhCCCeEEEeCCCCCCC-------CCCCCCCCCCc
Q 035617 99 KRPPVLIQHGVLVDGLT-------------WLLN-PPEQNLPLILADHGFDVWIANTRGTRF-------SRRHTSLDPSQ 157 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~-------------~~~~-~~~~~l~~~l~~~g~~v~~~d~rG~G~-------S~~~~~~~~~~ 157 (422)
+.++||++|++++++.. |... ++. +.|--..|-|+++|..|.|. |.++.+..|..
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g----~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~t 130 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPG----KAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKT 130 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCC----CCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCC
Confidence 45899999999996532 3211 111 12333469999999999886 33433333432
Q ss_pred c-----cccccChHHHHhchHHHHHHHHHHHhC-CeEE-EEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchh-
Q 035617 158 M-----EFWNWSWDELVAYDLPAVFDHVYEQTG-QKIH-YVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMR- 229 (422)
Q Consensus 158 ~-----~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~-l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~- 229 (422)
. .|-.+++.+++ +|+.++++. .+ ++++ ++||||||++++.++.++| ++|+++|+++.........
T Consensus 131 g~~~~~~fP~~t~~d~~-~~~~~ll~~----lgi~~~~~vvG~SmGG~ial~~a~~~P--~~v~~lv~ia~~~~~~~~~~ 203 (389)
T PRK06765 131 GKPYGMDFPVVTILDFV-RVQKELIKS----LGIARLHAVMGPSMGGMQAQEWAVHYP--HMVERMIGVIGNPQNDAWTS 203 (389)
T ss_pred CCccCCCCCcCcHHHHH-HHHHHHHHH----cCCCCceEEEEECHHHHHHHHHHHHCh--HhhheEEEEecCCCCChhHH
Confidence 2 35457888877 566665544 48 8886 9999999999999999777 8999999998765433221
Q ss_pred hHHHHHHhhhcHHHHHHH--hcCcccc----CCCh--hHHHHHHHhccCCccchhhhhhhhcCCCC--CCC-------ch
Q 035617 230 TALGVIAAKSFVGEITTL--LGLAEFN----PKGK--PVADFLKSLCTNPVVNCYDLLTSLTGRNC--CLN-------SS 292 (422)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~--~g~~~~~----p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~-------~~ 292 (422)
..+..... ..+..- +....+. |... ..+.+.-.... ....+..-++... ..+ ..
T Consensus 204 ~~~~~~~~----~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~-----s~~~~~~~f~r~~~~~~~~~~~~~~~~ 274 (389)
T PRK06765 204 VNVLQNWA----EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAF-----DEHFYETTFPRNASIEVDPYEKVSTLT 274 (389)
T ss_pred HHHHHHHH----HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcC-----CHHHHHHHcCcCccccccccccccchh
Confidence 11111000 000000 0000111 1100 01111100000 0011110001000 000 00
Q ss_pred hhhhhhhcC----CCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCC
Q 035617 293 TVDLFLRNE----PQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALAD 368 (422)
Q Consensus 293 ~~~~~~~~~----~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~ 368 (422)
.++.|+.+. ........+....+... .+|.+.. ++ .....+.+|+ +|+|+|+|++|.++|
T Consensus 275 ~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~-----~~d~g~~------~~---dl~~~L~~I~--~PtLvI~G~~D~l~p 338 (389)
T PRK06765 275 SFEKEINKATYRRAELVDANHWLYLAKAVQ-----LFDAGHG------FS---SLEEALSNIE--ANVLMIPCKQDLLQP 338 (389)
T ss_pred hHHHHHHHHHHHhhhccChhhHHHHHHHHH-----hcCCccc------cC---CHHHHHhcCC--CCEEEEEeCCCCCCC
Confidence 111111110 01111111111111111 1222110 00 0122567787 999999999999999
Q ss_pred hh--HHHHHHhcccCCCCCceeeEEcCC-C-ccccccCchhHHHHHHHHHhh
Q 035617 369 LT--QYLLYLCKLFSKSGESLNLICVMS-K-SLSFQVSPQLKMIAVMALFQR 416 (422)
Q Consensus 369 ~~--~~l~~~l~~~~~~~~~~~~~~i~~-~-H~~~~~~~~~v~~~i~~fl~~ 416 (422)
++ +++.+.+ ++. ....+++++++ + |+.+++.|+++.+.|.+||++
T Consensus 339 ~~~~~~la~~l--p~~-~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 339 PRYNYKMVDIL--QKQ-GKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHHh--hhc-CCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 98 7788888 631 11378899986 7 999999999999999999975
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.78 E-value=1.9e-18 Score=144.42 Aligned_cols=91 Identities=27% Similarity=0.354 Sum_probs=76.2
Q ss_pred cEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHH
Q 035617 102 PVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVY 181 (422)
Q Consensus 102 ~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~ 181 (422)
+||++||++++...| ..+++.|+++||.|+++|+||+|.+.. ..++..+++.+.
T Consensus 1 ~vv~~HG~~~~~~~~------~~~~~~l~~~G~~v~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY------QPLAEALAEQGYAVVAFDYPGHGDSDG--------------------ADAVERVLADIR 54 (145)
T ss_dssp EEEEECTTTTTTHHH------HHHHHHHHHTTEEEEEESCTTSTTSHH--------------------SHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHH------HHHHHHHHHCCCEEEEEecCCCCccch--------------------hHHHHHHHHHHH
Confidence 689999999998886 678899999999999999999997732 135566777764
Q ss_pred HH-hC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecc
Q 035617 182 EQ-TG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 182 ~~-~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
+. .+ +++.++|||+||.+++.++.+. .+|+++|+++|
T Consensus 55 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~---~~v~~~v~~~~ 93 (145)
T PF12695_consen 55 AGYPDPDRIILIGHSMGGAIAANLAARN---PRVKAVVLLSP 93 (145)
T ss_dssp HHHCTCCEEEEEEETHHHHHHHHHHHHS---TTESEEEEESE
T ss_pred hhcCCCCcEEEEEEccCcHHHHHHhhhc---cceeEEEEecC
Confidence 43 35 9999999999999999998865 38999999998
No 66
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.77 E-value=6.4e-17 Score=158.55 Aligned_cols=260 Identities=14% Similarity=0.120 Sum_probs=159.4
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..+.|||+++.+-.....|++. |.++++++|.++||+||++|+|+-+.+.+ ++++++++ +.+.+++
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~-P~~SlVr~lv~qG~~VflIsW~nP~~~~r------------~~~ldDYv-~~i~~Al 278 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLS-PEKSFVQYCLKNQLQVFIISWRNPDKAHR------------EWGLSTYV-DALKEAV 278 (560)
T ss_pred cCCCcEEEechhhhhhheeecC-CcchHHHHHHHcCCeEEEEeCCCCChhhc------------CCCHHHHH-HHHHHHH
Confidence 4578999999998766666654 56999999999999999999999765544 77999999 5999999
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHH----HHhccchhh-hHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCc
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALA----SFSEGLQVD-KLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLA 251 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~----~~~~~~~~~-~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 251 (422)
+.+++.++ ++|.++|+||||.++.. +++.++ + +|++++++++....... .....+.....+..........
T Consensus 279 d~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~--~~~V~sltllatplDf~~~-g~l~~f~~e~~~~~~e~~~~~~ 355 (560)
T TIGR01839 279 DAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQ--LRKVNSLTYLVSLLDSTME-SPAALFADEQTLEAAKRRSYQA 355 (560)
T ss_pred HHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCC--CCceeeEEeeecccccCCC-CcchhccChHHHHHHHHHHHhc
Confidence 99999999 99999999999999986 666654 4 79999988877654421 1122221111111111111122
Q ss_pred cccCCChhHHHHHHHhccCCccchhhhh-hhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeee---ecC
Q 035617 252 EFNPKGKPVADFLKSLCTNPVVNCYDLL-TSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAK---FNY 327 (422)
Q Consensus 252 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~ 327 (422)
..+|.. .+...+ .+.+....++..+. ..+.|.+....+ +..|......- +-+....+......+.+.. +..
T Consensus 356 G~lpg~-~ma~~F-~~LrP~dliw~y~v~~yllg~~p~~fd--ll~Wn~D~t~l-Pg~~~~e~l~ly~~N~L~~pG~l~v 430 (560)
T TIGR01839 356 GVLDGS-EMAKVF-AWMRPNDLIWNYWVNNYLLGNEPPAFD--ILYWNNDTTRL-PAAFHGDLLDMFKSNPLTRPDALEV 430 (560)
T ss_pred CCcCHH-HHHHHH-HhcCchhhhHHHHHHHhhcCCCcchhh--HHHHhCcCccc-hHHHHHHHHHHHhcCCCCCCCCEEE
Confidence 223321 112222 22233333333322 222333321111 33344333221 1122222333333322211 111
Q ss_pred CCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCCccccc
Q 035617 328 GRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSKSLSFQ 400 (422)
Q Consensus 328 ~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~H~~~~ 400 (422)
+. -..++++|+ ||++++.|++|.++|++ ..+.+.+ .. .++++..+++|..=+
T Consensus 431 ~G-------------~~idL~~I~--~Pvl~va~~~DHIvPw~s~~~~~~l~--gs----~~~fvl~~gGHIggi 484 (560)
T TIGR01839 431 CG-------------TPIDLKKVK--CDSFSVAGTNDHITPWDAVYRSALLL--GG----KRRFVLSNSGHIQSI 484 (560)
T ss_pred CC-------------EEechhcCC--CCeEEEecCcCCcCCHHHHHHHHHHc--CC----CeEEEecCCCccccc
Confidence 11 123789998 99999999999999999 7777777 44 377777766687554
No 67
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.75 E-value=1.2e-17 Score=150.35 Aligned_cols=77 Identities=34% Similarity=0.587 Sum_probs=63.6
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhh
Q 035617 134 FDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDK 212 (422)
Q Consensus 134 ~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~ 212 (422)
|+|+++|+||+|.|+++ |.....++..+|+.+.++.+++..+ ++++++||||||.+++.+++++| ++
T Consensus 1 f~vi~~d~rG~g~S~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p--~~ 68 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----------WDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYP--ER 68 (230)
T ss_dssp EEEEEEECTTSTTSSSC----------CGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSG--GG
T ss_pred CEEEEEeCCCCCCCCCC----------ccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCc--hh
Confidence 78999999999999852 1223333344666688888888889 88999999999999999999877 79
Q ss_pred Hhheeeecch
Q 035617 213 LKSAALLSPI 222 (422)
Q Consensus 213 v~~~v~~~p~ 222 (422)
|+++|+++++
T Consensus 69 v~~lvl~~~~ 78 (230)
T PF00561_consen 69 VKKLVLISPP 78 (230)
T ss_dssp EEEEEEESES
T ss_pred hcCcEEEeee
Confidence 9999999995
No 68
>PRK11071 esterase YqiA; Provisional
Probab=99.75 E-value=3.9e-17 Score=142.66 Aligned_cols=90 Identities=20% Similarity=0.203 Sum_probs=67.3
Q ss_pred CcEEEecCCCCCCcccccCCCCCCHHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 101 PPVLIQHGVLVDGLTWLLNPPEQNLPLILADH--GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 101 ~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~--g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
|+||++||++++...|.. ..+..++++. +|+|+++|+|||| .|..+.++
T Consensus 2 p~illlHGf~ss~~~~~~----~~~~~~l~~~~~~~~v~~~dl~g~~-------------------------~~~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKA----TLLKNWLAQHHPDIEMIVPQLPPYP-------------------------ADAAELLE 52 (190)
T ss_pred CeEEEECCCCCCcchHHH----HHHHHHHHHhCCCCeEEeCCCCCCH-------------------------HHHHHHHH
Confidence 689999999999999832 2345667653 7999999999984 11223444
Q ss_pred HHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 179 HVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 179 ~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
.+.++.+ ++++++||||||.+++.++.+++ . .+|+++|+..
T Consensus 53 ~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~----~-~~vl~~~~~~ 94 (190)
T PRK11071 53 SLVLEHGGDPLGLVGSSLGGYYATWLSQCFM----L-PAVVVNPAVR 94 (190)
T ss_pred HHHHHcCCCCeEEEEECHHHHHHHHHHHHcC----C-CEEEECCCCC
Confidence 4445557 89999999999999999998765 2 4688888643
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.74 E-value=1.8e-17 Score=148.20 Aligned_cols=199 Identities=18% Similarity=0.164 Sum_probs=125.2
Q ss_pred CHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHH
Q 035617 124 NLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIA 200 (422)
Q Consensus 124 ~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a 200 (422)
.-+++|+++||.|+.+|+||.+.....-.... ...+.....+|+.++++++.++.. ++|.++|||+||.++
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~------~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAG------RGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTT------TTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhh------hccccccchhhHHHHHHHHhccccccceeEEEEccccccccc
Confidence 34567999999999999999874322100000 112333445899999999988864 899999999999999
Q ss_pred HHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhh
Q 035617 201 LASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLT 280 (422)
Q Consensus 201 ~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (422)
+.++.+++ ++++++++.+|+............+ ... .....+...
T Consensus 79 ~~~~~~~~--~~f~a~v~~~g~~d~~~~~~~~~~~-~~~----~~~~~~~~~---------------------------- 123 (213)
T PF00326_consen 79 LLAATQHP--DRFKAAVAGAGVSDLFSYYGTTDIY-TKA----EYLEYGDPW---------------------------- 123 (213)
T ss_dssp HHHHHHTC--CGSSEEEEESE-SSTTCSBHHTCCH-HHG----HHHHHSSTT----------------------------
T ss_pred chhhcccc--eeeeeeeccceecchhccccccccc-ccc----cccccCccc----------------------------
Confidence 99988665 7899999999876543221110000 000 000000000
Q ss_pred hhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCC--CCCCccEEE
Q 035617 281 SLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISN--IPHDLPLFV 358 (422)
Q Consensus 281 ~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~--i~~~~Pvli 358 (422)
.+.. .+. ... |...+.+ ++ +|+|+
T Consensus 124 --------~~~~----------------~~~---~~s-------------------------~~~~~~~~~~~--~P~li 149 (213)
T PF00326_consen 124 --------DNPE----------------FYR---ELS-------------------------PISPADNVQIK--PPVLI 149 (213)
T ss_dssp --------TSHH----------------HHH---HHH-------------------------HGGGGGGCGGG--SEEEE
T ss_pred --------hhhh----------------hhh---hhc-------------------------cccccccccCC--CCEEE
Confidence 0000 000 000 1112233 43 89999
Q ss_pred EEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc-cCchhHHHHHHHHHhhhcCc
Q 035617 359 SYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ-VSPQLKMIAVMALFQRQASM 420 (422)
Q Consensus 359 i~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~-~~~~~v~~~i~~fl~~~~~~ 420 (422)
++|++|..||++ ..+++.+ ...+ ...+++++|++ |.... +...+..+.+++|+++++..
T Consensus 150 ~hG~~D~~Vp~~~s~~~~~~L--~~~g-~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 150 IHGENDPRVPPSQSLRLYNAL--RKAG-KPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEETTBSSSTTHHHHHHHHHH--HHTT-SSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred EccCCCCccCHHHHHHHHHHH--HhcC-CCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 999999999999 8888888 5433 34899999999 95554 66678999999999999864
No 70
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.72 E-value=2.2e-16 Score=148.11 Aligned_cols=250 Identities=17% Similarity=0.118 Sum_probs=141.9
Q ss_pred CceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCC
Q 035617 66 GYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTR 145 (422)
Q Consensus 66 ~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G 145 (422)
+..+.++.+.+.+|..++.+...+.. ..++.|+||.+||+++....|.. .. .++.+||.|+.+|.||+|
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~----~~~~~Pavv~~hGyg~~~~~~~~------~~-~~a~~G~~vl~~d~rGqg 121 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKN----AKGKLPAVVQFHGYGGRSGDPFD------LL-PWAAAGYAVLAMDVRGQG 121 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-----SSSSEEEEEEE--TT--GGGHHH------HH-HHHHTT-EEEEE--TTTS
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCC----CCCCcCEEEEecCCCCCCCCccc------cc-ccccCCeEEEEecCCCCC
Confidence 44566788888999999998876653 23567999999999998777632 11 267889999999999999
Q ss_pred CCCCCCC-CC-CCcccccccC---------hHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhh
Q 035617 146 FSRRHTS-LD-PSQMEFWNWS---------WDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVD 211 (422)
Q Consensus 146 ~S~~~~~-~~-~~~~~~~~~~---------~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~ 211 (422)
....... .. +...++.... +..+ ..|...++|++.+... ++|.+.|.|+||.+++.+|+..+
T Consensus 122 ~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~-~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~--- 197 (320)
T PF05448_consen 122 GRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV-YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP--- 197 (320)
T ss_dssp SSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH-HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS---
T ss_pred CCCCCccccCCCCCccHHhcCccCchHHHHHHHH-HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc---
Confidence 3322111 11 1111111111 2233 3789999999987755 79999999999999999998775
Q ss_pred hHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCc
Q 035617 212 KLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNS 291 (422)
Q Consensus 212 ~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 291 (422)
+|+++++..|.. .+....+...........+ ...++..
T Consensus 198 rv~~~~~~vP~l--~d~~~~~~~~~~~~~y~~~----------------~~~~~~~------------------------ 235 (320)
T PF05448_consen 198 RVKAAAADVPFL--CDFRRALELRADEGPYPEI----------------RRYFRWR------------------------ 235 (320)
T ss_dssp T-SEEEEESESS--SSHHHHHHHT--STTTHHH----------------HHHHHHH------------------------
T ss_pred cccEEEecCCCc--cchhhhhhcCCccccHHHH----------------HHHHhcc------------------------
Confidence 899999998853 1211111000000000000 0001000
Q ss_pred hhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh-
Q 035617 292 STVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT- 370 (422)
Q Consensus 292 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~- 370 (422)
.+.....+.+.. .+.- ||- ..-...|+ ||+++-.|-.|.+|||.
T Consensus 236 ---------d~~~~~~~~v~~---~L~Y-----~D~----------------~nfA~ri~--~pvl~~~gl~D~~cPP~t 280 (320)
T PF05448_consen 236 ---------DPHHEREPEVFE---TLSY-----FDA----------------VNFARRIK--CPVLFSVGLQDPVCPPST 280 (320)
T ss_dssp ---------SCTHCHHHHHHH---HHHT-----T-H----------------HHHGGG----SEEEEEEETT-SSS-HHH
T ss_pred ---------CCCcccHHHHHH---HHhh-----hhH----------------HHHHHHcC--CCEEEEEecCCCCCCchh
Confidence 000000011100 0000 110 00245666 99999999999999999
Q ss_pred -HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhH-HHHHHHHHhhh
Q 035617 371 -QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLK-MIAVMALFQRQ 417 (422)
Q Consensus 371 -~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v-~~~i~~fl~~~ 417 (422)
...++.+ +. .+++.++|.+ |-.. .+. .+..++||+++
T Consensus 281 ~fA~yN~i--~~----~K~l~vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 281 QFAAYNAI--PG----PKELVVYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHHHHCC----S----SEEEEEETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred HHHHHhcc--CC----CeeEEeccCcCCCch----hhHHHHHHHHHHhcC
Confidence 8888888 65 5899999999 9554 344 78899999875
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.69 E-value=2.3e-15 Score=140.17 Aligned_cols=146 Identities=19% Similarity=0.307 Sum_probs=92.1
Q ss_pred eEEEEEC-CCCcEEEEE-EeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCC
Q 035617 70 QEIDVTT-KDGYILNLQ-RIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFS 147 (422)
Q Consensus 70 e~~~v~t-~dG~~l~~~-~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S 147 (422)
+.+.+.+ .-|..+.+. ++|+.. ...+.|+|+++||+.++...|... ..+.+.+...|+.|+++|..++|.-
T Consensus 19 ~~~~~~s~~l~~~~~~~vy~P~~~----~~~~~Pvv~~lHG~~~~~~~~~~~---~~~~~~~~~~g~~Vv~pd~~~~g~~ 91 (283)
T PLN02442 19 RRYKHFSSTLGCSMTFSVYFPPAS----DSGKVPVLYWLSGLTCTDENFIQK---SGAQRAAAARGIALVAPDTSPRGLN 91 (283)
T ss_pred EEEEEeccccCCceEEEEEcCCcc----cCCCCCEEEEecCCCcChHHHHHh---hhHHHHHhhcCeEEEecCCCCCCCC
Confidence 3444444 234445554 445522 235679999999999988877432 3456677888999999998877621
Q ss_pred C-CCC-----C-----C-CCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHh
Q 035617 148 R-RHT-----S-----L-DPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLK 214 (422)
Q Consensus 148 ~-~~~-----~-----~-~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~ 214 (422)
. +.. . . +........+.+.++..+++..+++...+..+ ++++++||||||.+++.++.++| ++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p--~~~~ 169 (283)
T PLN02442 92 VEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP--DKYK 169 (283)
T ss_pred CCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc--hhEE
Confidence 0 000 0 0 00000000112233344555566655544456 88999999999999999998776 8899
Q ss_pred heeeecchhh
Q 035617 215 SAALLSPIAY 224 (422)
Q Consensus 215 ~~v~~~p~~~ 224 (422)
++++++|...
T Consensus 170 ~~~~~~~~~~ 179 (283)
T PLN02442 170 SVSAFAPIAN 179 (283)
T ss_pred EEEEECCccC
Confidence 9999998754
No 72
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.67 E-value=2.7e-15 Score=141.88 Aligned_cols=142 Identities=18% Similarity=0.204 Sum_probs=92.9
Q ss_pred chhhhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeE
Q 035617 57 ICASSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDV 136 (422)
Q Consensus 57 ~~~~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v 136 (422)
...+..+..+++.+++.|+.+++.+..+.+.|.+. ++.|+||++-|+-+-..++. .-+.++|+.+|+.+
T Consensus 153 ay~~Aa~l~~~~i~~v~iP~eg~~I~g~LhlP~~~------~p~P~VIv~gGlDs~qeD~~-----~l~~~~l~~rGiA~ 221 (411)
T PF06500_consen 153 AYEKAAKLSDYPIEEVEIPFEGKTIPGYLHLPSGE------KPYPTVIVCGGLDSLQEDLY-----RLFRDYLAPRGIAM 221 (411)
T ss_dssp HHHHHHHHSSSEEEEEEEEETTCEEEEEEEESSSS------S-EEEEEEE--TTS-GGGGH-----HHHHCCCHHCT-EE
T ss_pred HHHHHHHhCCCCcEEEEEeeCCcEEEEEEEcCCCC------CCCCEEEEeCCcchhHHHHH-----HHHHHHHHhCCCEE
Confidence 45566667899999999999886555555666653 45677777777766665542 11223478899999
Q ss_pred EEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhH
Q 035617 137 WIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKL 213 (422)
Q Consensus 137 ~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v 213 (422)
+++|.+|.|.|...+ .++ +++ .+ ..+++||+.+..- .+|.++|.|+||..|..+|..++ ++|
T Consensus 222 LtvDmPG~G~s~~~~-l~~------D~~--~l----~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~--~Rl 286 (411)
T PF06500_consen 222 LTVDMPGQGESPKWP-LTQ------DSS--RL----HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED--PRL 286 (411)
T ss_dssp EEE--TTSGGGTTT--S-S-------CC--HH----HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT--TT-
T ss_pred EEEccCCCcccccCC-CCc------CHH--HH----HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc--cce
Confidence 999999999986533 222 211 11 2378899876643 79999999999999999887554 599
Q ss_pred hheeeecchhh
Q 035617 214 KSAALLSPIAY 224 (422)
Q Consensus 214 ~~~v~~~p~~~ 224 (422)
+++|..+|+..
T Consensus 287 kavV~~Ga~vh 297 (411)
T PF06500_consen 287 KAVVALGAPVH 297 (411)
T ss_dssp SEEEEES---S
T ss_pred eeEeeeCchHh
Confidence 99999999753
No 73
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.65 E-value=2.2e-15 Score=132.16 Aligned_cols=108 Identities=20% Similarity=0.295 Sum_probs=84.5
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADH-GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~-g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
+..|.++++||.+.+.-+| ..++..+... ..+|+++|+||||.+.-... . +++.+.++ .|+-++
T Consensus 72 t~gpil~l~HG~G~S~LSf------A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~-------dlS~eT~~-KD~~~~ 136 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSF------AIFASELKSKIRCRCLALDLRGHGETKVENE-D-------DLSLETMS-KDFGAV 136 (343)
T ss_pred CCccEEEEeecCcccchhH------HHHHHHHHhhcceeEEEeeccccCccccCCh-h-------hcCHHHHH-HHHHHH
Confidence 4689999999999999998 6677667653 46889999999998864221 1 67888888 788888
Q ss_pred HHHHHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHhheeeecc
Q 035617 177 FDHVYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 177 i~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
++++......+|.||||||||.++.+.|.....+. +.+++.+.-
T Consensus 137 i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 137 IKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred HHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 88886555588999999999999998877654444 788877763
No 74
>PLN00021 chlorophyllase
Probab=99.65 E-value=6.3e-15 Score=138.16 Aligned_cols=103 Identities=24% Similarity=0.211 Sum_probs=76.4
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
.+.|+||++||++.+...| ..+++.|+++||.|+++|++|++.+.. ... ..|..+++
T Consensus 50 g~~PvVv~lHG~~~~~~~y------~~l~~~Las~G~~VvapD~~g~~~~~~------------~~~-----i~d~~~~~ 106 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFY------SQLLQHIASHGFIVVAPQLYTLAGPDG------------TDE-----IKDAAAVI 106 (313)
T ss_pred CCCCEEEEECCCCCCcccH------HHHHHHHHhCCCEEEEecCCCcCCCCc------------hhh-----HHHHHHHH
Confidence 4579999999999887765 678888999999999999998643211 001 13445666
Q ss_pred HHHHHH----------hC-CeEEEEEeChhHHHHHHHHhccchh---hhHhheeeecchh
Q 035617 178 DHVYEQ----------TG-QKIHYVGHSLGTLIALASFSEGLQV---DKLKSAALLSPIA 223 (422)
Q Consensus 178 ~~i~~~----------~~-~~i~l~G~S~Gg~~a~~~~~~~~~~---~~v~~~v~~~p~~ 223 (422)
+|+.+. .+ ++++++||||||.+++.++..++.. .+++++++++|+.
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 666542 23 6799999999999999998875421 2688899888864
No 75
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.64 E-value=7.4e-15 Score=128.43 Aligned_cols=140 Identities=21% Similarity=0.218 Sum_probs=102.2
Q ss_pred eeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCC
Q 035617 69 CQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSR 148 (422)
Q Consensus 69 ~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~ 148 (422)
+=+..++..+|..++.|.+-+.. ...+.|.||-.||++++...|..... ++..||.|+.+|.||.|.|.
T Consensus 56 ~ydvTf~g~~g~rI~gwlvlP~~----~~~~~P~vV~fhGY~g~~g~~~~~l~-------wa~~Gyavf~MdvRGQg~~~ 124 (321)
T COG3458 56 VYDVTFTGYGGARIKGWLVLPRH----EKGKLPAVVQFHGYGGRGGEWHDMLH-------WAVAGYAVFVMDVRGQGSSS 124 (321)
T ss_pred EEEEEEeccCCceEEEEEEeecc----cCCccceEEEEeeccCCCCCcccccc-------ccccceeEEEEecccCCCcc
Confidence 34566777899999999997764 23567999999999999988754443 56679999999999999885
Q ss_pred CCCCCCCCc---cccc---------ccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhH
Q 035617 149 RHTSLDPSQ---MEFW---------NWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKL 213 (422)
Q Consensus 149 ~~~~~~~~~---~~~~---------~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v 213 (422)
......+.+ .++. +|=+.. ...|+-.+++-+..-.. ++|.+.|.|+||.+++.+++..+ +|
T Consensus 125 ~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~-v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~---ri 200 (321)
T COG3458 125 QDTADPPGGPSDPGFMTRGILDRKDTYYYRG-VFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP---RI 200 (321)
T ss_pred ccCCCCCCCCcCCceeEeecccCCCceEEee-ehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh---hh
Confidence 422222221 1111 122223 23677788887766544 89999999999999999988765 89
Q ss_pred hheeeecchh
Q 035617 214 KSAALLSPIA 223 (422)
Q Consensus 214 ~~~v~~~p~~ 223 (422)
++++++-|..
T Consensus 201 k~~~~~~Pfl 210 (321)
T COG3458 201 KAVVADYPFL 210 (321)
T ss_pred hccccccccc
Confidence 9999888853
No 76
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.64 E-value=3.2e-14 Score=132.17 Aligned_cols=146 Identities=18% Similarity=0.258 Sum_probs=87.9
Q ss_pred eeEEEEECC-CCcEEEEEEe-eCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCC--CCC
Q 035617 69 CQEIDVTTK-DGYILNLQRI-PEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANT--RGT 144 (422)
Q Consensus 69 ~e~~~v~t~-dG~~l~~~~~-~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~--rG~ 144 (422)
.+.+.+.+. -|..+.+..+ |++. ...+.|+|+++||++++...|... ..+..++.+.|+.|+++|. ||+
T Consensus 13 ~~~~~~~s~~~~~~~~~~v~~P~~~----~~~~~P~vvllHG~~~~~~~~~~~---~~~~~la~~~g~~Vv~Pd~~~~g~ 85 (275)
T TIGR02821 13 QGFYRHKSETCGVPMTFGVFLPPQA----AAGPVPVLWYLSGLTCTHENFMIK---AGAQRFAAEHGLALVAPDTSPRGT 85 (275)
T ss_pred EEEEEEeccccCCceEEEEEcCCCc----cCCCCCEEEEccCCCCCccHHHhh---hHHHHHHhhcCcEEEEeCCCCCcC
Confidence 344555554 3455555544 4432 123579999999999999888432 1233445567999999998 666
Q ss_pred CCCCCCCCCC--CCccccc---------ccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhh
Q 035617 145 RFSRRHTSLD--PSQMEFW---------NWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDK 212 (422)
Q Consensus 145 G~S~~~~~~~--~~~~~~~---------~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~ 212 (422)
|.+.....-. ....-|+ .+++.+...+|+..+++.... .+ ++++++||||||.+++.++.++| +.
T Consensus 86 ~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p--~~ 162 (275)
T TIGR02821 86 GIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNP--DR 162 (275)
T ss_pred CCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCc--cc
Confidence 6443110000 0000000 223334333444443332110 23 78999999999999999998776 78
Q ss_pred Hhheeeecchhh
Q 035617 213 LKSAALLSPIAY 224 (422)
Q Consensus 213 v~~~v~~~p~~~ 224 (422)
++++++++|...
T Consensus 163 ~~~~~~~~~~~~ 174 (275)
T TIGR02821 163 FKSVSAFAPIVA 174 (275)
T ss_pred ceEEEEECCccC
Confidence 999999998753
No 77
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.64 E-value=9.1e-15 Score=139.64 Aligned_cols=281 Identities=14% Similarity=0.062 Sum_probs=156.6
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
.|+||++--+.++.... .+++.+.|.+ |++||+.|+..-+....... .|++++++ +-+..+++.
T Consensus 102 ~~pvLiV~Pl~g~~~~L-----~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~---------~f~ldDYi-~~l~~~i~~ 165 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATL-----LRSTVEALLP-DHDVYITDWVNARMVPLSAG---------KFDLEDYI-DYLIEFIRF 165 (406)
T ss_pred CCcEEEEcCCchHHHHH-----HHHHHHHHhC-CCcEEEEeCCCCCCCchhcC---------CCCHHHHH-HHHHHHHHH
Confidence 48999999998666554 4899999999 99999999998774321111 77889988 455555554
Q ss_pred HHHHhCCeEEEEEeChhHHHHHHHHhcc---chhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHh--------
Q 035617 180 VYEQTGQKIHYVGHSLGTLIALASFSEG---LQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLL-------- 248 (422)
Q Consensus 180 i~~~~~~~i~l~G~S~Gg~~a~~~~~~~---~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 248 (422)
+ |.+++++|+||||..++.+++.. ..+.+++++++++++.+..........+.....++.+....
T Consensus 166 ~----G~~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~ 241 (406)
T TIGR01849 166 L----GPDIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPY 241 (406)
T ss_pred h----CCCCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccc
Confidence 4 73399999999999988766653 22247999999998777654444444443333333222221
Q ss_pred -cCc-cccCCChhHHHHHHHhccCCc--cchhhhhhhhc-CCCCCC-CchhhhhhhhcCCCcchHHHHHHHH-HHHhcCC
Q 035617 249 -GLA-EFNPKGKPVADFLKSLCTNPV--VNCYDLLTSLT-GRNCCL-NSSTVDLFLRNEPQSTSTKNMVHLA-QTVRDGV 321 (422)
Q Consensus 249 -g~~-~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~ 321 (422)
|.. ..+|...... .+. ...... ....+++..+. |..... +-.....++.... ..+-+.+.++. ..+....
T Consensus 242 ~g~gr~v~PG~~~~~-~F~-~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~-dlpge~y~~~v~~vf~~n~ 318 (406)
T TIGR01849 242 PGAGRLVYPGFLQLA-GFI-SMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVM-DMTAEFYLQTIDVVFQQFL 318 (406)
T ss_pred cCCCCcccCHHHHHH-HHH-HcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhcc-CCcHHHHHHHHHHHHHhCC
Confidence 001 0222211110 010 111100 01111222221 221111 0010111111111 11122222222 2222211
Q ss_pred eeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccc
Q 035617 322 IAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLS 398 (422)
Q Consensus 322 ~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~ 398 (422)
+.. ..+..-+ -..++++|+ ++|+|.+.|++|.++++. +.+.+.+ .+-....++.+..+++ |..
T Consensus 319 L~~-------G~l~v~G----~~Vdl~~I~-~~pll~V~ge~D~I~p~~qt~aa~~l~--~~~~s~~k~~~~~~~~GH~G 384 (406)
T TIGR01849 319 LPQ-------GKFIVEG----KRVDPGAIT-RVALLTVEGENDDISGLGQTKAALRLC--TGIPEDMKRHHLQPGVGHYG 384 (406)
T ss_pred ccC-------CcEEECC----EEecHHHCc-ccceEEEeccCCCcCCHHHhHHHHHHh--hcCChhhceEeecCCCCeEE
Confidence 110 0000001 112678887 599999999999999999 6666664 3222234667778788 999
Q ss_pred cc---cCchhHHHHHHHHHhhh
Q 035617 399 FQ---VSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 399 ~~---~~~~~v~~~i~~fl~~~ 417 (422)
.+ ..+++++..|.+||.++
T Consensus 385 vf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 385 VFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred EeeChhhhhhhchHHHHHHHhC
Confidence 98 77889999999999864
No 78
>PRK11460 putative hydrolase; Provisional
Probab=99.63 E-value=8.7e-15 Score=132.18 Aligned_cols=115 Identities=14% Similarity=0.099 Sum_probs=72.8
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCC---C--CCCcccccccChHHHHhch
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTS---L--DPSQMEFWNWSWDELVAYD 172 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~---~--~~~~~~~~~~~~~~~~~~D 172 (422)
..+|+||++||++++...| ..++..|.+.++++..++.+|...+..... . .........-.+.+.. .+
T Consensus 14 ~~~~~vIlLHG~G~~~~~~------~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~-~~ 86 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAM------GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIM-PT 86 (232)
T ss_pred CCCcEEEEEeCCCCChHHH------HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHH-HH
Confidence 4578999999999999997 668888988887778888887643211000 0 0000000000111111 34
Q ss_pred HHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecc
Q 035617 173 LPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 173 ~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
+.+.++++.++.+ ++|+++||||||.+++.++..++ +.+.+++++++
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~--~~~~~vv~~sg 136 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEP--GLAGRVIAFSG 136 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCC--CcceEEEEecc
Confidence 4455666655654 68999999999999999887655 45666665553
No 79
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.62 E-value=4e-14 Score=131.91 Aligned_cols=281 Identities=15% Similarity=0.155 Sum_probs=169.6
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
.-++|+|++|-+-.....|..+.. .+++.+|.++|++|+++++++-..+.+ ..+++++..+++...+
T Consensus 105 v~~~PlLiVpP~iNk~yi~Dl~~~-~s~V~~l~~~g~~vfvIsw~nPd~~~~------------~~~~edYi~e~l~~ai 171 (445)
T COG3243 105 VLKRPLLIVPPWINKFYILDLSPE-KSLVRWLLEQGLDVFVISWRNPDASLA------------AKNLEDYILEGLSEAI 171 (445)
T ss_pred cCCCceEeeccccCceeEEeCCCC-ccHHHHHHHcCCceEEEeccCchHhhh------------hccHHHHHHHHHHHHH
Confidence 357899999999888888877654 899999999999999999999766654 4588999999999999
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhh-hHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccC
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVD-KLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNP 255 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~-~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p 255 (422)
+.+.+.++ ++|.++|+|+||++...+++..+ . +|++++++....+...... +..+.....+..+........++|
T Consensus 172 d~v~~itg~~~InliGyCvGGtl~~~ala~~~--~k~I~S~T~lts~~DF~~~g~-l~if~n~~~~~~~~~~i~~~g~lp 248 (445)
T COG3243 172 DTVKDITGQKDINLIGYCVGGTLLAAALALMA--AKRIKSLTLLTSPVDFSHAGD-LGIFANEATIEALDADIVQKGILP 248 (445)
T ss_pred HHHHHHhCccccceeeEecchHHHHHHHHhhh--hcccccceeeecchhhccccc-cccccCHHHHHHHHhhhhhccCCC
Confidence 99999999 99999999999999998888654 4 5999998876554332111 000000000111111121222444
Q ss_pred CChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHH-HHhcCCeeeecCCCCCccc
Q 035617 256 KGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQ-TVRDGVIAKFNYGRPDYNL 334 (422)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 334 (422)
... ......+.+....++..+.+............ +..|.... ...+-.....+++ .+..+.+.. +. +
T Consensus 249 g~~--ma~~F~mLrpndliw~~fV~nyl~ge~pl~fd-llyWn~ds-t~~~~~~~~~~Lrn~y~~N~l~~---g~----~ 317 (445)
T COG3243 249 GWY--MAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFD-LLYWNADS-TRLPGAAHSEYLRNFYLENRLIR---GG----L 317 (445)
T ss_pred hHH--HHHHHHhcCccccchHHHHHHhcCCCCCCchh-HHHhhCCC-ccCchHHHHHHHHHHHHhChhhc---cc----e
Confidence 332 22233444555556665554444333222222 22222221 1122223333332 222222211 00 0
Q ss_pred cccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCCccccc-cCch----hHH
Q 035617 335 MHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSKSLSFQ-VSPQ----LKM 407 (422)
Q Consensus 335 ~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~H~~~~-~~~~----~v~ 407 (422)
+.-+ -..++.+|+ ||++++.|++|.++|.+ ....+.+ ++ ++++...+.+|...+ ..|. ..+
T Consensus 318 ~v~G----~~VdL~~It--~pvy~~a~~~DhI~P~~Sv~~g~~l~--~g----~~~f~l~~sGHIa~vVN~p~~~k~~~w 385 (445)
T COG3243 318 EVSG----TMVDLGDIT--CPVYNLAAEEDHIAPWSSVYLGARLL--GG----EVTFVLSRSGHIAGVVNPPGNAKYQYW 385 (445)
T ss_pred EECC----EEechhhcc--cceEEEeecccccCCHHHHHHHHHhc--CC----ceEEEEecCceEEEEeCCcchhhhhcC
Confidence 0000 123788998 99999999999999999 5555555 44 477776655598776 2121 223
Q ss_pred H----HHHHHHhhh
Q 035617 408 I----AVMALFQRQ 417 (422)
Q Consensus 408 ~----~i~~fl~~~ 417 (422)
. .+.+|+...
T Consensus 386 ~n~~~~~~~Wl~~a 399 (445)
T COG3243 386 TNLPADAEAWLSGA 399 (445)
T ss_pred CCCcchHHHHHHhh
Confidence 3 566676553
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.62 E-value=1.3e-14 Score=129.45 Aligned_cols=116 Identities=14% Similarity=0.037 Sum_probs=83.3
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCC-CCCCCcccccccChHHHHhchHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHT-SLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
.+.|+||++||.+++...+... ..+...+.+.||.|+++|+||++.+.... ...+... ........|+..+
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~---~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 82 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVID---WGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHR-----ARGTGEVESLHQL 82 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhh---cChHHHHHhCCeEEEecCCcCccccCCCCCCCCcccc-----CCCCccHHHHHHH
Confidence 4579999999999887776421 24666777789999999999998543210 0000000 0001123678889
Q ss_pred HHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 177 FDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 177 i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
++++.++.+ ++++|+||||||.+++.++..++ +.+++++.+++..
T Consensus 83 i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~~~~~g~~ 130 (212)
T TIGR01840 83 IDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYP--DVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCc--hhheEEEeecCCc
Confidence 999988765 68999999999999999988776 7899998888654
No 81
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.62 E-value=2.5e-15 Score=134.78 Aligned_cols=190 Identities=19% Similarity=0.170 Sum_probs=121.3
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccC---hHHHHhchHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWS---WDELVAYDLP 174 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~---~~~~~~~D~~ 174 (422)
+++|.||++|+..+-... .+.+++.|+++||.|+++|+-+-.... ..........+..- ..+....|+.
T Consensus 12 ~~~~~Vvv~~d~~G~~~~------~~~~ad~lA~~Gy~v~~pD~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPN------IRDLADRLAEEGYVVLAPDLFGGRGAP--PSDPEEAFAAMRELFAPRPEQVAADLQ 83 (218)
T ss_dssp SSEEEEEEE-BTTBS-HH------HHHHHHHHHHTT-EEEEE-CCCCTS----CCCHHCHHHHHHHCHHHSHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchH------HHHHHHHHHhcCCCEEecccccCCCCC--ccchhhHHHHHHHHHhhhHHHHHHHHH
Confidence 468999999998775533 367999999999999999976533300 00001111111100 1233458889
Q ss_pred HHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCc
Q 035617 175 AVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLA 251 (422)
Q Consensus 175 ~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 251 (422)
++++++.++.. ++|.++|+|+||.+++.++... ..+++.+..-|..... .+
T Consensus 84 aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~---~~~~a~v~~yg~~~~~---~~-------------------- 137 (218)
T PF01738_consen 84 AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD---PRVDAAVSFYGGSPPP---PP-------------------- 137 (218)
T ss_dssp HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT---TTSSEEEEES-SSSGG---GH--------------------
T ss_pred HHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc---cccceEEEEcCCCCCC---cc--------------------
Confidence 99999988873 8999999999999999988765 3788888776610000 00
Q ss_pred cccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCC
Q 035617 252 EFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPD 331 (422)
Q Consensus 252 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (422)
T Consensus 138 -------------------------------------------------------------------------------- 137 (218)
T PF01738_consen 138 -------------------------------------------------------------------------------- 137 (218)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc--------
Q 035617 332 YNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ-------- 400 (422)
Q Consensus 332 ~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~-------- 400 (422)
.....+++ +|+++++|++|+.++++ +.+.+.+ ..++ ...+++.+|++ |--..
T Consensus 138 ------------~~~~~~~~--~P~l~~~g~~D~~~~~~~~~~~~~~l--~~~~-~~~~~~~y~ga~HgF~~~~~~~~~~ 200 (218)
T PF01738_consen 138 ------------LEDAPKIK--APVLILFGENDPFFPPEEVEALEEAL--KAAG-VDVEVHVYPGAGHGFANPSRPPYDP 200 (218)
T ss_dssp ------------HHHGGG----S-EEEEEETT-TTS-HHHHHHHHHHH--HCTT-TTEEEEEETT--TTTTSTTSTT--H
T ss_pred ------------hhhhcccC--CCEeecCccCCCCCChHHHHHHHHHH--HhcC-CcEEEEECCCCcccccCCCCcccCH
Confidence 00122333 89999999999999998 7777777 4432 46899999999 97665
Q ss_pred cCchhHHHHHHHHHhhhc
Q 035617 401 VSPQLKMIAVMALFQRQA 418 (422)
Q Consensus 401 ~~~~~v~~~i~~fl~~~~ 418 (422)
+..++.++.+++||++++
T Consensus 201 ~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 201 AAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 233467788999999875
No 82
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.61 E-value=5.4e-15 Score=126.26 Aligned_cols=264 Identities=18% Similarity=0.159 Sum_probs=157.6
Q ss_pred EEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCC
Q 035617 72 IDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHT 151 (422)
Q Consensus 72 ~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~ 151 (422)
..+...||+.+...++|... +.+--+++-|..+-...+ ++.+|..++++||.|.++|+||.|.|+...
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-------~~~g~~~va~a~Gv~~~f-----YRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~ 75 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-------KASGRLVVAGATGVGQYF-----YRRFAAAAAKAGFEVLTFDYRGIGQSRPAS 75 (281)
T ss_pred cccccCCCccCccccccCCC-------CCCCcEEecccCCcchhH-----hHHHHHHhhccCceEEEEecccccCCCccc
Confidence 56888999999999998874 233334444444444444 588999999999999999999999997532
Q ss_pred CCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhh
Q 035617 152 SLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRT 230 (422)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~ 230 (422)
.. . ..+.+.+++..|++++++.+.+..+ .+.+.+|||+||.+.-.+.. ++ ++.+.......+.......
T Consensus 76 ~~----~--~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~---k~~a~~vfG~gagwsg~m~ 145 (281)
T COG4757 76 LS----G--SQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP---KYAAFAVFGSGAGWSGWMG 145 (281)
T ss_pred cc----c--CccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc---ccceeeEeccccccccchh
Confidence 21 1 1678899999999999999988888 89999999999998766543 32 4555554444333221110
Q ss_pred HHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHH
Q 035617 231 ALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNM 310 (422)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~ 310 (422)
.... ...+.-- .-....++.+.. ...+.+--.....+...+
T Consensus 146 ~~~~---------------l~~~~l~-------------------~lv~p~lt~w~g-----~~p~~l~G~G~d~p~~v~ 186 (281)
T COG4757 146 LRER---------------LGAVLLW-------------------NLVGPPLTFWKG-----YMPKDLLGLGSDLPGTVM 186 (281)
T ss_pred hhhc---------------ccceeec-------------------cccccchhhccc-----cCcHhhcCCCccCcchHH
Confidence 0000 0000000 000000000000 000011111112333445
Q ss_pred HHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCcee
Q 035617 311 VHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLN 388 (422)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~ 388 (422)
..|....+... |.+-.+. +..|.+ ..+++. +|+..+...+|+++|+. +.+.+-. +| ...+
T Consensus 187 RdW~RwcR~p~---y~fddp~--~~~~~q------~yaaVr--tPi~~~~~~DD~w~P~As~d~f~~~y--~n---Apl~ 248 (281)
T COG4757 187 RDWARWCRHPR---YYFDDPA--MRNYRQ------VYAAVR--TPITFSRALDDPWAPPASRDAFASFY--RN---APLE 248 (281)
T ss_pred HHHHHHhcCcc---ccccChh--HhHHHH------HHHHhc--CceeeeccCCCCcCCHHHHHHHHHhh--hc---Cccc
Confidence 55555555321 1111110 000100 234555 89999999999999999 7787777 76 2344
Q ss_pred eEEcCC----C-ccccccCc-hhHHHHHHHHH
Q 035617 389 LICVMS----K-SLSFQVSP-QLKMIAVMALF 414 (422)
Q Consensus 389 ~~~i~~----~-H~~~~~~~-~~v~~~i~~fl 414 (422)
...++. - |+....++ |..++.+++|+
T Consensus 249 ~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 249 MRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred ceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 444432 3 88888666 89999999886
No 83
>PRK10162 acetyl esterase; Provisional
Probab=99.60 E-value=1e-13 Score=131.33 Aligned_cols=128 Identities=20% Similarity=0.131 Sum_probs=88.6
Q ss_pred eeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCC---CCcccccCCCCCCHHHHHHh-CCCeEEEeCCCC
Q 035617 68 KCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLV---DGLTWLLNPPEQNLPLILAD-HGFDVWIANTRG 143 (422)
Q Consensus 68 ~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~---~~~~~~~~~~~~~l~~~l~~-~g~~v~~~d~rG 143 (422)
..+++.+.+.+|. +.+..+.+.. .+.|+||++||.+. +...| ..++..|+. .|+.|+.+|||.
T Consensus 56 ~~~~~~i~~~~g~-i~~~~y~P~~------~~~p~vv~~HGGg~~~g~~~~~------~~~~~~la~~~g~~Vv~vdYrl 122 (318)
T PRK10162 56 ATRAYMVPTPYGQ-VETRLYYPQP------DSQATLFYLHGGGFILGNLDTH------DRIMRLLASYSGCTVIGIDYTL 122 (318)
T ss_pred eEEEEEEecCCCc-eEEEEECCCC------CCCCEEEEEeCCcccCCCchhh------hHHHHHHHHHcCCEEEEecCCC
Confidence 3577888888884 5555443332 23689999999763 33343 456677776 599999999997
Q ss_pred CCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHH---hC---CeEEEEEeChhHHHHHHHHhccc--h--hhhH
Q 035617 144 TRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQ---TG---QKIHYVGHSLGTLIALASFSEGL--Q--VDKL 213 (422)
Q Consensus 144 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~---~~---~~i~l~G~S~Gg~~a~~~~~~~~--~--~~~v 213 (422)
.... +. | . ..+|+.++++|+.+. .+ ++|+++|+|+||.+++.++.... . +.++
T Consensus 123 ape~---~~--p-----------~-~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~ 185 (318)
T PRK10162 123 SPEA---RF--P-----------Q-AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKV 185 (318)
T ss_pred CCCC---CC--C-----------C-cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccCh
Confidence 5322 11 1 1 237788889998754 33 68999999999999998776421 0 1478
Q ss_pred hheeeecchhhc
Q 035617 214 KSAALLSPIAYL 225 (422)
Q Consensus 214 ~~~v~~~p~~~~ 225 (422)
+++++++|....
T Consensus 186 ~~~vl~~p~~~~ 197 (318)
T PRK10162 186 AGVLLWYGLYGL 197 (318)
T ss_pred hheEEECCccCC
Confidence 999999987654
No 84
>PRK10115 protease 2; Provisional
Probab=99.59 E-value=7.6e-14 Score=144.44 Aligned_cols=147 Identities=14% Similarity=0.112 Sum_probs=104.3
Q ss_pred cCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC
Q 035617 65 HGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGT 144 (422)
Q Consensus 65 ~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~ 144 (422)
..+.+|.+.+++.||..+.++.+..+... ..++.|+||+.||..+.+.... .......|+++||.|+.+|.||.
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~--~~~~~P~ll~~hGg~~~~~~p~----f~~~~~~l~~rG~~v~~~n~RGs 485 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHF--RKGHNPLLVYGYGSYGASIDAD----FSFSRLSLLDRGFVYAIVHVRGG 485 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCC--CCCCCCEEEEEECCCCCCCCCC----ccHHHHHHHHCCcEEEEEEcCCC
Confidence 35678999999999999998665432211 1245699999999887775432 13345568889999999999997
Q ss_pred CCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecc
Q 035617 145 RFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 145 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
|.=.+. .... . .+.......+|+.++++++.++.- +++.+.|.|.||.++..++.++| ++++++|+..|
T Consensus 486 ~g~G~~-w~~~---g--~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~P--dlf~A~v~~vp 557 (686)
T PRK10115 486 GELGQQ-WYED---G--KFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRP--ELFHGVIAQVP 557 (686)
T ss_pred CccCHH-HHHh---h--hhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcCh--hheeEEEecCC
Confidence 633210 0000 0 001111234788899999987742 78999999999999999988776 89999999998
Q ss_pred hhhc
Q 035617 222 IAYL 225 (422)
Q Consensus 222 ~~~~ 225 (422)
+..+
T Consensus 558 ~~D~ 561 (686)
T PRK10115 558 FVDV 561 (686)
T ss_pred chhH
Confidence 7643
No 85
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.59 E-value=1.4e-14 Score=122.42 Aligned_cols=107 Identities=19% Similarity=0.139 Sum_probs=79.4
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
+...|||+||+.++...-. ...+|..|++.|+.++.+|++|.|.|.+.-... .|.. ..+|+..+++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~----~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G-------n~~~---eadDL~sV~q 97 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAII----MKNVAKALEKEGISAFRFDFSGNGESEGSFYYG-------NYNT---EADDLHSVIQ 97 (269)
T ss_pred CceEEEEeeccccccchHH----HHHHHHHHHhcCceEEEEEecCCCCcCCccccC-------cccc---hHHHHHHHHH
Confidence 4679999999988776532 367899999999999999999999998732111 2222 3399999999
Q ss_pred HHHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 179 HVYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 179 ~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
++....-.--+++|||-||-+++.++++.. .++-+|-++.-
T Consensus 98 ~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~---d~~~viNcsGR 138 (269)
T KOG4667|consen 98 YFSNSNRVVPVILGHSKGGDVVLLYASKYH---DIRNVINCSGR 138 (269)
T ss_pred HhccCceEEEEEEeecCccHHHHHHHHhhc---CchheEEcccc
Confidence 995422123468999999999999999654 36666666543
No 86
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.57 E-value=3.1e-14 Score=118.60 Aligned_cols=130 Identities=22% Similarity=0.158 Sum_probs=93.4
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR 149 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~ 149 (422)
+++.+...-| .+...+.+.+. ...|..|.+|--+.-...-.... -..+++.|.++||.++.+|+||-|.|.+
T Consensus 5 ~~v~i~Gp~G-~le~~~~~~~~------~~~~iAli~HPHPl~gGtm~nkv-v~~la~~l~~~G~atlRfNfRgVG~S~G 76 (210)
T COG2945 5 PTVIINGPAG-RLEGRYEPAKT------PAAPIALICHPHPLFGGTMNNKV-VQTLARALVKRGFATLRFNFRGVGRSQG 76 (210)
T ss_pred CcEEecCCcc-cceeccCCCCC------CCCceEEecCCCccccCccCCHH-HHHHHHHHHhCCceEEeecccccccccC
Confidence 3455555555 45666666553 45788999987655444421111 2578888999999999999999999987
Q ss_pred CCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeE-EEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 150 HTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKI-HYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i-~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
.= +..+.| .+|..++++|++.+.. .+. .+.|+|+|+.+++.+|.+.+ .+...+..+|.
T Consensus 77 ~f----------D~GiGE--~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~---e~~~~is~~p~ 136 (210)
T COG2945 77 EF----------DNGIGE--LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRP---EILVFISILPP 136 (210)
T ss_pred cc----------cCCcch--HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcc---cccceeeccCC
Confidence 21 444555 4799999999999887 554 78999999999999988765 45566655554
No 87
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=2.1e-13 Score=122.80 Aligned_cols=212 Identities=17% Similarity=0.154 Sum_probs=146.3
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCC-CCCCC
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRG-TRFSR 148 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG-~G~S~ 148 (422)
+.+.+.++| ..+..+...+.. . .+.|.||++|+..+-... .+..++.|+++||.|+++|+-+ .|.+.
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~----~-~~~P~VIv~hei~Gl~~~------i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~ 70 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAG----A-GGFPGVIVLHEIFGLNPH------IRDVARRLAKAGYVVLAPDLYGRQGDPT 70 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCc----C-CCCCEEEEEecccCCchH------HHHHHHHHHhCCcEEEechhhccCCCCC
Confidence 456778877 455555544432 1 234999999998776665 4899999999999999999877 34333
Q ss_pred CCCCCCCCccc---ccccChHHHHhchHHHHHHHHHHHh-C--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 149 RHTSLDPSQME---FWNWSWDELVAYDLPAVFDHVYEQT-G--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 149 ~~~~~~~~~~~---~~~~~~~~~~~~D~~~~i~~i~~~~-~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
.... .+.... +-..+..+ ...|+.+.++|+..+. . ++|.++|+||||.+++.++...+ .|++.++.-|.
T Consensus 71 ~~~~-~~~~~~~~~~~~~~~~~-~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~---~v~a~v~fyg~ 145 (236)
T COG0412 71 DIED-EPAELETGLVERVDPAE-VLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP---EVKAAVAFYGG 145 (236)
T ss_pred cccc-cHHHHhhhhhccCCHHH-HHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC---CccEEEEecCC
Confidence 2221 010000 00123344 4489999999998777 2 78999999999999999998664 68888866543
Q ss_pred hhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCC
Q 035617 223 AYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEP 302 (422)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 302 (422)
.....
T Consensus 146 ~~~~~--------------------------------------------------------------------------- 150 (236)
T COG0412 146 LIADD--------------------------------------------------------------------------- 150 (236)
T ss_pred CCCCc---------------------------------------------------------------------------
Confidence 21000
Q ss_pred CcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhccc
Q 035617 303 QSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLF 380 (422)
Q Consensus 303 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~ 380 (422)
. ....+++ +|+|+.+|+.|..+|.. +.+.+.+ .
T Consensus 151 -------------------------~----------------~~~~~~~--~pvl~~~~~~D~~~p~~~~~~~~~~~--~ 185 (236)
T COG0412 151 -------------------------T----------------ADAPKIK--VPVLLHLAGEDPYIPAADVDALAAAL--E 185 (236)
T ss_pred -------------------------c----------------ccccccc--CcEEEEecccCCCCChhHHHHHHHHH--H
Confidence 0 0123454 99999999999999999 7777777 5
Q ss_pred CCCCCceeeEEcCCC-cccccc-----------CchhHHHHHHHHHhhhcC
Q 035617 381 SKSGESLNLICVMSK-SLSFQV-----------SPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 381 ~~~~~~~~~~~i~~~-H~~~~~-----------~~~~v~~~i~~fl~~~~~ 419 (422)
.+. ..+++.+++++ |.-+.+ ..+.-++.+++|+++++.
T Consensus 186 ~~~-~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 186 DAG-VKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred hcC-CCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 421 24778899999 977632 245778899999998764
No 88
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.52 E-value=7.1e-13 Score=120.45 Aligned_cols=101 Identities=28% Similarity=0.439 Sum_probs=73.0
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADH--GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~--g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
.|+|+++||+.++...|.. ....+... .|+|+++|+||||.|. .. .++.... ..|+..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~g~g~s~-~~----------~~~~~~~-~~~~~~-- 80 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRP------VFKVLPALAARYRVIAPDLRGHGRSD-PA----------GYSLSAY-ADDLAA-- 80 (282)
T ss_pred CCeEEEeCCCCCchhhhHH------HHHHhhccccceEEEEecccCCCCCC-cc----------cccHHHH-HHHHHH--
Confidence 4599999999999999854 11112221 1999999999999997 00 1122222 244444
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
+.+..+ .++.++||||||.+++.++.+.| +++++++++++...
T Consensus 81 --~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p--~~~~~~v~~~~~~~ 124 (282)
T COG0596 81 --LLDALGLEKVVLVGHSMGGAVALALALRHP--DRVRGLVLIGPAPP 124 (282)
T ss_pred --HHHHhCCCceEEEEecccHHHHHHHHHhcc--hhhheeeEecCCCC
Confidence 444557 77999999999999999999776 78999999997653
No 89
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.52 E-value=2.8e-12 Score=118.41 Aligned_cols=278 Identities=19% Similarity=0.150 Sum_probs=153.0
Q ss_pred CCCcEEEecCCCCCCcccccC-CCCCCHHHHHHhCC-------CeEEEeCCCCCC-CCCCCCCCCCCc----ccccccCh
Q 035617 99 KRPPVLIQHGVLVDGLTWLLN-PPEQNLPLILADHG-------FDVWIANTRGTR-FSRRHTSLDPSQ----MEFWNWSW 165 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~-~~~~~l~~~l~~~g-------~~v~~~d~rG~G-~S~~~~~~~~~~----~~~~~~~~ 165 (422)
...+||++||+.+++...... .+...|-+.+..-| |-|++.|..|.. .|.++.+..+.. ..|-.+++
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 457999999999976653211 01113444444334 889999999966 777766655551 23334566
Q ss_pred HHHHhchHHHHHHHHHHHhC-CeEE-EEEeChhHHHHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHH
Q 035617 166 DELVAYDLPAVFDHVYEQTG-QKIH-YVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGE 243 (422)
Q Consensus 166 ~~~~~~D~~~~i~~i~~~~~-~~i~-l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 243 (422)
.+++ .+-..+++.+| +++. ++|-||||+.++.++..+| ++|+.++.++.........-.+......
T Consensus 130 ~D~V-----~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yP--d~V~~~i~ia~~~r~s~~~ia~~~~~r~----- 197 (368)
T COG2021 130 RDMV-----RAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYP--DRVRRAIPIATAARLSAQNIAFNEVQRQ----- 197 (368)
T ss_pred HHHH-----HHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhCh--HHHhhhheecccccCCHHHHHHHHHHHH-----
Confidence 6666 33455667779 8887 9999999999999999666 9999999999865444332222222111
Q ss_pred HHHHhcCccc---------cCCCh-hHHHHHHHhccCCccchhhhhhhhcCCCC---CC----CchhhhhhhhcCCC---
Q 035617 244 ITTLLGLAEF---------NPKGK-PVADFLKSLCTNPVVNCYDLLTSLTGRNC---CL----NSSTVDLFLRNEPQ--- 303 (422)
Q Consensus 244 ~~~~~g~~~~---------~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~----~~~~~~~~~~~~~~--- 303 (422)
....-..| .|... ...+.+..+... ....+..-++... .. ....++.|+.+...
T Consensus 198 --AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYr----S~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~ 271 (368)
T COG2021 198 --AIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYR----SEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFV 271 (368)
T ss_pred --HHHhCCCccCCCccCCCCcchhHHHHHHHHHHHcc----CHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHH
Confidence 11111111 12221 112222222211 1111111112110 00 01122223222110
Q ss_pred -cchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhccc
Q 035617 304 -STSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLF 380 (422)
Q Consensus 304 -~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~ 380 (422)
......+...... ...||-.... ....-.+++|+ +|+|++.=+.|.+.|++ +++.+.+ +
T Consensus 272 ~rfDaNsYL~lt~a-----ld~~D~s~~~---------~~l~~al~~i~--~~~lv~gi~sD~lfp~~~~~~~~~~L--~ 333 (368)
T COG2021 272 ARFDANSYLYLTRA-----LDYHDVSRGR---------GDLTAALARIK--APVLVVGITSDWLFPPELQRALAEAL--P 333 (368)
T ss_pred hccCcchHHHHHHH-----HHhcCCCCCc---------CcHHHHHhcCc--cCEEEEEecccccCCHHHHHHHHHhc--c
Confidence 0001111111111 1123322210 00112477888 99999999999999999 8899999 7
Q ss_pred CCCCCceeeEEcC-CC-ccccccCchhHHHHHHHHHhh
Q 035617 381 SKSGESLNLICVM-SK-SLSFQVSPQLKMIAVMALFQR 416 (422)
Q Consensus 381 ~~~~~~~~~~~i~-~~-H~~~~~~~~~v~~~i~~fl~~ 416 (422)
.++ . +++++ .. |..|+...+.+.+.|..||+.
T Consensus 334 ~~~---~-~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 334 AAG---A-LREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ccC---c-eEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 722 2 55554 45 999997778888999999975
No 90
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.50 E-value=4.2e-12 Score=112.99 Aligned_cols=132 Identities=18% Similarity=0.225 Sum_probs=98.3
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR 149 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~ 149 (422)
..+.+.+++|...++...-..... ...+.++||=+||-+++..+| +.+...|.+.|.+++..|++|+|.+.+
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~~--~gs~~gTVv~~hGsPGSH~DF------kYi~~~l~~~~iR~I~iN~PGf~~t~~ 78 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSLP--SGSPLGTVVAFHGSPGSHNDF------KYIRPPLDEAGIRFIGINYPGFGFTPG 78 (297)
T ss_pred EEEEcccccCceEEEEEEEEecCC--CCCCceeEEEecCCCCCccch------hhhhhHHHHcCeEEEEeCCCCCCCCCC
Confidence 345667778866665433221100 223466999999999999997 667777999999999999999999987
Q ss_pred CCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 150 HTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
.+.. .|+-.|.. ..++.+++..+ +++.++|||.|+-.|+.+++.+| ..++++++|.+...
T Consensus 79 ~~~~--------~~~n~er~-----~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 79 YPDQ--------QYTNEERQ-----NFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPGLRP 140 (297)
T ss_pred Cccc--------ccChHHHH-----HHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc----cceEEEecCCcccc
Confidence 5432 33434433 56666777778 89999999999999999999775 67999999986543
No 91
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.48 E-value=1.8e-13 Score=139.36 Aligned_cols=130 Identities=20% Similarity=0.170 Sum_probs=97.7
Q ss_pred EECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcc-cccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCC
Q 035617 74 VTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLT-WLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTS 152 (422)
Q Consensus 74 v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~ 152 (422)
|++.||..|.+..+.+.. ..+.|+||++||++.+... +.. ....+..|+++||.|+++|+||+|.|++...
T Consensus 1 i~~~DG~~L~~~~~~P~~-----~~~~P~Il~~~gyg~~~~~~~~~---~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~ 72 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG-----GGPVPVILSRTPYGKDAGLRWGL---DKTEPAWFVAQGYAVVIQDTRGRGASEGEFD 72 (550)
T ss_pred CcCCCCCEEEEEEEecCC-----CCCCCEEEEecCCCCchhhcccc---ccccHHHHHhCCcEEEEEeccccccCCCceE
Confidence 457899999876554432 1367999999999876531 100 2345667889999999999999999987432
Q ss_pred CCCCcccccccChHHHHhchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 153 LDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
.++ .. ..+|+.++++++.++.- .+|.++|||+||.+++.+|..++ .++++++..++...
T Consensus 73 ---------~~~-~~-~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~--~~l~aiv~~~~~~d 133 (550)
T TIGR00976 73 ---------LLG-SD-EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQP--PALRAIAPQEGVWD 133 (550)
T ss_pred ---------ecC-cc-cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCC--CceeEEeecCcccc
Confidence 112 12 34899999999977633 79999999999999999988765 68999998887653
No 92
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.46 E-value=4.1e-13 Score=125.03 Aligned_cols=151 Identities=19% Similarity=0.192 Sum_probs=95.2
Q ss_pred hhcCceeeEEEEECCCCcEEEEEEe-eCCCCCCCCCCCCCcEEEecCCCCCCcccc------------cCCCCCCHHHHH
Q 035617 63 IIHGYKCQEIDVTTKDGYILNLQRI-PEGRAAGGGQIKRPPVLIQHGVLVDGLTWL------------LNPPEQNLPLIL 129 (422)
Q Consensus 63 ~~~~~~~e~~~v~t~dG~~l~~~~~-~~~~~~~~~~~~~~~vll~HG~~~~~~~~~------------~~~~~~~l~~~l 129 (422)
+.-||..|.+.+.+.++..+..+.+ |.+ ...+-|+||++||-++..+.-. ..-+....+..|
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~-----~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~L 156 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDG-----AKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQL 156 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT-------S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHH
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCC-----CCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHH
Confidence 4568999999999999988887754 554 2356799999999876543210 011235679999
Q ss_pred HhCCCeEEEeCCCCCCCCCCCCCCCCCcc----------cccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChh
Q 035617 130 ADHGFDVWIANTRGTRFSRRHTSLDPSQM----------EFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLG 196 (422)
Q Consensus 130 ~~~g~~v~~~d~rG~G~S~~~~~~~~~~~----------~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~G 196 (422)
+++||-|+++|.+|+|............. ....+|+.-+...|...++||+..... ++|.++|+|||
T Consensus 157 Ak~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmG 236 (390)
T PF12715_consen 157 AKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMG 236 (390)
T ss_dssp HTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGG
T ss_pred HhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeeccc
Confidence 99999999999999997654321111100 002345666666888889999977665 78999999999
Q ss_pred HHHHHHHHhccchhhhHhheeeecc
Q 035617 197 TLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 197 g~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
|..++.+++..+ +|++.|+.+-
T Consensus 237 g~~a~~LaALDd---RIka~v~~~~ 258 (390)
T PF12715_consen 237 GYRAWWLAALDD---RIKATVANGY 258 (390)
T ss_dssp HHHHHHHHHH-T---T--EEEEES-
T ss_pred HHHHHHHHHcch---hhHhHhhhhh
Confidence 999999988764 8988887664
No 93
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.45 E-value=9.1e-13 Score=117.89 Aligned_cols=57 Identities=5% Similarity=0.094 Sum_probs=43.0
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhhh
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~ 417 (422)
+|++++||++|.++|.+ +...+.+ .+.+. +++++.+++. |... .+..+.+.+||+++
T Consensus 156 ~pi~~~hG~~D~vvp~~~~~~~~~~L--~~~~~-~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 156 TPILIIHGDEDPVVPFEWAEKTAEFL--KAAGA-NVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp S-EEEEEETT-SSSTHHHHHHHHHHH--HCTT--GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcccHHHHHHHHHHH--HhcCC-CEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 79999999999999998 8888888 54332 6899999988 9764 56788899999875
No 94
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=99.44 E-value=3.6e-13 Score=93.41 Aligned_cols=61 Identities=49% Similarity=0.940 Sum_probs=42.9
Q ss_pred hhhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccC
Q 035617 59 ASSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLN 119 (422)
Q Consensus 59 ~~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~ 119 (422)
.++++.+||++|++.|+|+||+.|.++|++.++.......++|+|+|.||+.+++..|..+
T Consensus 2 ~~~i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv~n 62 (63)
T PF04083_consen 2 PELIEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWVLN 62 (63)
T ss_dssp HHHHHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGCSS
T ss_pred HHHHHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHHcC
Confidence 4789999999999999999999999999998864333556789999999999999999754
No 95
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.43 E-value=9.7e-12 Score=107.53 Aligned_cols=130 Identities=16% Similarity=0.163 Sum_probs=82.3
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC-CCCC
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGT-RFSR 148 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~-G~S~ 148 (422)
-++.+..+||..+.+|..++... ...++++||+..|++.....+ ..+|++|+.+||+|+-+|.-.| |.|.
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~---~~~~~~tiliA~Gf~rrmdh~------agLA~YL~~NGFhViRyDsl~HvGlSs 73 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNN---EPKRNNTILIAPGFARRMDHF------AGLAEYLSANGFHVIRYDSLNHVGLSS 73 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TT---S---S-EEEEE-TT-GGGGGG------HHHHHHHHTTT--EEEE---B------
T ss_pred ccceeEcCCCCEEEEeccCCCCC---CcccCCeEEEecchhHHHHHH------HHHHHHHhhCCeEEEeccccccccCCC
Confidence 35678889999999998877653 334569999999999998885 8999999999999999998887 8898
Q ss_pred CCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 149 RHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
|... +|++.... +|+..++||+. ..| .++.|+.-|+-|-+|...+++. .+.-+|..-.+.
T Consensus 74 G~I~---------eftms~g~-~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVV 134 (294)
T PF02273_consen 74 GDIN---------EFTMSIGK-ASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVV 134 (294)
T ss_dssp ----------------HHHHH-HHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S
T ss_pred CChh---------hcchHHhH-HHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeee
Confidence 8654 77887744 99999999997 556 8999999999999999998843 255555444443
No 96
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.43 E-value=2.4e-13 Score=125.75 Aligned_cols=109 Identities=21% Similarity=0.287 Sum_probs=81.1
Q ss_pred CCCCcEEEecCCCCCC-cccccCCCCCCHHHHH-HhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHH
Q 035617 98 IKRPPVLIQHGVLVDG-LTWLLNPPEQNLPLIL-ADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPA 175 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~-~~~~~~~~~~~l~~~l-~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 175 (422)
.++|+||++||+.++. ..|. ..++..+ ...+|+|+++|++|++.+..... ..+....+ +|+..
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~-----~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a---------~~~~~~v~-~~la~ 98 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWI-----SDLRKAYLSRGDYNVIVVDWGRGANPNYPQA---------VNNTRVVG-AELAK 98 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHH-----HHHHHHHHhcCCCEEEEEECccccccChHHH---------HHhHHHHH-HHHHH
Confidence 4579999999999987 5662 4455444 44579999999999743211000 22344444 68889
Q ss_pred HHHHHHHHh--C-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 176 VFDHVYEQT--G-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 176 ~i~~i~~~~--~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
+++++.+.. + ++++++||||||.++..++...+ ++|++++++.|+.
T Consensus 99 ~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~--~~v~~iv~LDPa~ 147 (275)
T cd00707 99 FLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLN--GKLGRITGLDPAG 147 (275)
T ss_pred HHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhc--CccceeEEecCCc
Confidence 999998774 3 78999999999999999988655 6899999999875
No 97
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.43 E-value=5.7e-13 Score=128.80 Aligned_cols=111 Identities=20% Similarity=0.217 Sum_probs=82.1
Q ss_pred CCCCCcEEEecCCCCCC--cccccCCCCCCHHHHHHh--CCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhch
Q 035617 97 QIKRPPVLIQHGVLVDG--LTWLLNPPEQNLPLILAD--HGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYD 172 (422)
Q Consensus 97 ~~~~~~vll~HG~~~~~--~~~~~~~~~~~l~~~l~~--~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D 172 (422)
+..+|++|++||+.++. ..|. ..++..|.. ..|+|+++|++|+|.|...... . ....++ ++
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~-----~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~--------~-~t~~vg-~~ 102 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWV-----PKLVAALYEREPSANVIVVDWLSRAQQHYPTSA--------A-YTKLVG-KD 102 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhH-----HHHHHHHHhccCCCEEEEEECCCcCCCCCcccc--------c-cHHHHH-HH
Confidence 35679999999998754 3452 234444432 3699999999999987542210 1 223333 78
Q ss_pred HHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 173 LPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 173 ~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
+.++++++.+..+ ++++|+||||||.+|..++...+ ++|.+++++.|+..
T Consensus 103 la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p--~rV~rItgLDPAgP 155 (442)
T TIGR03230 103 VAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK--HKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC--cceeEEEEEcCCCC
Confidence 8899999876654 89999999999999999887665 78999999999753
No 98
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.41 E-value=4.2e-13 Score=98.72 Aligned_cols=78 Identities=26% Similarity=0.322 Sum_probs=63.6
Q ss_pred CcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcc
Q 035617 79 GYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQM 158 (422)
Q Consensus 79 G~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~ 158 (422)
|..|.+..+.+.+ +++.+|+++||+++++..| ..+++.|+++||.|+++|+||||.|.+.....+
T Consensus 1 G~~L~~~~w~p~~------~~k~~v~i~HG~~eh~~ry------~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~--- 65 (79)
T PF12146_consen 1 GTKLFYRRWKPEN------PPKAVVVIVHGFGEHSGRY------AHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHID--- 65 (79)
T ss_pred CcEEEEEEecCCC------CCCEEEEEeCCcHHHHHHH------HHHHHHHHhCCCEEEEECCCcCCCCCCcccccC---
Confidence 5678888887774 2689999999999999975 889999999999999999999999987544222
Q ss_pred cccccChHHHHhchHHHHH
Q 035617 159 EFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 159 ~~~~~~~~~~~~~D~~~~i 177 (422)
+++++. +|+..++
T Consensus 66 -----~~~~~v-~D~~~~~ 78 (79)
T PF12146_consen 66 -----SFDDYV-DDLHQFI 78 (79)
T ss_pred -----CHHHHH-HHHHHHh
Confidence 566766 7777765
No 99
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.38 E-value=2.1e-10 Score=102.08 Aligned_cols=282 Identities=17% Similarity=0.152 Sum_probs=177.5
Q ss_pred eeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcc-cccCCCCCCHHHHHHhCCCeEEEeCCCCCCC
Q 035617 68 KCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLT-WLLNPPEQNLPLILADHGFDVWIANTRGTRF 146 (422)
Q Consensus 68 ~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~ 146 (422)
.++++.|.|.-|. ++.......+ .++|++|=.|.++-+..+ |...+...+.+..+ ++ |-|+-+|.+||-.
T Consensus 21 ~~~e~~V~T~~G~-v~V~V~Gd~~------~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~-~~-fcv~HV~~PGqe~ 91 (326)
T KOG2931|consen 21 TCQEHDVETAHGV-VHVTVYGDPK------GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL-EH-FCVYHVDAPGQED 91 (326)
T ss_pred cceeeeecccccc-EEEEEecCCC------CCCceEEEecccccchHhHhHHhhcCHhHHHHH-hh-eEEEecCCCcccc
Confidence 3688999999884 4444443332 358899999999998877 54434334444444 54 9999999999853
Q ss_pred CCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 147 SRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 147 S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
... .. | .+|---|.++++ +|++.+++++ + +.+.-+|.--|+.+...+|..|| ++|-++||+++....
T Consensus 92 gAp--~~-p--~~y~yPsmd~LA-d~l~~VL~~f----~lk~vIg~GvGAGAyIL~rFAl~hp--~rV~GLvLIn~~~~a 159 (326)
T KOG2931|consen 92 GAP--SF-P--EGYPYPSMDDLA-DMLPEVLDHF----GLKSVIGMGVGAGAYILARFALNHP--ERVLGLVLINCDPCA 159 (326)
T ss_pred CCc--cC-C--CCCCCCCHHHHH-HHHHHHHHhc----CcceEEEecccccHHHHHHHHhcCh--hheeEEEEEecCCCC
Confidence 321 11 1 111111567766 7888877777 8 99999999999999999999887 999999999986544
Q ss_pred cchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCC-CCCCchhhhhhhhcCCCc
Q 035617 226 SYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRN-CCLNSSTVDLFLRNEPQS 304 (422)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~ 304 (422)
+.+... +...+.+.+....|.... ....++...+|.+ ..-+.+.++.|..+.-..
T Consensus 160 ~gwiew----~~~K~~s~~l~~~Gmt~~--------------------~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~ 215 (326)
T KOG2931|consen 160 KGWIEW----AYNKVSSNLLYYYGMTQG--------------------VKDYLLAHHFGKEELGNNSDIVQEYRQHLGER 215 (326)
T ss_pred chHHHH----HHHHHHHHHHHhhchhhh--------------------HHHHHHHHHhccccccccHHHHHHHHHHHHhc
Confidence 332221 222222222333333322 2223333344433 233556666666655554
Q ss_pred chHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChhHHHHHHhcccCCCC
Q 035617 305 TSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLTQYLLYLCKLFSKSG 384 (422)
Q Consensus 305 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~l~~~l~~~~~~~ 384 (422)
...+++..++..+..++-....... ..... +||+|++.|++.+-+....++..++ ..
T Consensus 216 ~N~~Nl~~fl~ayn~R~DL~~~r~~----------------~~~tl--kc~vllvvGd~Sp~~~~vv~~n~~L--dp--- 272 (326)
T KOG2931|consen 216 LNPKNLALFLNAYNGRRDLSIERPK----------------LGTTL--KCPVLLVVGDNSPHVSAVVECNSKL--DP--- 272 (326)
T ss_pred CChhHHHHHHHHhcCCCCccccCCC----------------cCccc--cccEEEEecCCCchhhhhhhhhccc--Cc---
Confidence 4555666555555533211111000 01122 4999999999988776555555555 33
Q ss_pred CceeeEEcCCC-ccccccCchhHHHHHHHHHhhh
Q 035617 385 ESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 385 ~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~ 417 (422)
....+..+.++ -+...++|.++.+.+.=|++-.
T Consensus 273 ~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 273 TYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred ccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 35778889899 8888899999999999998753
No 100
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=6.1e-12 Score=109.82 Aligned_cols=220 Identities=10% Similarity=0.072 Sum_probs=130.1
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..++-++++|=.++++..| +.|...|.. -..+++++++|.|.-.+.+. ..|+.++.
T Consensus 5 ~~~~~L~cfP~AGGsa~~f------r~W~~~lp~-~iel~avqlPGR~~r~~ep~-----------------~~di~~La 60 (244)
T COG3208 5 GARLRLFCFPHAGGSASLF------RSWSRRLPA-DIELLAVQLPGRGDRFGEPL-----------------LTDIESLA 60 (244)
T ss_pred CCCceEEEecCCCCCHHHH------HHHHhhCCc-hhheeeecCCCcccccCCcc-----------------cccHHHHH
Confidence 3467888898888888886 666666754 59999999999986544322 25555555
Q ss_pred HHHHHHhC-----CeEEEEEeChhHHHHHHHHhccchhh-hHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCc
Q 035617 178 DHVYEQTG-----QKIHYVGHSLGTLIALASFSEGLQVD-KLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLA 251 (422)
Q Consensus 178 ~~i~~~~~-----~~i~l~G~S~Gg~~a~~~~~~~~~~~-~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 251 (422)
|.+..+.. .+..+.||||||++|+..|.+-.... ...++.+.+..+-.......+.......++..+...-|..
T Consensus 61 d~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p 140 (244)
T COG3208 61 DELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTP 140 (244)
T ss_pred HHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCC
Confidence 55554432 68999999999999999887532111 3455555543221111111111111111222222222222
Q ss_pred -cccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcC--CeeeecCC
Q 035617 252 -EFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDG--VIAKFNYG 328 (422)
Q Consensus 252 -~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~ 328 (422)
+++. |++.... ++-.++++ ....|.+.
T Consensus 141 ~e~le----------------------------------d~El~~l----------------~LPilRAD~~~~e~Y~~~ 170 (244)
T COG3208 141 PELLE----------------------------------DPELMAL----------------FLPILRADFRALESYRYP 170 (244)
T ss_pred hHHhc----------------------------------CHHHHHH----------------HHHHHHHHHHHhcccccC
Confidence 1111 1111111 11111110 00112222
Q ss_pred CCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCCccccccCchhH
Q 035617 329 RPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSKSLSFQVSPQLK 406 (422)
Q Consensus 329 ~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~H~~~~~~~~~v 406 (422)
. -..+. ||+..+.|++|..+..+ ..+.+.. ++ ..+++.++|+|+-..++.+++
T Consensus 171 ~-----------------~~pl~--~pi~~~~G~~D~~vs~~~~~~W~~~t--~~----~f~l~~fdGgHFfl~~~~~~v 225 (244)
T COG3208 171 P-----------------PAPLA--CPIHAFGGEKDHEVSRDELGAWREHT--KG----DFTLRVFDGGHFFLNQQREEV 225 (244)
T ss_pred C-----------------CCCcC--cceEEeccCcchhccHHHHHHHHHhh--cC----CceEEEecCcceehhhhHHHH
Confidence 1 12333 99999999999999998 6688887 54 588999988899988999999
Q ss_pred HHHHHHHHhh
Q 035617 407 MIAVMALFQR 416 (422)
Q Consensus 407 ~~~i~~fl~~ 416 (422)
.+.|.+.+..
T Consensus 226 ~~~i~~~l~~ 235 (244)
T COG3208 226 LARLEQHLAH 235 (244)
T ss_pred HHHHHHHhhh
Confidence 9999988863
No 101
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.33 E-value=7.1e-11 Score=106.54 Aligned_cols=274 Identities=16% Similarity=0.117 Sum_probs=153.0
Q ss_pred EEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcc-cccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC
Q 035617 71 EIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLT-WLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR 149 (422)
Q Consensus 71 ~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~ 149 (422)
++.++|.-| .+++......+ ..+|++|=.|-.+-+..+ |...+.. .-...+.+ .|.|+-+|.+||..-..
T Consensus 1 eh~v~t~~G-~v~V~v~G~~~------~~kp~ilT~HDvGlNh~scF~~ff~~-~~m~~i~~-~f~i~Hi~aPGqe~ga~ 71 (283)
T PF03096_consen 1 EHDVETPYG-SVHVTVQGDPK------GNKPAILTYHDVGLNHKSCFQGFFNF-EDMQEILQ-NFCIYHIDAPGQEEGAA 71 (283)
T ss_dssp -EEEEETTE-EEEEEEESS--------TTS-EEEEE--TT--HHHHCHHHHCS-HHHHHHHT-TSEEEEEE-TTTSTT--
T ss_pred CceeccCce-EEEEEEEecCC------CCCceEEEeccccccchHHHHHHhcc-hhHHHHhh-ceEEEEEeCCCCCCCcc
Confidence 367888888 45554444332 368999999999988776 4332222 22333444 69999999999975432
Q ss_pred CCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhccch
Q 035617 150 HTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLSYM 228 (422)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~ 228 (422)
.. |. +|---|+++++ +++..+++++ + +.++-+|--.|+.+...+|..+| ++|.++|+++|......+
T Consensus 72 ~~---p~--~y~yPsmd~LA-e~l~~Vl~~f----~lk~vIg~GvGAGAnIL~rfAl~~p--~~V~GLiLvn~~~~~~gw 139 (283)
T PF03096_consen 72 TL---PE--GYQYPSMDQLA-EMLPEVLDHF----GLKSVIGFGVGAGANILARFALKHP--ERVLGLILVNPTCTAAGW 139 (283)
T ss_dssp ------T--T-----HHHHH-CTHHHHHHHH----T---EEEEEETHHHHHHHHHHHHSG--GGEEEEEEES---S---H
T ss_pred cc---cc--cccccCHHHHH-HHHHHHHHhC----CccEEEEEeeccchhhhhhccccCc--cceeEEEEEecCCCCccH
Confidence 11 11 11112678877 8888877777 9 99999999999999999999777 899999999997655433
Q ss_pred hhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCC-CCCCchhhhhhhhcCCCcchH
Q 035617 229 RTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRN-CCLNSSTVDLFLRNEPQSTST 307 (422)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~s~ 307 (422)
......... .......|..... .+.++...+|.. ...+.+.++.+..+.......
T Consensus 140 ~Ew~~~K~~----~~~L~~~gmt~~~--------------------~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np 195 (283)
T PF03096_consen 140 MEWFYQKLS----SWLLYSYGMTSSV--------------------KDYLLWHYFGKEEEENNSDLVQTYRQHLDERINP 195 (283)
T ss_dssp HHHHHHHHH-----------CTTS-H--------------------HHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTH
T ss_pred HHHHHHHHh----cccccccccccch--------------------HHhhhhcccccccccccHHHHHHHHHHHhcCCCH
Confidence 222211111 1111122222221 112222222322 112444555555544444555
Q ss_pred HHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChhHHHHHHhcccCCCCCce
Q 035617 308 KNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLTQYLLYLCKLFSKSGESL 387 (422)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~l~~~l~~~~~~~~~~ 387 (422)
+++..+.+.+.+++-. ....+... ||+|++.|++.+..+...++..++ .. ...
T Consensus 196 ~Nl~~f~~sy~~R~DL--------------------~~~~~~~~--c~vLlvvG~~Sp~~~~vv~~ns~L--dp---~~t 248 (283)
T PF03096_consen 196 KNLALFLNSYNSRTDL--------------------SIERPSLG--CPVLLVVGDNSPHVDDVVEMNSKL--DP---TKT 248 (283)
T ss_dssp HHHHHHHHHHHT-------------------------SECTTCC--S-EEEEEETTSTTHHHHHHHHHHS---C---CCE
T ss_pred HHHHHHHHHHhccccc--------------------hhhcCCCC--CCeEEEEecCCcchhhHHHHHhhc--Cc---ccc
Confidence 6777777777643211 01233333 999999999998765557788887 44 358
Q ss_pred eeEEcCCC-ccccccCchhHHHHHHHHHhh
Q 035617 388 NLICVMSK-SLSFQVSPQLKMIAVMALFQR 416 (422)
Q Consensus 388 ~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~ 416 (422)
.+..++++ =++..|+|.++.+.+.=||+-
T Consensus 249 tllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 249 TLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp EEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred eEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 89999999 999999999999999999875
No 102
>COG0400 Predicted esterase [General function prediction only]
Probab=99.30 E-value=6.4e-11 Score=103.47 Aligned_cols=112 Identities=20% Similarity=0.220 Sum_probs=64.9
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC-CCCCCCCcccccccChHHHHhchHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR-HTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
+..|+||++||++++..++.. ++..+.- .+.++. .||-=.-.+ .....-.+.. .|+.++.. .+...+
T Consensus 16 p~~~~iilLHG~Ggde~~~~~------~~~~~~P-~~~~is--~rG~v~~~g~~~~f~~~~~~--~~d~edl~-~~~~~~ 83 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVP------LPELILP-NATLVS--PRGPVAENGGPRFFRRYDEG--SFDQEDLD-LETEKL 83 (207)
T ss_pred CCCcEEEEEecCCCChhhhhh------hhhhcCC-CCeEEc--CCCCccccCcccceeecCCC--ccchhhHH-HHHHHH
Confidence 456789999999988887632 3344433 234333 333211000 0000000000 22333322 334444
Q ss_pred HHHH---HHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 177 FDHV---YEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 177 i~~i---~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
.+++ .++.+ ++++++|+|.||++++..+...+ +.++++++++|..
T Consensus 84 ~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~--~~~~~ail~~g~~ 134 (207)
T COG0400 84 AEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLP--GLFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCc--hhhccchhcCCcC
Confidence 4444 44455 79999999999999999988766 7899999888753
No 103
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.29 E-value=5.8e-11 Score=123.92 Aligned_cols=88 Identities=20% Similarity=0.210 Sum_probs=69.8
Q ss_pred CHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHH--------------h---CC
Q 035617 124 NLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQ--------------T---GQ 186 (422)
Q Consensus 124 ~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~--------------~---~~ 186 (422)
.+.++|+.+||.|+..|.||+|.|+|... .+... ..+|..++|+|+..+ . +.
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~---------~~~~~--E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG 338 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT---------TGDYQ--EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNG 338 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc---------cCCHH--HHHHHHHHHHHHhhCCccccccccccccccCCCCC
Confidence 56688999999999999999999998432 11222 358999999999842 1 27
Q ss_pred eEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 187 KIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 187 ~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
+|.++|.|+||.+++.+|+..+ ..++++|..++...
T Consensus 339 kVGm~G~SY~G~~~~~aAa~~p--p~LkAIVp~a~is~ 374 (767)
T PRK05371 339 KVAMTGKSYLGTLPNAVATTGV--EGLETIIPEAAISS 374 (767)
T ss_pred eeEEEEEcHHHHHHHHHHhhCC--CcceEEEeeCCCCc
Confidence 9999999999999998888654 57999998887643
No 104
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.29 E-value=1.3e-11 Score=126.55 Aligned_cols=129 Identities=17% Similarity=0.185 Sum_probs=90.7
Q ss_pred EEEEECCCCcEEEEEEeeCCCC-CCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC
Q 035617 71 EIDVTTKDGYILNLQRIPEGRA-AGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR 149 (422)
Q Consensus 71 ~~~v~t~dG~~l~~~~~~~~~~-~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~ 149 (422)
...+.+.+|..+.+.+...+.. -.......|+||++||+.++...| ..++..|+++||+|+++|+||||.|..
T Consensus 419 p~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~------~~lA~~La~~Gy~VIaiDlpGHG~S~~ 492 (792)
T TIGR03502 419 PVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENA------LAFAGTLAAAGVATIAIDHPLHGARSF 492 (792)
T ss_pred ceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHH------HHHHHHHHhCCcEEEEeCCCCCCcccc
Confidence 3467777887776665433310 000112357999999999999998 678888998999999999999999944
Q ss_pred CCCCC------CCcccccc--------cChHHHHhchHHHHHHHHH------HH------hC-CeEEEEEeChhHHHHHH
Q 035617 150 HTSLD------PSQMEFWN--------WSWDELVAYDLPAVFDHVY------EQ------TG-QKIHYVGHSLGTLIALA 202 (422)
Q Consensus 150 ~~~~~------~~~~~~~~--------~~~~~~~~~D~~~~i~~i~------~~------~~-~~i~l~G~S~Gg~~a~~ 202 (422)
..... ...-.|.+ .++++.+ .|+..+...+. +. .+ .+++++||||||.++..
T Consensus 493 ~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v-~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~ 571 (792)
T TIGR03502 493 DANASGVNATNANVLAYMNLASLLVARDNLRQSI-LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTS 571 (792)
T ss_pred ccccccccccccCccceeccccccccccCHHHHH-HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHH
Confidence 21111 01111222 2677766 89999988886 22 33 79999999999999999
Q ss_pred HHhc
Q 035617 203 SFSE 206 (422)
Q Consensus 203 ~~~~ 206 (422)
++..
T Consensus 572 ~~~~ 575 (792)
T TIGR03502 572 FIAY 575 (792)
T ss_pred HHHh
Confidence 8875
No 105
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.29 E-value=1.1e-11 Score=115.04 Aligned_cols=132 Identities=20% Similarity=0.122 Sum_probs=87.9
Q ss_pred CCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCC-cccccCCC---CCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCC
Q 035617 78 DGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDG-LTWLLNPP---EQNLPLILADHGFDVWIANTRGTRFSRRHTSL 153 (422)
Q Consensus 78 dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~-~~~~~~~~---~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~ 153 (422)
||..|....+.+.. ....+.|+||..|+++.+. ........ .......|+++||.|+..|.||.|.|++....
T Consensus 1 DGv~L~adv~~P~~---~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~ 77 (272)
T PF02129_consen 1 DGVRLAADVYRPGA---DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP 77 (272)
T ss_dssp TS-EEEEEEEEE-----TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T
T ss_pred CCCEEEEEEEecCC---CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc
Confidence 78888876554411 0335679999999998654 11111000 01122338899999999999999999984321
Q ss_pred CCCcccccccChHHHHhchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 154 DPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
. ......|..++|+|+.++.- .+|.++|.|++|.+++.+|+..+ ..+++++..++....
T Consensus 78 ---------~--~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~--p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 78 ---------M--SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRP--PHLKAIVPQSGWSDL 138 (272)
T ss_dssp ---------T--SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT---TTEEEEEEESE-SBT
T ss_pred ---------C--ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCC--CCceEEEecccCCcc
Confidence 1 23345899999999988733 79999999999999999988544 589999988876544
No 106
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.25 E-value=2.1e-11 Score=111.08 Aligned_cols=111 Identities=21% Similarity=0.232 Sum_probs=71.8
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCC----CCCCCCCCCCCCCcccccccChHHHHhchHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRG----TRFSRRHTSLDPSQMEFWNWSWDELVAYDLP 174 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG----~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~ 174 (422)
.+..|||+.|+++.-..- .....+++.|...||.|+-+.++- +|.+ +++. -.+||.
T Consensus 32 ~~~~llfIGGLtDGl~tv---pY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~----------------SL~~-D~~eI~ 91 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTV---PYLPDLAEALEETGWSLFQVQLSSSYSGWGTS----------------SLDR-DVEEIA 91 (303)
T ss_dssp SSSEEEEE--TT--TT-S---TCHHHHHHHHT-TT-EEEEE--GGGBTTS-S------------------HHH-HHHHHH
T ss_pred CCcEEEEECCCCCCCCCC---chHHHHHHHhccCCeEEEEEEecCccCCcCcc----------------hhhh-HHHHHH
Confidence 456899999998865541 112578888977899999997664 3322 3333 248999
Q ss_pred HHHHHHHHHh----C-CeEEEEEeChhHHHHHHHHhccch---hhhHhheeeecchhhccchh
Q 035617 175 AVFDHVYEQT----G-QKIHYVGHSLGTLIALASFSEGLQ---VDKLKSAALLSPIAYLSYMR 229 (422)
Q Consensus 175 ~~i~~i~~~~----~-~~i~l~G~S~Gg~~a~~~~~~~~~---~~~v~~~v~~~p~~~~~~~~ 229 (422)
++|+|++... + ++|+|+|||.|+.-++.|+..... ...|+++|+-+|+.......
T Consensus 92 ~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~ 154 (303)
T PF08538_consen 92 QLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAIL 154 (303)
T ss_dssp HHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTT
T ss_pred HHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhh
Confidence 9999999883 5 899999999999999999887432 24799999999997665443
No 107
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=2.5e-10 Score=118.89 Aligned_cols=256 Identities=14% Similarity=0.087 Sum_probs=158.4
Q ss_pred hhhhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHH-HHhCCCeE
Q 035617 58 CASSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLI-LADHGFDV 136 (422)
Q Consensus 58 ~~~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~-l~~~g~~v 136 (422)
..+.+....+|..+..-..-||....+..+-++... ..++-|.++.+||.+++... .-.. ..++... ....|+.|
T Consensus 486 ~~~~~~~~~~p~~~~~~i~~~~~~~~~~~~lP~~~~--~~~kyPllv~~yGGP~sq~v-~~~~-~~~~~~~~~s~~g~~v 561 (755)
T KOG2100|consen 486 LKKTIENVALPIVEFGKIEIDGITANAILILPPNFD--PSKKYPLLVVVYGGPGSQSV-TSKF-SVDWNEVVVSSRGFAV 561 (755)
T ss_pred hHHHhhcccCCcceeEEEEeccEEEEEEEecCCCCC--CCCCCCEEEEecCCCCccee-eeeE-EecHHHHhhccCCeEE
Confidence 444555455554333222228888877766554321 22355888888999873322 1111 2455555 55779999
Q ss_pred EEeCCCCCCCCCCC-CCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhh
Q 035617 137 WIANTRGTRFSRRH-TSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDK 212 (422)
Q Consensus 137 ~~~d~rG~G~S~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~ 212 (422)
+.+|.||.|..... ....+. .+.+....|...++.++.+..- .+|.++|+|.||.+++..+..++ .+.
T Consensus 562 ~~vd~RGs~~~G~~~~~~~~~-------~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~-~~~ 633 (755)
T KOG2100|consen 562 LQVDGRGSGGYGWDFRSALPR-------NLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP-GDV 633 (755)
T ss_pred EEEcCCCcCCcchhHHHHhhh-------hcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc-Cce
Confidence 99999998865431 111110 1222234677778888776653 78999999999999999988664 135
Q ss_pred HhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhhhhhhcCCCCCCCch
Q 035617 213 LKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDLLTSLTGRNCCLNSS 292 (422)
Q Consensus 213 v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 292 (422)
+++.++++|+.......+- .. .+.+|...
T Consensus 634 fkcgvavaPVtd~~~yds~-~t----------erymg~p~---------------------------------------- 662 (755)
T KOG2100|consen 634 FKCGVAVAPVTDWLYYDST-YT----------ERYMGLPS---------------------------------------- 662 (755)
T ss_pred EEEEEEecceeeeeeeccc-cc----------HhhcCCCc----------------------------------------
Confidence 6777999998765411100 00 00000000
Q ss_pred hhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccE-EEEEeCCCccCChh-
Q 035617 293 TVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPL-FVSYGGNDALADLT- 370 (422)
Q Consensus 293 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pv-lii~G~~D~~v~~~- 370 (422)
.|...| ....+...+.+++ .|. |++||+.|.-|+.+
T Consensus 663 ---------------------------------------~~~~~y-~e~~~~~~~~~~~--~~~~LliHGt~DdnVh~q~ 700 (755)
T KOG2100|consen 663 ---------------------------------------ENDKGY-EESSVSSPANNIK--TPKLLLIHGTEDDNVHFQQ 700 (755)
T ss_pred ---------------------------------------cccchh-hhccccchhhhhc--cCCEEEEEcCCcCCcCHHH
Confidence 000000 0011222455565 455 99999999999988
Q ss_pred -HHHHHHhcccCCCCCceeeEEcCCC-ccccc-cCchhHHHHHHHHHhhhcCcC
Q 035617 371 -QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ-VSPQLKMIAVMALFQRQASMT 421 (422)
Q Consensus 371 -~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~-~~~~~v~~~i~~fl~~~~~~~ 421 (422)
..+.+.| ..++.. .+++++|+. |.... +.-..++..+..|++.+...+
T Consensus 701 s~~~~~aL--~~~gv~-~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 701 SAILIKAL--QNAGVP-FRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred HHHHHHHH--HHCCCc-eEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCcc
Confidence 8889898 665554 899999999 98877 555788999999999765543
No 108
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.21 E-value=2.3e-10 Score=101.92 Aligned_cols=103 Identities=22% Similarity=0.177 Sum_probs=71.3
Q ss_pred EEEecCCCCCCcccccCCCCCCHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHH
Q 035617 103 VLIQHGVLVDGLTWLLNPPEQNLPLILAD-HGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVY 181 (422)
Q Consensus 103 vll~HG~~~~~~~~~~~~~~~~l~~~l~~-~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~ 181 (422)
||++||.+-....-.. ...++..+++ .|+.|+.+|||=.- +.++.+.. +|+.++++|+.
T Consensus 1 v~~~HGGg~~~g~~~~---~~~~~~~la~~~g~~v~~~~Yrl~p----------------~~~~p~~~-~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES---HWPFAARLAAERGFVVVSIDYRLAP----------------EAPFPAAL-EDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTT---HHHHHHHHHHHHTSEEEEEE---TT----------------TSSTTHHH-HHHHHHHHHHH
T ss_pred CEEECCcccccCChHH---HHHHHHHHHhhccEEEEEeeccccc----------------cccccccc-cccccceeeec
Confidence 7999998765443211 2445666664 89999999999431 22444544 89999999999
Q ss_pred HH-----hC-CeEEEEEeChhHHHHHHHHhccchh--hhHhheeeecchhhc
Q 035617 182 EQ-----TG-QKIHYVGHSLGTLIALASFSEGLQV--DKLKSAALLSPIAYL 225 (422)
Q Consensus 182 ~~-----~~-~~i~l~G~S~Gg~~a~~~~~~~~~~--~~v~~~v~~~p~~~~ 225 (422)
+. .+ ++|+++|+|-||.+++.++...... ..++++++++|....
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 98 34 8999999999999999988753211 258999999997644
No 109
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.21 E-value=2.9e-10 Score=101.81 Aligned_cols=103 Identities=24% Similarity=0.246 Sum_probs=77.6
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..-|+|||+||+. ....| |..+.+.++..||-|+.+|+...+.... -. ..+++.+++
T Consensus 15 g~yPVv~f~~G~~-~~~s~-----Ys~ll~hvAShGyIVV~~d~~~~~~~~~---------------~~--~~~~~~~vi 71 (259)
T PF12740_consen 15 GTYPVVLFLHGFL-LINSW-----YSQLLEHVASHGYIVVAPDLYSIGGPDD---------------TD--EVASAAEVI 71 (259)
T ss_pred CCcCEEEEeCCcC-CCHHH-----HHHHHHHHHhCceEEEEecccccCCCCc---------------ch--hHHHHHHHH
Confidence 4579999999999 45555 5889999999999999999776432111 00 125667888
Q ss_pred HHHHHHh----------C-CeEEEEEeChhHHHHHHHHhccc---hhhhHhheeeecchh
Q 035617 178 DHVYEQT----------G-QKIHYVGHSLGTLIALASFSEGL---QVDKLKSAALLSPIA 223 (422)
Q Consensus 178 ~~i~~~~----------~-~~i~l~G~S~Gg~~a~~~~~~~~---~~~~v~~~v~~~p~~ 223 (422)
+|+.+.. + .++.|.|||-||-+++.++..+. ...++++++++.|+.
T Consensus 72 ~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 72 DWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 8876643 2 58999999999999998877651 124799999999986
No 110
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.19 E-value=7.1e-10 Score=95.71 Aligned_cols=89 Identities=21% Similarity=0.248 Sum_probs=59.5
Q ss_pred EEEecCCCCCCcccccCCCCCCHHHHHHhCCC--eEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHH
Q 035617 103 VLIQHGVLVDGLTWLLNPPEQNLPLILADHGF--DVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHV 180 (422)
Q Consensus 103 vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~--~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i 180 (422)
||++||+.++..+.- ...+.+++++.+. ++..+|++-+ | .++.+.++.+
T Consensus 2 ilYlHGF~Ssp~S~K----a~~l~~~~~~~~~~~~~~~p~l~~~----------p---------------~~a~~~l~~~ 52 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFK----AQALKQYFAEHGPDIQYPCPDLPPF----------P---------------EEAIAQLEQL 52 (187)
T ss_pred eEEecCCCCCCCCHH----HHHHHHHHHHhCCCceEECCCCCcC----------H---------------HHHHHHHHHH
Confidence 799999999887642 2456666777663 4566665531 1 2222334444
Q ss_pred HHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 181 YEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 181 ~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
.+... +.+.|+|.||||..|..++.+.. +++ |+++|+..+
T Consensus 53 i~~~~~~~~~liGSSlGG~~A~~La~~~~----~~a-vLiNPav~p 93 (187)
T PF05728_consen 53 IEELKPENVVLIGSSLGGFYATYLAERYG----LPA-VLINPAVRP 93 (187)
T ss_pred HHhCCCCCeEEEEEChHHHHHHHHHHHhC----CCE-EEEcCCCCH
Confidence 45545 66999999999999999887654 444 899998643
No 111
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.17 E-value=5e-10 Score=101.06 Aligned_cols=101 Identities=14% Similarity=0.115 Sum_probs=76.8
Q ss_pred CcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHH
Q 035617 101 PPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHV 180 (422)
Q Consensus 101 ~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i 180 (422)
++|+++||.+++...| ..|++.|...++.|+.++++|.+..... .-++++++. ..++.|
T Consensus 1 ~~lf~~p~~gG~~~~y------~~la~~l~~~~~~v~~i~~~~~~~~~~~-----------~~si~~la~----~y~~~I 59 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSY------RPLARALPDDVIGVYGIEYPGRGDDEPP-----------PDSIEELAS----RYAEAI 59 (229)
T ss_dssp -EEEEESSTTCSGGGG------HHHHHHHTTTEEEEEEECSTTSCTTSHE-----------ESSHHHHHH----HHHHHH
T ss_pred CeEEEEcCCccCHHHH------HHHHHhCCCCeEEEEEEecCCCCCCCCC-----------CCCHHHHHH----HHHHHh
Confidence 4799999999988885 8899999764589999999998722211 337788774 566667
Q ss_pred HHHhC-CeEEEEEeChhHHHHHHHHhccch-hhhHhheeeecch
Q 035617 181 YEQTG-QKIHYVGHSLGTLIALASFSEGLQ-VDKLKSAALLSPI 222 (422)
Q Consensus 181 ~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~-~~~v~~~v~~~p~ 222 (422)
++..+ .++.|+|||+||.+|+..|.+-.. ...+..++++.+.
T Consensus 60 ~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 60 RARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred hhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 66666 699999999999999998876321 1358888888843
No 112
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.17 E-value=1.6e-10 Score=99.03 Aligned_cols=167 Identities=15% Similarity=0.174 Sum_probs=111.0
Q ss_pred CCHHHHHHhCCCeEEEeCC-CCCCCCCCCCCCCCCccccc--ccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHH
Q 035617 123 QNLPLILADHGFDVWIANT-RGTRFSRRHTSLDPSQMEFW--NWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTL 198 (422)
Q Consensus 123 ~~l~~~l~~~g~~v~~~d~-rG~G~S~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~ 198 (422)
+..|+.++.+||.|+++|+ ||-=.| ++........| ..+..- ...|+.++++++..+.. .+|.++|+||||.
T Consensus 57 r~~Adk~A~~Gy~v~vPD~~~Gdp~~---~~~~~~~~~~w~~~~~~~~-~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak 132 (242)
T KOG3043|consen 57 REGADKVALNGYTVLVPDFFRGDPWS---PSLQKSERPEWMKGHSPPK-IWKDITAVVKWLKNHGDSKKIGVVGFCWGAK 132 (242)
T ss_pred HHHHHHHhcCCcEEEcchhhcCCCCC---CCCChhhhHHHHhcCCccc-chhHHHHHHHHHHHcCCcceeeEEEEeecce
Confidence 6788999999999999995 551111 11111111111 112222 33788899999985554 8999999999999
Q ss_pred HHHHHHhccchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCccccCCChhHHHHHHHhccCCccchhhh
Q 035617 199 IALASFSEGLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFNPKGKPVADFLKSLCTNPVVNCYDL 278 (422)
Q Consensus 199 ~a~~~~~~~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 278 (422)
++..+.+..+ .+.+.++.-|..
T Consensus 133 ~vv~~~~~~~---~f~a~v~~hps~------------------------------------------------------- 154 (242)
T KOG3043|consen 133 VVVTLSAKDP---EFDAGVSFHPSF------------------------------------------------------- 154 (242)
T ss_pred EEEEeeccch---hheeeeEecCCc-------------------------------------------------------
Confidence 9887766543 566666444321
Q ss_pred hhhhcCCCCCCCchhhhhhhhcCCCcchHHHHHHHHHHHhcCCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEE
Q 035617 279 LTSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFV 358 (422)
Q Consensus 279 ~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvli 358 (422)
.+ ..++.+++ +|||+
T Consensus 155 ----------~d-----------------------------------------------------~~D~~~vk--~Pilf 169 (242)
T KOG3043|consen 155 ----------VD-----------------------------------------------------SADIANVK--APILF 169 (242)
T ss_pred ----------CC-----------------------------------------------------hhHHhcCC--CCEEE
Confidence 00 00345555 99999
Q ss_pred EEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc-----------cCchhHHHHHHHHHhhhc
Q 035617 359 SYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ-----------VSPQLKMIAVMALFQRQA 418 (422)
Q Consensus 359 i~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~-----------~~~~~v~~~i~~fl~~~~ 418 (422)
+.|+.|.++|++ ..+.+.+ .++..-..+++++++- |--+. .+-++.++.+++|+++++
T Consensus 170 l~ae~D~~~p~~~v~~~ee~l--k~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 170 LFAELDEDVPPKDVKAWEEKL--KENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred EeecccccCCHHHHHHHHHHH--hcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 7777777 4421112578999998 86552 233577888999999875
No 113
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.14 E-value=1.5e-08 Score=92.77 Aligned_cols=121 Identities=18% Similarity=0.221 Sum_probs=89.6
Q ss_pred eeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCccccc-CCCCCCHHHHHHhCCCeEEEeCCCCCCCC
Q 035617 69 CQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLL-NPPEQNLPLILADHGFDVWIANTRGTRFS 147 (422)
Q Consensus 69 ~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~-~~~~~~l~~~l~~~g~~v~~~d~rG~G~S 147 (422)
..++.++. ||+.+....+..+. ..+...||++-|+++.-+.... ......+-+...+.|-+|+++||||.|.|
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~~-----a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S 185 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQPE-----AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSS 185 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCCC-----CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccC
Confidence 35555655 99999988886543 2467899999999887776221 11112344445566899999999999999
Q ss_pred CCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHh-C---CeEEEEEeChhHHHHHHHHhccc
Q 035617 148 RRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQT-G---QKIHYVGHSLGTLIALASFSEGL 208 (422)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~-~---~~i~l~G~S~Gg~~a~~~~~~~~ 208 (422)
++.. +..+++ .|..+.++|++++. | ++|.+.|||+||.++..++.++.
T Consensus 186 ~G~~------------s~~dLv-~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 186 TGPP------------SRKDLV-KDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CCCC------------CHHHHH-HHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 9854 335555 88999999998643 3 88999999999999998777653
No 114
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.10 E-value=1.9e-09 Score=94.55 Aligned_cols=105 Identities=24% Similarity=0.192 Sum_probs=79.7
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..-|.|+|+||+.-.... |..+...++.+||-|+++++-.-- . ++ ..+| .++...++
T Consensus 44 G~yPVilF~HG~~l~ns~------Ys~lL~HIASHGfIVVAPQl~~~~-~-------p~-------~~~E--i~~aa~V~ 100 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSF------YSQLLAHIASHGFIVVAPQLYTLF-P-------PD-------GQDE--IKSAASVI 100 (307)
T ss_pred CCccEEEEeechhhhhHH------HHHHHHHHhhcCeEEEechhhccc-C-------CC-------chHH--HHHHHHHH
Confidence 567999999999887555 478888899999999999987531 1 11 1112 25677899
Q ss_pred HHHHHHh----------C-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 178 DHVYEQT----------G-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 178 ~~i~~~~----------~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
||+.+.+ + .++.++|||.||-+|+++|..+...-+++++|.+.|+...
T Consensus 101 ~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 101 NWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 9998763 2 7899999999999999988865422378999999987644
No 115
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.09 E-value=2.7e-10 Score=97.28 Aligned_cols=87 Identities=28% Similarity=0.288 Sum_probs=56.9
Q ss_pred EEEecCCCCCCc-ccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHH
Q 035617 103 VLIQHGVLVDGL-TWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVY 181 (422)
Q Consensus 103 vll~HG~~~~~~-~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~ 181 (422)
|+++||+.++.. .|. .-+.+.|... ++|-..|+ .. -|+..+++.+.
T Consensus 1 v~IvhG~~~s~~~HW~-----~wl~~~l~~~-~~V~~~~~------~~---------------------P~~~~W~~~l~ 47 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQ-----PWLERQLENS-VRVEQPDW------DN---------------------PDLDEWVQALD 47 (171)
T ss_dssp EEEE--TTSSTTTSTH-----HHHHHHHTTS-EEEEEC--------TS-----------------------HHHHHHHHH
T ss_pred CEEeCCCCCCCccHHH-----HHHHHhCCCC-eEEecccc------CC---------------------CCHHHHHHHHH
Confidence 689999998755 573 4566667665 78888777 10 12335555565
Q ss_pred HHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 182 EQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 182 ~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
+..+ +++++||||+|+..++.+++. ....+|++++++||+.
T Consensus 48 ~~i~~~~~~~ilVaHSLGc~~~l~~l~~-~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 48 QAIDAIDEPTILVAHSLGCLTALRWLAE-QSQKKVAGALLVAPFD 91 (171)
T ss_dssp HCCHC-TTTEEEEEETHHHHHHHHHHHH-TCCSSEEEEEEES--S
T ss_pred HHHhhcCCCeEEEEeCHHHHHHHHHHhh-cccccccEEEEEcCCC
Confidence 5543 779999999999999999952 2226899999999974
No 116
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=4.6e-09 Score=102.26 Aligned_cols=142 Identities=18% Similarity=0.122 Sum_probs=96.3
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCC-----CCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLV-----DGLTWLLNPPEQNLPLILADHGFDVWIANTRGT 144 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~-----~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~ 144 (422)
|.+.+.+..|.++..-...+.+.. ..++-|+|+++-|.++ ++..|... --...|+..||-|+.+|.||.
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~--pgkkYptvl~VYGGP~VQlVnnsfkgi~y----lR~~~LaslGy~Vv~IDnRGS 687 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQ--PGKKYPTVLNVYGGPGVQLVNNSFKGIQY----LRFCRLASLGYVVVFIDNRGS 687 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCC--CCCCCceEEEEcCCCceEEeeccccceeh----hhhhhhhhcceEEEEEcCCCc
Confidence 456678877888877666554332 3355799999999887 33333221 112347889999999999996
Q ss_pred CCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC----CeEEEEEeChhHHHHHHHHhccchhhhHhheeeec
Q 035617 145 RFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG----QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLS 220 (422)
Q Consensus 145 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~----~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~ 220 (422)
-.-.. .. +............+|-...+.++.++.| ++|.+-|+|.||.+++..+.++| +-++.+|+=+
T Consensus 688 ~hRGl----kF--E~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P--~IfrvAIAGa 759 (867)
T KOG2281|consen 688 AHRGL----KF--ESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP--NIFRVAIAGA 759 (867)
T ss_pred cccch----hh--HHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc--ceeeEEeccC
Confidence 42211 00 0000112233334666788899999987 78999999999999999999777 7788888888
Q ss_pred chhhc
Q 035617 221 PIAYL 225 (422)
Q Consensus 221 p~~~~ 225 (422)
|+...
T Consensus 760 pVT~W 764 (867)
T KOG2281|consen 760 PVTDW 764 (867)
T ss_pred cceee
Confidence 87543
No 117
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.06 E-value=6.4e-09 Score=95.33 Aligned_cols=123 Identities=19% Similarity=0.243 Sum_probs=88.9
Q ss_pred EECC-CCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhC---C------CeEEEeCCCC
Q 035617 74 VTTK-DGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADH---G------FDVWIANTRG 143 (422)
Q Consensus 74 v~t~-dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~---g------~~v~~~d~rG 143 (422)
++|+ .|..++..+..+.+. .+.+.-.|+|++||++++...|+...| .|.+. | |.|+++..+|
T Consensus 127 ykTeIeGL~iHFlhvk~p~~--k~~k~v~PlLl~HGwPGsv~EFykfIP------lLT~p~~hg~~~d~~FEVI~PSlPG 198 (469)
T KOG2565|consen 127 YKTEIEGLKIHFLHVKPPQK--KKKKKVKPLLLLHGWPGSVREFYKFIP------LLTDPKRHGNESDYAFEVIAPSLPG 198 (469)
T ss_pred hhhhhcceeEEEEEecCCcc--ccCCcccceEEecCCCchHHHHHhhhh------hhcCccccCCccceeEEEeccCCCC
Confidence 3443 576666655544431 123344789999999999999854444 46554 3 7899999999
Q ss_pred CCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeee
Q 035617 144 TRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALL 219 (422)
Q Consensus 144 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~ 219 (422)
+|.|++... . .|+..+.+ .++.-+.=+.| ++.++-|-.+|..++..+|+..| +.|.++-+-
T Consensus 199 ygwSd~~sk-----~---GFn~~a~A-----rvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyP--enV~GlHln 260 (469)
T KOG2565|consen 199 YGWSDAPSK-----T---GFNAAATA-----RVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYP--ENVLGLHLN 260 (469)
T ss_pred cccCcCCcc-----C---CccHHHHH-----HHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcc--hhhhHhhhc
Confidence 999998433 2 44555544 67777777889 99999999999999999999766 778776543
No 118
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.03 E-value=4.4e-09 Score=96.74 Aligned_cols=114 Identities=18% Similarity=0.202 Sum_probs=83.9
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhC---CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADH---GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~---g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
+..|+++.|++|-.+.| ..+...|.+. .+.|++..+.||-.+....... .....|++++.+. --.+.
T Consensus 2 ~~li~~IPGNPGlv~fY------~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~---~~~~~~sL~~QI~-hk~~~ 71 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY------EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS---PNGRLFSLQDQIE-HKIDF 71 (266)
T ss_pred cEEEEEECCCCChHHHH------HHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc---CCCCccCHHHHHH-HHHHH
Confidence 57899999999988874 6777777754 7999999999998776542111 1122778888874 33344
Q ss_pred HHHHHHHh--C-CeEEEEEeChhHHHHHHHHhccc-hhhhHhheeeecchh
Q 035617 177 FDHVYEQT--G-QKIHYVGHSLGTLIALASFSEGL-QVDKLKSAALLSPIA 223 (422)
Q Consensus 177 i~~i~~~~--~-~~i~l~G~S~Gg~~a~~~~~~~~-~~~~v~~~v~~~p~~ 223 (422)
++.+.... . .+++++|||+|+.+++..+.+.+ ...+|++++++-|..
T Consensus 72 i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 72 IKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred HHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 44443432 4 78999999999999999998765 335899999999964
No 119
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.00 E-value=6.4e-09 Score=88.16 Aligned_cols=101 Identities=18% Similarity=0.179 Sum_probs=80.1
Q ss_pred cEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHH
Q 035617 102 PVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVY 181 (422)
Q Consensus 102 ~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~ 181 (422)
.+|++-|=++.... ...++..|+++|+.|+.+|-+-|=.+++ +-++.+ .|+..++++..
T Consensus 4 ~~v~~SGDgGw~~~------d~~~a~~l~~~G~~VvGvdsl~Yfw~~r--------------tP~~~a-~Dl~~~i~~y~ 62 (192)
T PF06057_consen 4 LAVFFSGDGGWRDL------DKQIAEALAKQGVPVVGVDSLRYFWSER--------------TPEQTA-ADLARIIRHYR 62 (192)
T ss_pred EEEEEeCCCCchhh------hHHHHHHHHHCCCeEEEechHHHHhhhC--------------CHHHHH-HHHHHHHHHHH
Confidence 57788877665533 5889999999999999999888766654 223434 89999999999
Q ss_pred HHhC-CeEEEEEeChhHHHHHHHHhccc--hhhhHhheeeecchh
Q 035617 182 EQTG-QKIHYVGHSLGTLIALASFSEGL--QVDKLKSAALLSPIA 223 (422)
Q Consensus 182 ~~~~-~~i~l~G~S~Gg~~a~~~~~~~~--~~~~v~~~v~~~p~~ 223 (422)
++.+ +++.|+|+|+|+-+......+-| ..++|+.+++++|..
T Consensus 63 ~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 63 ARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999 99999999999988776655533 224899999999864
No 120
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.00 E-value=2.5e-09 Score=99.29 Aligned_cols=101 Identities=23% Similarity=0.252 Sum_probs=75.4
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC--CCCCCCCCCCCCcccccccChHHHHhchHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGT--RFSRRHTSLDPSQMEFWNWSWDELVAYDLPA 175 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~--G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 175 (422)
...|.|+|-||.+.....+ ..+++.+++.||-|.++|++|. |....... .... |....|-|-. .|+..
T Consensus 69 ~~~PlvvlshG~Gs~~~~f------~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~--~~~~-~~p~~~~erp-~dis~ 138 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTGF------AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYA--GPGS-YAPAEWWERP-LDISA 138 (365)
T ss_pred CcCCeEEecCCCCCCccch------hhhHHHHhhCceEEEeccCCCcccccCChhhc--CCcc-cchhhhhccc-ccHHH
Confidence 3679999999999998875 6788899999999999999994 43333222 1111 2222333434 89999
Q ss_pred HHHHHHHH-----h----C-CeEEEEEeChhHHHHHHHHhccc
Q 035617 176 VFDHVYEQ-----T----G-QKIHYVGHSLGTLIALASFSEGL 208 (422)
Q Consensus 176 ~i~~i~~~-----~----~-~~i~l~G~S~Gg~~a~~~~~~~~ 208 (422)
+++++.+. . . .+|.++|||+||.+++..+..+.
T Consensus 139 lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 139 LLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred HHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 99999888 2 2 68999999999999999877543
No 121
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.99 E-value=9.3e-10 Score=97.82 Aligned_cols=71 Identities=7% Similarity=0.072 Sum_probs=46.2
Q ss_pred ccCCCCCCCccEEEEEeCCCccCChh---HHHHHHhcccCCCCC-ceeeEEcCCC-ccccc------c------------
Q 035617 345 YNISNIPHDLPLFVSYGGNDALADLT---QYLLYLCKLFSKSGE-SLNLICVMSK-SLSFQ------V------------ 401 (422)
Q Consensus 345 ~~l~~i~~~~Pvlii~G~~D~~v~~~---~~l~~~l~~~~~~~~-~~~~~~i~~~-H~~~~------~------------ 401 (422)
..+++|+ +|+|+++|++|.+.|.. +.+.+++ ..++.. ..+.+.+|++ |+... .
T Consensus 109 IpvE~i~--~piLli~g~dD~~WpS~~~a~~i~~rL--~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~ 184 (213)
T PF08840_consen 109 IPVEKIK--GPILLISGEDDQIWPSSEMAEQIEERL--KAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLA 184 (213)
T ss_dssp --GGG----SEEEEEEETT-SSS-HHHHHHHHHHHH--HCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE
T ss_pred ccHHHcC--CCEEEEEeCCCCccchHHHHHHHHHHH--HHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCccc
Confidence 4678887 99999999999999988 6777777 554433 4678889999 98643 1
Q ss_pred ----------CchhHHHHHHHHHhhhcC
Q 035617 402 ----------SPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 402 ----------~~~~v~~~i~~fl~~~~~ 419 (422)
+.++.|+.+++||++++.
T Consensus 185 ~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 185 WGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp --B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 346788999999999874
No 122
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.98 E-value=8.2e-08 Score=90.14 Aligned_cols=134 Identities=20% Similarity=0.103 Sum_probs=87.4
Q ss_pred EEECCCCcEEEEEEeeCCCCCCCCC-CCCCcEEEecCCCCCCcc--cccCCCCCCHHHHH-HhCCCeEEEeCCCCCCCCC
Q 035617 73 DVTTKDGYILNLQRIPEGRAAGGGQ-IKRPPVLIQHGVLVDGLT--WLLNPPEQNLPLIL-ADHGFDVWIANTRGTRFSR 148 (422)
Q Consensus 73 ~v~t~dG~~l~~~~~~~~~~~~~~~-~~~~~vll~HG~~~~~~~--~~~~~~~~~l~~~l-~~~g~~v~~~d~rG~G~S~ 148 (422)
.++......+..+.+.+... .. ...|.||++||.+--..+ +. .+..+...+ .+.+--|+.+|||= ..
T Consensus 65 dv~~~~~~~l~vRly~P~~~---~~~~~~p~lvyfHGGGf~~~S~~~~---~y~~~~~~~a~~~~~vvvSVdYRL---AP 135 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTSS---SSETKLPVLVYFHGGGFCLGSANSP---AYDSFCTRLAAELNCVVVSVDYRL---AP 135 (336)
T ss_pred eeEecCCCCeEEEEEcCCCC---CcccCceEEEEEeCCccEeCCCCCc---hhHHHHHHHHHHcCeEEEecCccc---CC
Confidence 34444444455554443321 22 467999999998764332 21 145666666 45688999999994 22
Q ss_pred CCCCCCCCcccccccChHHHHhchHHHHHHHHHHH------hC-CeEEEEEeChhHHHHHHHHhcc----chhhhHhhee
Q 035617 149 RHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQ------TG-QKIHYVGHSLGTLIALASFSEG----LQVDKLKSAA 217 (422)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~------~~-~~i~l~G~S~Gg~~a~~~~~~~----~~~~~v~~~v 217 (422)
.++- |. +.+|..+++.|+.+. .+ ++++|+|-|-||.+|...+.+- ....+|++.|
T Consensus 136 Eh~~--Pa------------~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~i 201 (336)
T KOG1515|consen 136 EHPF--PA------------AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQI 201 (336)
T ss_pred CCCC--Cc------------cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEE
Confidence 2222 21 237777888888875 23 8899999999999999877762 1234899999
Q ss_pred eecchhhccchh
Q 035617 218 LLSPIAYLSYMR 229 (422)
Q Consensus 218 ~~~p~~~~~~~~ 229 (422)
++-|........
T Consensus 202 li~P~~~~~~~~ 213 (336)
T KOG1515|consen 202 LIYPFFQGTDRT 213 (336)
T ss_pred EEecccCCCCCC
Confidence 999987655443
No 123
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.97 E-value=2.4e-09 Score=95.76 Aligned_cols=106 Identities=21% Similarity=0.187 Sum_probs=72.4
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHh--------CCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHh
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILAD--------HGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVA 170 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~--------~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~ 170 (422)
.+.+|||+||+.++...| ++++..+.+ ..+++++.|+......-. ...+.+..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~------rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~------------g~~l~~q~- 63 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQV------RSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH------------GRTLQRQA- 63 (225)
T ss_pred CCCEEEEECcCCCCHhHH------HHHHHHHhhhhhhccCccceeEEEeccCccccccc------------cccHHHHH-
Confidence 478999999999988876 555555521 248899999887531111 11222222
Q ss_pred chHHHHHHHHHHHh-----C-CeEEEEEeChhHHHHHHHHhccch-hhhHhheeeecchh
Q 035617 171 YDLPAVFDHVYEQT-----G-QKIHYVGHSLGTLIALASFSEGLQ-VDKLKSAALLSPIA 223 (422)
Q Consensus 171 ~D~~~~i~~i~~~~-----~-~~i~l~G~S~Gg~~a~~~~~~~~~-~~~v~~~v~~~p~~ 223 (422)
+-+...++.+.+.. + ++|++|||||||.++-.++...+. .+.|+.+|.++.+.
T Consensus 64 ~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 64 EFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 33456666666665 3 899999999999999988776432 24799999888653
No 124
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.96 E-value=3e-08 Score=93.95 Aligned_cols=111 Identities=21% Similarity=0.143 Sum_probs=77.0
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
.+.|+||++||.+-....-.. .....+..+...|+.|+.+|||=.-+- .+.. ..+|+.+++
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe~----------------~~p~-~~~d~~~a~ 137 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPEH----------------PFPA-ALEDAYAAY 137 (312)
T ss_pred CCCcEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCCC----------------CCCc-hHHHHHHHH
Confidence 457999999998654333110 013445556678999999999963211 2222 237788999
Q ss_pred HHHHHHh---C---CeEEEEEeChhHHHHHHHHhccch--hhhHhheeeecchhhccc
Q 035617 178 DHVYEQT---G---QKIHYVGHSLGTLIALASFSEGLQ--VDKLKSAALLSPIAYLSY 227 (422)
Q Consensus 178 ~~i~~~~---~---~~i~l~G~S~Gg~~a~~~~~~~~~--~~~v~~~v~~~p~~~~~~ 227 (422)
.++.+.. + ++|.++|+|-||.+++.++..... ....++.++++|......
T Consensus 138 ~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 138 RWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 9998773 2 889999999999999987765321 115789999999876553
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.95 E-value=1.9e-08 Score=84.88 Aligned_cols=105 Identities=11% Similarity=0.122 Sum_probs=76.2
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
..|..||+||.-.....-.. --+.+.-+.++||+|..++ ++.+.. +.++.+.. .|...-++
T Consensus 66 ~~klfIfIHGGYW~~g~rk~---clsiv~~a~~~gY~vasvg---Y~l~~q------------~htL~qt~-~~~~~gv~ 126 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKM---CLSIVGPAVRRGYRVASVG---YNLCPQ------------VHTLEQTM-TQFTHGVN 126 (270)
T ss_pred CccEEEEEecchhhcCchhc---ccchhhhhhhcCeEEEEec---cCcCcc------------cccHHHHH-HHHHHHHH
Confidence 47899999996432222100 1344455778899999875 455544 34666655 78889999
Q ss_pred HHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 179 HVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 179 ~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
|+.+.+. +++.+.|||-|+.+++.+..+.. ..+|.+++++|...
T Consensus 127 filk~~~n~k~l~~gGHSaGAHLa~qav~R~r-~prI~gl~l~~GvY 172 (270)
T KOG4627|consen 127 FILKYTENTKVLTFGGHSAGAHLAAQAVMRQR-SPRIWGLILLCGVY 172 (270)
T ss_pred HHHHhcccceeEEEcccchHHHHHHHHHHHhc-CchHHHHHHHhhHh
Confidence 9999988 78899999999999999877632 13899999998764
No 126
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.95 E-value=4.6e-08 Score=90.69 Aligned_cols=117 Identities=15% Similarity=0.094 Sum_probs=80.4
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCH-HHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccc-cChHHHHhchHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNL-PLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWN-WSWDELVAYDLPA 175 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l-~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~-~~~~~~~~~D~~~ 175 (422)
+.+|.+|.+.|-+++.... +..+ |.-|.++|+..+++..+=||.-+...-....-....| +........+..+
T Consensus 90 ~~rp~~IhLagTGDh~f~r-----R~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~ 164 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWR-----RRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRA 164 (348)
T ss_pred CCCceEEEecCCCccchhh-----hhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHH
Confidence 4589999999998865543 3555 8888889999999999999854321100000000001 1122223466778
Q ss_pred HHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 176 VFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 176 ~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
+++|+.++ | .++.+.|.||||.+|..+++..| ..|..+-++++.
T Consensus 165 Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p--~pv~~vp~ls~~ 209 (348)
T PF09752_consen 165 LLHWLERE-GYGPLGLTGISMGGHMAALAASNWP--RPVALVPCLSWS 209 (348)
T ss_pred HHHHHHhc-CCCceEEEEechhHhhHHhhhhcCC--CceeEEEeeccc
Confidence 99999887 8 99999999999999999998766 456666666653
No 127
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.92 E-value=1.9e-08 Score=88.96 Aligned_cols=110 Identities=19% Similarity=0.240 Sum_probs=76.2
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCccccccc-------ChHHHHh
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNW-------SWDELVA 170 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~-------~~~~~~~ 170 (422)
.+.|.||++||.+++...+.. ...+...-.++||-|+.++....... ...|+| +..| .
T Consensus 14 ~~~PLVv~LHG~~~~a~~~~~---~s~~~~lAd~~GfivvyP~~~~~~~~----------~~cw~w~~~~~~~g~~d--~ 78 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAEDFAA---GSGWNALADREGFIVVYPEQSRRANP----------QGCWNWFSDDQQRGGGD--V 78 (220)
T ss_pred CCCCEEEEeCCCCCCHHHHHh---hcCHHHHhhcCCeEEEcccccccCCC----------CCcccccccccccCccc--h
Confidence 357999999999998887643 23444444456899999985421111 011111 1111 1
Q ss_pred chHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 171 YDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
..+.++++++.++.+ .+|++.|+|.||+++..++..+| +.+.++...+...+
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~p--d~faa~a~~sG~~~ 133 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYP--DLFAAVAVVSGVPY 133 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCC--ccceEEEeeccccc
Confidence 346688999988877 79999999999999999988666 88998888876543
No 128
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.92 E-value=1.9e-08 Score=81.50 Aligned_cols=107 Identities=15% Similarity=0.075 Sum_probs=68.8
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCC-CCCCCCCCcccccccCh-HHHHhchHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSR-RHTSLDPSQMEFWNWSW-DELVAYDLPAV 176 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~-~~~~~~~~~~~~~~~~~-~~~~~~D~~~~ 176 (422)
...+|||-||.+.+.++=. ....+..|+.+|+.|.-++++-.-.-+ +.... |+..+ +. .++. ..
T Consensus 13 ~~~tilLaHGAGasmdSt~----m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkP-p~~~~----t~~~~~~-----~~ 78 (213)
T COG3571 13 APVTILLAHGAGASMDSTS----MTAVAAALARRGWLVARFEFPYMAARRTGRRKP-PPGSG----TLNPEYI-----VA 78 (213)
T ss_pred CCEEEEEecCCCCCCCCHH----HHHHHHHHHhCceeEEEeecchhhhccccCCCC-cCccc----cCCHHHH-----HH
Confidence 4568999999998877632 367788899999999999875432111 11111 11111 11 1222 33
Q ss_pred HHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecc
Q 035617 177 FDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 177 i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
+-.+.+... .++++-|+||||-++.+.+..-. ..|+++++++=
T Consensus 79 ~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~--A~i~~L~clgY 122 (213)
T COG3571 79 IAQLRAGLAEGPLIIGGKSMGGRVASMVADELQ--APIDGLVCLGY 122 (213)
T ss_pred HHHHHhcccCCceeeccccccchHHHHHHHhhc--CCcceEEEecC
Confidence 334545444 79999999999999988877532 35889998873
No 129
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.88 E-value=1.6e-07 Score=81.87 Aligned_cols=115 Identities=20% Similarity=0.185 Sum_probs=81.8
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCC---CeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHG---FDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLP 174 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g---~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~ 174 (422)
.+++.|+++.|++|....| ..++..|..+- +.||.+-..||-.-..+....++...=-.|++++.+.
T Consensus 27 ~~~~li~~IpGNPG~~gFY------~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~---- 96 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFY------TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVD---- 96 (301)
T ss_pred CCceEEEEecCCCCchhHH------HHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHH----
Confidence 4689999999999999874 77777776542 5599999999975542221111111001566766554
Q ss_pred HHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 175 AVFDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 175 ~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
.-++++.+..+ .+++++|||.|+.+.+..+-.......|..++++-|-
T Consensus 97 HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 97 HKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred HHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 77788877777 8999999999999999877644333478888888874
No 130
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.85 E-value=1.6e-08 Score=91.70 Aligned_cols=130 Identities=19% Similarity=0.129 Sum_probs=97.6
Q ss_pred eEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC
Q 035617 70 QEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR 149 (422)
Q Consensus 70 e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~ 149 (422)
.+..+.+.||..+...++...... ....+..|+++-|..+-.+.-..+.| ++.||.|..+|++|++.|++
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~--~~ngq~LvIC~EGNAGFYEvG~m~tP--------~~lgYsvLGwNhPGFagSTG 284 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQ--SGNGQDLVICFEGNAGFYEVGVMNTP--------AQLGYSVLGWNHPGFAGSTG 284 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCC--CCCCceEEEEecCCccceEeeeecCh--------HHhCceeeccCCCCccccCC
Confidence 567899999999988777544211 22346788999998775554333323 36799999999999999998
Q ss_pred CCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 150 HTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
-+... .+. .-+.++++|.....+ +.|++.|+|.||..+..+|+..| .|+++|+.+...++
T Consensus 285 ~P~p~-----------n~~--nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YP---dVkavvLDAtFDDl 347 (517)
T KOG1553|consen 285 LPYPV-----------NTL--NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYP---DVKAVVLDATFDDL 347 (517)
T ss_pred CCCcc-----------cch--HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCC---CceEEEeecchhhh
Confidence 65422 221 224488999988888 78999999999999999999776 69999999986543
No 131
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.84 E-value=4.9e-09 Score=92.56 Aligned_cols=90 Identities=28% Similarity=0.301 Sum_probs=58.2
Q ss_pred CcEEEecCCCC-CCcccccCCCCCCHHHHHHhCCCe---EEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 101 PPVLIQHGVLV-DGLTWLLNPPEQNLPLILADHGFD---VWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 101 ~~vll~HG~~~-~~~~~~~~~~~~~l~~~l~~~g~~---v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
.||||+||..+ ....| ..++..|.++||. |+++++-....+..... .....+.+ .++.+.
T Consensus 2 ~PVVlVHG~~~~~~~~w------~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~---------~~~~~~~~-~~l~~f 65 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNW------STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQN---------AHMSCESA-KQLRAF 65 (219)
T ss_dssp --EEEE--TTTTTCGGC------CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHH---------HHB-HHHH-HHHHHH
T ss_pred CCEEEECCCCcchhhCH------HHHHHHHHHcCCCcceeEeccCCCCCCCCcccc---------cccchhhH-HHHHHH
Confidence 58999999999 55677 7788889999998 89999965443211000 00112223 678899
Q ss_pred HHHHHHHhCCeEEEEEeChhHHHHHHHHhc
Q 035617 177 FDHVYEQTGQKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 177 i~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
|+.+++.++.+|.||||||||.++-.+...
T Consensus 66 I~~Vl~~TGakVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 66 IDAVLAYTGAKVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHT--EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHhhCCEEEEEEcCCcCHHHHHHHHH
Confidence 999999998999999999999999988764
No 132
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.83 E-value=6.2e-09 Score=92.66 Aligned_cols=122 Identities=15% Similarity=0.123 Sum_probs=59.3
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCC-CCCCCCC----------CCCCcccccccChHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTR-FSRRHTS----------LDPSQMEFWNWSWDE 167 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G-~S~~~~~----------~~~~~~~~~~~~~~~ 167 (422)
+++-||++||++.|+..+..+. ..+.+.|.+.++..+.+|-+--- ...+... .......+|+..-.+
T Consensus 3 ~k~riLcLHG~~~na~if~~q~--~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQT--SALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHT--HHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcCHHHHHHHH--HHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 4789999999999999886543 45666776657999988865421 0000000 001112223322212
Q ss_pred HHhchHHHHHHHHHHHhC--Ce-EEEEEeChhHHHHHHHHhccch------hhhHhheeeecch
Q 035617 168 LVAYDLPAVFDHVYEQTG--QK-IHYVGHSLGTLIALASFSEGLQ------VDKLKSAALLSPI 222 (422)
Q Consensus 168 ~~~~D~~~~i~~i~~~~~--~~-i~l~G~S~Gg~~a~~~~~~~~~------~~~v~~~v~~~p~ 222 (422)
....++...++++.+... .+ ..|+|+|+||.+|..++..... ...++.+|++|+.
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~ 144 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGF 144 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES--
T ss_pred ccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEccc
Confidence 223566777777777665 54 5699999999999988765321 1246777777754
No 133
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.83 E-value=1.7e-08 Score=97.27 Aligned_cols=116 Identities=22% Similarity=0.286 Sum_probs=64.5
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCC------CCCC-CCC----C-Ccc---cc---
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFS------RRHT-SLD----P-SQM---EF--- 160 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S------~~~~-~~~----~-~~~---~~--- 160 (422)
+-|+|||-||++++... +..++..||.+||-|+++|+|-.-.+ ++.. ... . .+. .+
T Consensus 99 ~~PvvIFSHGlgg~R~~------yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTS------YSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDF 172 (379)
T ss_dssp -EEEEEEE--TT--TTT------THHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE----
T ss_pred CCCEEEEeCCCCcchhh------HHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccc
Confidence 46999999999999998 48899999999999999999964211 0000 000 0 000 00
Q ss_pred ---cccCh--HH--HHhchHHHHHHHHHHH----------------------hC-CeEEEEEeChhHHHHHHHHhccchh
Q 035617 161 ---WNWSW--DE--LVAYDLPAVFDHVYEQ----------------------TG-QKIHYVGHSLGTLIALASFSEGLQV 210 (422)
Q Consensus 161 ---~~~~~--~~--~~~~D~~~~i~~i~~~----------------------~~-~~i~l~G~S~Gg~~a~~~~~~~~~~ 210 (422)
..+.. .+ +=..|+..+++.+.+. .+ .+|.++|||+||++++.++.+.
T Consensus 173 ~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d--- 249 (379)
T PF03403_consen 173 DPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD--- 249 (379)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH----
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc---
Confidence 01110 01 1125666777777531 12 5799999999999999988765
Q ss_pred hhHhheeeecchh
Q 035617 211 DKLKSAALLSPIA 223 (422)
Q Consensus 211 ~~v~~~v~~~p~~ 223 (422)
.++++.|++.|+.
T Consensus 250 ~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 250 TRFKAGILLDPWM 262 (379)
T ss_dssp TT--EEEEES---
T ss_pred cCcceEEEeCCcc
Confidence 4899999998864
No 134
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.82 E-value=6.2e-08 Score=83.33 Aligned_cols=60 Identities=8% Similarity=0.028 Sum_probs=47.7
Q ss_pred CCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCCccccccCchhHHHHHHHHHhhhcC
Q 035617 349 NIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSKSLSFQVSPQLKMIAVMALFQRQAS 419 (422)
Q Consensus 349 ~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~H~~~~~~~~~v~~~i~~fl~~~~~ 419 (422)
.++ +|.|-|.|+.|.+++.. +.|++.+ ++ ..+...|++|.+.. .+...+.|.+||+...+
T Consensus 161 ~i~--~PSLHi~G~~D~iv~~~~s~~L~~~~--~~-----a~vl~HpggH~VP~--~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 161 PLS--TPSLHIFGETDTIVPSERSEQLAESF--KD-----ATVLEHPGGHIVPN--KAKYKEKIADFIQSFLQ 222 (230)
T ss_pred CCC--CCeeEEecccceeecchHHHHHHHhc--CC-----CeEEecCCCccCCC--chHHHHHHHHHHHHHHH
Confidence 444 99999999999999999 9999999 87 45555555598874 44678889999887643
No 135
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.77 E-value=1e-07 Score=86.39 Aligned_cols=118 Identities=19% Similarity=0.214 Sum_probs=69.4
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHH-hCCC--eEEEe--CCCCCCCCCCCCC---CCCC-cccc-ccc--Ch
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILA-DHGF--DVWIA--NTRGTRFSRRHTS---LDPS-QMEF-WNW--SW 165 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~-~~g~--~v~~~--d~rG~G~S~~~~~---~~~~-~~~~-~~~--~~ 165 (422)
....|.||+||++++...+ ..++..+. ++|. .++.. +--|+=.-.+... ..|- +-.| ++. ++
T Consensus 9 ~~~tPTifihG~~gt~~s~------~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~ 82 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSF------NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANY 82 (255)
T ss_dssp -S-EEEEEE--TTGGCCCC------HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHH
T ss_pred cCCCcEEEECCCCCChhHH------HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCH
Confidence 3457899999999999885 77888897 6664 34443 3333311111100 0010 0011 011 23
Q ss_pred HHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccch---hhhHhheeeecch
Q 035617 166 DELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQ---VDKLKSAALLSPI 222 (422)
Q Consensus 166 ~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~---~~~v~~~v~~~p~ 222 (422)
...+ .=+..++.++.++.+ +++.+|||||||..++.|+..... ..++..+|.++.+
T Consensus 83 ~~qa-~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 83 KKQA-KWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp HHHH-HHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred HHHH-HHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 3333 456789999999889 999999999999999998876321 1167888888864
No 136
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.72 E-value=2.2e-07 Score=86.64 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=45.8
Q ss_pred CccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhhhcCc
Q 035617 353 DLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQASM 420 (422)
Q Consensus 353 ~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~~~~ 420 (422)
++|++|.+|..|.++|+. +.+.+++ -..+...++++.++.. |....-. -....++||.+.++.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~--c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKW--CAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFAG 284 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHH--HHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHCC
Confidence 489999999999999999 6666655 3333246889999999 9876411 136677888877553
No 137
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.70 E-value=6.2e-08 Score=95.48 Aligned_cols=139 Identities=19% Similarity=0.119 Sum_probs=99.3
Q ss_pred cCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEec--CCCCCCcccccCCCCCCHHH---HHHhCCCeEEEe
Q 035617 65 HGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQH--GVLVDGLTWLLNPPEQNLPL---ILADHGFDVWIA 139 (422)
Q Consensus 65 ~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~H--G~~~~~~~~~~~~~~~~l~~---~l~~~g~~v~~~ 139 (422)
.|+...++.|+..||+.|....+.+.. .++.|+++..+ -+.-+. +... ....... +++.+||.|+..
T Consensus 15 ~~~~~~~v~V~MRDGvrL~~dIy~Pa~-----~g~~Pvll~~~~~Py~k~~--~~~~-~~~~~~p~~~~~aa~GYavV~q 86 (563)
T COG2936 15 AGYIERDVMVPMRDGVRLAADIYRPAG-----AGPLPVLLSRTRLPYRKRN--GTFG-PQLSALPQPAWFAAQGYAVVNQ 86 (563)
T ss_pred cceeeeeeeEEecCCeEEEEEEEccCC-----CCCCceeEEeecccccccc--ccCc-chhhcccccceeecCceEEEEe
Confidence 446667789999999999987765552 25678888888 332221 1110 0122222 577889999999
Q ss_pred CCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhhee
Q 035617 140 NTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAA 217 (422)
Q Consensus 140 d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v 217 (422)
|.||.|.|++.-....+ + ..+|--.+|+|+.++.= .+|..+|.|++|...+.+|+..| ..+++++
T Consensus 87 DvRG~~~SeG~~~~~~~---------~--E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~p--PaLkai~ 153 (563)
T COG2936 87 DVRGRGGSEGVFDPESS---------R--EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQP--PALKAIA 153 (563)
T ss_pred cccccccCCcccceecc---------c--cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCC--chheeec
Confidence 99999999985432211 1 23788899999988643 89999999999999999888754 4788888
Q ss_pred eecchhh
Q 035617 218 LLSPIAY 224 (422)
Q Consensus 218 ~~~p~~~ 224 (422)
..++...
T Consensus 154 p~~~~~D 160 (563)
T COG2936 154 PTEGLVD 160 (563)
T ss_pred ccccccc
Confidence 7776543
No 138
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.61 E-value=8.1e-06 Score=76.71 Aligned_cols=144 Identities=19% Similarity=0.116 Sum_probs=89.5
Q ss_pred eeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCC--CCC
Q 035617 69 CQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRG--TRF 146 (422)
Q Consensus 69 ~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG--~G~ 146 (422)
-|-..+...+...+.+++-.... ..++.||++||.+.+...-.. -..|.+.|.+.|+.++.+..+. ...
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~~~------~~~G~vIilp~~g~~~d~p~~---i~~LR~~L~~~GW~Tlsit~P~~~~~~ 132 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPANSA------KPQGAVIILPDWGEHPDWPGL---IAPLRRELPDHGWATLSITLPDPAPPA 132 (310)
T ss_pred hhcEEeecCCEEEEEEEecccCC------CCceEEEEecCCCCCCCcHhH---HHHHHHHhhhcCceEEEecCCCccccc
Confidence 35556666555555555543332 467899999999887653111 2467778899999999998887 111
Q ss_pred CCCCC------------CC-CCCcc---------cccccChHHHHhchHHHHHHHHHHHhCCeEEEEEeChhHHHHHHHH
Q 035617 147 SRRHT------------SL-DPSQM---------EFWNWSWDELVAYDLPAVFDHVYEQTGQKIHYVGHSLGTLIALASF 204 (422)
Q Consensus 147 S~~~~------------~~-~~~~~---------~~~~~~~~~~~~~D~~~~i~~i~~~~~~~i~l~G~S~Gg~~a~~~~ 204 (422)
+.... .. .++.. +- .-...+....-+.++++++.+..+.+++|+||+.|+..+..+.
T Consensus 133 ~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~l 211 (310)
T PF12048_consen 133 SPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA-REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYL 211 (310)
T ss_pred CCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH-hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHH
Confidence 10000 00 00000 00 0012233334566777777554437799999999999999999
Q ss_pred hccchhhhHhheeeecchh
Q 035617 205 SEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 205 ~~~~~~~~v~~~v~~~p~~ 223 (422)
+..+. ..++++|+++|..
T Consensus 212 a~~~~-~~~daLV~I~a~~ 229 (310)
T PF12048_consen 212 AEKPP-PMPDALVLINAYW 229 (310)
T ss_pred hcCCC-cccCeEEEEeCCC
Confidence 87652 2589999999853
No 139
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.60 E-value=1.3e-06 Score=72.64 Aligned_cols=55 Identities=18% Similarity=0.091 Sum_probs=42.2
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc---cCchhHHHHHHHHHhh
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ---VSPQLKMIAVMALFQR 416 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~---~~~~~v~~~i~~fl~~ 416 (422)
.|.+++..++|+.++++ +.+.+.. .+ .++...++ |..-. ....+.+..+-+|+.+
T Consensus 118 fps~vvaSrnDp~~~~~~a~~~a~~w--gs------~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 118 FPSVVVASRNDPYVSYEHAEDLANAW--GS------ALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CceeEEEecCCCCCCHHHHHHHHHhc--cH------hheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 69999999999999999 8888888 43 56777788 87654 5566667776666644
No 140
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.59 E-value=1.7e-07 Score=91.66 Aligned_cols=88 Identities=18% Similarity=0.256 Sum_probs=70.2
Q ss_pred CCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHH
Q 035617 123 QNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIAL 201 (422)
Q Consensus 123 ~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~ 201 (422)
..+++.|.+.||.+ ..|++|+|++.+... ..++.. .++...++.+.+..+ .+++|+||||||.++.
T Consensus 111 ~~li~~L~~~GY~~-~~dL~g~gYDwR~~~-----------~~~~~~-~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 111 HDMIEQLIKWGYKE-GKTLFGFGYDFRQSN-----------RLPETM-DGLKKKLETVYKASGGKKVNIISHSMGGLLVK 177 (440)
T ss_pred HHHHHHHHHcCCcc-CCCcccCCCCccccc-----------cHHHHH-HHHHHHHHHHHHHcCCCCEEEEEECHhHHHHH
Confidence 67888899999866 889999999976421 123334 788899999988887 8999999999999999
Q ss_pred HHHhccch--hhhHhheeeecchh
Q 035617 202 ASFSEGLQ--VDKLKSAALLSPIA 223 (422)
Q Consensus 202 ~~~~~~~~--~~~v~~~v~~~p~~ 223 (422)
.++..++. ...|+.+|.++++.
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECCCC
Confidence 98876542 24689999998763
No 141
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.54 E-value=2.4e-08 Score=94.37 Aligned_cols=114 Identities=20% Similarity=0.218 Sum_probs=68.5
Q ss_pred CCCCCCcEEEecCCCCCC--cccccCCCCCCHHHHHHh---CCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHh
Q 035617 96 GQIKRPPVLIQHGVLVDG--LTWLLNPPEQNLPLILAD---HGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVA 170 (422)
Q Consensus 96 ~~~~~~~vll~HG~~~~~--~~~~~~~~~~~l~~~l~~---~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~ 170 (422)
-+..+|+++++|||.++. ..|. ..+.+.+.+ .+++|+++||...-...- . . ........+
T Consensus 67 fn~~~pt~iiiHGw~~~~~~~~~~-----~~~~~all~~~~~d~NVI~VDWs~~a~~~Y-~------~--a~~n~~~vg- 131 (331)
T PF00151_consen 67 FNPSKPTVIIIHGWTGSGSSESWI-----QDMIKALLQKDTGDYNVIVVDWSRGASNNY-P------Q--AVANTRLVG- 131 (331)
T ss_dssp --TTSEEEEEE--TT-TT-TTTHH-----HHHHHHHHCC--S-EEEEEEE-HHHHSS-H-H------H--HHHHHHHHH-
T ss_pred cCCCCCeEEEEcCcCCcccchhHH-----HHHHHHHHhhccCCceEEEEcchhhccccc-c------c--hhhhHHHHH-
Confidence 346789999999999988 3563 445554434 479999999975321100 0 0 000122223
Q ss_pred chHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 171 YDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
..+..+++.+.+..+ ++|+|||||+||.+|-.++..-....+|..++.+.|+..
T Consensus 132 ~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 132 RQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 566677888876655 899999999999999988776432238999999999864
No 142
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.52 E-value=3.7e-05 Score=74.42 Aligned_cols=107 Identities=16% Similarity=0.176 Sum_probs=63.7
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
..|+|+|.+--..++...=.-..+...+...| ..|+.||.+-+.-.= .|.+ ++.+.. .-..+.+
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~dSevG~AL-~~GHPvYFV~F~p~P--------~pgQ------Tl~DV~-~ae~~Fv 129 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKPDSEVGVAL-RAGHPVYFVGFFPEP--------EPGQ------TLEDVM-RAEAAFV 129 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCcccHHHHHH-HcCCCeEEEEecCCC--------CCCC------cHHHHH-HHHHHHH
Confidence 45667777733333222100001234555566 459999998776321 1211 444433 2233555
Q ss_pred HHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 178 DHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 178 ~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
+.+.+..+ .+..|+|.|+||..++.+|+..| +.+.-+|+-+.+
T Consensus 130 ~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P--d~~gplvlaGaP 174 (581)
T PF11339_consen 130 EEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP--DLVGPLVLAGAP 174 (581)
T ss_pred HHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc--CccCceeecCCC
Confidence 66666665 58999999999999999999877 777766665543
No 143
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.52 E-value=2.8e-07 Score=82.93 Aligned_cols=114 Identities=15% Similarity=0.130 Sum_probs=76.9
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCC--eEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGF--DVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPA 175 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~--~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 175 (422)
.++..+||+||+..+...-. ...++.....|+ .++.+.|++.|.-.+... +-.-......++..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~-----~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~---------d~~~a~~s~~~l~~ 81 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDAL-----RRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY---------DRESARFSGPALAR 81 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHH-----HHHHHHHHHhCCCceEEEEEcCCCCChhhhhh---------hhhhHHHHHHHHHH
Confidence 45789999999988766531 344555555555 699999998875322110 11112234466677
Q ss_pred HHHHHHHHhC-CeEEEEEeChhHHHHHHHHhcc----c---hhhhHhheeeecchhhc
Q 035617 176 VFDHVYEQTG-QKIHYVGHSLGTLIALASFSEG----L---QVDKLKSAALLSPIAYL 225 (422)
Q Consensus 176 ~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~----~---~~~~v~~~v~~~p~~~~ 225 (422)
++..+.+..+ .+|++++||||+.+.+.++..- . ...++..+++.+|-...
T Consensus 82 ~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 82 FLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 7777777766 9999999999999998876651 1 12378899999986543
No 144
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.50 E-value=1.3e-06 Score=78.24 Aligned_cols=42 Identities=17% Similarity=0.039 Sum_probs=34.7
Q ss_pred HHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 179 HVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 179 ~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
-+.++.+ .+|+++|.|+||..++.++.+.| +.+++.+++|..
T Consensus 259 vlas~ynID~sRIYviGlSrG~~gt~al~~kfP--dfFAaa~~iaG~ 303 (387)
T COG4099 259 VLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP--DFFAAAVPIAGG 303 (387)
T ss_pred HHhhccCcccceEEEEeecCcchhhHHHHHhCc--hhhheeeeecCC
Confidence 4445555 78999999999999999999666 889999988853
No 145
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.46 E-value=2.9e-06 Score=76.51 Aligned_cols=117 Identities=19% Similarity=0.216 Sum_probs=72.7
Q ss_pred CCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCC----CCCCC-CCcccccc--------
Q 035617 96 GQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRR----HTSLD-PSQMEFWN-------- 162 (422)
Q Consensus 96 ~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~----~~~~~-~~~~~~~~-------- 162 (422)
++.+-|.|||-||++++...| ..++-.||.+||-|.++++|-+..+.- ..... +-.+.+..
T Consensus 114 k~~k~PvvvFSHGLggsRt~Y------Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~e 187 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGLGGSRTLY------SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANE 187 (399)
T ss_pred CCCCccEEEEecccccchhhH------HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCc
Confidence 345679999999999988874 677778999999999999998764421 11001 11111000
Q ss_pred --c-----ChHHHHhchHHHHHHHHHHH-----------------------hC-CeEEEEEeChhHHHHHHHHhccchhh
Q 035617 163 --W-----SWDELVAYDLPAVFDHVYEQ-----------------------TG-QKIHYVGHSLGTLIALASFSEGLQVD 211 (422)
Q Consensus 163 --~-----~~~~~~~~D~~~~i~~i~~~-----------------------~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~ 211 (422)
+ ....-+ .....++.-+++. .. .++.++|||.||+++....+.+.
T Consensus 188 kef~irNeqv~~R~-~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t--- 263 (399)
T KOG3847|consen 188 KEFHIRNEQVGQRA-QECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT--- 263 (399)
T ss_pred eeEEeeCHHHHHHH-HHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc---
Confidence 1 011111 2222333333221 12 56889999999999998877653
Q ss_pred hHhheeeecch
Q 035617 212 KLKSAALLSPI 222 (422)
Q Consensus 212 ~v~~~v~~~p~ 222 (422)
++++.|++..+
T Consensus 264 ~FrcaI~lD~W 274 (399)
T KOG3847|consen 264 DFRCAIALDAW 274 (399)
T ss_pred ceeeeeeeeee
Confidence 68888877654
No 146
>PRK04940 hypothetical protein; Provisional
Probab=98.42 E-value=1.4e-05 Score=67.91 Aligned_cols=53 Identities=11% Similarity=-0.025 Sum_probs=39.8
Q ss_pred cEEEEEeCCCccCChhHHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhh
Q 035617 355 PLFVSYGGNDALADLTQYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQR 416 (422)
Q Consensus 355 Pvlii~G~~D~~v~~~~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~ 416 (422)
-.+++..+.|.+.+. +...+.+ .. ..+..+.+++ |-. +.-++..+.|++|++.
T Consensus 126 r~~vllq~gDEvLDy-r~a~~~y--~~----~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDS-QRTAEEL--HP----YYEIVWDEEQTHKF--KNISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCH-HHHHHHh--cc----CceEEEECCCCCCC--CCHHHHHHHHHHHHhc
Confidence 458999999999998 5566666 55 1267788899 853 4566788999999853
No 147
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.41 E-value=6.5e-06 Score=70.68 Aligned_cols=111 Identities=18% Similarity=0.171 Sum_probs=81.0
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+--|||+-|++..--.- .+-..|+..|-+.+|..+-+-+|.+-.-.+ .+++.+=+ +|+..++++
T Consensus 36 ~~~vvfiGGLgdgLl~~---~y~~~L~~~lde~~wslVq~q~~Ssy~G~G------------t~slk~D~-edl~~l~~H 99 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLIC---LYTTMLNRYLDENSWSLVQPQLRSSYNGYG------------TFSLKDDV-EDLKCLLEH 99 (299)
T ss_pred EEEEEEEcccCCCcccc---ccHHHHHHHHhhccceeeeeeccccccccc------------cccccccH-HHHHHHHHH
Confidence 46789999987755432 123678888999999999987765311111 22333323 899999998
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
|..... .+|+|+|||.|+.-.++|+...-.+..|++.|+.+|+....
T Consensus 100 i~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 100 IQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred hhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 855444 79999999999999999987654457899999999987654
No 148
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.34 E-value=1.1e-06 Score=79.37 Aligned_cols=102 Identities=19% Similarity=0.186 Sum_probs=80.0
Q ss_pred CcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHH
Q 035617 101 PPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHV 180 (422)
Q Consensus 101 ~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i 180 (422)
|++.++||..+....| ..|+.+|... ..|+..+.||.|.-... .-++++++. ..++.|
T Consensus 1 ~pLF~fhp~~G~~~~~------~~L~~~l~~~-~~v~~l~a~g~~~~~~~-----------~~~l~~~a~----~yv~~I 58 (257)
T COG3319 1 PPLFCFHPAGGSVLAY------APLAAALGPL-LPVYGLQAPGYGAGEQP-----------FASLDDMAA----AYVAAI 58 (257)
T ss_pred CCEEEEcCCCCcHHHH------HHHHHHhccC-ceeeccccCcccccccc-----------cCCHHHHHH----HHHHHH
Confidence 5899999999998886 6778888765 89999999999843221 226777775 677778
Q ss_pred HHHhC-CeEEEEEeChhHHHHHHHHhccchh-hhHhheeeecchhh
Q 035617 181 YEQTG-QKIHYVGHSLGTLIALASFSEGLQV-DKLKSAALLSPIAY 224 (422)
Q Consensus 181 ~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~-~~v~~~v~~~p~~~ 224 (422)
++..+ .+.+|+|||+||.+|...|.+-... ..|..++++.++..
T Consensus 59 r~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 59 RRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 88888 9999999999999999988863212 37888888887654
No 149
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.31 E-value=2.3e-06 Score=72.83 Aligned_cols=125 Identities=20% Similarity=0.345 Sum_probs=75.7
Q ss_pred EEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeC--CCCCCCCCCCCCCCCCcccccc
Q 035617 85 QRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIAN--TRGTRFSRRHTSLDPSQMEFWN 162 (422)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d--~rG~G~S~~~~~~~~~~~~~~~ 162 (422)
.++|+... .+++-|++.++-|+....+.+.. ...+-+.-+++|+.|+.+| .||.-- ..+.+.||
T Consensus 32 vylPp~a~---~~k~~P~lf~LSGLTCT~~Nfi~---Ksg~qq~As~hgl~vV~PDTSPRG~~v--------~g~~eswD 97 (283)
T KOG3101|consen 32 VYLPPDAP---RGKRCPVLFYLSGLTCTHENFIE---KSGFQQQASKHGLAVVAPDTSPRGVEV--------AGDDESWD 97 (283)
T ss_pred EecCCCcc---cCCcCceEEEecCCcccchhhHh---hhhHHHhHhhcCeEEECCCCCCCcccc--------CCCccccc
Confidence 45555421 33456999999999998888743 2344445567899999999 455310 01111233
Q ss_pred cC-------------------hHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 163 WS-------------------WDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 163 ~~-------------------~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
|. +=+++...++.+++--.-... .++.+.||||||.-|+..+.+.+ .+.+++.+.+|.
T Consensus 98 FG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~--~kykSvSAFAPI 175 (283)
T KOG3101|consen 98 FGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNP--SKYKSVSAFAPI 175 (283)
T ss_pred ccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCc--ccccceeccccc
Confidence 32 222222233332221111112 57899999999999988777665 788999999987
Q ss_pred hhc
Q 035617 223 AYL 225 (422)
Q Consensus 223 ~~~ 225 (422)
..+
T Consensus 176 ~NP 178 (283)
T KOG3101|consen 176 CNP 178 (283)
T ss_pred cCc
Confidence 643
No 150
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.30 E-value=2.3e-05 Score=77.34 Aligned_cols=143 Identities=20% Similarity=0.172 Sum_probs=97.6
Q ss_pred cCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCc--ccccCCCCCCHHHHHHhCCCeEEEeCCC
Q 035617 65 HGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGL--TWLLNPPEQNLPLILADHGFDVWIANTR 142 (422)
Q Consensus 65 ~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~--~~~~~~~~~~l~~~l~~~g~~v~~~d~r 142 (422)
-.|.++.+.+.++||..+-+..+..... ...+++|.+|..||.-+-+- .|....- .|.+.|+-....|.|
T Consensus 437 s~y~~~r~~~~SkDGt~VPM~Iv~kk~~--k~dg~~P~LLygYGay~isl~p~f~~srl------~lld~G~Vla~a~VR 508 (712)
T KOG2237|consen 437 SDYVVERIEVSSKDGTKVPMFIVYKKDI--KLDGSKPLLLYGYGAYGISLDPSFRASRL------SLLDRGWVLAYANVR 508 (712)
T ss_pred cceEEEEEEEecCCCCccceEEEEechh--hhcCCCceEEEEecccceeecccccccee------EEEecceEEEEEeec
Confidence 3678899999999998888776654321 13356888888777654332 2322211 255689888888999
Q ss_pred CCCCCC--CCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhhee
Q 035617 143 GTRFSR--RHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAA 217 (422)
Q Consensus 143 G~G~S~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v 217 (422)
|-|.-. .|..-.. .-..-..+|..+..+|+.+..= .++.+.|.|-||.++.+++-++| +.+.++|
T Consensus 509 GGGe~G~~WHk~G~l--------akKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rP--dLF~avi 578 (712)
T KOG2237|consen 509 GGGEYGEQWHKDGRL--------AKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRP--DLFGAVI 578 (712)
T ss_pred cCcccccchhhccch--------hhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCc--hHhhhhh
Confidence 976332 1221110 0111123777899999988742 78999999999999999888877 8999999
Q ss_pred eecchhhc
Q 035617 218 LLSPIAYL 225 (422)
Q Consensus 218 ~~~p~~~~ 225 (422)
+-.|...+
T Consensus 579 a~VpfmDv 586 (712)
T KOG2237|consen 579 AKVPFMDV 586 (712)
T ss_pred hcCcceeh
Confidence 88887543
No 151
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.27 E-value=2.9e-05 Score=76.31 Aligned_cols=141 Identities=20% Similarity=0.217 Sum_probs=94.7
Q ss_pred CceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCC
Q 035617 66 GYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTR 145 (422)
Q Consensus 66 ~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G 145 (422)
+|.+|++..++.||+.+.++.+..+-. .+ +.|++|+--|...-+. .+... ... ....++|..-++.|.||-|
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~---~d-~~pTll~aYGGF~vsl--tP~fs-~~~-~~WLerGg~~v~ANIRGGG 462 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAK---KD-ENPTLLYAYGGFNISL--TPRFS-GSR-KLWLERGGVFVLANIRGGG 462 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCc---CC-CCceEEEecccccccc--CCccc-hhh-HHHHhcCCeEEEEecccCC
Confidence 788899999999999999998872210 22 5677665444333222 11111 223 4555779999999999977
Q ss_pred CCCC--CCC-CCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeee
Q 035617 146 FSRR--HTS-LDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALL 219 (422)
Q Consensus 146 ~S~~--~~~-~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~ 219 (422)
.=.. |.. ... + .+-+.+|..++.+.+.++.= +++.+.|-|=||.+.-.++.++| +.+.++++-
T Consensus 463 EfGp~WH~Aa~k~--------n-rq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrP--elfgA~v~e 531 (648)
T COG1505 463 EFGPEWHQAGMKE--------N-KQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRP--ELFGAAVCE 531 (648)
T ss_pred ccCHHHHHHHhhh--------c-chhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccCh--hhhCceeec
Confidence 3321 110 000 0 11144788899998877732 78999999999999998888777 889898888
Q ss_pred cchhhc
Q 035617 220 SPIAYL 225 (422)
Q Consensus 220 ~p~~~~ 225 (422)
-|...+
T Consensus 532 vPllDM 537 (648)
T COG1505 532 VPLLDM 537 (648)
T ss_pred cchhhh
Confidence 887544
No 152
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.18 E-value=1.4e-05 Score=80.68 Aligned_cols=129 Identities=17% Similarity=0.012 Sum_probs=78.1
Q ss_pred CCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhC-C-CeEEEeCCC-CC-CCCCCCC
Q 035617 76 TKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADH-G-FDVWIANTR-GT-RFSRRHT 151 (422)
Q Consensus 76 t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~-g-~~v~~~d~r-G~-G~S~~~~ 151 (422)
++|-..|.++.-.... ..++.|+||++||.+-....- .......|+.+ + +-|+.+|+| |. |.-....
T Consensus 75 sEdcl~l~i~~p~~~~----~~~~~pv~v~ihGG~~~~g~~-----~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~ 145 (493)
T cd00312 75 SEDCLYLNVYTPKNTK----PGNSLPVMVWIHGGGFMFGSG-----SLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGD 145 (493)
T ss_pred CCcCCeEEEEeCCCCC----CCCCCCEEEEEcCCccccCCC-----CCCChHHHHhcCCCEEEEEecccccccccccCCC
Confidence 5666555544421110 134679999999975432221 01112334443 3 899999999 43 2211100
Q ss_pred CCCCCcccccccChHHHHhchHHHHHHHHHHHh---C---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 152 SLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQT---G---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~---~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
. .. -...+..|..++++|+++.. + ++|.|+|+|.||..+...+........++++|+.|+..
T Consensus 146 ~-~~---------~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 146 I-EL---------PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred C-CC---------CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 0 00 01123478889999998763 3 79999999999999988777643335789999888654
No 153
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.17 E-value=2.1e-05 Score=78.07 Aligned_cols=134 Identities=16% Similarity=0.077 Sum_probs=85.4
Q ss_pred CcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCccccc---CCCCC------CH---HHHHHhCCCeEEEeCC-CCCC
Q 035617 79 GYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLL---NPPEQ------NL---PLILADHGFDVWIANT-RGTR 145 (422)
Q Consensus 79 G~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~---~~~~~------~l---~~~l~~~g~~v~~~d~-rG~G 145 (422)
+..+.+|++.+.. .....|+||+++|.++.+..+.. ++|.. .+ ...+.+ -.+++.+|. +|+|
T Consensus 60 ~~~lFyw~~~s~~----~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G 134 (462)
T PTZ00472 60 DKHYFYWAFGPRN----GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVG 134 (462)
T ss_pred CceEEEEEEEcCC----CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcC
Confidence 5678888887654 34567999999999998865421 11110 00 001222 257888896 6999
Q ss_pred CCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC----CeEEEEEeChhHHHHHHHHhcc----c----hhhhH
Q 035617 146 FSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG----QKIHYVGHSLGTLIALASFSEG----L----QVDKL 213 (422)
Q Consensus 146 ~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~----~~i~l~G~S~Gg~~a~~~~~~~----~----~~~~v 213 (422)
.|....... ..+.++.+ +|+..+++...++.+ .+++|+|||+||..+..+|.+- . ..-.+
T Consensus 135 ~S~~~~~~~-------~~~~~~~a-~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 135 FSYADKADY-------DHNESEVS-EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred cccCCCCCC-------CCChHHHH-HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 997532211 22334444 788888777665544 7899999999999988776651 0 00147
Q ss_pred hheeeecchhhc
Q 035617 214 KSAALLSPIAYL 225 (422)
Q Consensus 214 ~~~v~~~p~~~~ 225 (422)
+++++-+|....
T Consensus 207 kGi~IGNg~~dp 218 (462)
T PTZ00472 207 AGLAVGNGLTDP 218 (462)
T ss_pred EEEEEeccccCh
Confidence 788888876543
No 154
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.17 E-value=2.1e-06 Score=81.71 Aligned_cols=103 Identities=23% Similarity=0.232 Sum_probs=76.2
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCe---EEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFD---VWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~---v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
.-+++++||+..+...| ..+...+...|+. |+.+++.+.. ... +....+ +-+.+-
T Consensus 59 ~~pivlVhG~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~--------------~~~~~~-~ql~~~ 116 (336)
T COG1075 59 KEPIVLVHGLGGGYGNF------LPLDYRLAILGWLTNGVYAFELSGGD-GTY--------------SLAVRG-EQLFAY 116 (336)
T ss_pred CceEEEEccCcCCcchh------hhhhhhhcchHHHhcccccccccccC-CCc--------------cccccH-HHHHHH
Confidence 45999999998888887 4555567777877 9999988751 111 111112 334467
Q ss_pred HHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 177 FDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 177 i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
++.+...++ +++.|+||||||.++..++...+...+|+.++.++++-.
T Consensus 117 V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 117 VDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 777777778 999999999999999988887665579999999998643
No 155
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.17 E-value=8.2e-06 Score=75.61 Aligned_cols=115 Identities=14% Similarity=0.099 Sum_probs=82.1
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCe--EEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFD--VWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPA 175 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~--v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 175 (422)
..+..+||+||+..+-..= -..+++...+.|++ .+++-|+-.|.--+... |-.-.++...++..
T Consensus 114 ~~k~vlvFvHGfNntf~da-----v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~---------DreS~~~Sr~aLe~ 179 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDA-----VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY---------DRESTNYSRPALER 179 (377)
T ss_pred CCCeEEEEEcccCCchhHH-----HHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc---------chhhhhhhHHHHHH
Confidence 4578999999997766542 24577778777764 66778887664222110 11223445678889
Q ss_pred HHHHHHHHhC-CeEEEEEeChhHHHHHHHHhc----c--chhhhHhheeeecchhhcc
Q 035617 176 VFDHVYEQTG-QKIHYVGHSLGTLIALASFSE----G--LQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 176 ~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~----~--~~~~~v~~~v~~~p~~~~~ 226 (422)
++.+|.+..+ ++|+|++||||+.+++.++.+ . +.+.+|+-+|+-+|=....
T Consensus 180 ~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 180 LLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred HHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 9999988888 999999999999999887655 1 2456899999999866554
No 156
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.15 E-value=4.3e-06 Score=94.49 Aligned_cols=101 Identities=16% Similarity=0.094 Sum_probs=75.4
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+++++++||++++...| ..++..|.. ++.|+.+|.+|+|.+.. . .+++++++ +|+.+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~------~~l~~~l~~-~~~v~~~~~~g~~~~~~-----~------~~~l~~la-~~~~~~i~~ 1128 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF------SVLSRYLDP-QWSIYGIQSPRPDGPMQ-----T------ATSLDEVC-EAHLATLLE 1128 (1296)
T ss_pred CCCeEEecCCCCchHHH------HHHHHhcCC-CCcEEEEECCCCCCCCC-----C------CCCHHHHH-HHHHHHHHh
Confidence 57899999999998887 566666754 79999999999985532 1 45777777 555444443
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHhccc-hhhhHhheeeecch
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFSEGL-QVDKLKSAALLSPI 222 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~-~~~~v~~~v~~~p~ 222 (422)
+ .. .+++++||||||.++..+|.+.+ .+.++..++++++.
T Consensus 1129 ~---~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1129 Q---QPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred h---CCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 2 33 68999999999999999887531 12578888888764
No 157
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.14 E-value=3.5e-05 Score=69.99 Aligned_cols=58 Identities=14% Similarity=0.054 Sum_probs=48.7
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc-cCchhHHHHHHHHH
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ-VSPQLKMIAVMALF 414 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~-~~~~~v~~~i~~fl 414 (422)
+|-|+++++.|.+++.+ ++..++. .. .+..++.+.++++ |..|+ ..|+++++.+.+|+
T Consensus 179 ~p~lylYS~~D~l~~~~~ve~~~~~~--~~-~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 179 CPRLYLYSKADPLIPWRDVEEHAEEA--RR-KGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCeEEecCCCCcCcCHHHHHHHHHHH--HH-cCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 89999999999999999 6666665 43 2234788889999 99999 89999999999884
No 158
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.13 E-value=7.2e-05 Score=65.86 Aligned_cols=116 Identities=15% Similarity=0.019 Sum_probs=72.0
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCC-----CeEEEeCCCCCCCCCC----CCCCCCCccccc--ccChHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHG-----FDVWIANTRGTRFSRR----HTSLDPSQMEFW--NWSWDEL 168 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g-----~~v~~~d~rG~G~S~~----~~~~~~~~~~~~--~~~~~~~ 168 (422)
.-|.||+||++++..+. ...+..|...+ -=+..+|--|.=.-++ +....--+-+|. .-+..++
T Consensus 45 ~iPTIfIhGsgG~asS~------~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIPTIFIHGSGGTASSL------NGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccceEEEecCCCChhHH------HHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 45889999999999885 66677776654 2366677776311111 111000000000 0012222
Q ss_pred HhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccch---hhhHhheeeecch
Q 035617 169 VAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQ---VDKLKSAALLSPI 222 (422)
Q Consensus 169 ~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~---~~~v~~~v~~~p~ 222 (422)
. .=+..++.++.++.+ .++.++||||||.....|+..... ...++.+|.++..
T Consensus 119 s-~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 119 S-KWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred H-HHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 2 335689999999999 999999999999999998876311 1257788877754
No 159
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.12 E-value=4.3e-05 Score=65.55 Aligned_cols=56 Identities=9% Similarity=0.042 Sum_probs=42.0
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhh
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQR 416 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~ 416 (422)
.|++..||+.|++||.. +...+.+ ..++. .++++-+++- |....+ =.+.+..|+++
T Consensus 145 ~~i~~~Hg~~d~~vp~~~g~~s~~~l--~~~~~-~~~f~~y~g~~h~~~~~----e~~~~~~~~~~ 203 (206)
T KOG2112|consen 145 TPILLCHGTADPLVPFRFGEKSAQFL--KSLGV-RVTFKPYPGLGHSTSPQ----ELDDLKSWIKT 203 (206)
T ss_pred chhheecccCCceeehHHHHHHHHHH--HHcCC-ceeeeecCCccccccHH----HHHHHHHHHHH
Confidence 79999999999999999 6666666 44333 3888999999 977642 25566777765
No 160
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.05 E-value=7e-05 Score=70.97 Aligned_cols=113 Identities=23% Similarity=0.147 Sum_probs=69.9
Q ss_pred CCCCcEEEecCCCCCCcccccCCC-CCCHHHHHHhCCCeEEEeCCCCCC-CCCCCCCCCCCcccccccChHHHHhchHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPP-EQNLPLILADHGFDVWIANTRGTR-FSRRHTSLDPSQMEFWNWSWDELVAYDLPA 175 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~-~~~l~~~l~~~g~~v~~~d~rG~G-~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 175 (422)
+..|+||++||.+-.-.....+.. -..+-+.| + ...++++||.-.. .-.++.- ...+ .++.+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~~~~y---------PtQL-----~qlv~ 183 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDEHGHKY---------PTQL-----RQLVA 183 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccccCCCcC---------chHH-----HHHHH
Confidence 346999999998654433211100 01122223 2 4589999987643 0011111 1122 55668
Q ss_pred HHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccch---hhhHhheeeecchhhcc
Q 035617 176 VFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQ---VDKLKSAALLSPIAYLS 226 (422)
Q Consensus 176 ~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~---~~~v~~~v~~~p~~~~~ 226 (422)
..+++.+..| ++|.|+|-|-||.+++.++..-.. ...-+++|++||+..+.
T Consensus 184 ~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 184 TYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999997777 999999999999999886654111 01347999999987654
No 161
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.02 E-value=6.1e-05 Score=68.03 Aligned_cols=124 Identities=19% Similarity=0.128 Sum_probs=81.2
Q ss_pred CCcEEEEEEe-eCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCC-CC------CCCCCC
Q 035617 78 DGYILNLQRI-PEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANT-RG------TRFSRR 149 (422)
Q Consensus 78 dG~~l~~~~~-~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~-rG------~G~S~~ 149 (422)
+|....+++. |++. ..+.|.||++||-.++....... ..+-+...+.||-|..+|- .+ +|.+.+
T Consensus 43 ~g~~r~y~l~vP~g~-----~~~apLvv~LHG~~~sgag~~~~---sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~ 114 (312)
T COG3509 43 NGLKRSYRLYVPPGL-----PSGAPLVVVLHGSGGSGAGQLHG---TGWDALADREGFLVAYPDGYDRAWNANGCGNWFG 114 (312)
T ss_pred CCCccceEEEcCCCC-----CCCCCEEEEEecCCCChHHhhcc---cchhhhhcccCcEEECcCccccccCCCcccccCC
Confidence 4555565544 5442 24458999999999988775432 2344445567999999942 22 122211
Q ss_pred CCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecc
Q 035617 150 HTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
+..+ .-..+| ..+|.++++.+..+.+ .+|++.|.|-||.++..++..++ +.+.++..++.
T Consensus 115 p~~~--------~~g~dd--Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p--~~faa~A~VAg 177 (312)
T COG3509 115 PADR--------RRGVDD--VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYP--DIFAAIAPVAG 177 (312)
T ss_pred cccc--------cCCccH--HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCc--ccccceeeeec
Confidence 1110 012333 2457788999988888 59999999999999999998765 67777766664
No 162
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.02 E-value=0.00043 Score=69.09 Aligned_cols=142 Identities=20% Similarity=0.149 Sum_probs=93.2
Q ss_pred CceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCC
Q 035617 66 GYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTR 145 (422)
Q Consensus 66 ~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G 145 (422)
.|..+.+.++..||..+-+..+-..+. ....++|.+|.--|.-+.+..=. + ..-.-.|.++|+---+..-||-|
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~--~~~g~~p~lLygYGaYG~s~~p~--F--s~~~lSLlDRGfiyAIAHVRGGg 489 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDT--KLDGSAPLLLYGYGAYGISMDPS--F--SIARLSLLDRGFVYAIAHVRGGG 489 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEeccc--CCCCCCcEEEEEeccccccCCcC--c--ccceeeeecCceEEEEEEeeccc
Confidence 456677888889998777654433221 03456788888877655444211 1 11112367889877777889976
Q ss_pred CCCCCC----CCCCCcccccccChHHHHhchHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheee
Q 035617 146 FSRRHT----SLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAAL 218 (422)
Q Consensus 146 ~S~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~ 218 (422)
.-.+.= +...+.. ++ .|..++.+++.++.- +.|+++|-|-||+++.+.+.+.| +.++++|+
T Consensus 490 elG~~WYe~GK~l~K~N-----Tf-----~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P--~lf~~iiA 557 (682)
T COG1770 490 ELGRAWYEDGKLLNKKN-----TF-----TDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAP--DLFAGIIA 557 (682)
T ss_pred ccChHHHHhhhhhhccc-----cH-----HHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhCh--hhhhheee
Confidence 443210 0000111 22 566699999987743 68999999999999999988777 89999999
Q ss_pred ecchhhc
Q 035617 219 LSPIAYL 225 (422)
Q Consensus 219 ~~p~~~~ 225 (422)
-.|.+..
T Consensus 558 ~VPFVDv 564 (682)
T COG1770 558 QVPFVDV 564 (682)
T ss_pred cCCccch
Confidence 9987643
No 163
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.00 E-value=8.2e-05 Score=75.10 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=76.3
Q ss_pred ECCCCcEEEEEEeeCCCCC-CCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHh----------------CCCeEE
Q 035617 75 TTKDGYILNLQRIPEGRAA-GGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILAD----------------HGFDVW 137 (422)
Q Consensus 75 ~t~dG~~l~~~~~~~~~~~-~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~----------------~g~~v~ 137 (422)
++.|-|.+.+++-.....+ .....++-||||+.|+.|+... -+++|..... ..||.+
T Consensus 63 ~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQ------vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFF 136 (973)
T KOG3724|consen 63 PQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQ------VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFF 136 (973)
T ss_pred CCCCceEEEEecccccccccccccCCCceEEEecCCCCchHH------HHHHHHHHhhhhcCCchhhhhcccCccccceE
Confidence 4456677776654433211 1133457899999999987765 3566555542 135677
Q ss_pred EeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC----------CeEEEEEeChhHHHHHHHHhcc
Q 035617 138 IANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG----------QKIHYVGHSLGTLIALASFSEG 207 (422)
Q Consensus 138 ~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~----------~~i~l~G~S~Gg~~a~~~~~~~ 207 (422)
++|+-+= .. .+..-++.+.+ +=+..+|.+|++... ..|.++||||||.+|.+++...
T Consensus 137 aVDFnEe-----~t-------Am~G~~l~dQt-EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 137 AVDFNEE-----FT-------AMHGHILLDQT-EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred EEcccch-----hh-------hhccHhHHHHH-HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhh
Confidence 7776540 00 01112333333 234455556654432 3499999999999999988764
Q ss_pred -chhhhHhheeeecch
Q 035617 208 -LQVDKLKSAALLSPI 222 (422)
Q Consensus 208 -~~~~~v~~~v~~~p~ 222 (422)
..++.|..++.++.+
T Consensus 204 n~~~~sVntIITlssP 219 (973)
T KOG3724|consen 204 NEVQGSVNTIITLSSP 219 (973)
T ss_pred hhccchhhhhhhhcCc
Confidence 233578888777754
No 164
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.96 E-value=4.7e-05 Score=73.67 Aligned_cols=136 Identities=20% Similarity=0.038 Sum_probs=85.8
Q ss_pred EECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCC-CeEEEeCCCC--CCCCCCC
Q 035617 74 VTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHG-FDVWIANTRG--TRFSRRH 150 (422)
Q Consensus 74 v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g-~~v~~~d~rG--~G~S~~~ 150 (422)
-.++|...|.+|.-. . ...+.|++|++||.+-...+=.. ...=...|+++| +-|+.+|||= .|.=..+
T Consensus 74 ~~sEDCL~LNIwaP~--~----~a~~~PVmV~IHGG~y~~Gs~s~---~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~ 144 (491)
T COG2272 74 TGSEDCLYLNIWAPE--V----PAEKLPVMVYIHGGGYIMGSGSE---PLYDGSALAARGDVVVVSVNYRLGALGFLDLS 144 (491)
T ss_pred CccccceeEEeeccC--C----CCCCCcEEEEEeccccccCCCcc---cccChHHHHhcCCEEEEEeCcccccceeeehh
Confidence 345677666665543 1 22457999999997432221000 011223488888 9999999983 2322211
Q ss_pred CCCCCCcccccccChHHHHhchHHHHHHHHHHHh---C---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 151 TSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQT---G---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~---~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
.-.+. +......+..|+..+++|+++.. | ++|.|+|+|-||+.++.+++.......++.+|+.|+...
T Consensus 145 ~~~~~------~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 145 SLDTE------DAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred hcccc------ccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 10000 01111134578889999998763 3 789999999999999988877655568999999998764
No 165
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.93 E-value=7.8e-06 Score=74.75 Aligned_cols=48 Identities=17% Similarity=0.081 Sum_probs=40.1
Q ss_pred HHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 175 AVFDHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 175 ~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
+++.+|.+... .+..++|+||||..|+.++.++| +.+.+++++||...
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~P--d~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHP--DLFGAVIAFSGALD 151 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHST--TTESEEEEESEESE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCc--cccccccccCcccc
Confidence 56666767766 33899999999999999999887 89999999998743
No 166
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.93 E-value=1.3e-05 Score=71.58 Aligned_cols=88 Identities=22% Similarity=0.175 Sum_probs=48.7
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHh--CCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILAD--HGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~--~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
+...||++||+.++..+| ..+...+.. ..+.--.+...++....... .-+++..+. .+
T Consensus 3 ~~hLvV~vHGL~G~~~d~------~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T----------~~gI~~~g~----rL 62 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADM------RYLKNHLEKIPEDLPNARIVVLGYSNNEFKT----------FDGIDVCGE----RL 62 (217)
T ss_pred CCEEEEEeCCCCCCHHHH------HHHHHHHHHhhhhcchhhhhhhccccccccc----------chhhHHHHH----HH
Confidence 467899999999999888 344444544 12211122222221111100 113444442 33
Q ss_pred HHHHHHHh---C---CeEEEEEeChhHHHHHHHHhc
Q 035617 177 FDHVYEQT---G---QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 177 i~~i~~~~---~---~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
.+.|.+.. . .+|.+|||||||.++-.+...
T Consensus 63 ~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 63 AEEILEHIKDYESKIRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred HHHHHHhccccccccccceEEEecccHHHHHHHHHH
Confidence 33333332 2 479999999999998776653
No 167
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.88 E-value=0.0014 Score=64.46 Aligned_cols=135 Identities=16% Similarity=0.112 Sum_probs=80.6
Q ss_pred CCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcc---cccCCCCCC-------HHHHHH------hCCCeEEEeC-
Q 035617 78 DGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLT---WLLNPPEQN-------LPLILA------DHGFDVWIAN- 140 (422)
Q Consensus 78 dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~---~~~~~~~~~-------l~~~l~------~~g~~v~~~d- 140 (422)
.+..+.+|+.+... .....|.||++-|.++.+.. |..++|..- -...+. .+-.+++-+|
T Consensus 48 ~~~~lfy~f~es~~----~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDq 123 (433)
T PLN03016 48 ENVQFFYYFIKSEN----NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQ 123 (433)
T ss_pred CCeEEEEEEEecCC----CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecC
Confidence 46678888887654 33567999999999987773 333444210 000111 1126899999
Q ss_pred CCCCCCCCCCCCCCCCcccccccChH-HHHhchHHHHHHHHHHHhC----CeEEEEEeChhHHHHHHHHhcc-c------
Q 035617 141 TRGTRFSRRHTSLDPSQMEFWNWSWD-ELVAYDLPAVFDHVYEQTG----QKIHYVGHSLGTLIALASFSEG-L------ 208 (422)
Q Consensus 141 ~rG~G~S~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~i~~i~~~~~----~~i~l~G~S~Gg~~a~~~~~~~-~------ 208 (422)
.-|.|.|...... ..+-+ +.+ +|+...+....++.+ .+++|.|.|.||..+-.+|..- .
T Consensus 124 PvGtGfSy~~~~~--------~~~~d~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~ 194 (433)
T PLN03016 124 PVGSGFSYSKTPI--------DKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 194 (433)
T ss_pred CCCCCccCCCCCC--------CccCCHHHH-HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhccccc
Confidence 7889999643211 11111 222 455444444444443 7899999999998776665531 0
Q ss_pred -hhhhHhheeeecchhhc
Q 035617 209 -QVDKLKSAALLSPIAYL 225 (422)
Q Consensus 209 -~~~~v~~~v~~~p~~~~ 225 (422)
..-.++++++-+|....
T Consensus 195 ~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 195 EPPINLQGYMLGNPVTYM 212 (433)
T ss_pred CCcccceeeEecCCCcCc
Confidence 01157788888886543
No 168
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.84 E-value=6.2e-05 Score=73.73 Aligned_cols=58 Identities=10% Similarity=0.062 Sum_probs=45.3
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc---------cCchhHHHHHHHHHhhh
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ---------VSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~---------~~~~~v~~~i~~fl~~~ 417 (422)
.|+|++.|.+|..+++. +.+.+++ .. ..+++++.++ |..-. ...++|...|..+|.+.
T Consensus 305 ~PVLFV~Gsnd~mcspn~ME~vreKM--qA----~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 305 QPVLFVIGSNDHMCSPNSMEEVREKM--QA----EVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred CceEEEecCCcccCCHHHHHHHHHHh--hc----cceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 89999999999999999 8888888 44 4789999999 98766 23456666666666554
No 169
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.81 E-value=0.00021 Score=69.93 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=64.8
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCC----eEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGF----DVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDL 173 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~----~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~ 173 (422)
++.|+|+|+||.. |............|.++|. -|+++|..+.. .+.... +.... +.+.+.+
T Consensus 207 ~~~PvlyllDG~~-----w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R~~el-~~~~~-----f~~~l~~-- 271 (411)
T PRK10439 207 EERPLAILLDGQF-----WAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HRSQEL-PCNAD-----FWLAVQQ-- 271 (411)
T ss_pred CCCCEEEEEECHH-----hhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--cccccC-CchHH-----HHHHHHH--
Confidence 4579999999953 3322222334455666673 35777763211 111111 11111 2222323
Q ss_pred HHHHHHHHHHhC-----CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 174 PAVFDHVYEQTG-----QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 174 ~~~i~~i~~~~~-----~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
.++-+|.+... ++.+|.|+||||..|+.++.++| +.+.+++++||..
T Consensus 272 -eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~P--d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 272 -ELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWP--ERFGCVLSQSGSF 323 (411)
T ss_pred -HHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCc--ccccEEEEeccce
Confidence 44455555432 67899999999999999999777 8999999999853
No 170
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.81 E-value=0.0002 Score=66.57 Aligned_cols=66 Identities=15% Similarity=0.238 Sum_probs=50.6
Q ss_pred CCCCCCCccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCch---hHHHHHHHHHhhhc
Q 035617 347 ISNIPHDLPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQ---LKMIAVMALFQRQA 418 (422)
Q Consensus 347 l~~i~~~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~---~v~~~i~~fl~~~~ 418 (422)
+.++. .+|+|+++|.+|..+|.. ..+++.. .. ...+...++++ |........ +.+..+.+|+.+++
T Consensus 227 ~~~i~-~~P~l~~~G~~D~~vp~~~~~~~~~~~--~~---~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKIS-PRPVLLVHGERDEVVPLRDAEDLYEAA--RE---RPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcC-CcceEEEecCCCcccchhhhHHHHhhh--cc---CCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 44444 269999999999999988 7777776 43 13677888999 999873333 78899999998875
No 171
>COG0627 Predicted esterase [General function prediction only]
Probab=97.79 E-value=8e-05 Score=69.70 Aligned_cols=123 Identities=23% Similarity=0.293 Sum_probs=79.5
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCC--------------CCCCCCCCCCCCCCCccccccc
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANT--------------RGTRFSRRHTSLDPSQMEFWNW 163 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~--------------rG~G~S~~~~~~~~~~~~~~~~ 163 (422)
.+-|+++++||...+...|+.. ..+-....+.|..+.++|- .|.+.|--.....+. -..+.|
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~---~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~-~~~~~~ 127 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLL---DGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPP-WASGPY 127 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEec---cchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCc-cccCcc
Confidence 4568888889988887655442 3444455666788888632 243333211111110 011137
Q ss_pred ChHHHHhchHHHHHHHHHHHhCC--eEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 164 SWDELVAYDLPAVFDHVYEQTGQ--KIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 164 ~~~~~~~~D~~~~i~~i~~~~~~--~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
.|..++..++++.++.-.....+ +..++||||||.-|+.+|..+| ++++.+..++|+....
T Consensus 128 q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~p--d~f~~~sS~Sg~~~~s 190 (316)
T COG0627 128 QWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHP--DRFKSASSFSGILSPS 190 (316)
T ss_pred chhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCc--chhceecccccccccc
Confidence 78888888888655543222212 7899999999999999999887 8999999999987544
No 172
>COG3150 Predicted esterase [General function prediction only]
Probab=97.76 E-value=0.00019 Score=59.12 Aligned_cols=90 Identities=19% Similarity=0.212 Sum_probs=58.8
Q ss_pred EEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHH
Q 035617 103 VLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYE 182 (422)
Q Consensus 103 vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~ 182 (422)
||++|||.+|-.+. -+..+.+ .+..|.|-.+.|..+....| .++.+.++-+.+
T Consensus 2 ilYlHGFnSSP~sh--------ka~l~~q----~~~~~~~~i~y~~p~l~h~p---------------~~a~~ele~~i~ 54 (191)
T COG3150 2 ILYLHGFNSSPGSH--------KAVLLLQ----FIDEDVRDIEYSTPHLPHDP---------------QQALKELEKAVQ 54 (191)
T ss_pred eEEEecCCCCcccH--------HHHHHHH----HHhccccceeeecCCCCCCH---------------HHHHHHHHHHHH
Confidence 89999998866553 2222222 24456666777766554332 334455666666
Q ss_pred HhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 183 QTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 183 ~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
+.+ ..+.|+|-|+||..|..++.++- +++ |+++|+..
T Consensus 55 ~~~~~~p~ivGssLGGY~At~l~~~~G----ira-v~~NPav~ 92 (191)
T COG3150 55 ELGDESPLIVGSSLGGYYATWLGFLCG----IRA-VVFNPAVR 92 (191)
T ss_pred HcCCCCceEEeecchHHHHHHHHHHhC----Chh-hhcCCCcC
Confidence 667 77999999999999999887664 443 45777653
No 173
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.69 E-value=0.0001 Score=73.14 Aligned_cols=115 Identities=17% Similarity=0.059 Sum_probs=71.9
Q ss_pred CcEEEecCCCCCCcccccCCCCCCHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 101 PPVLIQHGVLVDGLTWLLNPPEQNLPLILAD-HGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 101 ~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~-~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
.||+|.-|..+........ ..+...|++ .|--|+++++|-+|.|......+.....| .+.++ +.+|+...+++
T Consensus 29 gpifl~~ggE~~~~~~~~~---~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~y--Lt~~Q-ALaD~a~F~~~ 102 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWIN---NGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRY--LTSEQ-ALADLAYFIRY 102 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH----HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC---SHHH-HHHHHHHHHHH
T ss_pred CCEEEEECCCCccchhhhc---CChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHh--cCHHH-HHHHHHHHHHH
Confidence 4555555665555432221 225555554 37789999999999998655444333333 35555 55999999999
Q ss_pred HHHHhC----CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 180 VYEQTG----QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 180 i~~~~~----~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
+.++.. .|++++|-|.||++|..+-.++| +.|.+.++.|++.
T Consensus 103 ~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP--~~~~ga~ASSapv 148 (434)
T PF05577_consen 103 VKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP--HLFDGAWASSAPV 148 (434)
T ss_dssp HHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T--TT-SEEEEET--C
T ss_pred HHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC--CeeEEEEecccee
Confidence 987653 68999999999999998777555 8899998888764
No 174
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.53 E-value=0.0021 Score=60.67 Aligned_cols=123 Identities=15% Similarity=0.054 Sum_probs=84.5
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHH-hCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILA-DHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~-~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
+.||++.-|..++-+.|..+ .++..-++ +.+--++..++|=+|.|...-+..-++.+-..|--.|.+-.|...++.
T Consensus 80 ~gPIffYtGNEGdie~Fa~n---tGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANN---TGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CCceEEEeCCcccHHHHHhc---cchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 48999999999887766443 33333333 346778899999999997644332222222234345556689999999
Q ss_pred HHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheee-ecchhhccc
Q 035617 179 HVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAAL-LSPIAYLSY 227 (422)
Q Consensus 179 ~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~-~~p~~~~~~ 227 (422)
++++..+ .+++.+|-|.||+++..+=.+. |.-|.++.+ .+|..+..+
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY--PHiv~GAlAaSAPvl~f~d 207 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY--PHIVLGALAASAPVLYFED 207 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcC--hhhhhhhhhccCceEeecC
Confidence 9988876 7899999999999988775544 476665544 456554443
No 175
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.51 E-value=0.013 Score=57.58 Aligned_cols=140 Identities=19% Similarity=0.041 Sum_probs=80.2
Q ss_pred EECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccc---cCCCCCCH--HHHHHhC------CCeEEEeCC-
Q 035617 74 VTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWL---LNPPEQNL--PLILADH------GFDVWIANT- 141 (422)
Q Consensus 74 v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~---~~~~~~~l--~~~l~~~------g~~v~~~d~- 141 (422)
+..+.|..|.+|++++.. ....+|.||++-|.+|.+..-. .++|..-- ..-|..+ --+++-+|.
T Consensus 51 v~~~~~~~LFYwf~eS~~----~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~P 126 (454)
T KOG1282|consen 51 VNESEGRQLFYWFFESEN----NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQP 126 (454)
T ss_pred CCCCCCceEEEEEEEccC----CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecC
Confidence 333468899999998875 3356899999999999876421 11110000 0001000 124666664
Q ss_pred CCCCCCCCCCCCCCCccccccc-ChHHHHhchHH-HHHHHHHHHhC----CeEEEEEeChhHHHHHHHHhc----cc---
Q 035617 142 RGTRFSRRHTSLDPSQMEFWNW-SWDELVAYDLP-AVFDHVYEQTG----QKIHYVGHSLGTLIALASFSE----GL--- 208 (422)
Q Consensus 142 rG~G~S~~~~~~~~~~~~~~~~-~~~~~~~~D~~-~~i~~i~~~~~----~~i~l~G~S~Gg~~a~~~~~~----~~--- 208 (422)
.|.|.|-..... ++ +-++-...|.- .+++|+ ++.+ .+++|.|.|.+|...-.+|.+ .+
T Consensus 127 vGvGFSYs~~~~--------~~~~~D~~~A~d~~~FL~~wf-~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~ 197 (454)
T KOG1282|consen 127 VGVGFSYSNTSS--------DYKTGDDGTAKDNYEFLQKWF-EKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCC 197 (454)
T ss_pred CcCCccccCCCC--------cCcCCcHHHHHHHHHHHHHHH-HhChhhcCCCeEEecccccceehHHHHHHHHhcccccc
Confidence 467777432210 11 11222335554 444555 4554 789999999999887776664 11
Q ss_pred hh-hhHhheeeecchhhcc
Q 035617 209 QV-DKLKSAALLSPIAYLS 226 (422)
Q Consensus 209 ~~-~~v~~~v~~~p~~~~~ 226 (422)
.+ -.++++++=+|.....
T Consensus 198 ~~~iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 198 KPNINLKGYAIGNGLTDPE 216 (454)
T ss_pred CCcccceEEEecCcccCcc
Confidence 11 2578888888876543
No 176
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.47 E-value=0.00037 Score=71.14 Aligned_cols=114 Identities=18% Similarity=0.052 Sum_probs=66.8
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCC--CCCCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRG--TRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG--~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
+.|++|++||.+-....= ..+...-...+++++.=|++++||= .|.-.......+ ...++..|...+
T Consensus 124 ~lPV~v~ihGG~f~~G~~--~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~---------~gN~Gl~Dq~~A 192 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSG--SFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP---------SGNYGLLDQRLA 192 (535)
T ss_dssp SEEEEEEE--STTTSSCT--TSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH---------BSTHHHHHHHHH
T ss_pred ccceEEEeecccccCCCc--ccccccccccccCCCEEEEEecccccccccccccccccC---------chhhhhhhhHHH
Confidence 569999999975533321 0011233445677799999999993 121111000000 012255777899
Q ss_pred HHHHHHHh---C---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 177 FDHVYEQT---G---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 177 i~~i~~~~---~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
++||++.. | ++|.|+|||-||..+...+....-...++++|+.|+..
T Consensus 193 L~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 193 LKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred HHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 99998774 3 78999999999999877655433235899999999854
No 177
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.47 E-value=0.0003 Score=61.84 Aligned_cols=84 Identities=26% Similarity=0.161 Sum_probs=55.7
Q ss_pred CCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHH
Q 035617 123 QNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIAL 201 (422)
Q Consensus 123 ~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~ 201 (422)
..++..+.. ++.|+.+|.+|+|.+.... -++.+++. ...+.+.+..+ .+++++|||+||.++.
T Consensus 16 ~~~~~~l~~-~~~v~~~~~~g~~~~~~~~-----------~~~~~~~~----~~~~~l~~~~~~~~~~l~g~s~Gg~~a~ 79 (212)
T smart00824 16 ARLAAALRG-RRDVSALPLPGFGPGEPLP-----------ASADALVE----AQAEAVLRAAGGRPFVLVGHSSGGLLAH 79 (212)
T ss_pred HHHHHhcCC-CccEEEecCCCCCCCCCCC-----------CCHHHHHH----HHHHHHHHhcCCCCeEEEEECHHHHHHH
Confidence 456666755 6899999999998664321 13333332 33444545455 8899999999999998
Q ss_pred HHHhccc-hhhhHhheeeecch
Q 035617 202 ASFSEGL-QVDKLKSAALLSPI 222 (422)
Q Consensus 202 ~~~~~~~-~~~~v~~~v~~~p~ 222 (422)
..+.... ....+.+++++.+.
T Consensus 80 ~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 80 AVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHhCCCCCcEEEEEccC
Confidence 8777522 12367888777653
No 178
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.37 E-value=0.00054 Score=66.74 Aligned_cols=83 Identities=22% Similarity=0.248 Sum_probs=60.5
Q ss_pred CCHHHHHHhCCCeE----E-E-eCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhCCeEEEEEeChh
Q 035617 123 QNLPLILADHGFDV----W-I-ANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTGQKIHYVGHSLG 196 (422)
Q Consensus 123 ~~l~~~l~~~g~~v----~-~-~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~~~i~l~G~S~G 196 (422)
..+++.|.+.||.. + + +|+|=.-. ..+++. .++...|+.+.+..+++++|+|||||
T Consensus 68 ~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-----------------~~~~~~-~~lk~~ie~~~~~~~~kv~li~HSmG 129 (389)
T PF02450_consen 68 AKLIENLEKLGYDRGKDLFAAPYDWRLSPA-----------------ERDEYF-TKLKQLIEEAYKKNGKKVVLIAHSMG 129 (389)
T ss_pred HHHHHHHHhcCcccCCEEEEEeechhhchh-----------------hHHHHH-HHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 67888899888752 2 2 57774210 122323 66778888887766699999999999
Q ss_pred HHHHHHHHhccch----hhhHhheeeecchh
Q 035617 197 TLIALASFSEGLQ----VDKLKSAALLSPIA 223 (422)
Q Consensus 197 g~~a~~~~~~~~~----~~~v~~~v~~~p~~ 223 (422)
|.++..++...+. .+.|+++|.++++.
T Consensus 130 gl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 130 GLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred chHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 9999998887532 24899999999863
No 179
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.31 E-value=0.003 Score=56.85 Aligned_cols=283 Identities=14% Similarity=0.087 Sum_probs=139.3
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
.+.|.||++--.+++....+ ++-.+.|.. ..+|++-||-....- |...+ .|.+++++ +-+..++
T Consensus 101 ~pdPkvLivapmsGH~aTLL-----R~TV~alLp-~~~vyitDW~dAr~V-------p~~~G--~FdldDYI-dyvie~~ 164 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLL-----RGTVEALLP-YHDVYITDWVDARMV-------PLEAG--HFDLDDYI-DYVIEMI 164 (415)
T ss_pred CCCCeEEEEecccccHHHHH-----HHHHHHhcc-ccceeEeecccccee-------ecccC--CccHHHHH-HHHHHHH
Confidence 44679999998888777642 455555554 478999998764322 21111 44444444 2223333
Q ss_pred HHHHHHhCCeEEEEEeChhHHHHHHHHhc---cchhhhHhheeeecchhhccchhhHHHHHHhhhcHHHHHHHhcCcccc
Q 035617 178 DHVYEQTGQKIHYVGHSLGTLIALASFSE---GLQVDKLKSAALLSPIAYLSYMRTALGVIAAKSFVGEITTLLGLAEFN 254 (422)
Q Consensus 178 ~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~---~~~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 254 (422)
+++ |..+++++-|+-+.-.+++.+. ...+..-.++++++.+............+.....+.......-..--.
T Consensus 165 ~~~----Gp~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~ 240 (415)
T COG4553 165 NFL----GPDAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPP 240 (415)
T ss_pred HHh----CCCCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCC
Confidence 333 5668999999887655543332 222245678999887766554444444444333333222211000001
Q ss_pred CCChhHH-------HHHHHhccCC--cc-chhhhhhhhcCCCCCCCch---hhhhhhhcC--CCcchHHHHHHHHHHHhc
Q 035617 255 PKGKPVA-------DFLKSLCTNP--VV-NCYDLLTSLTGRNCCLNSS---TVDLFLRNE--PQSTSTKNMVHLAQTVRD 319 (422)
Q Consensus 255 p~~~~~~-------~~~~~~~~~~--~~-~~~~~~~~~~g~~~~~~~~---~~~~~~~~~--~~~~s~~~~~~~~~~~~~ 319 (422)
|...+.| ++...+.-+. ++ .-.+++..+...+....+. -.+.|+.-+ +...-.+++...
T Consensus 241 ~ypg~gR~VYPGFlQlagFmsmNldrH~~aH~~~~~~Lv~~D~~~Ae~h~~FYdEYlavmdl~aEfYLqTid~V------ 314 (415)
T COG4553 241 PYPGFGRRVYPGFLQLAGFMSMNLDRHIDAHKDFFLSLVKNDGDSAEKHREFYDEYLAVMDLTAEFYLQTIDEV------ 314 (415)
T ss_pred CCCCccccccccHHHhhhHhhcChhhhHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHccchHHHHHHHHHHH------
Confidence 1111111 1111111000 11 1112222222222111111 122222221 111112222222
Q ss_pred CCeeeecCCCCCccccccCCCCCccccCCCCCCCccEEEEEeCCCccCChh-----HHHHHHhcccCCCCCceeeEEcCC
Q 035617 320 GVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADLT-----QYLLYLCKLFSKSGESLNLICVMS 394 (422)
Q Consensus 320 ~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~-----~~l~~~l~~~~~~~~~~~~~~i~~ 394 (422)
|+++... ..++.+-+.. .+.+.|+ ++-.+-+-||+|.+...- ..+...+ |. ..++.+.=|+
T Consensus 315 --Fqq~~Lp--kG~~vhrg~~----vdp~~I~-~~aL~tvEGEnDDIsgvGQTkAA~~LC~nI--pe---~mk~hy~qp~ 380 (415)
T COG4553 315 --FQQHALP--KGEMVHRGKP----VDPTAIT-NVALFTVEGENDDISGVGQTKAAHDLCSNI--PE---DMKQHYMQPD 380 (415)
T ss_pred --HHHhccc--CCceeecCCc----CChhhee-ceeEEEeecccccccccchhHHHHHHHhcC--hH---HHHHHhcCCC
Confidence 2222111 1223222222 2455666 577888999999997665 4445555 44 2345556688
Q ss_pred C-ccccc---cCchhHHHHHHHHHhhhcCc
Q 035617 395 K-SLSFQ---VSPQLKMIAVMALFQRQASM 420 (422)
Q Consensus 395 ~-H~~~~---~~~~~v~~~i~~fl~~~~~~ 420 (422)
. |...+ .-+++++..|.+|+.++...
T Consensus 381 vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 381 VGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred CCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 8 99988 55789999999999988654
No 180
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.29 E-value=0.00098 Score=58.05 Aligned_cols=68 Identities=19% Similarity=0.175 Sum_probs=49.5
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhc
Q 035617 134 FDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 134 ~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
-+||++=||-.....-....... .-...+++..|+.++.++-++..+ .+++|+|||+|+.+...++.+
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~-----~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDRED-----AEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred CccccChhhcchhhhhhccCcch-----hHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 58999999875433221011111 123456778999999999888887 799999999999999998876
No 181
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.28 E-value=0.0017 Score=57.86 Aligned_cols=101 Identities=22% Similarity=0.190 Sum_probs=66.7
Q ss_pred CcEEEecCCCCCCcccccCCCCCCHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 101 PPVLIQHGVLVDGLTWLLNPPEQNLPLILADH-GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 101 ~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~-g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
.|+|++||++++..+. ....+.+.+.+. |..|+..|. |-| -+... -.... +.+..+-+.
T Consensus 24 ~P~ii~HGigd~c~~~----~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~---------l~pl~----~Qv~~~ce~ 83 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSL----SMANLTQLLEELPGSPVYCLEI-GDG--IKDSS---------LMPLW----EQVDVACEK 83 (296)
T ss_pred CCEEEEeccCcccccc----hHHHHHHHHHhCCCCeeEEEEe-cCC--cchhh---------hccHH----HHHHHHHHH
Confidence 5888999999988762 136677777664 778888885 333 10000 11122 333455566
Q ss_pred HHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 180 VYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 180 i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
+..... +-.+++|.|+||.++-.++...+. ..|+.+|.++.+
T Consensus 84 v~~m~~lsqGynivg~SQGglv~Raliq~cd~-ppV~n~ISL~gP 127 (296)
T KOG2541|consen 84 VKQMPELSQGYNIVGYSQGGLVARALIQFCDN-PPVKNFISLGGP 127 (296)
T ss_pred HhcchhccCceEEEEEccccHHHHHHHHhCCC-CCcceeEeccCC
Confidence 654333 779999999999999998887653 368888888754
No 182
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.24 E-value=0.0048 Score=54.18 Aligned_cols=76 Identities=22% Similarity=0.298 Sum_probs=50.9
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHH-hCCCeEE-EeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILA-DHGFDVW-IANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~-~~g~~v~-~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
+..||++.|++.+...+.. |. ..+|+|+ ++|||--- .|.
T Consensus 11 ~~LilfF~GWg~d~~~f~h----------L~~~~~~D~l~~yDYr~l~-------------------------~d~---- 51 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSH----------LILPENYDVLICYDYRDLD-------------------------FDF---- 51 (213)
T ss_pred CeEEEEEecCCCChHHhhh----------ccCCCCccEEEEecCcccc-------------------------ccc----
Confidence 5799999999998776521 31 2367755 45888421 111
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
+ + .+ +.|.||++|||-.+|..+.... .++..++++.-
T Consensus 52 ~-~---~~y~~i~lvAWSmGVw~A~~~l~~~----~~~~aiAINGT 89 (213)
T PF04301_consen 52 D-L---SGYREIYLVAWSMGVWAANRVLQGI----PFKRAIAINGT 89 (213)
T ss_pred c-c---ccCceEEEEEEeHHHHHHHHHhccC----CcceeEEEECC
Confidence 1 1 14 8999999999999998876643 36677777743
No 183
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.22 E-value=0.0011 Score=66.05 Aligned_cols=90 Identities=19% Similarity=0.174 Sum_probs=62.2
Q ss_pred CCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHH
Q 035617 123 QNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIAL 201 (422)
Q Consensus 123 ~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~ 201 (422)
..+++.|++.||+ --|++|..+-.+....... .-+++. ..+...|+.+.+..+ ++++|+||||||.+++
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le-------~rd~YF-~rLK~lIE~ay~~nggkKVVLV~HSMGglv~l 228 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTE-------VRDQTL-SRLKSNIELMVATNGGKKVVVVPHSMGVLYFL 228 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchh-------hhhHHH-HHHHHHHHHHHHHcCCCeEEEEEeCCchHHHH
Confidence 4788889999997 4566665544332211110 112223 678899999988876 8999999999999999
Q ss_pred HHHhccc-------------hhhhHhheeeecch
Q 035617 202 ASFSEGL-------------QVDKLKSAALLSPI 222 (422)
Q Consensus 202 ~~~~~~~-------------~~~~v~~~v~~~p~ 222 (422)
.++..-+ ..+.|++.|.++++
T Consensus 229 yFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 229 HFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 8766311 22489999999986
No 184
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.21 E-value=0.0031 Score=59.91 Aligned_cols=104 Identities=20% Similarity=0.127 Sum_probs=77.2
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccC---hHHHHhchHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWS---WDELVAYDLP 174 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~---~~~~~~~D~~ 174 (422)
..+|+|+.--|++.+..-. +..+.+.| + -+-+.+++|=+|.|...+. +|+ +.+ +..|..
T Consensus 61 ~drPtV~~T~GY~~~~~p~-----r~Ept~Ll-d--~NQl~vEhRfF~~SrP~p~---------DW~~Lti~Q-AA~D~H 122 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPR-----RSEPTQLL-D--GNQLSVEHRFFGPSRPEPA---------DWSYLTIWQ-AASDQH 122 (448)
T ss_pred CCCCeEEEecCcccccCcc-----ccchhHhh-c--cceEEEEEeeccCCCCCCC---------CcccccHhH-hhHHHH
Confidence 4689999999998865432 34555555 2 3678999999999986442 443 444 559999
Q ss_pred HHHHHHHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHhheeeecc
Q 035617 175 AVFDHVYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSP 221 (422)
Q Consensus 175 ~~i~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p 221 (422)
.+++.++...+++-+-.|-|-||++++.+=..+| +.|++.|.-..
T Consensus 123 ri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP--~DVD~tVaYVA 167 (448)
T PF05576_consen 123 RIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYP--DDVDGTVAYVA 167 (448)
T ss_pred HHHHHHHhhccCCceecCcCCCceeEEEEeeeCC--CCCCeeeeeec
Confidence 9999997777788899999999999988655455 78887776543
No 185
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.07 E-value=0.0071 Score=57.75 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=48.0
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhhh
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~~ 417 (422)
+|-++|.|.+|....+. ...++.| +. .+.+..+|++ |..-. ..+.+.+..|++..
T Consensus 263 ~PK~ii~atgDeFf~pD~~~~y~d~L--~G----~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 263 MPKYIINATGDEFFVPDSSNFYYDKL--PG----EKYLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred ccEEEEecCCCceeccCchHHHHhhC--CC----CeeEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 89999999999997777 9999999 86 5889999999 98765 77888899998874
No 186
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.05 E-value=0.004 Score=61.35 Aligned_cols=140 Identities=17% Similarity=0.107 Sum_probs=83.7
Q ss_pred EECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCC--HH-----------HHHHhCCCeEEEeC
Q 035617 74 VTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQN--LP-----------LILADHGFDVWIAN 140 (422)
Q Consensus 74 v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~--l~-----------~~l~~~g~~v~~~d 140 (422)
+....+..+.+|+++... ....+|.||++.|.+++++.|........ +. .-+.+ -.+|+.+|
T Consensus 18 ~~~~~~~~lfyw~~~s~~----~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD 92 (415)
T PF00450_consen 18 VNDNENAHLFYWFFESRN----DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFID 92 (415)
T ss_dssp ECTTTTEEEEEEEEE-SS----GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE-
T ss_pred cCCCCCcEEEEEEEEeCC----CCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEEe
Confidence 333467788888887765 34668999999999998887643221100 00 01112 36899999
Q ss_pred -CCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC----CeEEEEEeChhHHHHHHHHhc----cch--
Q 035617 141 -TRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG----QKIHYVGHSLGTLIALASFSE----GLQ-- 209 (422)
Q Consensus 141 -~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~----~~i~l~G~S~Gg~~a~~~~~~----~~~-- 209 (422)
.-|.|.|....... . .++.++.+ +|+..++.....+.+ .+++|.|.|.||..+..+|.. ...
T Consensus 93 ~PvGtGfS~~~~~~~----~--~~~~~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~ 165 (415)
T PF00450_consen 93 QPVGTGFSYGNDPSD----Y--VWNDDQAA-EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGD 165 (415)
T ss_dssp -STTSTT-EESSGGG----G--S-SHHHHH-HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--
T ss_pred ecCceEEeecccccc----c--cchhhHHH-HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccc
Confidence 55999997633211 0 33555545 676666665556655 599999999999987766554 110
Q ss_pred --hhhHhheeeecchhhc
Q 035617 210 --VDKLKSAALLSPIAYL 225 (422)
Q Consensus 210 --~~~v~~~v~~~p~~~~ 225 (422)
.-.++++++-+|....
T Consensus 166 ~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 166 QPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp STTSEEEEEEEESE-SBH
T ss_pred ccccccccceecCccccc
Confidence 1257899999987654
No 187
>PLN02606 palmitoyl-protein thioesterase
Probab=97.00 E-value=0.0025 Score=58.54 Aligned_cols=102 Identities=15% Similarity=0.143 Sum_probs=61.4
Q ss_pred CcEEEecCCCCCCcccccCCCCCCHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 101 PPVLIQHGVLVDGLTWLLNPPEQNLPLILADH-GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 101 ~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~-g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
.|||+.||++++...- ....+.+.+.+. |+-+..+. .|-+... .|+ -... +.+..+-+.
T Consensus 27 ~PvViwHGlgD~~~~~----~~~~~~~~i~~~~~~pg~~v~-ig~~~~~----------s~~-~~~~----~Qv~~vce~ 86 (306)
T PLN02606 27 VPFVLFHGFGGECSNG----KVSNLTQFLINHSGYPGTCVE-IGNGVQD----------SLF-MPLR----QQASIACEK 86 (306)
T ss_pred CCEEEECCCCcccCCc----hHHHHHHHHHhCCCCCeEEEE-ECCCccc----------ccc-cCHH----HHHHHHHHH
Confidence 5899999998544431 125677777533 66554444 3322110 000 0222 223345555
Q ss_pred HHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 180 VYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 180 i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
+.+... +-++++|+|+||.++-.++.+.+....|+.+|.++..
T Consensus 87 l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 87 IKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred HhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 544322 6799999999999999998876531269999998864
No 188
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.93 E-value=0.0033 Score=59.36 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=65.1
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
.-.-||.-|=++.... .+.++..|+++|+.|+-+|-.-|=.|.+ +-++ ...|+..++++
T Consensus 260 d~~av~~SGDGGWr~l------Dk~v~~~l~~~gvpVvGvdsLRYfW~~r--------------tPe~-~a~Dl~r~i~~ 318 (456)
T COG3946 260 DTVAVFYSGDGGWRDL------DKEVAEALQKQGVPVVGVDSLRYFWSER--------------TPEQ-IAADLSRLIRF 318 (456)
T ss_pred ceEEEEEecCCchhhh------hHHHHHHHHHCCCceeeeehhhhhhccC--------------CHHH-HHHHHHHHHHH
Confidence 3445666665554443 4788999999999999999776666654 2233 34899999999
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHh
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~ 205 (422)
-.++.+ .++.|+|+|+|+=+.-.+..
T Consensus 319 y~~~w~~~~~~liGySfGADvlP~~~n 345 (456)
T COG3946 319 YARRWGAKRVLLIGYSFGADVLPFAYN 345 (456)
T ss_pred HHHhhCcceEEEEeecccchhhHHHHH
Confidence 999999 99999999999988765444
No 189
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.91 E-value=0.0044 Score=59.14 Aligned_cols=116 Identities=17% Similarity=0.086 Sum_probs=78.0
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEE--eCCCCCCCCCCC-C-----------------------
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWI--ANTRGTRFSRRH-T----------------------- 151 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~--~d~rG~G~S~~~-~----------------------- 151 (422)
..+..|+++.|++++...-+ +..+.+.+|+ -|+|++ +|+-|.|.-... +
T Consensus 33 e~kaIvfiI~GfG~dan~~~----~d~~r~~iA~-~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~L~~i~i~~ 107 (403)
T PF11144_consen 33 EIKAIVFIIPGFGADANSNY----LDFMREYIAK-KFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKSLEKINIDS 107 (403)
T ss_pred CceEEEEEeCCcCCCcchHH----HHHHHHHHHH-hCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHHHHHcCccc
Confidence 45778999999999888522 2566777877 476555 467776522110 0
Q ss_pred ---------------------------------------CCCCCcccccccChHHHHhchHHHHHHHHHHHhC---C--e
Q 035617 152 ---------------------------------------SLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG---Q--K 187 (422)
Q Consensus 152 ---------------------------------------~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~---~--~ 187 (422)
+..|+..+|-+ +.-|.+-|+..++.++.+..+ . |
T Consensus 108 ~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN--~GIMqAiD~INAl~~l~k~~~~~~~~lp 185 (403)
T PF11144_consen 108 ESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQN--FGIMQAIDIINALLDLKKIFPKNGGGLP 185 (403)
T ss_pred cccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhh--hHHHHHHHHHHHHHHHHHhhhcccCCCc
Confidence 00133344443 344556889999999988875 4 8
Q ss_pred EEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 188 IHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 188 i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
+.++|+|.||.+|..+|.-.| ..+++++=-|.+
T Consensus 186 ~I~~G~s~G~yla~l~~k~aP--~~~~~~iDns~~ 218 (403)
T PF11144_consen 186 KIYIGSSHGGYLAHLCAKIAP--WLFDGVIDNSSY 218 (403)
T ss_pred EEEEecCcHHHHHHHHHhhCc--cceeEEEecCcc
Confidence 999999999999999887666 567776644443
No 190
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.82 E-value=0.0035 Score=48.63 Aligned_cols=56 Identities=14% Similarity=0.052 Sum_probs=49.1
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHhh
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQR 416 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~~ 416 (422)
.|+|++.++.|+.+|.+ +.+.+.+ ++ .+++.+++. |..+.....-+.+.+.+||.+
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l--~~-----s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARL--PG-----SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHC--CC-----ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 79999999999999999 9999999 87 789999999 999865556677888888875
No 191
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.79 E-value=0.0051 Score=56.64 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=62.9
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADH-GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~-g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
..|+|+.||++++...- ....+.+.+.+. |..|..+.. |.+.. ..| --...+. +..+-+
T Consensus 25 ~~P~ViwHG~GD~c~~~----g~~~~~~l~~~~~g~~~~~i~i---g~~~~--------~s~-~~~~~~Q----ve~vce 84 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDA----TNANFTQLLTNLSGSPGFCLEI---GNGVG--------DSW-LMPLTQQ----AEIACE 84 (314)
T ss_pred CCCeEEecCCCcccCCc----hHHHHHHHHHhCCCCceEEEEE---CCCcc--------ccc-eeCHHHH----HHHHHH
Confidence 35899999998876651 134566666442 566665543 22211 011 1122232 334444
Q ss_pred HHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 179 HVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 179 ~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
.+.+... +-++++|+|+||.++-.++.+.+....|+.+|.++..
T Consensus 85 ~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 85 KVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred HHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 4544322 6799999999999999998876521269999999864
No 192
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.76 E-value=0.15 Score=45.60 Aligned_cols=56 Identities=16% Similarity=0.069 Sum_probs=45.1
Q ss_pred EEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCCccccc-cCchhHHHHHHHHHhhhc
Q 035617 356 LFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSKSLSFQ-VSPQLKMIAVMALFQRQA 418 (422)
Q Consensus 356 vlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~H~~~~-~~~~~v~~~i~~fl~~~~ 418 (422)
+.++.+++|..+|.. ..+.+.. |+ +++..++++|..-. -..+.+-.+|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~W--Pg-----~eVr~~egGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIW--PG-----CEVRYLEGGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhC--CC-----CEEEEeecCceeeeehhchHHHHHHHHHHHhhh
Confidence 677889999999988 8888888 88 77777775576655 677888888998887754
No 193
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.68 E-value=0.0035 Score=52.53 Aligned_cols=53 Identities=23% Similarity=0.190 Sum_probs=35.9
Q ss_pred chHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccch--hhhHhheeeecchh
Q 035617 171 YDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQ--VDKLKSAALLSPIA 223 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~--~~~v~~~v~~~p~~ 223 (422)
.++...++....+.+ .+|+++||||||.+|..++..... ...+..++.++|+.
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 444555555555556 999999999999999988775321 12455666666654
No 194
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.55 E-value=0.021 Score=55.63 Aligned_cols=121 Identities=15% Similarity=0.032 Sum_probs=86.5
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
...|.-|++-|=+.-...|..+. ...+..+-.+.|-.|+.+++|-+|.|......+-+..+ -.+..+.. +|+...|
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~-~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk--~LSs~QAL-aDla~fI 159 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNE-NLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLK--YLSSLQAL-ADLAEFI 159 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccC-cchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchh--hhhHHHHH-HHHHHHH
Confidence 34577777777666666775443 24566666777999999999999999654433322222 22455544 9999999
Q ss_pred HHHHHHhC--C--eEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 178 DHVYEQTG--Q--KIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 178 ~~i~~~~~--~--~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
+.+..+.+ . +.+..|-|.-|.++..+=...| +.|.+.|+.|.+..
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP--el~~GsvASSapv~ 208 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYP--ELTVGSVASSAPVL 208 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCc--hhheeeccccccee
Confidence 99988886 3 8999999999999877655444 88888888876643
No 195
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.55 E-value=0.013 Score=57.32 Aligned_cols=127 Identities=19% Similarity=0.125 Sum_probs=81.7
Q ss_pred CCCCCcEEEecCCCCCCcccccCC---C---------CC--CHHHHHHhCCCeEEEeC-CCCCCCCCCCCCCCCCccccc
Q 035617 97 QIKRPPVLIQHGVLVDGLTWLLNP---P---------EQ--NLPLILADHGFDVWIAN-TRGTRFSRRHTSLDPSQMEFW 161 (422)
Q Consensus 97 ~~~~~~vll~HG~~~~~~~~~~~~---~---------~~--~l~~~l~~~g~~v~~~d-~rG~G~S~~~~~~~~~~~~~~ 161 (422)
..++|.|+++.|.++++..|...+ | .. .-..++ +. -+++.+| --|.|+|..... ....
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~-~~-adLvFiDqPvGTGfS~a~~~--e~~~--- 170 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWL-DF-ADLVFIDQPVGTGFSRALGD--EKKK--- 170 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccc-cC-CceEEEecCcccCccccccc--cccc---
Confidence 356899999999999999876541 1 00 011112 21 3788899 789999985211 1111
Q ss_pred ccChHHHHhchHHHHHHHHHHHhC------CeEEEEEeChhHHHHHHHHhccc-hhhhHhheeeecchhhccc-hhhHHH
Q 035617 162 NWSWDELVAYDLPAVFDHVYEQTG------QKIHYVGHSLGTLIALASFSEGL-QVDKLKSAALLSPIAYLSY-MRTALG 233 (422)
Q Consensus 162 ~~~~~~~~~~D~~~~i~~i~~~~~------~~i~l~G~S~Gg~~a~~~~~~~~-~~~~v~~~v~~~p~~~~~~-~~~~~~ 233 (422)
+... +..|+..+.+.+.+.+. .+.+|+|.|.||.-+..+|..-. .....++.+.++++..... ...|+.
T Consensus 171 --d~~~-~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~t~Pl~ 247 (498)
T COG2939 171 --DFEG-AGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLWTDPLT 247 (498)
T ss_pred --chhc-cchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcccChhH
Confidence 2222 33788888877777653 48999999999999888776421 0014678888888766655 444543
No 196
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.48 E-value=0.11 Score=49.19 Aligned_cols=61 Identities=8% Similarity=0.063 Sum_probs=46.8
Q ss_pred CccEEEEEeCCCccCChh--HHHHHHhcccCCC----------C---------C-ceeeEEcCCC-ccccccCchhHHHH
Q 035617 353 DLPLFVSYGGNDALADLT--QYLLYLCKLFSKS----------G---------E-SLNLICVMSK-SLSFQVSPQLKMIA 409 (422)
Q Consensus 353 ~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~----------~---------~-~~~~~~i~~~-H~~~~~~~~~v~~~ 409 (422)
.++|||..|+.|.+|+.- +++.+.+ .-.+ + . ...+..+.++ |+.. .+|+...+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L--~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m 309 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSL--NYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIM 309 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhc--CCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHH
Confidence 379999999999999998 7777777 4100 0 0 1445566789 9996 699999999
Q ss_pred HHHHHhh
Q 035617 410 VMALFQR 416 (422)
Q Consensus 410 i~~fl~~ 416 (422)
+-+|++.
T Consensus 310 ~~~fi~~ 316 (319)
T PLN02213 310 FQRWISG 316 (319)
T ss_pred HHHHHcC
Confidence 9999965
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.47 E-value=0.06 Score=48.59 Aligned_cols=59 Identities=25% Similarity=0.420 Sum_probs=41.2
Q ss_pred hHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 165 WDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 165 ~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
+.+...+++.-.|+.-.. ++ ++-.++|||+||.+++.+.-.+| +.+....+.||.....
T Consensus 116 f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGLfvl~aLL~~p--~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 116 FREFLTEQLKPFIEARYR-TNSERTAIIGHSLGGLFVLFALLTYP--DCFGRYGLISPSLWWH 175 (264)
T ss_pred HHHHHHHhhHHHHhcccc-cCcccceeeeecchhHHHHHHHhcCc--chhceeeeecchhhhC
Confidence 344444444444443211 23 77999999999999999888665 7899999999976443
No 198
>PLN02209 serine carboxypeptidase
Probab=96.45 E-value=0.057 Score=53.33 Aligned_cols=140 Identities=16% Similarity=0.104 Sum_probs=83.1
Q ss_pred EECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCccccc---CCCCCCHH-------HHHHh------CCCeEE
Q 035617 74 VTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLL---NPPEQNLP-------LILAD------HGFDVW 137 (422)
Q Consensus 74 v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~---~~~~~~l~-------~~l~~------~g~~v~ 137 (422)
|....|..+.+|+..... .....|.|+++-|.++.+..+.. ++|..--. ..+.. +-.+++
T Consensus 46 v~~~~~~~lf~~f~es~~----~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 46 IGEEENVQFFYYFIKSDK----NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred ecCCCCeEEEEEEEecCC----CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 333446778888887664 33557999999999998876522 22221000 01111 125789
Q ss_pred EeC-CCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC----CeEEEEEeChhHHHHHHHHhcc-c---
Q 035617 138 IAN-TRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG----QKIHYVGHSLGTLIALASFSEG-L--- 208 (422)
Q Consensus 138 ~~d-~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~----~~i~l~G~S~Gg~~a~~~~~~~-~--- 208 (422)
-+| .-|.|.|....... .-+-++.+ +|+-.++....+..+ .+++|.|.|.||.-+-.+|..- .
T Consensus 122 fiDqPvGtGfSy~~~~~~-------~~~~~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~ 193 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIE-------RTSDTSEV-KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNY 193 (437)
T ss_pred EecCCCCCCccCCCCCCC-------ccCCHHHH-HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcc
Confidence 999 77899985422100 00112223 566555555555554 5899999999998776665531 1
Q ss_pred ---h-hhhHhheeeecchhhc
Q 035617 209 ---Q-VDKLKSAALLSPIAYL 225 (422)
Q Consensus 209 ---~-~~~v~~~v~~~p~~~~ 225 (422)
. .-.++++++.+|....
T Consensus 194 ~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 194 ICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred cccCCceeeeeEEecCcccCh
Confidence 0 0156788888886543
No 199
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.38 E-value=0.0031 Score=57.50 Aligned_cols=106 Identities=17% Similarity=0.133 Sum_probs=48.4
Q ss_pred CCcEEEecCCCCCCcc-cccCCCCCCHHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 100 RPPVLIQHGVLVDGLT-WLLNPPEQNLPLILADH--GFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~-~~~~~~~~~l~~~l~~~--g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
..|||+.||++++... .. ...+.+.+.+. |--|..++. |.+.++- ... ++-.-+.+.+..+
T Consensus 5 ~~PvViwHGmGD~~~~~~~----m~~i~~~i~~~~PG~yV~si~i-g~~~~~D------~~~-----s~f~~v~~Qv~~v 68 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSS----MGSIKELIEEQHPGTYVHSIEI-GNDPSED------VEN-----SFFGNVNDQVEQV 68 (279)
T ss_dssp S--EEEE--TT--S--TTT----HHHHHHHHHHHSTT--EEE--S-SSSHHHH------HHH-----HHHSHHHHHHHHH
T ss_pred CCcEEEEEcCccccCChhH----HHHHHHHHHHhCCCceEEEEEE-CCCcchh------hhh-----hHHHHHHHHHHHH
Confidence 4689999999886532 10 12333334332 556666665 2221100 000 1111111223344
Q ss_pred HHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 177 FDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 177 i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
-+.+.+... +-++++|+|+||.+.-.++.+.+. ..|+.+|.++..
T Consensus 69 c~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~-~~V~nlISlggp 115 (279)
T PF02089_consen 69 CEQLANDPELANGFNAIGFSQGGLFLRAYVQRCND-PPVHNLISLGGP 115 (279)
T ss_dssp HHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TS-S-EEEEEEES--
T ss_pred HHHHhhChhhhcceeeeeeccccHHHHHHHHHCCC-CCceeEEEecCc
Confidence 444444333 679999999999999999887642 279999999864
No 200
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.28 E-value=0.0082 Score=49.26 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=27.0
Q ss_pred chHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhc
Q 035617 171 YDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
+.+...++.+.++.+ .+|.+.|||+||++|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 344455555555656 799999999999999887775
No 201
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.25 E-value=0.0054 Score=54.72 Aligned_cols=50 Identities=16% Similarity=0.150 Sum_probs=35.1
Q ss_pred HHHHHHHHhCCeEEEEEeChhHHHHHHHHhcc--chhhhHhheeeecchhhc
Q 035617 176 VFDHVYEQTGQKIHYVGHSLGTLIALASFSEG--LQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 176 ~i~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~--~~~~~v~~~v~~~p~~~~ 225 (422)
.++.+.+..++++.+.|||.||.+|.+++... +..++|..+....++...
T Consensus 74 yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 74 YLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 33334333346699999999999999988863 233588888877766544
No 202
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.10 E-value=0.063 Score=46.38 Aligned_cols=114 Identities=16% Similarity=0.183 Sum_probs=66.2
Q ss_pred CCCCcEEEecCCCC-CCccccc---------CCCCCCHHHHHHhCCCeEEEeCCCCC---CCCCCCCCCCCCcccccccC
Q 035617 98 IKRPPVLIQHGVLV-DGLTWLL---------NPPEQNLPLILADHGFDVWIANTRGT---RFSRRHTSLDPSQMEFWNWS 164 (422)
Q Consensus 98 ~~~~~vll~HG~~~-~~~~~~~---------~~~~~~l~~~l~~~g~~v~~~d~rG~---G~S~~~~~~~~~~~~~~~~~ 164 (422)
.++..+||+||.+- ..+.|-. .+....+.+.-.+.||.|++.|---. -.+... | ..|.. +
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~n----p--~kyir-t 171 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRN----P--QKYIR-T 171 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccC----c--chhcc-c
Confidence 45679999999865 2233421 01112345556677999999975421 111111 1 11111 2
Q ss_pred hHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 165 WDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 165 ~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
-.+.+ .-+-.++..... ..++++.||.||...+.+..+.+..++|.++.+-..+
T Consensus 172 ~veh~----~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 172 PVEHA----KYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred hHHHH----HHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 22222 233344444445 8999999999999999998887655677766655543
No 203
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.68 E-value=0.027 Score=50.60 Aligned_cols=52 Identities=19% Similarity=0.101 Sum_probs=33.1
Q ss_pred chHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccch---hhhHhheeeecch
Q 035617 171 YDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQ---VDKLKSAALLSPI 222 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~---~~~v~~~v~~~p~ 222 (422)
.++...+..++++.+ .+|.+.||||||++|..++..... ...+..+..-+|.
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 444455555555555 899999999999999987774210 1235544444444
No 204
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.67 E-value=0.025 Score=54.80 Aligned_cols=52 Identities=21% Similarity=0.249 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccch------hhhHhheeeecch
Q 035617 171 YDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQ------VDKLKSAALLSPI 222 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~------~~~v~~~v~~~p~ 222 (422)
.++...++...+..+ +|++|++|||||.+.+.++...+. .+.|++++.+++.
T Consensus 166 ~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 166 SKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 677889999988888 999999999999999999887653 2478888887754
No 205
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.54 E-value=0.49 Score=42.36 Aligned_cols=102 Identities=21% Similarity=0.125 Sum_probs=60.4
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
++.+|=|+-|..-.+ .++..|+.+.+.|+++||.|++.=+.- |.- -+....-+......+++
T Consensus 16 P~gvihFiGGaf~ga---~P~itYr~lLe~La~~Gy~ViAtPy~~-tfD--------------H~~~A~~~~~~f~~~~~ 77 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGA---APQITYRYLLERLADRGYAVIATPYVV-TFD--------------HQAIAREVWERFERCLR 77 (250)
T ss_pred CCEEEEEcCcceecc---CcHHHHHHHHHHHHhCCcEEEEEecCC-CCc--------------HHHHHHHHHHHHHHHHH
Confidence 455666666643322 133446889999999999999987653 100 11111112223334455
Q ss_pred HHHHHhC-----CeEEEEEeChhHHHHHHHHhccchhhhHhheeeec
Q 035617 179 HVYEQTG-----QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLS 220 (422)
Q Consensus 179 ~i~~~~~-----~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~ 220 (422)
.+.+..+ -+++=+|||||+-+-+.+.+..+ ..-++-+++|
T Consensus 78 ~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~--~~r~gniliS 122 (250)
T PF07082_consen 78 ALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFD--VERAGNILIS 122 (250)
T ss_pred HHHHhcCCCcccCCeeeeecccchHHHHHHhhhcc--CcccceEEEe
Confidence 5544433 36788999999999888776543 2335666666
No 206
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.45 E-value=0.089 Score=53.95 Aligned_cols=113 Identities=18% Similarity=0.085 Sum_probs=67.7
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC--C-CCCCCCCCCCCcccccccChHHHHhchHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGT--R-FSRRHTSLDPSQMEFWNWSWDELVAYDLPAV 176 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~--G-~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 176 (422)
.|++|++||.+-....-... ........+.....-|+++++|=- | .|.+.... +. ++.+ .|...+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~-~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~-~g-----N~gl-----~Dq~~A 179 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSF-EIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA-PG-----NLGL-----FDQLLA 179 (545)
T ss_pred CCEEEEEeCCceeeccccch-hhcCchhccccCCEEEEEecccceeceeeecCCCCC-CC-----cccH-----HHHHHH
Confidence 79999999985432220000 012333345555677888888831 2 12221111 11 3333 466688
Q ss_pred HHHHHHHh----C--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 177 FDHVYEQT----G--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 177 i~~i~~~~----~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
++|+.+.. | ++|.|+|||-||+.+...+........+..+|.+|..+.
T Consensus 180 L~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 180 LRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 99987774 2 789999999999998776554332357777777776543
No 207
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.28 E-value=0.036 Score=47.74 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=40.4
Q ss_pred HhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhc----cchhhhHhheeeecchh
Q 035617 169 VAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSE----GLQVDKLKSAALLSPIA 223 (422)
Q Consensus 169 ~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~----~~~~~~v~~~v~~~p~~ 223 (422)
+..++...++....+-+ .+|+|+|+|+|+.++..++.. ....++|.++++++-+.
T Consensus 63 G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 63 GVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 33566666666656656 899999999999999998876 22335888989888544
No 208
>PLN02454 triacylglycerol lipase
Probab=95.13 E-value=0.03 Score=54.05 Aligned_cols=38 Identities=26% Similarity=0.315 Sum_probs=29.2
Q ss_pred HhchHHHHHHHHHHHhC-C--eEEEEEeChhHHHHHHHHhc
Q 035617 169 VAYDLPAVFDHVYEQTG-Q--KIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 169 ~~~D~~~~i~~i~~~~~-~--~i~l~G~S~Gg~~a~~~~~~ 206 (422)
+.+++.+.++.+.+..+ . +|++.||||||++|+.+|..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34566677777777765 4 49999999999999998753
No 209
>PLN00413 triacylglycerol lipase
Probab=94.96 E-value=0.038 Score=54.00 Aligned_cols=36 Identities=25% Similarity=0.428 Sum_probs=28.1
Q ss_pred hchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHh
Q 035617 170 AYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 170 ~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~ 205 (422)
.+++...+..+.++.+ .++.+.|||+||++|..++.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3455566666666666 89999999999999998775
No 210
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.92 E-value=1.3 Score=43.51 Aligned_cols=101 Identities=18% Similarity=0.111 Sum_probs=60.6
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeE-EEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDV-WIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v-~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
+.|..|++-|+.. .+.|- . -..+...|-.. +.-|.|=-|.+--. .-+++. .-+..+|
T Consensus 288 KPPL~VYFSGyR~-aEGFE----g---y~MMk~Lg~PfLL~~DpRleGGaFYl-------------Gs~eyE-~~I~~~I 345 (511)
T TIGR03712 288 KPPLNVYFSGYRP-AEGFE----G---YFMMKRLGAPFLLIGDPRLEGGAFYL-------------GSDEYE-QGIINVI 345 (511)
T ss_pred CCCeEEeeccCcc-cCcch----h---HHHHHhcCCCeEEeeccccccceeee-------------CcHHHH-HHHHHHH
Confidence 4578899999876 33321 1 01233445544 44588877765320 112222 4455666
Q ss_pred HHHHHHhC---CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhc
Q 035617 178 DHVYEQTG---QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYL 225 (422)
Q Consensus 178 ~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~ 225 (422)
...++.++ ..++|-|-|||..-|++|+++-. -.++|+-=|.+.+
T Consensus 346 ~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~----P~AIiVgKPL~NL 392 (511)
T TIGR03712 346 QEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS----PHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHhCCCHHHeeeccccccchhhhhhcccCC----CceEEEcCcccch
Confidence 66666668 67999999999999999998632 2345544455433
No 211
>PLN02162 triacylglycerol lipase
Probab=94.70 E-value=0.05 Score=53.06 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=25.5
Q ss_pred chHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHh
Q 035617 171 YDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~ 205 (422)
+.+...+.-+.++.+ .++++.|||+||++|..+++
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344444544445555 79999999999999988765
No 212
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.52 E-value=1.2 Score=42.33 Aligned_cols=64 Identities=11% Similarity=0.118 Sum_probs=49.1
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccc-cCchhHHHHHHHHHhhhcCc
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ-VSPQLKMIAVMALFQRQASM 420 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~-~~~~~v~~~i~~fl~~~~~~ 420 (422)
.+.+.+++..|.++|.+ +++.+.. .. .+-.++-+-+.++ |..+. ..|..+.+...+|+++..+.
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~--~~-~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALR--RE-KGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHH--Hh-cCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 57788899999999999 5554444 22 1224666677889 99988 88999999999999987543
No 213
>PLN02310 triacylglycerol lipase
Probab=94.50 E-value=0.047 Score=52.59 Aligned_cols=20 Identities=35% Similarity=0.464 Sum_probs=18.1
Q ss_pred CeEEEEEeChhHHHHHHHHh
Q 035617 186 QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 186 ~~i~l~G~S~Gg~~a~~~~~ 205 (422)
.+|.+.|||+||++|..+|.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred ceEEEEcccHHHHHHHHHHH
Confidence 58999999999999998775
No 214
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=94.29 E-value=0.58 Score=40.00 Aligned_cols=118 Identities=16% Similarity=0.126 Sum_probs=70.0
Q ss_pred CCCCcEEEecCCCCCCcccccCCCC--CCHHHHHH------hCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPE--QNLPLILA------DHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELV 169 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~--~~l~~~l~------~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 169 (422)
..+.+.++++|...+.......... ..+...+. ..+=+|-++-|.||---.... .... .-...+-+
T Consensus 17 ~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~-~~a~-----~~~~A~~g 90 (177)
T PF06259_consen 17 TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGL-PDAA-----SPGYARAG 90 (177)
T ss_pred CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCcc-cccc-----CchHHHHH
Confidence 4467899999998877654221000 01111111 123356666666653220000 0000 11233445
Q ss_pred hchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 170 AYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 170 ~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
..++...++-|....+ .++.++|||+|+.++-.++.... ..+..++++.++.
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~--~~vddvv~~GSPG 144 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGG--LRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCC--CCcccEEEECCCC
Confidence 5778888888877763 78999999999999999887633 4788888887654
No 215
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.19 E-value=0.21 Score=45.82 Aligned_cols=125 Identities=18% Similarity=0.165 Sum_probs=70.6
Q ss_pred CcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCC----CeEEEeCCCCCCCCCCCCCCC
Q 035617 79 GYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHG----FDVWIANTRGTRFSRRHTSLD 154 (422)
Q Consensus 79 G~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g----~~v~~~d~rG~G~S~~~~~~~ 154 (422)
+..-.+++.|++.. ...+.|+++++||- .|....+-....+.|...| -.++.+|+----. ++.. -
T Consensus 80 ~~~~~vv~lppgy~---~~~k~pvl~~~DG~-----~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~-R~~~--~ 148 (299)
T COG2382 80 SERRRVVYLPPGYN---PLEKYPVLYLQDGQ-----DWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKK-RREE--L 148 (299)
T ss_pred cceeEEEEeCCCCC---ccccccEEEEeccH-----HHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHH-HHHH--h
Confidence 33444556666532 44567999999974 3333322223334444444 3455555543100 0000 0
Q ss_pred CCcccccccChHHHHhchHHHHHHHHHHHhC-----CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhh
Q 035617 155 PSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-----QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 155 ~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-----~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~ 224 (422)
.....| +.+++ ..++=+|.+..+ ..-+|+|.|+||.+++.++..+| +++-.++..||...
T Consensus 149 ~~n~~~----~~~L~----~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~P--e~FG~V~s~Sps~~ 213 (299)
T COG2382 149 HCNEAY----WRFLA----QELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHP--ERFGHVLSQSGSFW 213 (299)
T ss_pred cccHHH----HHHHH----HHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCc--hhhceeeccCCccc
Confidence 011111 12222 355566766655 45689999999999999999777 88988988888653
No 216
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.19 E-value=0.057 Score=53.37 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=25.4
Q ss_pred HHHhchHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHh
Q 035617 167 ELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 167 ~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~ 205 (422)
+.+..++..+++...+... .+|.+.|||+||++|+.+|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 3333444454444422212 57999999999999998775
No 217
>PLN02934 triacylglycerol lipase
Probab=94.18 E-value=0.068 Score=52.71 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=28.0
Q ss_pred chHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHh
Q 035617 171 YDLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~ 205 (422)
+.+...++.++++.+ .++++.|||+||++|..++.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 445566666667766 89999999999999998865
No 218
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.12 E-value=0.044 Score=46.90 Aligned_cols=66 Identities=8% Similarity=-0.047 Sum_probs=50.4
Q ss_pred cCCCCCCCccEEEEEeCCCccCChh-----HHHHHHhcccCCCCCceeeEEcCCC-ccccc---cCchhHHHHHHHHHhh
Q 035617 346 NISNIPHDLPLFVSYGGNDALADLT-----QYLLYLCKLFSKSGESLNLICVMSK-SLSFQ---VSPQLKMIAVMALFQR 416 (422)
Q Consensus 346 ~l~~i~~~~Pvlii~G~~D~~v~~~-----~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~---~~~~~v~~~i~~fl~~ 416 (422)
++..|+ ++++|-|=|+.|.++.+- ..|...+ |. ..+.-++.|++ |...+ .-.++|++.|.+|+.+
T Consensus 128 dp~aI~-~taLlTVEGe~DDIsg~GQT~AA~~LC~gl--p~---~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 128 DPAAIR-RTALLTVEGERDDISGPGQTHAAHDLCTGL--PA---DMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred chHHcc-cceeEEeecCcccCCcchHHHHHHHHhcCC--CH---HHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 556676 588999999999999887 4444444 43 34566778999 99998 4467999999999986
Q ss_pred h
Q 035617 417 Q 417 (422)
Q Consensus 417 ~ 417 (422)
+
T Consensus 202 ~ 202 (202)
T PF06850_consen 202 H 202 (202)
T ss_pred C
Confidence 4
No 219
>PLN02571 triacylglycerol lipase
Probab=93.93 E-value=0.078 Score=51.27 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=25.2
Q ss_pred chHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhc
Q 035617 171 YDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
+++.+.+..+.+... .+|++.||||||++|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 334444444555544 379999999999999987763
No 220
>PLN02408 phospholipase A1
Probab=93.77 E-value=0.092 Score=50.04 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=25.8
Q ss_pred chHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhc
Q 035617 171 YDLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
+++.+.+..+.++.+ .+|++.|||+||++|..+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 334444555555555 369999999999999988764
No 221
>PLN02324 triacylglycerol lipase
Probab=93.30 E-value=0.12 Score=49.92 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHh
Q 035617 172 DLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 172 D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~ 205 (422)
.+.+.+..+.+... .+|.+.|||+||++|+.+|.
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 34444445555544 37999999999999998876
No 222
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=92.93 E-value=0.12 Score=40.46 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=22.9
Q ss_pred EEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCccc
Q 035617 72 IDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTW 116 (422)
Q Consensus 72 ~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~ 116 (422)
++.+.-||..++..+..+.. ++..|+||+||++++-..|
T Consensus 70 hf~t~I~g~~iHFih~rs~~------~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 70 HFKTEIDGLDIHFIHVRSKR------PNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp EEEEEETTEEEEEEEE--S-------TT-EEEEEE--SS--GGGG
T ss_pred CeeEEEeeEEEEEEEeeCCC------CCCeEEEEECCCCccHHhH
Confidence 34444579888877776654 4678999999999987765
No 223
>PLN02802 triacylglycerol lipase
Probab=92.71 E-value=0.15 Score=50.28 Aligned_cols=35 Identities=29% Similarity=0.362 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHhC---CeEEEEEeChhHHHHHHHHhc
Q 035617 172 DLPAVFDHVYEQTG---QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 172 D~~~~i~~i~~~~~---~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
++.+-+..+.+... .+|++.|||+||++|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34444444555544 379999999999999987763
No 224
>PLN02761 lipase class 3 family protein
Probab=92.21 E-value=0.2 Score=49.67 Aligned_cols=34 Identities=35% Similarity=0.407 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHh-----C--CeEEEEEeChhHHHHHHHHh
Q 035617 172 DLPAVFDHVYEQT-----G--QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 172 D~~~~i~~i~~~~-----~--~~i~l~G~S~Gg~~a~~~~~ 205 (422)
++.+.|..+.+.. + .+|++.|||+||++|..+|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3344444455544 2 57999999999999998775
No 225
>PLN02753 triacylglycerol lipase
Probab=91.97 E-value=0.17 Score=50.11 Aligned_cols=20 Identities=40% Similarity=0.484 Sum_probs=18.2
Q ss_pred CeEEEEEeChhHHHHHHHHh
Q 035617 186 QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 186 ~~i~l~G~S~Gg~~a~~~~~ 205 (422)
.+|.+.|||+||++|..+|.
T Consensus 312 ~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAY 331 (531)
T ss_pred ceEEEEccCHHHHHHHHHHH
Confidence 58999999999999998875
No 226
>PLN02719 triacylglycerol lipase
Probab=91.94 E-value=0.23 Score=49.14 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHhC------CeEEEEEeChhHHHHHHHHh
Q 035617 172 DLPAVFDHVYEQTG------QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 172 D~~~~i~~i~~~~~------~~i~l~G~S~Gg~~a~~~~~ 205 (422)
++.+.+.-+.+..+ .+|.+.|||+||++|..+|.
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 34444444544432 48999999999999998775
No 227
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=91.74 E-value=1.5 Score=41.39 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=40.3
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCCCceeeEEcCCC-ccccccCchhHHHHHHHHHh
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSGESLNLICVMSK-SLSFQVSPQLKMIAVMALFQ 415 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~~~~~~~~i~~~-H~~~~~~~~~v~~~i~~fl~ 415 (422)
+|-.|+.|..|.+.++. ...++.+ |. .+-+..+|+. |.+....-++....++++++
T Consensus 330 lpKyivnaSgDdff~pDsa~lYyd~L--PG----~kaLrmvPN~~H~~~n~~i~esl~~flnrfq 388 (507)
T COG4287 330 LPKYIVNASGDDFFVPDSANLYYDDL--PG----EKALRMVPNDPHNLINQFIKESLEPFLNRFQ 388 (507)
T ss_pred ccceeecccCCcccCCCccceeeccC--CC----ceeeeeCCCCcchhhHHHHHHHHHHHHHHHh
Confidence 78899999988887777 7888999 87 5778899999 98864333333333333333
No 228
>PLN02847 triacylglycerol lipase
Probab=91.65 E-value=0.29 Score=49.28 Aligned_cols=35 Identities=26% Similarity=0.118 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhc
Q 035617 172 DLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 172 D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
++...+.-+.+..+ -+++++|||+||++|..++..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 33334444445555 799999999999999887654
No 229
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=90.61 E-value=0.21 Score=47.68 Aligned_cols=20 Identities=50% Similarity=0.818 Sum_probs=17.1
Q ss_pred CeEEEEEeChhHHHHHHHHh
Q 035617 186 QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 186 ~~i~l~G~S~Gg~~a~~~~~ 205 (422)
.+|..+|||+||.++..+..
T Consensus 150 ~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred ceeeeeeeecCCeeeeEEEE
Confidence 89999999999999876544
No 230
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=90.05 E-value=0.41 Score=45.67 Aligned_cols=35 Identities=29% Similarity=0.294 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhc
Q 035617 172 DLPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 172 D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
.+.+.++.+.+..+ -+|.+.|||+||++|..+|..
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 34455556666667 899999999999999988774
No 231
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.14 E-value=1.4 Score=39.29 Aligned_cols=32 Identities=16% Similarity=0.208 Sum_probs=23.7
Q ss_pred HHHHHHHHHh--CCeEEEEEeChhHHHHHHHHhc
Q 035617 175 AVFDHVYEQT--GQKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 175 ~~i~~i~~~~--~~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
.+.+.+.+.. +++++++|+|+|+.++...+.+
T Consensus 35 ~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 35 NLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred HHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 4444454433 2899999999999999887665
No 232
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=87.77 E-value=0.77 Score=41.66 Aligned_cols=46 Identities=28% Similarity=0.148 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 173 LPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 173 ~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
...+...+++... .+|.+.|||+||++|..+..... +-.+...+|.
T Consensus 262 ~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg----lP~VaFesPG 308 (425)
T COG5153 262 ALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG----LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC----CceEEecCch
Confidence 3455556767777 89999999999999987765432 3344444553
No 233
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=87.77 E-value=0.77 Score=41.66 Aligned_cols=46 Identities=28% Similarity=0.148 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 173 LPAVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 173 ~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
...+...+++... .+|.+.|||+||++|..+..... +-.+...+|.
T Consensus 262 ~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg----lP~VaFesPG 308 (425)
T KOG4540|consen 262 ALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG----LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC----CceEEecCch
Confidence 3455556767777 89999999999999987765432 3344444553
No 234
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=86.78 E-value=1.1 Score=42.51 Aligned_cols=47 Identities=21% Similarity=0.352 Sum_probs=32.4
Q ss_pred HHHHHH-hC-CeEEEEEeChhHHHHHHHHhc---cchhhhHhheeeecchhh
Q 035617 178 DHVYEQ-TG-QKIHYVGHSLGTLIALASFSE---GLQVDKLKSAALLSPIAY 224 (422)
Q Consensus 178 ~~i~~~-~~-~~i~l~G~S~Gg~~a~~~~~~---~~~~~~v~~~v~~~p~~~ 224 (422)
+.+.++ .+ .+|.|+|||+|+.+...++.. .+....|+.+++++.+..
T Consensus 210 ~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 210 DALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred HHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 344433 24 789999999999999887664 221235788888886543
No 235
>PF03283 PAE: Pectinacetylesterase
Probab=85.26 E-value=2.3 Score=40.98 Aligned_cols=37 Identities=24% Similarity=0.202 Sum_probs=29.9
Q ss_pred HhchHHHHHHHHHHH-hC--CeEEEEEeChhHHHHHHHHh
Q 035617 169 VAYDLPAVFDHVYEQ-TG--QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 169 ~~~D~~~~i~~i~~~-~~--~~i~l~G~S~Gg~~a~~~~~ 205 (422)
+..-+.++++++.+. .+ ++|+|.|.|-||.-++..+.
T Consensus 136 G~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 136 GYRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred cHHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 334567999999888 54 89999999999999887554
No 236
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=84.49 E-value=1.8 Score=43.34 Aligned_cols=62 Identities=8% Similarity=0.170 Sum_probs=48.4
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCC----------------CC---------C-----ceeeEEcCCC-ccccc
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSK----------------SG---------E-----SLNLICVMSK-SLSFQ 400 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~----------------~~---------~-----~~~~~~i~~~-H~~~~ 400 (422)
++||+.+|+.|.+++.. +++.+.+ +-. .+ . ...++.++++ |+...
T Consensus 365 ikVLiYnGd~D~icn~~Gt~~wi~~L--~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~ 442 (462)
T PTZ00472 365 VRVMIYAGDMDFICNWIGNKAWTLAL--QWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM 442 (462)
T ss_pred ceEEEEECCcCeecCcHhHHHHHHhC--CCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh
Confidence 79999999999999998 6666666 310 00 0 2455667899 99999
Q ss_pred cCchhHHHHHHHHHhhh
Q 035617 401 VSPQLKMIAVMALFQRQ 417 (422)
Q Consensus 401 ~~~~~v~~~i~~fl~~~ 417 (422)
++|+.+++.|.+|+...
T Consensus 443 d~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 443 DQPAVALTMINRFLRNR 459 (462)
T ss_pred hHHHHHHHHHHHHHcCC
Confidence 99999999999999653
No 237
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=80.38 E-value=3.8 Score=35.66 Aligned_cols=42 Identities=26% Similarity=0.329 Sum_probs=32.8
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCC-eEEEeCCCCC
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGF-DVWIANTRGT 144 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~-~v~~~d~rG~ 144 (422)
+...+|++.||...++... +..+-..|.++|| +|++...-|+
T Consensus 136 k~e~~vlmgHGt~h~s~~~-----YacLd~~~~~~~f~~v~v~~ve~y 178 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAA-----YACLDHVLDEYGFDNVFVAAVEGY 178 (265)
T ss_pred cCeEEEEEecCCCccHHHH-----HHHHHHHHHhcCCCceEEEEecCC
Confidence 4567999999998877765 4666677888999 8888877765
No 238
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=79.60 E-value=6.3 Score=39.56 Aligned_cols=67 Identities=12% Similarity=-0.061 Sum_probs=47.4
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcc--cCC--CC-CceeeEEcCCC-ccccc--cCchhHHHHHHHHHhhhcCc
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKL--FSK--SG-ESLNLICVMSK-SLSFQ--VSPQLKMIAVMALFQRQASM 420 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~--~~~--~~-~~~~~~~i~~~-H~~~~--~~~~~v~~~i~~fl~~~~~~ 420 (422)
-.++++||..|.++++. ..+++++.. ... .. +-.+++++|+. |+.-- ..+-.....+++|+++-..+
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 45899999999999999 444444300 221 11 23689999999 99876 35557889999999875443
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=78.19 E-value=5.3 Score=40.10 Aligned_cols=39 Identities=13% Similarity=0.079 Sum_probs=34.7
Q ss_pred CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 186 QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 186 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
+.-+..|.|.||..++..|.+.| +..+++++-+|+....
T Consensus 115 ~~sY~~GcS~GGRqgl~~AQryP--~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 115 KYSYFSGCSTGGRQGLMAAQRYP--EDFDGILAGAPAINWT 153 (474)
T ss_pred CceEEEEeCCCcchHHHHHHhCh--hhcCeEEeCCchHHHH
Confidence 67899999999999999999766 8999999999987543
No 240
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=77.12 E-value=6.5 Score=43.08 Aligned_cols=97 Identities=16% Similarity=0.135 Sum_probs=59.3
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
.+.|++.|+|-..+..... .+ |+.+ ...+.||.-.-.. .|. =+++..++ --+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l------~~----la~r------le~PaYglQ~T~~--vP~------dSies~A~----~yi 2172 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTAL------ES----LASR------LEIPAYGLQCTEA--VPL------DSIESLAA----YYI 2172 (2376)
T ss_pred ccCCceEEEeccccchHHH------HH----HHhh------cCCcchhhhcccc--CCc------chHHHHHH----HHH
Confidence 4579999999887765553 22 3321 2345555332111 121 14555554 455
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
+.+++..+ .+-.++|+|+|+.++...|.+-+..+....+|++...
T Consensus 2173 rqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2173 RQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred HHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 55766666 8999999999999999988864333445557766543
No 241
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.25 E-value=3.8 Score=34.48 Aligned_cols=47 Identities=19% Similarity=0.036 Sum_probs=39.2
Q ss_pred HHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 175 AVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 175 ~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
+.-.|++++.- ....+-|.||||..|..+.-++| +...++|++|..-
T Consensus 89 AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP--~lftkvialSGvY 136 (227)
T COG4947 89 AYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHP--HLFTKVIALSGVY 136 (227)
T ss_pred HHHHHHHHhhcCCCccccccchhhhhhhhhheeCh--hHhhhheeeccee
Confidence 56667877755 77888999999999999988887 8889999998754
No 242
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=72.62 E-value=43 Score=31.42 Aligned_cols=100 Identities=21% Similarity=0.132 Sum_probs=61.4
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCC---------HHHHHHhCCCeEEEeCC-CCCCCCCCCCCCCCCcccccccChHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQN---------LPLILADHGFDVWIANT-RGTRFSRRHTSLDPSQMEFWNWSWDE 167 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~---------l~~~l~~~g~~v~~~d~-rG~G~S~~~~~~~~~~~~~~~~~~~~ 167 (422)
..+|..+.+.|..+.+..=+-++.... -.-+|.+ -++..+|. -|.|.|--.-+ ....=+..+
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~------~~Y~~~~~q 100 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGS------SAYTTNNKQ 100 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCc------ccccccHHH
Confidence 457899999999887765333322110 0122322 46666665 57887743111 111113444
Q ss_pred HHhchHHHHHHHHHHHhC----CeEEEEEeChhHHHHHHHHhc
Q 035617 168 LVAYDLPAVFDHVYEQTG----QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 168 ~~~~D~~~~i~~i~~~~~----~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
+..|+.+++........ .+++|+..|.||-+|...+..
T Consensus 101 -ia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 101 -IALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred -HHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 44888888877766554 689999999999998877654
No 243
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=71.75 E-value=5.9 Score=38.80 Aligned_cols=60 Identities=10% Similarity=0.149 Sum_probs=43.9
Q ss_pred ccEEEEEeCCCccCChh--HHHHHHhcccCCCC---------------------CceeeEEcCCC-ccccccCchhHHHH
Q 035617 354 LPLFVSYGGNDALADLT--QYLLYLCKLFSKSG---------------------ESLNLICVMSK-SLSFQVSPQLKMIA 409 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~~---------------------~~~~~~~i~~~-H~~~~~~~~~v~~~ 409 (422)
++||+.+|..|.++|.- +.+.+.+ .-.+. ....++.+.++ |+...++|+..++.
T Consensus 331 irVLiy~Gd~D~i~n~~Gt~~~i~~L--~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m 408 (415)
T PF00450_consen 331 IRVLIYNGDLDLICNFLGTERWIDNL--NWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQM 408 (415)
T ss_dssp -EEEEEEETT-SSS-HHHHHHHHHCT--ECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHH
T ss_pred ceeEEeccCCCEEEEeccchhhhhcc--ccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHH
Confidence 79999999999999988 7777666 32000 11246778899 99999999999999
Q ss_pred HHHHHh
Q 035617 410 VMALFQ 415 (422)
Q Consensus 410 i~~fl~ 415 (422)
+.+||+
T Consensus 409 ~~~fl~ 414 (415)
T PF00450_consen 409 FRRFLK 414 (415)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 999985
No 244
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=68.11 E-value=0.72 Score=42.48 Aligned_cols=38 Identities=24% Similarity=0.370 Sum_probs=29.4
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCC
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANT 141 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~ 141 (422)
.+.|.|++.||+.+....- ...+..++..++.+...+.
T Consensus 47 ~~~p~v~~~h~~~~~~~~~------~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQS------LGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred ccCceEEeccCccccccCc------chHHHHhhhceeEEeeecc
Confidence 4678899999998888873 4477778888888777764
No 245
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.11 E-value=10 Score=37.71 Aligned_cols=52 Identities=17% Similarity=0.316 Sum_probs=35.5
Q ss_pred HHHHHHHHHh-C-CeEEEEEeChhHHHHHHHHhc---cchhhhHhheeeecchhhcc
Q 035617 175 AVFDHVYEQT-G-QKIHYVGHSLGTLIALASFSE---GLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 175 ~~i~~i~~~~-~-~~i~l~G~S~Gg~~a~~~~~~---~~~~~~v~~~v~~~p~~~~~ 226 (422)
.+.+.+..+. | .||.|+|+|+|+-+.+.++.. .+...-|..++++..+...+
T Consensus 434 lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 434 LLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred HHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 3344444443 4 899999999999999976553 22234778888888665443
No 246
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=64.05 E-value=7 Score=33.29 Aligned_cols=47 Identities=17% Similarity=0.263 Sum_probs=35.3
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeC--CCCCCCCC
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIAN--TRGTRFSR 148 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d--~rG~G~S~ 148 (422)
..+|.||++-|++++..+=. ...+.+.|.+.|++|+++| .--||.+.
T Consensus 20 ~~~~~viW~TGLSGsGKSTi----A~ale~~L~~~G~~~y~LDGDnvR~gL~~ 68 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTI----ANALEEKLFAKGYHVYLLDGDNVRHGLNR 68 (197)
T ss_pred CCCCeEEEeecCCCCCHHHH----HHHHHHHHHHcCCeEEEecChhHhhcccC
Confidence 45789999999999887633 2466777888999999997 33356554
No 247
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=62.79 E-value=9.3 Score=38.65 Aligned_cols=29 Identities=28% Similarity=0.598 Sum_probs=19.7
Q ss_pred HHHHHHHHH-hC--CeEEEEEeChhHHHHHHH
Q 035617 175 AVFDHVYEQ-TG--QKIHYVGHSLGTLIALAS 203 (422)
Q Consensus 175 ~~i~~i~~~-~~--~~i~l~G~S~Gg~~a~~~ 203 (422)
.+++.+... .| .+|..+||||||..+=..
T Consensus 512 ~lleql~~~~VG~~RPivwI~HSmGGLl~K~l 543 (697)
T KOG2029|consen 512 ELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKL 543 (697)
T ss_pred HHHHHHHHhccCCCCceEEEecccchHHHHHH
Confidence 455555333 23 789999999999876443
No 248
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=61.17 E-value=9.3 Score=38.78 Aligned_cols=38 Identities=18% Similarity=0.108 Sum_probs=30.2
Q ss_pred EEEEEeChhHHHHHHHHhccchhhhHhheeeecchhhcc
Q 035617 188 IHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 188 i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
++..+.|=||..++.++.+.. ...|++++...|...+.
T Consensus 287 VIAssvSNGGgAal~AAEqD~-~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDT-QGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhccc-CCceeeEEecCCccCCC
Confidence 556789999999999988753 24899999988876554
No 249
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=60.73 E-value=6.3 Score=31.55 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=22.8
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCC
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHG 133 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g 133 (422)
.+||.|+-+||++|....|.. +-+|+.|-..|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~----~liA~~ly~~G 81 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVS----RLIAEHLYKSG 81 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHH----HHHHHHHHhcc
Confidence 568999999999999988742 34455544445
No 250
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.63 E-value=25 Score=29.40 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=49.5
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeE-EEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDV-WIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v-~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
...||++-|++...+.... + .....+++ +.+|++..-. + -|..+ .
T Consensus 11 d~LIvyFaGwgtpps~v~H------L---ilpeN~dl~lcYDY~dl~l---------------d--------fDfsA-y- 56 (214)
T COG2830 11 DHLIVYFAGWGTPPSAVNH------L---ILPENHDLLLCYDYQDLNL---------------D--------FDFSA-Y- 56 (214)
T ss_pred CEEEEEEecCCCCHHHHhh------c---cCCCCCcEEEEeehhhcCc---------------c--------cchhh-h-
Confidence 3589999999887776421 1 23345765 4568875321 1 11111 1
Q ss_pred HHHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHhheeeecch
Q 035617 179 HVYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLKSAALLSPI 222 (422)
Q Consensus 179 ~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~ 222 (422)
..|.+|.+|||-.+|-..+... +.++.++++.-
T Consensus 57 -------~hirlvAwSMGVwvAeR~lqg~----~lksatAiNGT 89 (214)
T COG2830 57 -------RHIRLVAWSMGVWVAERVLQGI----RLKSATAINGT 89 (214)
T ss_pred -------hhhhhhhhhHHHHHHHHHHhhc----cccceeeecCC
Confidence 4567999999999998877644 47777777753
No 251
>PLN02209 serine carboxypeptidase
Probab=56.88 E-value=25 Score=34.92 Aligned_cols=61 Identities=11% Similarity=0.057 Sum_probs=46.7
Q ss_pred CccEEEEEeCCCccCChh--HHHHHHhcccCCC----------C---------C-ceeeEEcCCC-ccccccCchhHHHH
Q 035617 353 DLPLFVSYGGNDALADLT--QYLLYLCKLFSKS----------G---------E-SLNLICVMSK-SLSFQVSPQLKMIA 409 (422)
Q Consensus 353 ~~Pvlii~G~~D~~v~~~--~~l~~~l~~~~~~----------~---------~-~~~~~~i~~~-H~~~~~~~~~v~~~ 409 (422)
.++||+..|+.|.+|+.- +++.+.+ .-.+ + . ...++.+.++ |+.. .+|++.++.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L--~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m 427 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSL--NYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIM 427 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhc--CCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHH
Confidence 379999999999999998 7777777 4100 0 1 1345567789 9995 699999999
Q ss_pred HHHHHhh
Q 035617 410 VMALFQR 416 (422)
Q Consensus 410 i~~fl~~ 416 (422)
+-+|+..
T Consensus 428 ~~~fi~~ 434 (437)
T PLN02209 428 FQRWISG 434 (437)
T ss_pred HHHHHcC
Confidence 9999964
No 252
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=54.92 E-value=45 Score=30.82 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=28.5
Q ss_pred chHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHh
Q 035617 171 YDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFS 205 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~ 205 (422)
..+..+..++.+... .+|+++|+|=|+.+|-.++.
T Consensus 75 ~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 75 ARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred HHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHH
Confidence 456677778777666 88999999999999988775
No 253
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=54.29 E-value=30 Score=35.16 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=58.5
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
++-.|+-+||.+--..+-. .....+-.|-...|..|+.+||-=. +...-| --. +.+--+.-
T Consensus 395 S~sli~HcHGGGfVAqsSk--SHE~YLr~Wa~aL~cPiiSVdYSLA-----PEaPFP-------Ral-----eEv~fAYc 455 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSK--SHEPYLRSWAQALGCPIISVDYSLA-----PEAPFP-------RAL-----EEVFFAYC 455 (880)
T ss_pred CceEEEEecCCceeeeccc--cccHHHHHHHHHhCCCeEEeeeccC-----CCCCCC-------cHH-----HHHHHHHH
Confidence 4567888999764221100 0022333344445899999997531 111111 012 23334555
Q ss_pred HHHHHh---C---CeEEEEEeChhHHHHHHHHhcc-chh-hhHhheeeecchhhccchh
Q 035617 179 HVYEQT---G---QKIHYVGHSLGTLIALASFSEG-LQV-DKLKSAALLSPIAYLSYMR 229 (422)
Q Consensus 179 ~i~~~~---~---~~i~l~G~S~Gg~~a~~~~~~~-~~~-~~v~~~v~~~p~~~~~~~~ 229 (422)
|+.+.. | ++|+++|-|-||.+.+..+.+. .+. ..-+++++.-|+.......
T Consensus 456 W~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~q~~p 514 (880)
T KOG4388|consen 456 WAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLLQPAP 514 (880)
T ss_pred HHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhcccCC
Confidence 665542 3 8999999999998755443321 000 1235666666554444333
No 254
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=48.33 E-value=2e+02 Score=27.21 Aligned_cols=102 Identities=15% Similarity=0.076 Sum_probs=58.3
Q ss_pred CCCCcEEEecCCCCCCcccccCCCC--CCHHHHHHh-CCCeEEEeCCCCCCCCCCCC------CCCCC-cccccccChHH
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPE--QNLPLILAD-HGFDVWIANTRGTRFSRRHT------SLDPS-QMEFWNWSWDE 167 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~--~~l~~~l~~-~g~~v~~~d~rG~G~S~~~~------~~~~~-~~~~~~~~~~~ 167 (422)
..+..|+++-|-..+-. .+.+- ..|...|.. .|-.++++=..|-|--.-.. ..+.. ......|++
T Consensus 29 s~k~lV~CfDGT~nrfg---~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL-- 103 (423)
T COG3673 29 SMKRLVFCFDGTWNRFG---AQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGL-- 103 (423)
T ss_pred CcceEEEEecCchhhcC---CCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHH--
Confidence 45778888888644332 22211 123333433 46778888777877331000 00000 000112222
Q ss_pred HHhchHHHHHHHHHHHhC--CeEEEEEeChhHHHHHHHHhc
Q 035617 168 LVAYDLPAVFDHVYEQTG--QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 168 ~~~~D~~~~i~~i~~~~~--~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
..-|..+..++.+... +.|++.|+|-|+..+-.+|..
T Consensus 104 --~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 104 --VQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred --HHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 2445577888887776 899999999999999888764
No 255
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=45.53 E-value=22 Score=32.73 Aligned_cols=38 Identities=26% Similarity=0.302 Sum_probs=29.0
Q ss_pred CeEEEEEeChhHHHHHHHHhc-cchhhhHhheeeecchh
Q 035617 186 QKIHYVGHSLGTLIALASFSE-GLQVDKLKSAALLSPIA 223 (422)
Q Consensus 186 ~~i~l~G~S~Gg~~a~~~~~~-~~~~~~v~~~v~~~p~~ 223 (422)
-+++|.|.|+|+.-+..+... ....+++++++..+|..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 579999999999988765543 22335899999998864
No 256
>COG3580 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.49 E-value=94 Score=29.00 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=45.8
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCC-CCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGT-RFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~-G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
...||.=|-+--+.+. +..+.+.+.+.|+.|++.|---+ |.-.+... -.. .|+++.+.. .+..
T Consensus 203 ~gVvLaGrPYh~Dpei------NhgI~e~i~~~g~~IlTedsI~~~~~~~~~l~----i~~--~W~~hsr~y----~AA~ 266 (351)
T COG3580 203 KGVVLAGRPYHFDPEI------NHGIPEKINSRGIPILTEDSIPLLGEIEGPLR----IVN--QWKYHSRLY----AAAK 266 (351)
T ss_pred eeEEEeCCccccCccc------ccchHHHHhhcCCeeeecccchhhhcccccee----ehh--hhHHHHHHH----HHHH
Confidence 4455544555333333 57899999999999999997763 43333221 122 344555553 5666
Q ss_pred HHHHHhC-CeEEEEEeC
Q 035617 179 HVYEQTG-QKIHYVGHS 194 (422)
Q Consensus 179 ~i~~~~~-~~i~l~G~S 194 (422)
|+.+..+ .-|.++-++
T Consensus 267 fvak~~nlegV~l~SFg 283 (351)
T COG3580 267 FVAKHPNLEGVQLVSFG 283 (351)
T ss_pred HHhcCCCeeeEEEeecc
Confidence 6655444 555555433
No 257
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=37.33 E-value=69 Score=29.57 Aligned_cols=90 Identities=17% Similarity=0.124 Sum_probs=50.3
Q ss_pred ecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEe------CCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 106 QHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIA------NTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 106 ~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~------d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
+||..+++.. ...+...|++||++ ++.|||...+.... .+++..+++-
T Consensus 11 v~G~vGn~AA----------~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~----------------~e~l~~~l~~ 64 (281)
T COG2240 11 VYGSVGNSAA----------IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMP----------------PEQLADLLNG 64 (281)
T ss_pred eecccccHhH----------HHHHHHcCCceeeeceEEecCCCCCCCCCCcCCC----------------HHHHHHHHHH
Confidence 5777766654 22377889998876 78999987664321 1445566666
Q ss_pred HHH--HhC-CeEEEEEe----ChhHHHHHHHHhccchhhhHhheeeecchh
Q 035617 180 VYE--QTG-QKIHYVGH----SLGTLIALASFSEGLQVDKLKSAALLSPIA 223 (422)
Q Consensus 180 i~~--~~~-~~i~l~G~----S~Gg~~a~~~~~~~~~~~~v~~~v~~~p~~ 223 (422)
+.+ ..+ -..++.|+ .++-.++-....... ..-+.++++.|+.
T Consensus 65 l~~~~~~~~~davltGYlgs~~qv~~i~~~v~~vk~--~~P~~~~l~DPVM 113 (281)
T COG2240 65 LEAIDKLGECDAVLTGYLGSAEQVRAIAGIVKAVKE--ANPNALYLCDPVM 113 (281)
T ss_pred HHhcccccccCEEEEccCCCHHHHHHHHHHHHHHhc--cCCCeEEEeCCcc
Confidence 655 222 34566665 333333322222111 1234668888864
No 258
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=35.16 E-value=88 Score=29.28 Aligned_cols=87 Identities=20% Similarity=0.218 Sum_probs=50.7
Q ss_pred HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHH--HHHHHHHHHhC-Ce-E-----EEEEeCh
Q 035617 125 LPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLP--AVFDHVYEQTG-QK-I-----HYVGHSL 195 (422)
Q Consensus 125 l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~i~~i~~~~~-~~-i-----~l~G~S~ 195 (422)
.+..|.++||+|+++|....|....-.... ..| ...|+. +.++.+.++.. +- | ..||.|+
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~---~~f--------~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv 84 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKLQ---FKF--------YEGDLLDRALLTAVFEENKIDAVVHFAASISVGESV 84 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhcc---Cce--------EEeccccHHHHHHHHHhcCCCEEEECccccccchhh
Confidence 455688899999999999887554322110 011 123332 35555666655 33 2 3577775
Q ss_pred -----------hHHHHH-HHHhccchhhhHhheeeecchhhcc
Q 035617 196 -----------GTLIAL-ASFSEGLQVDKLKSAALLSPIAYLS 226 (422)
Q Consensus 196 -----------Gg~~a~-~~~~~~~~~~~v~~~v~~~p~~~~~ 226 (422)
+|.+.+ .++.+. .|+.+|..|+++...
T Consensus 85 ~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vFSStAavYG 123 (329)
T COG1087 85 QNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIFSSTAAVYG 123 (329)
T ss_pred hCHHHHHhhchHhHHHHHHHHHHh----CCCEEEEecchhhcC
Confidence 455544 444433 488999888776544
No 259
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=35.00 E-value=26 Score=29.33 Aligned_cols=38 Identities=24% Similarity=0.275 Sum_probs=28.3
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCC
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANT 141 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~ 141 (422)
+|.||++-|++++..+=+ -..+.+.|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTl----A~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTL----ARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHH----HHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHH----HHHHHHHHHHcCCcEEEecC
Confidence 478999999999887633 25667777788999999973
No 260
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=34.90 E-value=78 Score=22.87 Aligned_cols=35 Identities=26% Similarity=0.257 Sum_probs=25.5
Q ss_pred hchHHHHHHHHHHHh---C-CeEEEEEeChhHHHHHHHH
Q 035617 170 AYDLPAVFDHVYEQT---G-QKIHYVGHSLGTLIALASF 204 (422)
Q Consensus 170 ~~D~~~~i~~i~~~~---~-~~i~l~G~S~Gg~~a~~~~ 204 (422)
...+...++|+.++. + +++.++|-|-|=.+|...+
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa 58 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIA 58 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHH
Confidence 356778899997753 3 7899999999988875543
No 261
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=34.84 E-value=56 Score=30.75 Aligned_cols=30 Identities=27% Similarity=0.349 Sum_probs=23.1
Q ss_pred HHHHHHHHhC-CeEEEEEeChhHHHHHHHHhc
Q 035617 176 VFDHVYEQTG-QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 176 ~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
+.+.+ +..| .+-.++|||+|=..|+.++..
T Consensus 74 l~~~l-~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLL-RSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHH-HHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhh-cccccccceeeccchhhHHHHHHCCc
Confidence 33444 5668 899999999999998877654
No 262
>PRK12467 peptide synthase; Provisional
Probab=34.74 E-value=1e+02 Score=40.16 Aligned_cols=85 Identities=19% Similarity=0.132 Sum_probs=56.6
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHH
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDH 179 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~ 179 (422)
.+.++..|...+....+ ..++..+.. +..|+.+..++.-.-... .-++.++.. .-.++
T Consensus 3692 ~~~l~~~h~~~r~~~~~------~~l~~~l~~-~~~~~~l~~~~~~~d~~~-----------~~~~~~~~~----~y~~~ 3749 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDY------EPLAVILEG-DRHVLGLTCRHLLDDGWQ-----------DTSLQAMAV----QYADY 3749 (3956)
T ss_pred ccceeeechhhcchhhh------HHHHHHhCC-CCcEEEEeccccccccCC-----------ccchHHHHH----HHHHH
Confidence 45699999988776643 556666644 678888877664211110 124555553 45566
Q ss_pred HHHHhC-CeEEEEEeChhHHHHHHHHhc
Q 035617 180 VYEQTG-QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 180 i~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
++.... .+..+.|+|+||.++...+..
T Consensus 3750 ~~~~~~~~p~~l~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3750 ILWQQAKGPYGLLGWSLGGTLARLVAEL 3777 (3956)
T ss_pred HHHhccCCCeeeeeeecchHHHHHHHHH
Confidence 655555 789999999999999887664
No 263
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.31 E-value=48 Score=29.27 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=28.5
Q ss_pred CCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCC
Q 035617 98 IKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTR 142 (422)
Q Consensus 98 ~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~r 142 (422)
.+.|.+|++-|-.+..-. ..++..|+++||.|++---|
T Consensus 4 ~~~~k~VlItgcs~GGIG-------~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIG-------YALAKEFARNGYLVYATARR 41 (289)
T ss_pred ccCCCeEEEeecCCcchh-------HHHHHHHHhCCeEEEEEccc
Confidence 346778888876554443 67899999999999987544
No 264
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=32.97 E-value=62 Score=30.50 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=24.4
Q ss_pred HHHHHHHHHhCCe----E-EEEEeChhHHHHHHHHhcc
Q 035617 175 AVFDHVYEQTGQK----I-HYVGHSLGTLIALASFSEG 207 (422)
Q Consensus 175 ~~i~~i~~~~~~~----i-~l~G~S~Gg~~a~~~~~~~ 207 (422)
.+++.+.+..+.+ + .+.|.|+||.+|..++...
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 4566676655533 3 5899999999999998754
No 265
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=32.81 E-value=52 Score=30.48 Aligned_cols=30 Identities=27% Similarity=0.207 Sum_probs=22.7
Q ss_pred HHHHHHHHhC-CeEEEEEeChhHHHHHHHHhc
Q 035617 176 VFDHVYEQTG-QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 176 ~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
+.+.+ +..| .+-.++|||+|-..|+.++..
T Consensus 72 ~~~~l-~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLW-RSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHH-HHcCCcccEEEecCHHHHHHHHHhCC
Confidence 33444 4557 888999999999999887654
No 266
>PF11364 DUF3165: Protein of unknown function (DUF3165); InterPro: IPR021506 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=32.63 E-value=88 Score=22.68 Aligned_cols=28 Identities=32% Similarity=0.444 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035617 4 KAISKTRQDMALRGQFLIFCVLVLLVFE 31 (422)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (422)
|+++++.....+.++++++.+++++.+.
T Consensus 20 ksIr~Tln~i~~v~~~vlLivla~ls~~ 47 (81)
T PF11364_consen 20 KSIRGTLNMIGLVGLVVLLIVLAVLSFI 47 (81)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 6788887777777776666666555443
No 267
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=30.78 E-value=94 Score=29.68 Aligned_cols=76 Identities=21% Similarity=0.294 Sum_probs=46.1
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFD 178 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 178 (422)
.+.||+|-|-.+-+.-.-..|.| .++.+.+.++| -|+++++--.--|..... + ..|+.+-++
T Consensus 265 S~APVIFSHSsA~~vcns~rNVP-DdVL~llk~Ng-GvVMVnfy~~~isc~~~A-----------~-----v~~v~~Hi~ 326 (419)
T KOG4127|consen 265 SRAPVIFSHSSAYSVCNSSRNVP-DDVLQLLKENG-GVVMVNFYPGFISCSDRA-----------T-----VSDVADHIN 326 (419)
T ss_pred hcCceEeecccHHHHhcCccCCc-HHHHHHHhhcC-CEEEEEeecccccCCCcc-----------c-----HHHHHHHHH
Confidence 57899999975443322223455 57778888877 566666433111211110 2 266679999
Q ss_pred HHHHHhC-CeEEEEE
Q 035617 179 HVYEQTG-QKIHYVG 192 (422)
Q Consensus 179 ~i~~~~~-~~i~l~G 192 (422)
+|++..| +.|.+-|
T Consensus 327 hIr~VaG~~hIGlGg 341 (419)
T KOG4127|consen 327 HIRAVAGIDHIGLGG 341 (419)
T ss_pred HHHHhhccceeeccC
Confidence 9998888 7776644
No 268
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=30.74 E-value=71 Score=29.62 Aligned_cols=26 Identities=15% Similarity=-0.064 Sum_probs=20.9
Q ss_pred HHhC-CeEEEEEeChhHHHHHHHHhcc
Q 035617 182 EQTG-QKIHYVGHSLGTLIALASFSEG 207 (422)
Q Consensus 182 ~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 207 (422)
+..+ .+-.++|||+|=..|+.++..-
T Consensus 71 ~~~g~~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 71 LALLPRPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred HhcCCCCcEEeecCHHHHHHHHHhCCC
Confidence 4446 8899999999999988876643
No 269
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=30.16 E-value=57 Score=30.05 Aligned_cols=30 Identities=33% Similarity=0.310 Sum_probs=21.6
Q ss_pred HHHHHHhC-CeEEEEEeChhHHHHHHHHhcc
Q 035617 178 DHVYEQTG-QKIHYVGHSLGTLIALASFSEG 207 (422)
Q Consensus 178 ~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 207 (422)
+.+++..+ .+-.++|||+|=..|+.++..-
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 33333334 7889999999999888877643
No 270
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=30.14 E-value=39 Score=31.50 Aligned_cols=20 Identities=30% Similarity=0.439 Sum_probs=17.3
Q ss_pred CCCCCcEEEecCCCCCCccc
Q 035617 97 QIKRPPVLIQHGVLVDGLTW 116 (422)
Q Consensus 97 ~~~~~~vll~HG~~~~~~~~ 116 (422)
+..||.||=+||++|....|
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCCCCeEEEecCCCCCchhH
Confidence 35789999999999998876
No 271
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=29.92 E-value=88 Score=27.14 Aligned_cols=44 Identities=27% Similarity=0.191 Sum_probs=29.0
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCC
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTR 145 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G 145 (422)
.++||+++||-.+..-... ....+...|.++|.++.+.-++|.|
T Consensus 143 ~~~P~li~hG~~D~~Vp~~---~s~~~~~~L~~~g~~~~~~~~p~~g 186 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPS---QSLRLYNALRKAGKPVELLIFPGEG 186 (213)
T ss_dssp GGSEEEEEEETTBSSSTTH---HHHHHHHHHHHTTSSEEEEEETT-S
T ss_pred CCCCEEEEccCCCCccCHH---HHHHHHHHHHhcCCCEEEEEcCcCC
Confidence 4799999999866543221 1245777888889776666555544
No 272
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=29.63 E-value=57 Score=30.73 Aligned_cols=30 Identities=37% Similarity=0.443 Sum_probs=22.8
Q ss_pred HHHHHHHh-C-CeEEEEEeChhHHHHHHHHhc
Q 035617 177 FDHVYEQT-G-QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 177 i~~i~~~~-~-~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
..-+.++. + .+.++.|||+|=+.|+.++..
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag~ 105 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAGV 105 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHccc
Confidence 34444545 5 788999999999999988763
No 273
>COG0218 Predicted GTPase [General function prediction only]
Probab=28.48 E-value=75 Score=27.69 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.7
Q ss_pred ccEEEEEeCCCccCChh
Q 035617 354 LPLFVSYGGNDALADLT 370 (422)
Q Consensus 354 ~Pvlii~G~~D~~v~~~ 370 (422)
+|++++.-.-|.+-..+
T Consensus 136 i~~~vv~tK~DKi~~~~ 152 (200)
T COG0218 136 IPVIVVLTKADKLKKSE 152 (200)
T ss_pred CCeEEEEEccccCChhH
Confidence 79999999999997655
No 274
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=28.02 E-value=67 Score=26.84 Aligned_cols=36 Identities=33% Similarity=0.399 Sum_probs=21.3
Q ss_pred ccChHHHHhchHHHHHHHHHHHhC-----CeEEEEEeChhHH
Q 035617 162 NWSWDELVAYDLPAVFDHVYEQTG-----QKIHYVGHSLGTL 198 (422)
Q Consensus 162 ~~~~~~~~~~D~~~~i~~i~~~~~-----~~i~l~G~S~Gg~ 198 (422)
.++-.+++ .-+...-+.+.+..+ ++|.|+|.||+..
T Consensus 76 g~~a~~La-~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 76 GYSADELA-NKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp TEEHHHHH-HHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CCCHHHHH-HHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 44555544 222233377776653 7899999999988
No 275
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=26.51 E-value=78 Score=22.42 Aligned_cols=38 Identities=16% Similarity=0.234 Sum_probs=21.8
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHH-HHhCCCeEEEe--CCCCCC
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLI-LADHGFDVWIA--NTRGTR 145 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~-l~~~g~~v~~~--d~rG~G 145 (422)
.|.++++||......+ .+|.. -.++|..+..+ |+.-||
T Consensus 31 ~~~~~lvhGga~~GaD--------~iA~~wA~~~gv~~~~~~adW~~hG 71 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGAD--------RIAARWARERGVPVIRFPADWQRHG 71 (71)
T ss_pred CCCEEEEECCCCCCHH--------HHHHHHHHHCCCeeEEeCcChhhCC
Confidence 4788999998732222 23333 34567765554 555554
No 276
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=26.39 E-value=87 Score=30.21 Aligned_cols=132 Identities=11% Similarity=0.053 Sum_probs=72.4
Q ss_pred chhhhhhhcCceeeEEEEECCCCcEEEEEEeeCCCCCCCCCCCCCcEEEecCCCCCCcccccCC-CCCCHHHHHHhCCCe
Q 035617 57 ICASSVIIHGYKCQEIDVTTKDGYILNLQRIPEGRAAGGGQIKRPPVLIQHGVLVDGLTWLLNP-PEQNLPLILADHGFD 135 (422)
Q Consensus 57 ~~~~~~~~~~~~~e~~~v~t~dG~~l~~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~-~~~~l~~~l~~~g~~ 135 (422)
+-..+.+..|++++++..-...+..+...-+-..- +..++..||++||=+-|....++.. ....+++.+.++|+
T Consensus 132 NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L----~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l- 206 (396)
T COG1448 132 NHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADL----KTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL- 206 (396)
T ss_pred hHHHHHHhcCCceeeeeccccccccccHHHHHHHH----HhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-
Confidence 33456677788777765544443333322111100 1234678999999877655433322 11567777888774
Q ss_pred EEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhCCeEEEEEeChhHHHHHHHHhccchhhhHhh
Q 035617 136 VWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTGQKIHYVGHSLGTLIALASFSEGLQVDKLKS 215 (422)
Q Consensus 136 v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~v~~ 215 (422)
+-.+|.-=+|.-.+ ..+|..++--++ +. .+-.++..|.--..+++ .+||-+
T Consensus 207 ip~~D~AYQGF~~G-------------------leeDa~~lR~~a-~~--~~~~lva~S~SKnfgLY-------gERVGa 257 (396)
T COG1448 207 IPFFDIAYQGFADG-------------------LEEDAYALRLFA-EV--GPELLVASSFSKNFGLY-------GERVGA 257 (396)
T ss_pred eeeeehhhhhhccc-------------------hHHHHHHHHHHH-Hh--CCcEEEEehhhhhhhhh-------hhccce
Confidence 44567555554443 235655544444 11 23377777766555443 258888
Q ss_pred eeeecch
Q 035617 216 AALLSPI 222 (422)
Q Consensus 216 ~v~~~p~ 222 (422)
+.+++.-
T Consensus 258 ~~vva~~ 264 (396)
T COG1448 258 LSVVAED 264 (396)
T ss_pred eEEEeCC
Confidence 8888753
No 277
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=25.05 E-value=97 Score=20.37 Aligned_cols=25 Identities=20% Similarity=0.531 Sum_probs=13.7
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHh
Q 035617 6 ISKT-RQDMALRGQFLIFCVLVLLVF 30 (422)
Q Consensus 6 ~~~~-~~~~~~~~~~~~~~~~~~~~~ 30 (422)
.++. +.++++++++++++++++..+
T Consensus 9 ~~~f~~nk~a~~gl~il~~~vl~ai~ 34 (56)
T PF12911_consen 9 WRRFRRNKLAVIGLIILLILVLLAIF 34 (56)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3444 445777776666555544333
No 278
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=24.26 E-value=72 Score=27.30 Aligned_cols=23 Identities=17% Similarity=0.121 Sum_probs=13.7
Q ss_pred chHHHHHHHHHHHhC-CeEEEEEe
Q 035617 171 YDLPAVFDHVYEQTG-QKIHYVGH 193 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~-~~i~l~G~ 193 (422)
.-+...++.+++..+ .+|.++-+
T Consensus 78 ~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 78 ERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp HHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred HHHHHHHHHHHHhCCCCCEEEEec
Confidence 445577777777776 77777654
No 279
>TIGR03586 PseI pseudaminic acid synthase.
Probab=24.24 E-value=2.7e+02 Score=26.45 Aligned_cols=81 Identities=17% Similarity=0.254 Sum_probs=51.1
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCC-eEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHH
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGF-DVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVF 177 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~-~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i 177 (422)
.+.||++--|.+ +-..| ..-+.++.+.|- +|.+... -|.- +. +.. + -|+ ..+
T Consensus 133 ~gkPvilstG~~-t~~Ei------~~Av~~i~~~g~~~i~LlhC----~s~Y-P~--~~~----~--------~nL-~~i 185 (327)
T TIGR03586 133 TGKPIIMSTGIA-TLEEI------QEAVEACREAGCKDLVLLKC----TSSY-PA--PLE----D--------ANL-RTI 185 (327)
T ss_pred cCCcEEEECCCC-CHHHH------HHHHHHHHHCCCCcEEEEec----CCCC-CC--Ccc----c--------CCH-HHH
Confidence 467888999994 66666 455666777787 6777762 1221 11 100 1 122 456
Q ss_pred HHHHHHhCCeEEEEEeChhHHHHHHHHhc
Q 035617 178 DHVYEQTGQKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 178 ~~i~~~~~~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
..+.+.++-+|.+.+|+.|-.++..+.+.
T Consensus 186 ~~lk~~f~~pVG~SDHt~G~~~~~aAva~ 214 (327)
T TIGR03586 186 PDLAERFNVPVGLSDHTLGILAPVAAVAL 214 (327)
T ss_pred HHHHHHhCCCEEeeCCCCchHHHHHHHHc
Confidence 66777777788889999997666665543
No 280
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=23.67 E-value=37 Score=28.73 Aligned_cols=34 Identities=32% Similarity=0.356 Sum_probs=27.1
Q ss_pred CCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEE
Q 035617 99 KRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWI 138 (422)
Q Consensus 99 ~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~ 138 (422)
..+.|+++-|-+.+..+ ....|++|.++|++|.+
T Consensus 24 ~~~~v~il~G~GnNGgD------gl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGD------GLVAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHH------HHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHH------HHHHHHHHHHCCCeEEE
Confidence 46789999999888877 46789999999999888
No 281
>PRK10279 hypothetical protein; Provisional
Probab=23.61 E-value=1e+02 Score=28.93 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=24.6
Q ss_pred HHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhcc
Q 035617 175 AVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEG 207 (422)
Q Consensus 175 ~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 207 (422)
-+++.+.+ .+ ..=.+.|-|+|+.++..+|+..
T Consensus 22 GVL~aL~E-~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 22 GVINALKK-VGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHH-cCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 45666644 46 6678999999999999998753
No 282
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=23.36 E-value=92 Score=31.85 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=21.4
Q ss_pred HHhC-CeEEEEEeChhHHHHHHHHhc
Q 035617 182 EQTG-QKIHYVGHSLGTLIALASFSE 206 (422)
Q Consensus 182 ~~~~-~~i~l~G~S~Gg~~a~~~~~~ 206 (422)
+..| .+-.++|||+|=..|+.+|.-
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGV 285 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCC
Confidence 5667 888999999999999987764
No 283
>COG0400 Predicted esterase [General function prediction only]
Probab=23.16 E-value=1.4e+02 Score=26.28 Aligned_cols=45 Identities=22% Similarity=0.301 Sum_probs=32.6
Q ss_pred CCCCCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCC-CC
Q 035617 97 QIKRPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTR-GT 144 (422)
Q Consensus 97 ~~~~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~r-G~ 144 (422)
+....+|++.||-.+..-.-. ....+.+.|...|.+|..-++. ||
T Consensus 143 ~~~~~pill~hG~~Dpvvp~~---~~~~l~~~l~~~g~~v~~~~~~~GH 188 (207)
T COG0400 143 DLAGTPILLSHGTEDPVVPLA---LAEALAEYLTASGADVEVRWHEGGH 188 (207)
T ss_pred ccCCCeEEEeccCcCCccCHH---HHHHHHHHHHHcCCCEEEEEecCCC
Confidence 356789999999977542211 1256778888999999998886 44
No 284
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=22.56 E-value=3e+02 Score=23.32 Aligned_cols=53 Identities=17% Similarity=0.280 Sum_probs=38.1
Q ss_pred HHhCCCeEEEeCCCCCCCCCCCCCCCCCcccccccChHHHHhchHHHHHHHHHHHhC-CeEEEEEeChhH
Q 035617 129 LADHGFDVWIANTRGTRFSRRHTSLDPSQMEFWNWSWDELVAYDLPAVFDHVYEQTG-QKIHYVGHSLGT 197 (422)
Q Consensus 129 l~~~g~~v~~~d~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~i~~~~~-~~i~l~G~S~Gg 197 (422)
|.+.|++.+++|.=++=-...... ...++..+++.+++..+ ++|.++-.|.|.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~~----------------i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYEDE----------------IPPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcCc----------------CCHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 778899999999887632221111 11456688888888777 799999999874
No 285
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=22.41 E-value=1.1e+02 Score=26.83 Aligned_cols=45 Identities=20% Similarity=0.241 Sum_probs=28.8
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCCCCCCC
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTRGTRFS 147 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~rG~G~S 147 (422)
+.+|+++||-.+..-.... .....+.|.+.|.+|-.-.+.|-|.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~---~~~~~~~L~~~~~~v~~~~~~g~gH~ 199 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEW---AEKTAEFLKAAGANVEFHEYPGGGHE 199 (216)
T ss_dssp TS-EEEEEETT-SSSTHHH---HHHHHHHHHCTT-GEEEEEETT-SSS
T ss_pred CCcEEEEecCCCCcccHHH---HHHHHHHHHhcCCCEEEEEcCCCCCC
Confidence 5689999999776543211 35677788888988887777765543
No 286
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=22.19 E-value=1.1e+02 Score=28.74 Aligned_cols=32 Identities=25% Similarity=0.247 Sum_probs=24.5
Q ss_pred HHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhcc
Q 035617 175 AVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEG 207 (422)
Q Consensus 175 ~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 207 (422)
.+++.+.+. + ..=.++|-|+|+.++..+++..
T Consensus 32 GvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 456666443 6 6557899999999999998864
No 287
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=22.10 E-value=1.3e+02 Score=25.25 Aligned_cols=33 Identities=24% Similarity=0.155 Sum_probs=25.0
Q ss_pred HHHHHHHHHhC-CeEEEEEeChhHHHHHHHHhccc
Q 035617 175 AVFDHVYEQTG-QKIHYVGHSLGTLIALASFSEGL 208 (422)
Q Consensus 175 ~~i~~i~~~~~-~~i~l~G~S~Gg~~a~~~~~~~~ 208 (422)
.+++.+.++ + ..-.+.|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 455556443 5 66689999999999999988654
No 288
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=21.71 E-value=60 Score=29.92 Aligned_cols=30 Identities=27% Similarity=0.184 Sum_probs=22.8
Q ss_pred CCcEEEecCCCCCCcccccCCCCCCHHHHHHhCCCeEEEeCCC
Q 035617 100 RPPVLIQHGVLVDGLTWLLNPPEQNLPLILADHGFDVWIANTR 142 (422)
Q Consensus 100 ~~~vll~HG~~~~~~~~~~~~~~~~l~~~l~~~g~~v~~~d~r 142 (422)
-|-|+|.-|.++.-+ .|++.||+|+.+|+-
T Consensus 252 vPmi~fakG~g~~Le-------------~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 252 VPMILFAKGSGGALE-------------ELAQTGYDVVGLDWT 281 (359)
T ss_pred CceEEEEcCcchHHH-------------HHHhcCCcEEeeccc
Confidence 478888888744333 488999999999874
No 289
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=21.23 E-value=68 Score=29.25 Aligned_cols=13 Identities=46% Similarity=0.749 Sum_probs=11.8
Q ss_pred CeEEEEEeChhHH
Q 035617 186 QKIHYVGHSLGTL 198 (422)
Q Consensus 186 ~~i~l~G~S~Gg~ 198 (422)
..|+++|||+|..
T Consensus 235 ~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 235 DEIIIYGHSLGEV 247 (270)
T ss_pred CEEEEEeCCCchh
Confidence 8899999999975
No 290
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.98 E-value=1.3e+02 Score=23.77 Aligned_cols=31 Identities=23% Similarity=0.266 Sum_probs=24.2
Q ss_pred chHHHHHHHHHHHhC-CeEEEEEeChhHHHHH
Q 035617 171 YDLPAVFDHVYEQTG-QKIHYVGHSLGTLIAL 201 (422)
Q Consensus 171 ~D~~~~i~~i~~~~~-~~i~l~G~S~Gg~~a~ 201 (422)
.++.+.++|.....+ +.|.++||+--|++..
T Consensus 43 ~~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 43 LDVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred ccHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 356688888888889 9999999976665543
No 291
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=20.08 E-value=1.3e+02 Score=28.23 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=22.3
Q ss_pred HHHHHHHHHhCCe----E-EEEEeChhHHHHHHHHh
Q 035617 175 AVFDHVYEQTGQK----I-HYVGHSLGTLIALASFS 205 (422)
Q Consensus 175 ~~i~~i~~~~~~~----i-~l~G~S~Gg~~a~~~~~ 205 (422)
.++..+.++.+.+ + .+.|-|.||.+|+.++.
T Consensus 25 ~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 25 EILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred HHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 4555665555533 2 38999999999998876
Done!