Query 035619
Match_columns 188
No_of_seqs 169 out of 1072
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 04:37:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035619.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035619hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 1.2E-34 2.5E-39 254.8 13.5 146 16-181 152-299 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 2.2E-34 4.7E-39 248.2 13.0 159 3-181 100-268 (315)
3 cd01847 Triacylglycerol_lipase 100.0 1.3E-30 2.8E-35 221.3 14.8 149 3-181 86-237 (281)
4 PRK15381 pathogenicity island 100.0 8.6E-29 1.9E-33 221.0 16.1 135 3-181 224-358 (408)
5 cd01846 fatty_acyltransferase_ 99.9 7.1E-27 1.5E-31 196.2 15.0 151 3-182 82-232 (270)
6 COG3240 Phospholipase/lecithin 99.6 5.6E-16 1.2E-20 135.7 9.3 130 18-180 158-287 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.5 9.8E-14 2.1E-18 111.6 10.7 129 18-172 79-217 (234)
8 cd01836 FeeA_FeeB_like SGNH_hy 97.0 0.0089 1.9E-07 47.1 9.6 97 20-160 66-162 (191)
9 cd00229 SGNH_hydrolase SGNH_hy 96.6 0.025 5.3E-07 42.1 9.5 97 19-162 63-160 (187)
10 cd01834 SGNH_hydrolase_like_2 96.6 0.03 6.5E-07 43.5 10.2 101 22-165 62-163 (191)
11 cd01839 SGNH_arylesterase_like 96.5 0.0099 2.1E-07 47.7 7.1 101 21-159 79-179 (208)
12 cd01833 XynB_like SGNH_hydrola 96.4 0.045 9.7E-07 41.7 9.7 93 20-161 39-131 (157)
13 cd01829 SGNH_hydrolase_peri2 S 96.2 0.054 1.2E-06 42.8 9.7 97 21-161 59-155 (200)
14 cd01841 NnaC_like NnaC (CMP-Ne 96.2 0.039 8.5E-07 42.7 8.7 92 21-161 51-142 (174)
15 cd01823 SEST_like SEST_like. A 96.2 0.06 1.3E-06 44.5 10.2 117 22-161 81-217 (259)
16 cd04506 SGNH_hydrolase_YpmR_li 96.2 0.11 2.3E-06 41.4 11.1 104 21-161 68-175 (204)
17 PF13472 Lipase_GDSL_2: GDSL-l 96.0 0.12 2.7E-06 38.7 10.5 95 21-161 61-155 (179)
18 cd01838 Isoamyl_acetate_hydrol 96.0 0.086 1.9E-06 41.2 9.7 106 21-161 63-168 (199)
19 cd01820 PAF_acetylesterase_lik 95.8 0.084 1.8E-06 42.7 9.1 89 21-160 89-177 (214)
20 cd01832 SGNH_hydrolase_like_1 95.3 0.16 3.5E-06 39.5 8.9 89 21-160 67-156 (185)
21 cd01824 Phospholipase_B_like P 95.0 0.17 3.7E-06 43.6 8.8 108 23-152 121-239 (288)
22 cd01830 XynE_like SGNH_hydrola 94.9 0.12 2.6E-06 41.4 7.3 56 23-98 76-131 (204)
23 cd01828 sialate_O-acetylestera 94.9 0.2 4.4E-06 38.5 8.2 89 21-161 48-136 (169)
24 cd04501 SGNH_hydrolase_like_4 94.6 0.34 7.3E-06 37.7 9.0 93 22-163 60-152 (183)
25 cd01821 Rhamnogalacturan_acety 93.0 1.1 2.4E-05 35.4 9.3 97 21-164 65-161 (198)
26 cd04502 SGNH_hydrolase_like_7 92.6 2 4.3E-05 33.1 10.1 88 21-161 50-138 (171)
27 cd01835 SGNH_hydrolase_like_3 91.7 1.4 3E-05 34.6 8.2 31 124-161 131-161 (193)
28 cd01826 acyloxyacyl_hydrolase_ 91.3 2.6 5.7E-05 36.9 10.1 56 22-97 123-180 (305)
29 cd01844 SGNH_hydrolase_like_6 91.3 2.4 5.2E-05 33.0 9.2 91 21-159 57-148 (177)
30 cd01827 sialate_O-acetylestera 90.6 2.4 5.2E-05 32.9 8.7 52 21-97 67-119 (188)
31 cd01825 SGNH_hydrolase_peri1 S 89.2 2.1 4.5E-05 33.1 7.2 93 22-161 57-149 (189)
32 PRK10528 multifunctional acyl- 87.5 3.5 7.7E-05 32.7 7.7 45 21-92 71-115 (191)
33 KOG3035 Isoamyl acetate-hydrol 87.2 5.5 0.00012 33.5 8.7 117 15-162 62-178 (245)
34 PF02633 Creatininase: Creatin 81.5 12 0.00026 30.9 8.6 61 57-163 85-145 (237)
35 cd01840 SGNH_hydrolase_yrhL_li 80.6 8 0.00017 29.4 6.7 13 22-35 51-63 (150)
36 PLN02757 sirohydrochlorine fer 80.4 9.5 0.00021 29.9 7.1 67 60-168 60-129 (154)
37 cd01831 Endoglucanase_E_like E 80.3 19 0.00042 27.5 8.9 38 22-70 56-93 (169)
38 COG3240 Phospholipase/lecithin 79.1 3 6.4E-05 37.5 4.3 69 21-106 98-166 (370)
39 PRK13384 delta-aminolevulinic 71.4 15 0.00032 32.5 6.5 63 56-155 59-121 (322)
40 cd00384 ALAD_PBGS Porphobilino 70.9 16 0.00035 32.1 6.6 63 56-155 49-111 (314)
41 KOG3670 Phospholipase [Lipid t 69.5 8.9 0.00019 34.8 4.8 43 23-70 186-228 (397)
42 cd04824 eu_ALAD_PBGS_cysteine_ 68.6 18 0.00038 31.9 6.4 65 56-155 49-114 (320)
43 cd04823 ALAD_PBGS_aspartate_ri 67.5 19 0.0004 31.8 6.3 64 56-155 52-116 (320)
44 PRK09283 delta-aminolevulinic 64.4 24 0.00053 31.2 6.4 63 56-155 57-119 (323)
45 cd01822 Lysophospholipase_L1_l 64.2 25 0.00054 26.6 6.0 37 21-70 64-100 (177)
46 COG2845 Uncharacterized protei 62.2 35 0.00077 30.4 7.0 98 21-162 177-274 (354)
47 PF00490 ALAD: Delta-aminolevu 61.2 32 0.00069 30.4 6.6 64 57-155 56-119 (324)
48 COG2755 TesA Lysophospholipase 59.7 39 0.00084 26.7 6.5 14 22-36 78-91 (216)
49 cd03416 CbiX_SirB_N Sirohydroc 52.1 44 0.00096 23.4 5.1 53 60-154 46-98 (101)
50 COG3581 Uncharacterized protei 49.3 21 0.00046 32.5 3.6 42 85-156 332-373 (420)
51 PF08885 GSCFA: GSCFA family; 48.3 54 0.0012 27.9 5.8 85 53-168 147-231 (251)
52 PF01903 CbiX: CbiX; InterPro 47.3 16 0.00035 25.9 2.2 24 134-157 71-94 (105)
53 cd03414 CbiX_SirB_C Sirohydroc 40.6 1.1E+02 0.0024 21.9 5.9 21 134-155 78-98 (117)
54 PF08331 DUF1730: Domain of un 39.1 62 0.0013 22.1 4.0 70 80-155 5-78 (78)
55 PRK13717 conjugal transfer pro 38.8 66 0.0014 24.7 4.4 28 120-147 70-97 (128)
56 COG0113 HemB Delta-aminolevuli 37.4 1.4E+02 0.003 26.5 6.6 65 56-155 59-123 (330)
57 PF09907 DUF2136: Uncharacteri 36.4 21 0.00046 24.8 1.3 29 8-37 22-50 (76)
58 KOG4079 Putative mitochondrial 35.6 20 0.00043 28.1 1.1 14 85-98 44-57 (169)
59 TIGR02744 TrbI_Ftype type-F co 35.4 28 0.0006 26.1 1.8 31 120-150 57-87 (112)
60 KOG0907 Thioredoxin [Posttrans 30.2 75 0.0016 23.2 3.4 30 133-163 38-67 (106)
61 COG4053 Uncharacterized protei 29.7 2.8E+02 0.0062 23.0 6.9 27 55-95 23-49 (244)
62 PF06908 DUF1273: Protein of u 29.0 1.6E+02 0.0034 23.6 5.4 28 52-93 23-50 (177)
63 cd01823 SEST_like SEST_like. A 29.0 1.2E+02 0.0025 24.7 4.8 36 122-157 121-156 (259)
64 PF12905 Glyco_hydro_101: Endo 28.0 69 0.0015 29.4 3.4 27 131-157 157-183 (425)
65 KOG2794 Delta-aminolevulinic a 27.9 1.8E+02 0.0038 25.5 5.7 66 55-155 66-131 (340)
66 cd04506 SGNH_hydrolase_YpmR_li 27.5 1.8E+02 0.0039 22.5 5.6 33 124-156 98-130 (204)
67 PF12872 OST-HTH: OST-HTH/LOTU 27.2 63 0.0014 21.2 2.4 26 149-174 23-50 (74)
68 COG4531 ZnuA ABC-type Zn2+ tra 26.2 2.2E+02 0.0047 25.0 6.0 46 123-174 182-231 (318)
69 TIGR02089 TTC tartrate dehydro 25.2 1.1E+02 0.0023 27.5 4.1 39 132-170 198-236 (352)
70 COG1182 AcpD Acyl carrier prot 25.1 99 0.0021 25.6 3.6 27 132-158 20-46 (202)
71 PF08029 HisG_C: HisG, C-termi 23.9 79 0.0017 21.8 2.4 20 61-94 53-72 (75)
72 cd02957 Phd_like Phosducin (Ph 23.7 1.8E+02 0.0038 20.7 4.5 26 133-158 41-66 (113)
73 PRK03437 3-isopropylmalate deh 23.3 1E+02 0.0022 27.5 3.6 39 132-170 195-233 (344)
74 cd02989 Phd_like_TxnDC9 Phosdu 22.8 1.3E+02 0.0027 21.8 3.5 27 133-159 39-65 (113)
75 PF15001 AP-5_subunit_s1: AP-5 22.1 2.1E+02 0.0046 23.4 4.9 25 14-39 94-118 (189)
76 PRK13660 hypothetical protein; 21.9 4.3E+02 0.0093 21.3 7.4 27 53-93 24-50 (182)
77 PRK08194 tartrate dehydrogenas 21.8 1.3E+02 0.0028 26.9 4.0 39 132-170 195-233 (352)
78 COG0533 QRI7 Metal-dependent p 21.7 4.9E+02 0.011 23.3 7.5 58 50-154 239-296 (342)
79 PF09677 TrbI_Ftype: Type-F co 21.6 2E+02 0.0044 21.3 4.4 26 120-145 56-81 (111)
80 PRK08997 isocitrate dehydrogen 21.6 1.6E+02 0.0034 26.2 4.4 39 132-170 182-220 (334)
81 PLN00123 isocitrate dehydrogen 21.5 1.4E+02 0.0031 26.8 4.2 40 131-170 202-241 (360)
82 TIGR00175 mito_nad_idh isocitr 21.4 1.1E+02 0.0025 27.0 3.5 41 130-170 178-218 (333)
83 PF00180 Iso_dh: Isocitrate/is 21.4 1.8E+02 0.0039 25.7 4.8 38 133-170 195-233 (348)
84 COG5630 ARG2 Acetylglutamate s 21.3 1.2E+02 0.0025 27.9 3.5 42 47-102 58-99 (495)
85 TIGR01091 upp uracil phosphori 21.2 3.4E+02 0.0074 21.9 6.1 48 58-156 136-183 (207)
86 TIGR03455 HisG_C-term ATP phos 20.9 1.3E+02 0.0028 21.8 3.1 22 59-94 75-96 (100)
87 PLN00118 isocitrate dehydrogen 20.8 1.3E+02 0.0029 27.1 3.9 41 130-170 217-257 (372)
88 PF05692 Myco_haema: Mycoplasm 20.3 1.1E+02 0.0023 28.2 3.1 30 7-36 278-308 (439)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=1.2e-34 Score=254.81 Aligned_cols=146 Identities=20% Similarity=0.268 Sum_probs=127.6
Q ss_pred CCCCCCCCeEEEeeccccchhhhccCCc--chhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEec
Q 035619 16 RPEDFSKALHTRLWTEGNLTPTGYLNKK--VAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSII 93 (188)
Q Consensus 16 ~~~~~~~sL~~i~~iG~ND~~~~~~~~~--~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~n 93 (188)
+++.+++|||+| |||+|||..+|+..+ .....+++|++.+++.+++.|++||+. |||+|+|+|
T Consensus 152 ~~~~~~~sL~~i-~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~--------------GAR~~~V~~ 216 (351)
T PLN03156 152 ANEIISEALYLI-SIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRL--------------GARKISLGG 216 (351)
T ss_pred HHHHHhcCeEEE-EecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHc--------------CCCEEEecC
Confidence 345689999999 999999986554211 112346789999999999999999999 999999999
Q ss_pred CCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcCCCc
Q 035619 94 LLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYGLFY 173 (188)
Q Consensus 94 lpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yGf~~ 173 (188)
+||+||+|..+.... .+..+|.+.+|.+++.||.+|++++++|++++||++|+++|+|+++.++++||++|||++
T Consensus 217 lpplGc~P~~~~~~~-----~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~ 291 (351)
T PLN03156 217 LPPMGCLPLERTTNL-----MGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEV 291 (351)
T ss_pred CCccccCHHHHhhcC-----CCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCccc
Confidence 999999998765421 134679999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCC
Q 035619 174 ANMNSDFS 181 (188)
Q Consensus 174 ~~~aCc~~ 181 (188)
++++||+.
T Consensus 292 ~~~aCCg~ 299 (351)
T PLN03156 292 TSVACCAT 299 (351)
T ss_pred CCccccCC
Confidence 99999973
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=2.2e-34 Score=248.22 Aligned_cols=159 Identities=25% Similarity=0.329 Sum_probs=136.2
Q ss_pred HHHHHhhhhCCCC----------CCCCCCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 035619 3 FSAKISGIRNSLP----------RPEDFSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFH 72 (188)
Q Consensus 3 ~~~~~~~~~~~~~----------~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~ 72 (188)
+..||++|....+ +++.++++||+| |||+|||...+........+..++++.+|+++.++|++||+.
T Consensus 100 l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~L~~~-- 176 (315)
T cd01837 100 LSVQLEYFKEYKERLRALVGEEAAADILSKSLFLI-SIGSNDYLNNYFANPTRQYEVEAYVPFLVSNISSAIKRLYDL-- 176 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEE-EecccccHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 4567777764432 235689999999 999999987653222102356789999999999999999999
Q ss_pred hhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEE
Q 035619 73 FILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIH 152 (188)
Q Consensus 73 ~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~ 152 (188)
|||+|+|+|+||+||+|..+.... .+..+|.+.+|++++.||.+|+++|++|++++|+++|++
T Consensus 177 ------------GAr~~~v~~lpplgc~P~~~~~~~-----~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 239 (315)
T cd01837 177 ------------GARKFVVPGLGPLGCLPSQRTLFG-----GDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVY 239 (315)
T ss_pred ------------CCcEEEecCCCCcCccHHHHhhcC-----CCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999999999999999999876542 134689999999999999999999999999999999999
Q ss_pred EechHHHHHHHHhhhhcCCCccCcCCCCC
Q 035619 153 VDIYSAKYTLITQAKKYGLFYANMNSDFS 181 (188)
Q Consensus 153 ~D~y~~~~~ii~nP~~yGf~~~~~aCc~~ 181 (188)
+|+|+++.++++||++|||+++.++||++
T Consensus 240 ~D~y~~~~~i~~np~~yGf~~~~~aCc~~ 268 (315)
T cd01837 240 ADIYNALLDLIQNPAKYGFENTLKACCGT 268 (315)
T ss_pred EehhHHHHHHHhChhhcCCcCCCcCccCC
Confidence 99999999999999999999999999975
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=99.97 E-value=1.3e-30 Score=221.30 Aligned_cols=149 Identities=15% Similarity=0.118 Sum_probs=128.4
Q ss_pred HHHHHhhhhCCCCCCCCCCCCeEEEeeccccchhhhccCCcc---hhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 035619 3 FSAKISGIRNSLPRPEDFSKALHTRLWTEGNLTPTGYLNKKV---AAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHR 79 (188)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~---~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~ 79 (188)
+.+||+++..... ..++++||+| |+|+|||...+..... ...+..++++.+++.+..++++||+.
T Consensus 86 l~~Qv~~f~~~~~--~~~~~sL~~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~--------- 153 (281)
T cd01847 86 VTTQIANYLAAGG--GFDPNALYTV-WIGGNDLIAALAALTTATTTQAAAVAAAATAAADLASQVKNLLDA--------- 153 (281)
T ss_pred HHHHHHHHHHhcC--CCCCCeEEEE-ecChhHHHHHHhhccccccchhhHHHHHHHHHHHHHHHHHHHHHC---------
Confidence 4678988885543 3579999999 9999999976533221 12346789999999999999999999
Q ss_pred cccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHH
Q 035619 80 NFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAK 159 (188)
Q Consensus 80 ~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~ 159 (188)
|||+|+|+|+||+||+|..+... ..|.+.+|++++.||.+|+++|++|+.+ +|+++|+|+++
T Consensus 154 -----GAr~ilv~~lpplgc~P~~~~~~---------~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~ 215 (281)
T cd01847 154 -----GARYILVPNLPDVSYTPEAAGTP---------AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLL 215 (281)
T ss_pred -----CCCEEEEeCCCCcccCcchhhcc---------chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHH
Confidence 99999999999999999887642 3588999999999999999999998754 89999999999
Q ss_pred HHHHHhhhhcCCCccCcCCCCC
Q 035619 160 YTLITQAKKYGLFYANMNSDFS 181 (188)
Q Consensus 160 ~~ii~nP~~yGf~~~~~aCc~~ 181 (188)
.++++||++|||++++++||+.
T Consensus 216 ~~i~~nP~~yGf~~~~~~CC~~ 237 (281)
T cd01847 216 KEVVANPAAYGFTNTTTPACTS 237 (281)
T ss_pred HHHHhChHhcCccCCCccccCC
Confidence 9999999999999999999983
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=99.96 E-value=8.6e-29 Score=221.02 Aligned_cols=135 Identities=12% Similarity=0.054 Sum_probs=117.4
Q ss_pred HHHHHhhhhCCCCCCCCCCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccc
Q 035619 3 FSAKISGIRNSLPRPEDFSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFT 82 (188)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~ 82 (188)
+.+|++++... +++||+| |+|+|||.. | ..++++.+|+++..+|++||++
T Consensus 224 L~~Qv~~~~~~-------~~aL~lV-~iG~NDy~~-~---------~~~~v~~vV~~~~~~l~~Ly~l------------ 273 (408)
T PRK15381 224 TDRQVASYTPS-------HQDLAIF-LLGANDYMT-L---------HKDNVIMVVEQQIDDIEKIISG------------ 273 (408)
T ss_pred HHHHHHHHHhc-------CCcEEEE-EeccchHHH-h---------HHHHHHHHHHHHHHHHHHHHHc------------
Confidence 45677765421 6899999 999999973 3 1346788999999999999999
Q ss_pred CCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHH
Q 035619 83 KKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTL 162 (188)
Q Consensus 83 ~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~i 162 (188)
|||+|+|+|+||+||+|..+.. ...+.+|.+++.||.+|+++|++|++++||++|+++|+|+++.++
T Consensus 274 --GARk~vV~nlpPlGC~P~~~~~-----------~~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~i 340 (408)
T PRK15381 274 --GVNNVLVMGIPDLSLTPYGKHS-----------DEKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVI 340 (408)
T ss_pred --CCcEEEEeCCCCCCCcchhhcc-----------CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHH
Confidence 9999999999999999987632 124789999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCCccCcCCCCC
Q 035619 163 ITQAKKYGLFYANMNSDFS 181 (188)
Q Consensus 163 i~nP~~yGf~~~~~aCc~~ 181 (188)
++||++|||++++. ||+.
T Consensus 341 i~nP~~yGF~~~~~-cCg~ 358 (408)
T PRK15381 341 MEAASNIGYDTENP-YTHH 358 (408)
T ss_pred HhCHHhcCCCcccc-ccCC
Confidence 99999999998876 8863
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=99.95 E-value=7.1e-27 Score=196.19 Aligned_cols=151 Identities=11% Similarity=0.098 Sum_probs=129.9
Q ss_pred HHHHHhhhhCCCCCCCCCCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccc
Q 035619 3 FSAKISGIRNSLPRPEDFSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFT 82 (188)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~ 82 (188)
+.+|+.++....+. ...+++|++| |+|+||+...+.. . .....+++.+++++...|++|++.
T Consensus 82 l~~Qv~~f~~~~~~-~~~~~~l~~i-~~G~ND~~~~~~~-~---~~~~~~~~~~~~~~~~~i~~l~~~------------ 143 (270)
T cd01846 82 LSDQVAAFLAAHKL-RLPPDTLVAI-WIGANDLLNALDL-P---QNPDTLVTRAVDNLFQALQRLYAA------------ 143 (270)
T ss_pred HHHHHHHHHHhccC-CCCCCcEEEE-Eeccchhhhhccc-c---ccccccHHHHHHHHHHHHHHHHHC------------
Confidence 56788888765543 5568899999 9999999875432 1 233567889999999999999999
Q ss_pred CCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHH
Q 035619 83 KKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTL 162 (188)
Q Consensus 83 ~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~i 162 (188)
|+|+|+|+++||+||+|..+..... . .+.+|.+++.||.+|++++++|++++|+++|+++|+|+++.++
T Consensus 144 --g~~~i~v~~~p~~~~~P~~~~~~~~-------~--~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~ 212 (270)
T cd01846 144 --GARNFLVLNLPDLGLTPAFQAQGDA-------V--AARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDI 212 (270)
T ss_pred --CCCEEEEeCCCCCCCCcccccCCcc-------c--HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHH
Confidence 9999999999999999998765321 1 2789999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCCccCcCCCCCC
Q 035619 163 ITQAKKYGLFYANMNSDFSD 182 (188)
Q Consensus 163 i~nP~~yGf~~~~~aCc~~~ 182 (188)
++||++|||+++..+||++.
T Consensus 213 ~~~p~~yGf~~~~~~C~~~~ 232 (270)
T cd01846 213 LDNPAAYGFTNVTDPCLDYV 232 (270)
T ss_pred HhCHHhcCCCcCcchhcCCC
Confidence 99999999999999999853
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.65 E-value=5.6e-16 Score=135.75 Aligned_cols=130 Identities=15% Similarity=0.083 Sum_probs=106.2
Q ss_pred CCCCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCC
Q 035619 18 EDFSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPI 97 (188)
Q Consensus 18 ~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlppl 97 (188)
..-.+.|+.+ |.|+|||...-..+ ....+.+.......+...+++|.+. |||+++|+++|++
T Consensus 158 ~l~p~~l~~~-~ggand~~~~~~~~---a~~~q~~~~~~~~~~~~~Vq~L~~A--------------GA~~i~v~~lpDl 219 (370)
T COG3240 158 GLDPSALYFL-WGGANDYLALPMLK---AAAYQQLEGSTKADQSSAVQRLIAA--------------GARNILVMTLPDL 219 (370)
T ss_pred ccCHHHHHHH-hhcchhhhcccccc---hhhhHHHhcchhhHHHHHHHHHHHh--------------hccEEEEeecccc
Confidence 4556789999 99999998642221 2233445555577899999999999 9999999999999
Q ss_pred CCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcCCCccCcC
Q 035619 98 GCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYGLFYANMN 177 (188)
Q Consensus 98 Gc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yGf~~~~~a 177 (188)
+.+|....... -...+.+.+..||..|+..|++++ .+|+.+|+|.+++++++||++|||+|++..
T Consensus 220 ~l~P~~~~~~~----------~~~~a~~~t~~~Na~L~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~ 284 (370)
T COG3240 220 SLTPAGKAYGT----------EAIQASQATIAFNASLTSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAP 284 (370)
T ss_pred ccccccccccc----------hHHHHHHHHHHHHHHHHHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCc
Confidence 99998765311 122678899999999999999885 899999999999999999999999999987
Q ss_pred CCC
Q 035619 178 SDF 180 (188)
Q Consensus 178 Cc~ 180 (188)
||.
T Consensus 285 ~c~ 287 (370)
T COG3240 285 ACD 287 (370)
T ss_pred ccC
Confidence 765
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.52 E-value=9.8e-14 Score=111.57 Aligned_cols=129 Identities=25% Similarity=0.335 Sum_probs=105.1
Q ss_pred CCCCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCcc-----EEEEe
Q 035619 18 EDFSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQE-----YFGSI 92 (188)
Q Consensus 18 ~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR-----~f~v~ 92 (188)
...+.++++| |+|+||++... . .......++.+++.+.+.|++|++. |+| +++++
T Consensus 79 ~~~~~~lv~i-~~G~ND~~~~~---~--~~~~~~~~~~~~~~~~~~i~~l~~~--------------~~~~~~~~~~~~~ 138 (234)
T PF00657_consen 79 SFYDPDLVVI-WIGTNDYFNNR---D--SSDNNTSVEEFVENLRNAIKRLRSN--------------GARLIIVANIVVI 138 (234)
T ss_dssp HHHTTSEEEE-E-SHHHHSSCC---S--CSTTHHHHHHHHHHHHHHHHHHHHT--------------TTEEEEEEEEEEE
T ss_pred ccCCcceEEE-ecccCcchhhc---c--cchhhhhHhhHhhhhhhhhhHHhcc--------------CCccccccccccc
Confidence 3457799999 99999987411 1 1233566788999999999999999 999 99999
Q ss_pred cCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcC-CcEEEEEechHHHHHH--HHhhh--
Q 035619 93 ILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLH-DAVFIHVDIYSAKYTL--ITQAK-- 167 (188)
Q Consensus 93 nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~-~a~i~~~D~y~~~~~i--i~nP~-- 167 (188)
++||++|.|....... +..+|.+.+++.+..||.+|++.+++|++.++ +.++.++|+++.+.+. +.+|.
T Consensus 139 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~~ 212 (234)
T PF00657_consen 139 NLPPIGCLPAWSSNNK------DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEND 212 (234)
T ss_dssp HHC-GGGSTTHHHTHT------TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGHH
T ss_pred cccccccccccccccc------cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHhhhccCcccc
Confidence 9999999988766432 24579999999999999999999999988886 8999999999999999 78886
Q ss_pred hcCCC
Q 035619 168 KYGLF 172 (188)
Q Consensus 168 ~yGf~ 172 (188)
+|-|-
T Consensus 213 ~~~~~ 217 (234)
T PF00657_consen 213 KYMFW 217 (234)
T ss_dssp HCBBS
T ss_pred eeccC
Confidence 45443
No 8
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.96 E-value=0.0089 Score=47.11 Aligned_cols=97 Identities=13% Similarity=0.011 Sum_probs=59.6
Q ss_pred CCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCC
Q 035619 20 FSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGC 99 (188)
Q Consensus 20 ~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc 99 (188)
..-.+.+| .+|+||+... .+ ..+...++.+.++++.+.. +..++++.++||++.
T Consensus 66 ~~pd~Vii-~~G~ND~~~~---~~---------~~~~~~~l~~li~~i~~~~-------------~~~~iiv~~~p~~~~ 119 (191)
T cd01836 66 TRFDVAVI-SIGVNDVTHL---TS---------IARWRKQLAELVDALRAKF-------------PGARVVVTAVPPLGR 119 (191)
T ss_pred CCCCEEEE-EecccCcCCC---CC---------HHHHHHHHHHHHHHHHhhC-------------CCCEEEEECCCCccc
Confidence 35578999 9999998631 11 2234555666666665520 556889999999987
Q ss_pred cchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHH
Q 035619 100 LPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKY 160 (188)
Q Consensus 100 ~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~ 160 (188)
.|.... ......++..+.+|..+++..++ ++ .+.++|.+..+.
T Consensus 120 ~~~~~~------------~~~~~~~~~~~~~n~~~~~~a~~----~~--~~~~id~~~~~~ 162 (191)
T cd01836 120 FPALPQ------------PLRWLLGRRARLLNRALERLASE----AP--RVTLLPATGPLF 162 (191)
T ss_pred CCCCcH------------HHHHHHHHHHHHHHHHHHHHHhc----CC--CeEEEecCCccc
Confidence 653211 12234455666777766655443 33 456778887764
No 9
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.65 E-value=0.025 Score=42.12 Aligned_cols=97 Identities=12% Similarity=-0.072 Sum_probs=61.0
Q ss_pred CCCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHH-hhhhhhcccccccCCCccEEEEecCCCC
Q 035619 19 DFSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLY-KFHFILSCHRNFTKKEQEYFGSIILLPI 97 (188)
Q Consensus 19 ~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~-~~~~~~~~~~~~~~~GAR~f~v~nlppl 97 (188)
..+..++++ .+|+||+.... ... .......+...++.+.+ . ...++++++.||.
T Consensus 63 ~~~~d~vil-~~G~ND~~~~~-~~~---------~~~~~~~~~~~i~~~~~~~--------------~~~~vv~~~~~~~ 117 (187)
T cd00229 63 KDKPDLVII-ELGTNDLGRGG-DTS---------IDEFKANLEELLDALRERA--------------PGAKVILITPPPP 117 (187)
T ss_pred cCCCCEEEE-Eeccccccccc-ccC---------HHHHHHHHHHHHHHHHHHC--------------CCCcEEEEeCCCC
Confidence 446688999 99999996421 011 11233444445555544 4 7788999999988
Q ss_pred CCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHH
Q 035619 98 GCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTL 162 (188)
Q Consensus 98 Gc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~i 162 (188)
+..|. ..+.....+|..+++..++.... ..+.++|++..+.+.
T Consensus 118 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 160 (187)
T cd00229 118 PPREG-------------------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE 160 (187)
T ss_pred CCCch-------------------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC
Confidence 87664 12234556777776665554332 567889999887654
No 10
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.63 E-value=0.03 Score=43.50 Aligned_cols=101 Identities=9% Similarity=0.012 Sum_probs=61.3
Q ss_pred CCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHH-HhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 22 KALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLL-YKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 22 ~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~-~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
-.++++ ++|+||....+.. . .. ......++...|+.+. .. ...++++++.+|....
T Consensus 62 ~d~v~l-~~G~ND~~~~~~~-~---~~----~~~~~~~l~~~v~~~~~~~--------------~~~~ii~~~p~~~~~~ 118 (191)
T cd01834 62 PDVVSI-MFGINDSFRGFDD-P---VG----LEKFKTNLRRLIDRLKNKE--------------SAPRIVLVSPIAYEAN 118 (191)
T ss_pred CCEEEE-EeecchHhhcccc-c---cc----HHHHHHHHHHHHHHHHccc--------------CCCcEEEECCcccCCC
Confidence 379999 9999999753210 1 11 2234556666666664 23 4456777765554332
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHh
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQ 165 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~n 165 (188)
+... .-....+.....||..+++..++ ..+.++|.|+.+.+....
T Consensus 119 ~~~~-------------~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~ 163 (191)
T cd01834 119 EDPL-------------PDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQK 163 (191)
T ss_pred CCCC-------------CChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHh
Confidence 1100 01245677788888888765443 237789999999887655
No 11
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.54 E-value=0.0099 Score=47.72 Aligned_cols=101 Identities=11% Similarity=-0.096 Sum_probs=54.3
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.-.+++| ++|+||+...+ ..+ .+ ....++.+.++.+-+. +.. ...+..+++++..||+-..
T Consensus 79 ~pd~vii-~lGtND~~~~~-~~~--~~-------~~~~~l~~lv~~i~~~------~~~--~~~~~~~iil~~pp~~~~~ 139 (208)
T cd01839 79 PLDLVII-MLGTNDLKSYF-NLS--AA-------EIAQGLGALVDIIRTA------PIE--PGMPAPKILIVAPPPIRTP 139 (208)
T ss_pred CCCEEEE-ecccccccccc-CCC--HH-------HHHHHHHHHHHHHHhc------ccc--ccCCCCCEEEEeCCccCcc
Confidence 4478999 99999986422 111 12 2233333444444333 000 0014677888888887211
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAK 159 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~ 159 (188)
+.. ...+....|...+.||+.+++..++. .+.++|.++++
T Consensus 140 ~~~------------~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~ 179 (208)
T cd01839 140 KGS------------LAGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVG 179 (208)
T ss_pred ccc------------hhhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHh
Confidence 110 01123345677778888887665542 35678987765
No 12
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.39 E-value=0.045 Score=41.67 Aligned_cols=93 Identities=17% Similarity=0.095 Sum_probs=59.7
Q ss_pred CCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCC
Q 035619 20 FSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGC 99 (188)
Q Consensus 20 ~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc 99 (188)
..-.+.++ .+|+||..... . .+....+++..|+++... .+++ ++++.+++|..-
T Consensus 39 ~~pd~vvi-~~G~ND~~~~~---~---------~~~~~~~~~~~i~~i~~~------------~p~~-~ii~~~~~p~~~ 92 (157)
T cd01833 39 AKPDVVLL-HLGTNDLVLNR---D---------PDTAPDRLRALIDQMRAA------------NPDV-KIIVATLIPTTD 92 (157)
T ss_pred CCCCEEEE-eccCcccccCC---C---------HHHHHHHHHHHHHHHHHh------------CCCe-EEEEEeCCCCCC
Confidence 35588999 99999986431 1 123445555666666554 1133 355555555321
Q ss_pred cchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 100 LPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 100 ~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
.+ .+.....||..+++.+++.+.. +..+.++|+++.+.+
T Consensus 93 ~~---------------------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~ 131 (157)
T cd01833 93 AS---------------------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT 131 (157)
T ss_pred cc---------------------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC
Confidence 10 1566789999999998886543 678899999998754
No 13
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.23 E-value=0.054 Score=42.84 Aligned_cols=97 Identities=8% Similarity=-0.072 Sum_probs=54.8
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.-.+.++ .+|+||.................+......++...++.+-+. |++ +++++.||++-.
T Consensus 59 ~pd~vii-~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~--------------~~~-vili~~pp~~~~ 122 (200)
T cd01829 59 KPDVVVV-FLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARAK--------------GVP-VIWVGLPAMRSP 122 (200)
T ss_pred CCCEEEE-EecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHhC--------------CCc-EEEEcCCCCCCh
Confidence 3467888 999999864222111000011233444556666666666555 765 777777776410
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
..++....+|..+++..++ . .+.++|++..+.+
T Consensus 123 ---------------------~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~ 155 (200)
T cd01829 123 ---------------------KLSADMVYLNSLYREEVAK----A---GGEFVDVWDGFVD 155 (200)
T ss_pred ---------------------hHhHHHHHHHHHHHHHHHH----c---CCEEEEhhHhhcC
Confidence 1234455677766654432 2 2678999887743
No 14
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=96.22 E-value=0.039 Score=42.73 Aligned_cols=92 Identities=12% Similarity=0.066 Sum_probs=56.7
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.-.+.+| ++|+||..... + .+....+++..++++.+.. ...+++++++||..-.
T Consensus 51 ~pd~v~i-~~G~ND~~~~~---~---------~~~~~~~~~~l~~~~~~~~-------------p~~~vi~~~~~p~~~~ 104 (174)
T cd01841 51 NPSKVFL-FLGTNDIGKEV---S---------SNQFIKWYRDIIEQIREEF-------------PNTKIYLLSVLPVLEE 104 (174)
T ss_pred CCCEEEE-EeccccCCCCC---C---------HHHHHHHHHHHHHHHHHHC-------------CCCEEEEEeeCCcCcc
Confidence 3467888 99999985321 1 2234555666666665540 4567888888877432
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
+. +....+.-...||..+++..++. .+.++|+++.+.+
T Consensus 105 ~~----------------~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~ 142 (174)
T cd01841 105 DE----------------IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVD 142 (174)
T ss_pred cc----------------cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcC
Confidence 21 01123455678888887654432 2678999998754
No 15
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=96.20 E-value=0.06 Score=44.54 Aligned_cols=117 Identities=11% Similarity=-0.079 Sum_probs=63.2
Q ss_pred CCeEEEeeccccchhhhcc-----CC----------cchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCc
Q 035619 22 KALHTRLWTEGNLTPTGYL-----NK----------KVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQ 86 (188)
Q Consensus 22 ~sL~~i~~iG~ND~~~~~~-----~~----------~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GA 86 (188)
-.+.+| ++|+||+.+... .. ...........+...+++...|++|.+. . +-
T Consensus 81 ~dlV~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~------------~-p~ 146 (259)
T cd01823 81 TDLVTI-TIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRER------------A-PN 146 (259)
T ss_pred CCEEEE-EECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhh------------C-CC
Confidence 478899 999999865311 00 0000111223444555666666666543 1 34
Q ss_pred cEEEEecCCCCCC----cchhh-hhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 87 EYFGSIILLPIGC----LPFMV-VEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 87 R~f~v~nlpplGc----~P~~~-~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
-++++++.|++-- .|... ..... -.....+..++....+|..+++..++ +...++.++|++..+..
T Consensus 147 a~I~~~gyp~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ln~~i~~~a~~----~~~~~v~fvD~~~~f~~ 217 (259)
T cd01823 147 ARVVVVGYPRLFPPDGGDCDKSCSPGTP-----LTPADRPELNQLVDKLNALIRRAAAD----AGDYKVRFVDTDAPFAG 217 (259)
T ss_pred cEEEEecccccccCCCCCcccccccCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHH----hCCceEEEEECCCCcCC
Confidence 4688888776521 00000 00000 01124456777788888777765544 33367889999988763
No 16
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=96.16 E-value=0.11 Score=41.39 Aligned_cols=104 Identities=14% Similarity=0.050 Sum_probs=59.9
Q ss_pred CCCeEEEeeccccchhhhccCCc--chhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCc-cEEEEecCC-C
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKK--VAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQ-EYFGSIILL-P 96 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~--~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GA-R~f~v~nlp-p 96 (188)
.-.+.+| .+|+||+........ ........-......++.+.|+++-+. +. .++++++++ |
T Consensus 68 ~~d~V~i-~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~--------------~p~~~Ivv~~~~~p 132 (204)
T cd04506 68 KADVITI-TIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKL--------------NPDAPIFLVGLYNP 132 (204)
T ss_pred cCCEEEE-EecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHH--------------CCCCeEEEEecCCc
Confidence 4578899 999999976432100 001222223445666777777777665 43 356666653 3
Q ss_pred CCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 97 IGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 97 lGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
... .. . -....++.+..||..+++..++ + ..+.++|.++.+.+
T Consensus 133 ~~~-----~~-~----------~~~~~~~~~~~~n~~~~~~a~~----~--~~v~~vd~~~~~~~ 175 (204)
T cd04506 133 FYV-----YF-P----------NITEINDIVNDWNEASQKLASQ----Y--KNAYFVPIFDLFSD 175 (204)
T ss_pred ccc-----cc-c----------hHHHHHHHHHHHHHHHHHHHHh----C--CCeEEEehHHhhcC
Confidence 211 00 0 0124577888889877766432 1 24778999987764
No 17
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=96.03 E-value=0.12 Score=38.73 Aligned_cols=95 Identities=14% Similarity=0.038 Sum_probs=59.1
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.-.+++| .+|+||.... .. .....+....+++..|+.+... + +++++.++|.+-.
T Consensus 61 ~~d~vvi-~~G~ND~~~~--~~------~~~~~~~~~~~l~~~i~~~~~~--------------~--~vi~~~~~~~~~~ 115 (179)
T PF13472_consen 61 KPDLVVI-SFGTNDVLNG--DE------NDTSPEQYEQNLRRIIEQLRPH--------------G--PVILVSPPPRGPD 115 (179)
T ss_dssp TCSEEEE-E--HHHHCTC--TT------CHHHHHHHHHHHHHHHHHHHTT--------------S--EEEEEE-SCSSSS
T ss_pred CCCEEEE-Eccccccccc--cc------ccccHHHHHHHHHHHHHhhccc--------------C--cEEEecCCCcccc
Confidence 4468999 9999999752 11 1234556677788888888777 7 8899988877644
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
+.... ..........+|+.+++..+ ++ .+.++|++..+.+
T Consensus 116 ~~~~~--------------~~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~~ 155 (179)
T PF13472_consen 116 PRDPK--------------QDYLNRRIDRYNQAIRELAK----KY---GVPFIDLFDAFDD 155 (179)
T ss_dssp TTTTH--------------TTCHHHHHHHHHHHHHHHHH----HC---TEEEEEHHHHHBT
T ss_pred ccccc--------------chhhhhhHHHHHHHHHHHHH----Hc---CCEEEECHHHHcc
Confidence 32211 12234556667777765443 33 6778999998664
No 18
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=95.99 E-value=0.086 Score=41.17 Aligned_cols=106 Identities=10% Similarity=-0.030 Sum_probs=56.3
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
+-.+.+| ++|+||....... . ... .....++++..|+++-+. .+|+ ++++++.+|.+-.
T Consensus 63 ~pd~vii-~~G~ND~~~~~~~-~--~~~----~~~~~~~~~~~i~~~~~~------------~~~~-~ii~~t~~~~~~~ 121 (199)
T cd01838 63 QPDLVTI-FFGANDAALPGQP-Q--HVP----LDEYKENLRKIVSHLKSL------------SPKT-KVILITPPPVDEE 121 (199)
T ss_pred CceEEEE-EecCccccCCCCC-C--ccc----HHHHHHHHHHHHHHHHhh------------CCCC-eEEEeCCCCCCHH
Confidence 5679999 9999998642110 0 011 123334445555555441 0155 5777788776533
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
........ ...-....|+....||..+++..++ + .+.++|.++.+.+
T Consensus 122 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~---~~~~iD~~~~~~~ 168 (199)
T cd01838 122 AWEKSLED-------GGSQPGRTNELLKQYAEACVEVAEE----L---GVPVIDLWTAMQE 168 (199)
T ss_pred HHhhhhcc-------ccCCccccHHHHHHHHHHHHHHHHH----h---CCcEEEHHHHHHh
Confidence 21110000 0011233466677788777654443 2 2668899988765
No 19
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=95.80 E-value=0.084 Score=42.73 Aligned_cols=89 Identities=13% Similarity=0.031 Sum_probs=53.2
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.-.+++| ++|+||+.... + .+++..++...|+++... . ...++++++++|.+-.
T Consensus 89 ~pd~VvI-~~G~ND~~~~~---~---------~~~~~~~l~~ii~~l~~~------------~-P~~~Iil~~~~p~~~~ 142 (214)
T cd01820 89 NPKVVVL-LIGTNNIGHTT---T---------AEEIAEGILAIVEEIREK------------L-PNAKILLLGLLPRGQN 142 (214)
T ss_pred CCCEEEE-EecccccCCCC---C---------HHHHHHHHHHHHHHHHHH------------C-CCCeEEEEeccCCCCC
Confidence 4578899 99999985321 1 223455666666666655 1 2346888888776532
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKY 160 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~ 160 (188)
|. ...+....+|..+++... + ...+.++|++..+.
T Consensus 143 ~~-------------------~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~ 177 (214)
T cd01820 143 PN-------------------PLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFV 177 (214)
T ss_pred ch-------------------hHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhc
Confidence 11 122344566766654432 2 23578889998874
No 20
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=95.32 E-value=0.16 Score=39.49 Aligned_cols=89 Identities=13% Similarity=0.095 Sum_probs=53.8
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCC-CC
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPI-GC 99 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlppl-Gc 99 (188)
.-.+.+| ++|.||.... .. . ..+...++...|+++... ++ +++++++||. +.
T Consensus 67 ~~d~vii-~~G~ND~~~~--~~-----~----~~~~~~~~~~~i~~i~~~--------------~~-~vil~~~~~~~~~ 119 (185)
T cd01832 67 RPDLVTL-LAGGNDILRP--GT-----D----PDTYRADLEEAVRRLRAA--------------GA-RVVVFTIPDPAVL 119 (185)
T ss_pred CCCEEEE-eccccccccC--CC-----C----HHHHHHHHHHHHHHHHhC--------------CC-EEEEecCCCcccc
Confidence 4468999 9999998541 11 1 123444555566666555 77 4777888887 32
Q ss_pred cchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHH
Q 035619 100 LPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKY 160 (188)
Q Consensus 100 ~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~ 160 (188)
.|.. ...+.....+|+.|++..++ ..+.++|++..+.
T Consensus 120 ~~~~-----------------~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~ 156 (185)
T cd01832 120 EPFR-----------------RRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE 156 (185)
T ss_pred chhH-----------------HHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc
Confidence 2211 12344577778777766543 2467888887653
No 21
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=94.98 E-value=0.17 Score=43.58 Aligned_cols=108 Identities=14% Similarity=0.105 Sum_probs=60.1
Q ss_pred CeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCcc-EEEEecCCCCCCcc
Q 035619 23 ALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQE-YFGSIILLPIGCLP 101 (188)
Q Consensus 23 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR-~f~v~nlpplGc~P 101 (188)
.|.+| +||+||... +...+. . ........++.+.++.|.+. .-| .++++++|++.-++
T Consensus 121 klVtI-~IG~ND~c~-~~~~~~-~----~~~~~~~~nL~~~L~~Lr~~--------------~P~~~V~lv~~~~~~~l~ 179 (288)
T cd01824 121 KLITI-FIGGNDLCS-LCEDAN-P----GSPQTFVKNLRKALDILRDE--------------VPRAFVNLVGLLNVASLR 179 (288)
T ss_pred cEEEE-EecchhHhh-hccccc-C----cCHHHHHHHHHHHHHHHHHh--------------CCCcEEEEEcCCCcHHHH
Confidence 47899 999999975 212110 1 22345556777777777777 544 35666777665444
Q ss_pred hhhhhcCCCCCCCCccchh----------HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEE
Q 035619 102 FMVVEYLPKPRNEDQNGCI----------KTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIH 152 (188)
Q Consensus 102 ~~~~~~~~~~~~~d~~gC~----------~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~ 152 (188)
..... +..-.......|. +...++.+.|++.+++..++-+-...+-.+++
T Consensus 180 ~~~~~-p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~eia~~~~~~~~~f~vv~ 239 (288)
T cd01824 180 SLTKK-PLQCETLLAPECPCLLGPTENSYQDLKKFYKEYQNEVEEIVESGEFDREDFAVVV 239 (288)
T ss_pred HhccC-CccccccCCCcCCCcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccCccEEe
Confidence 33210 0000000112232 46778889999988877765333334555555
No 22
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.92 E-value=0.12 Score=41.39 Aligned_cols=56 Identities=7% Similarity=-0.130 Sum_probs=35.3
Q ss_pred CeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCC
Q 035619 23 ALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIG 98 (188)
Q Consensus 23 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplG 98 (188)
.+.+| .+|.||......... .....++....+++..++++... |+ ++++.+++|..
T Consensus 76 ~~vii-~~G~ND~~~~~~~~~----~~~~~~~~~~~~l~~ii~~~~~~--------------~~-~vil~t~~P~~ 131 (204)
T cd01830 76 RTVII-LEGVNDIGASGTDFA----AAPVTAEELIAGYRQLIRRAHAR--------------GI-KVIGATITPFE 131 (204)
T ss_pred CEEEE-ecccccccccccccc----cCCCCHHHHHHHHHHHHHHHHHC--------------CC-eEEEecCCCCC
Confidence 57888 999999864322111 00112335566777777777777 87 57778887753
No 23
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.87 E-value=0.2 Score=38.54 Aligned_cols=89 Identities=15% Similarity=0.084 Sum_probs=52.8
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.-.+.++ .+|+||.... .. .+....++...|+.+.+. .+++ ++++.++||.+
T Consensus 48 ~pd~vvl-~~G~ND~~~~---~~---------~~~~~~~l~~li~~~~~~------------~~~~-~vi~~~~~p~~-- 99 (169)
T cd01828 48 QPKAIFI-MIGINDLAQG---TS---------DEDIVANYRTILEKLRKH------------FPNI-KIVVQSILPVG-- 99 (169)
T ss_pred CCCEEEE-EeeccCCCCC---CC---------HHHHHHHHHHHHHHHHHH------------CCCC-eEEEEecCCcC--
Confidence 4478899 9999998532 11 123444555555666552 0154 58888888866
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
+. . ...+.-...+|..+++..++ ..+.++|.++.+.+
T Consensus 100 ~~-----~------------~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~ 136 (169)
T cd01828 100 EL-----K------------SIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFTN 136 (169)
T ss_pred cc-----C------------cCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhcC
Confidence 10 0 01234567788888765542 24467798887643
No 24
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=94.65 E-value=0.34 Score=37.74 Aligned_cols=93 Identities=13% Similarity=0.034 Sum_probs=55.4
Q ss_pred CCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcc
Q 035619 22 KALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLP 101 (188)
Q Consensus 22 ~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P 101 (188)
-.+.++ .+|.||.... .+ ..+...+++..|+.+.+. |++ ++++..+|..-.+
T Consensus 60 ~d~v~i-~~G~ND~~~~---~~---------~~~~~~~~~~li~~~~~~--------------~~~-~il~~~~p~~~~~ 111 (183)
T cd04501 60 PAVVII-MGGTNDIIVN---TS---------LEMIKDNIRSMVELAEAN--------------GIK-VILASPLPVDDYP 111 (183)
T ss_pred CCEEEE-EeccCccccC---CC---------HHHHHHHHHHHHHHHHHC--------------CCc-EEEEeCCCcCccc
Confidence 368888 9999998642 11 123345566666666666 875 5555666654332
Q ss_pred hhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHHH
Q 035619 102 FMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLI 163 (188)
Q Consensus 102 ~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii 163 (188)
... +....+.....||..+++..++ ..+.++|.++.+.+.-
T Consensus 112 ~~~--------------~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~ 152 (183)
T cd04501 112 WKP--------------QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDER 152 (183)
T ss_pred cch--------------hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhccc
Confidence 210 1122345566788777665443 2477899999877643
No 25
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=92.98 E-value=1.1 Score=35.41 Aligned_cols=97 Identities=9% Similarity=-0.001 Sum_probs=54.9
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.-.+++| .+|+||......... .. .+....++.+.|+++-+. |++ +++++.+|...
T Consensus 65 ~pdlVii-~~G~ND~~~~~~~~~---~~----~~~~~~nl~~ii~~~~~~--------------~~~-~il~tp~~~~~- 120 (198)
T cd01821 65 PGDYVLI-QFGHNDQKPKDPEYT---EP----YTTYKEYLRRYIAEARAK--------------GAT-PILVTPVTRRT- 120 (198)
T ss_pred CCCEEEE-ECCCCCCCCCCCCCC---Cc----HHHHHHHHHHHHHHHHHC--------------CCe-EEEECCccccc-
Confidence 3488999 999999854211000 11 234456666677777777 886 44455444211
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLIT 164 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~ 164 (188)
.. ... ..+.....||..+++..++. .+.++|.+..+.+..+
T Consensus 121 ------~~-------~~~---~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~ 161 (198)
T cd01821 121 ------FD-------EGG---KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYE 161 (198)
T ss_pred ------cC-------CCC---cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHH
Confidence 11 000 12233456777776654432 3567999999887655
No 26
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=92.62 E-value=2 Score=33.06 Aligned_cols=88 Identities=15% Similarity=0.153 Sum_probs=50.6
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCc-cEEEEecCCCCCC
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQ-EYFGSIILLPIGC 99 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GA-R~f~v~nlpplGc 99 (188)
.-.+.++ .+|+||+... .+ .+....++.+.++++.+. +. .+++++.++|.
T Consensus 50 ~p~~vvi-~~G~ND~~~~---~~---------~~~~~~~~~~lv~~i~~~--------------~~~~~iil~~~~p~-- 100 (171)
T cd04502 50 QPRRVVL-YAGDNDLASG---RT---------PEEVLRDFRELVNRIRAK--------------LPDTPIAIISIKPS-- 100 (171)
T ss_pred CCCEEEE-EEecCcccCC---CC---------HHHHHHHHHHHHHHHHHH--------------CCCCcEEEEEecCC--
Confidence 4468999 9999997431 11 233456666667777665 42 34666665442
Q ss_pred cchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 100 LPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 100 ~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
|. . ...+.....+|..+++..+ +. -.+.++|.++.+.+
T Consensus 101 -~~--~---------------~~~~~~~~~~n~~~~~~a~----~~--~~v~~vD~~~~~~~ 138 (171)
T cd04502 101 -PA--R---------------WALRPKIRRFNALLKELAE----TR--PNLTYIDVASPMLD 138 (171)
T ss_pred -Cc--c---------------hhhHHHHHHHHHHHHHHHh----cC--CCeEEEECcHHHhC
Confidence 10 0 0122335567766665543 22 24678999988764
No 27
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=91.65 E-value=1.4 Score=34.61 Aligned_cols=31 Identities=10% Similarity=0.097 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 124 NVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 124 n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
+.....+|..+++..++ + .+.++|+|..+.+
T Consensus 131 ~~~~~~~n~~~~~~a~~----~---~~~~vd~~~~~~~ 161 (193)
T cd01835 131 NRRIARLETAFAEVCLR----R---DVPFLDTFTPLLN 161 (193)
T ss_pred hHHHHHHHHHHHHHHHH----c---CCCeEeCccchhc
Confidence 45566777777665443 2 3568899887765
No 28
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=91.29 E-value=2.6 Score=36.88 Aligned_cols=56 Identities=18% Similarity=0.012 Sum_probs=34.9
Q ss_pred CCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCcc--EEEEecCCCC
Q 035619 22 KALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQE--YFGSIILLPI 97 (188)
Q Consensus 22 ~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR--~f~v~nlppl 97 (188)
-++++| ++|+||..... .... . ...+.+.-.++.+.++.|-+. .-+ +++++++|++
T Consensus 123 P~lVtI-~lGgND~C~g~-~d~~-~---~tp~eefr~NL~~~L~~Lr~~--------------lP~~s~ViLvgmpd~ 180 (305)
T cd01826 123 PALVIY-SMIGNDVCNGP-NDTI-N---HTTPEEFYENVMEALKYLDTK--------------LPNGSHVILVGLVDG 180 (305)
T ss_pred CeEEEE-EeccchhhcCC-Cccc-c---CcCHHHHHHHHHHHHHHHHhc--------------CCCCCEEEEEeccch
Confidence 488899 99999997642 1110 0 112333445666677777666 544 8888888873
No 29
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=91.26 E-value=2.4 Score=32.95 Aligned_cols=91 Identities=14% Similarity=-0.028 Sum_probs=51.5
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCc-cEEEEecCCCCCC
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQ-EYFGSIILLPIGC 99 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GA-R~f~v~nlpplGc 99 (188)
.-.+++| .+|+||... . . +..+++...+++|.+. .- .++++++.+|.
T Consensus 57 ~pd~vii-~~G~ND~~~-----~--~--------~~~~~~~~~i~~i~~~--------------~p~~~iil~~~~~~-- 104 (177)
T cd01844 57 PADLYII-DCGPNIVGA-----E--A--------MVRERLGPLVKGLRET--------------HPDTPILLVSPRYC-- 104 (177)
T ss_pred CCCEEEE-EeccCCCcc-----H--H--------HHHHHHHHHHHHHHHH--------------CcCCCEEEEecCCC--
Confidence 4478889 999999632 1 0 4566777778888776 43 45677776664
Q ss_pred cchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHH
Q 035619 100 LPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAK 159 (188)
Q Consensus 100 ~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~ 159 (188)
|..... .+.....++....+|..+ +.+.++ .+.++.++|.++++
T Consensus 105 -~~~~~~----------~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~v~~id~~~~~ 148 (177)
T cd01844 105 -PDAELT----------PGRGKLTLAVRRALREAF----EKLRAD-GVPNLYYLDGEELL 148 (177)
T ss_pred -CccccC----------cchhHHHHHHHHHHHHHH----HHHHhc-CCCCEEEecchhhc
Confidence 221110 011223444444444444 444332 24478889987655
No 30
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=90.63 E-value=2.4 Score=32.92 Aligned_cols=52 Identities=8% Similarity=-0.172 Sum_probs=31.1
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCC-ccEEEEecCCCC
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKE-QEYFGSIILLPI 97 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~G-AR~f~v~nlppl 97 (188)
.-.+.+| .+|+||..... .. .. +....++...|+++.+. + ..++++.+.+|.
T Consensus 67 ~pd~Vii-~~G~ND~~~~~--~~----~~----~~~~~~l~~li~~i~~~--------------~~~~~iil~t~~p~ 119 (188)
T cd01827 67 NPNIVII-KLGTNDAKPQN--WK----YK----DDFKKDYETMIDSFQAL--------------PSKPKIYICYPIPA 119 (188)
T ss_pred CCCEEEE-EcccCCCCCCC--Cc----cH----HHHHHHHHHHHHHHHHH--------------CCCCeEEEEeCCcc
Confidence 4478999 99999986321 11 11 22344566666666555 4 346777776664
No 31
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=89.24 E-value=2.1 Score=33.13 Aligned_cols=93 Identities=10% Similarity=-0.175 Sum_probs=49.7
Q ss_pred CCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcc
Q 035619 22 KALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLP 101 (188)
Q Consensus 22 ~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P 101 (188)
-.+++| .+|+||..... .. .+....+++..|+++.+.. +..++++++.+|..-.+
T Consensus 57 pd~Vii-~~G~ND~~~~~--~~---------~~~~~~~~~~li~~i~~~~-------------~~~~iv~~~~~~~~~~~ 111 (189)
T cd01825 57 PDLVIL-SYGTNEAFNKQ--LN---------ASEYRQQLREFIKRLRQIL-------------PNASILLVGPPDSLQKT 111 (189)
T ss_pred CCEEEE-ECCCcccccCC--CC---------HHHHHHHHHHHHHHHHHHC-------------CCCeEEEEcCCchhccC
Confidence 368889 99999964311 11 2234455666666665530 45567777776653222
Q ss_pred hhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHH
Q 035619 102 FMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYT 161 (188)
Q Consensus 102 ~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ 161 (188)
.. +....+.....+|..+++. .+++ + +.++|.++.+.+
T Consensus 112 ~~---------------~~~~~~~~~~~~~~~~~~~----a~~~-~--v~~vd~~~~~~~ 149 (189)
T cd01825 112 GA---------------GRWRTPPGLDAVIAAQRRV----AKEE-G--IAFWDLYAAMGG 149 (189)
T ss_pred CC---------------CCcccCCcHHHHHHHHHHH----HHHc-C--CeEEeHHHHhCC
Confidence 10 0001122234555555444 3333 2 678999988754
No 32
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=87.53 E-value=3.5 Score=32.71 Aligned_cols=45 Identities=18% Similarity=-0.003 Sum_probs=30.2
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEe
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSI 92 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~ 92 (188)
+..+.+| .+|+||.... .+ .....++++..++.+.+. |++.+++.
T Consensus 71 ~pd~Vii-~~GtND~~~~---~~---------~~~~~~~l~~li~~~~~~--------------~~~~ill~ 115 (191)
T PRK10528 71 QPRWVLV-ELGGNDGLRG---FP---------PQQTEQTLRQIIQDVKAA--------------NAQPLLMQ 115 (191)
T ss_pred CCCEEEE-EeccCcCccC---CC---------HHHHHHHHHHHHHHHHHc--------------CCCEEEEE
Confidence 3478899 9999997431 11 224456666777777777 88877663
No 33
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=87.16 E-value=5.5 Score=33.50 Aligned_cols=117 Identities=12% Similarity=0.040 Sum_probs=62.9
Q ss_pred CCCCCCCCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecC
Q 035619 15 PRPEDFSKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIIL 94 (188)
Q Consensus 15 ~~~~~~~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nl 94 (188)
|..+...-++.+| +.|+||-...=-+....--...+|+ +++++.++-|-+. +--.++++++-
T Consensus 62 p~~~s~~p~lvtV-ffGaNDs~l~~~~~~~~hvPl~Ey~----dNlr~iv~~lks~-------------~~~~riIlitP 123 (245)
T KOG3035|consen 62 PKGSSIQPVLVTV-FFGANDSCLPEPSSLGQHVPLEEYK----DNLRKIVSHLKSL-------------SPETRIILITP 123 (245)
T ss_pred cccccCCceEEEE-EecCccccCCCCCCCCCccCHHHHH----HHHHHHHHHhhcc-------------CCcceEEEecC
Confidence 3445556789999 9999997532111100011234444 3333333333222 12356777777
Q ss_pred CCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHH
Q 035619 95 LPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTL 162 (188)
Q Consensus 95 pplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~i 162 (188)
||+.-.-.......+ -..-.++.|+.+..|+..+.+..++++ +-.+|.++.+.+.
T Consensus 124 pp~de~~~~~~~~e~------~~~~~~RtNe~~~~Ya~ac~~la~e~~-------l~~vdlws~~Q~~ 178 (245)
T KOG3035|consen 124 PPVDEEAWEKQEQEP------YVLGPERTNETVGTYAKACANLAQEIG-------LYVVDLWSKMQES 178 (245)
T ss_pred CCcCHHHHHHHhccc------hhccchhhhhHHHHHHHHHHHHHHHhC-------CeeeeHHhhhhhc
Confidence 777654333322110 011234589999999998887766653 3356766666553
No 34
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=81.54 E-value=12 Score=30.93 Aligned_cols=61 Identities=13% Similarity=0.109 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHH
Q 035619 57 VSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKD 136 (188)
Q Consensus 57 v~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~ 136 (188)
..-+.+.++.|... |.|+++++|= ++ | | ...|+.
T Consensus 85 ~~~l~di~~sl~~~--------------Gf~~ivivng------------Hg---------G-----N------~~~l~~ 118 (237)
T PF02633_consen 85 IALLRDILRSLARH--------------GFRRIVIVNG------------HG---------G-----N------IAALEA 118 (237)
T ss_dssp HHHHHHHHHHHHHH--------------T--EEEEEES------------ST---------T-----H------HHHHHH
T ss_pred HHHHHHHHHHHHHc--------------CCCEEEEEEC------------CH---------h-----H------HHHHHH
Confidence 34455567778888 9999999982 21 1 1 124677
Q ss_pred HHHHHHhhcCCcEEEEEechHHHHHHH
Q 035619 137 SVSDQRTQLHDAVFIHVDIYSAKYTLI 163 (188)
Q Consensus 137 ~l~~L~~~~~~a~i~~~D~y~~~~~ii 163 (188)
.+++|+.++++.++...|.+....+..
T Consensus 119 ~~~~l~~~~~~~~v~~~~~~~~~~~~~ 145 (237)
T PF02633_consen 119 AARELRQEYPGVKVFVINWWQLAEDEG 145 (237)
T ss_dssp HHHHHHHHGCC-EEEEEEGGGCSHCHH
T ss_pred HHHHHHhhCCCcEEEEeechhccchhh
Confidence 788888888999999999998865543
No 35
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=80.60 E-value=8 Score=29.36 Aligned_cols=13 Identities=8% Similarity=-0.281 Sum_probs=10.9
Q ss_pred CCeEEEeeccccch
Q 035619 22 KALHTRLWTEGNLT 35 (188)
Q Consensus 22 ~sL~~i~~iG~ND~ 35 (188)
..+.+| ++|+||.
T Consensus 51 ~d~vvi-~lGtNd~ 63 (150)
T cd01840 51 RKTVVI-GLGTNGP 63 (150)
T ss_pred CCeEEE-EecCCCC
Confidence 367788 9999997
No 36
>PLN02757 sirohydrochlorine ferrochelatase
Probab=80.36 E-value=9.5 Score=29.90 Aligned_cols=67 Identities=6% Similarity=0.059 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHH
Q 035619 60 LLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVS 139 (188)
Q Consensus 60 ~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~ 139 (188)
+.++|+++... |+|+++| +|.++..... ...-+.+.++
T Consensus 60 l~eal~~l~~~--------------g~~~vvV--------vP~FL~~G~H--------------------~~~DIp~~v~ 97 (154)
T PLN02757 60 IKDAFGRCVEQ--------------GASRVIV--------SPFFLSPGRH--------------------WQEDIPALTA 97 (154)
T ss_pred HHHHHHHHHHC--------------CCCEEEE--------EEhhhcCCcc--------------------hHhHHHHHHH
Confidence 56677788888 9999987 6777654221 1234677888
Q ss_pred HHHhhcCCcEEEEEec---hHHHHHHHHhhhh
Q 035619 140 DQRTQLHDAVFIHVDI---YSAKYTLITQAKK 168 (188)
Q Consensus 140 ~L~~~~~~a~i~~~D~---y~~~~~ii~nP~~ 168 (188)
+++.++|+.+|++... ...+.+++.+=..
T Consensus 98 ~~~~~~p~~~i~~~~pLG~~p~l~~ll~~Ri~ 129 (154)
T PLN02757 98 EAAKEHPGVKYLVTAPIGLHELMVDVVNDRIK 129 (154)
T ss_pred HHHHHCCCcEEEECCCCCCCHHHHHHHHHHHH
Confidence 8999999999998754 4466666555433
No 37
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=80.34 E-value=19 Score=27.53 Aligned_cols=38 Identities=16% Similarity=0.078 Sum_probs=24.0
Q ss_pred CCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHh
Q 035619 22 KALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYK 70 (188)
Q Consensus 22 ~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~ 70 (188)
-.+.+| .+|+||..... . .. ......++...|+++.+.
T Consensus 56 pd~vii-~~G~ND~~~~~---~---~~----~~~~~~~~~~li~~i~~~ 93 (169)
T cd01831 56 PDLVVI-NLGTNDFSTGN---N---PP----GEDFTNAYVEFIEELRKR 93 (169)
T ss_pred CCEEEE-ECCcCCCCCCC---C---CC----HHHHHHHHHHHHHHHHHH
Confidence 468889 99999985321 0 01 234556666677777666
No 38
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=79.11 E-value=3 Score=37.45 Aligned_cols=69 Identities=16% Similarity=0.082 Sum_probs=48.5
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.+.++.. |+|+||+...-.... ... .-..+......+.+++..++.. +.-+|+..+.|.++-.
T Consensus 98 ~~~~~~~-~a~gnd~A~gga~~~-~~~-~~~~i~~~~~~~~~Qv~~~l~a--------------~~~~~v~~~~~~~~l~ 160 (370)
T COG3240 98 PNGLYIH-WAGGNDLAVGGARST-EPN-TGNSIGASATSLAQQVGAFLAA--------------GQGGFVWPNYPAQGLD 160 (370)
T ss_pred cccccCc-ccccccHhhhccccc-ccc-ccccccccccchHHHHHHHHHh--------------cCCccccccccccccC
Confidence 5678888 999999987532211 011 0012333445666778888899 9999999999999999
Q ss_pred chhhhh
Q 035619 101 PFMVVE 106 (188)
Q Consensus 101 P~~~~~ 106 (188)
|..+-.
T Consensus 161 p~~l~~ 166 (370)
T COG3240 161 PSALYF 166 (370)
T ss_pred HHHHHH
Confidence 988753
No 39
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=71.44 E-value=15 Score=32.48 Aligned_cols=63 Identities=19% Similarity=0.060 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHH
Q 035619 56 TVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLK 135 (188)
Q Consensus 56 vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~ 135 (188)
-++.+.+.++++.++ |.+.|+++++|+. .-+ .+ .+..| =|..+.
T Consensus 59 sid~l~~~~~~~~~~--------------Gi~~v~lFgv~~~-Kd~-----~g-----------s~A~~-----~~g~v~ 102 (322)
T PRK13384 59 PESALADEIERLYAL--------------GIRYVMPFGISHH-KDA-----KG-----------SDTWD-----DNGLLA 102 (322)
T ss_pred CHHHHHHHHHHHHHc--------------CCCEEEEeCCCCC-CCC-----Cc-----------ccccC-----CCChHH
Confidence 456777888999999 9999999999532 211 11 01111 145567
Q ss_pred HHHHHHHhhcCCcEEEEEec
Q 035619 136 DSVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 136 ~~l~~L~~~~~~a~i~~~D~ 155 (188)
+.++.+++.+|+.-+ +.|+
T Consensus 103 ~air~iK~~~pdl~v-i~DV 121 (322)
T PRK13384 103 RMVRTIKAAVPEMMV-IPDI 121 (322)
T ss_pred HHHHHHHHHCCCeEE-Eeee
Confidence 888999999998764 4454
No 40
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=70.92 E-value=16 Score=32.13 Aligned_cols=63 Identities=8% Similarity=0.023 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHH
Q 035619 56 TVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLK 135 (188)
Q Consensus 56 vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~ 135 (188)
-++.+.+.++++.++ |.+.|+++++|.. .-+. + .+..| -|..+.
T Consensus 49 s~d~l~~~~~~~~~~--------------Gi~~v~LFgv~~~-Kd~~-----g-----------s~A~~-----~~g~v~ 92 (314)
T cd00384 49 SVDSLVEEAEELADL--------------GIRAVILFGIPEH-KDEI-----G-----------SEAYD-----PDGIVQ 92 (314)
T ss_pred CHHHHHHHHHHHHHC--------------CCCEEEEECCCCC-CCCC-----c-----------ccccC-----CCChHH
Confidence 467788889999999 9999999999532 2111 1 00111 134567
Q ss_pred HHHHHHHhhcCCcEEEEEec
Q 035619 136 DSVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 136 ~~l~~L~~~~~~a~i~~~D~ 155 (188)
+.++.+++.+|+..+ ..|+
T Consensus 93 ~air~iK~~~p~l~v-i~Dv 111 (314)
T cd00384 93 RAIRAIKEAVPELVV-ITDV 111 (314)
T ss_pred HHHHHHHHhCCCcEE-EEee
Confidence 888899999998655 4453
No 41
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=69.46 E-value=8.9 Score=34.76 Aligned_cols=43 Identities=16% Similarity=-0.028 Sum_probs=28.8
Q ss_pred CeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHh
Q 035619 23 ALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYK 70 (188)
Q Consensus 23 sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~ 70 (188)
-|..| |||+||+.. +-..+ ++....++.--.+|.++++-|.+.
T Consensus 186 KLi~I-fIG~ND~c~-~c~~~---~~~~~~~~~~~~~i~~Al~~L~~n 228 (397)
T KOG3670|consen 186 KLITI-FIGTNDLCA-YCEGP---ETPPSPVDQHKRNIRKALEILRDN 228 (397)
T ss_pred EEEEE-Eeccchhhh-hccCC---CCCCCchhHHHHHHHHHHHHHHhc
Confidence 78999 999999986 32221 112233444456778888988888
No 42
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=68.62 E-value=18 Score=31.95 Aligned_cols=65 Identities=11% Similarity=0.046 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCC-CcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHH
Q 035619 56 TVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIG-CLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQL 134 (188)
Q Consensus 56 vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplG-c~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L 134 (188)
-++.+.+.++++.++ |.+.|+++++|+-. .-+.. +. ..++. |..+
T Consensus 49 s~d~l~~~~~~~~~~--------------Gi~~v~LFgv~~~~~Kd~~~----gs--~a~~~--------------~g~v 94 (320)
T cd04824 49 GVNRLEEFLRPLVAK--------------GLRSVILFGVPLKPGKDDRS----GS--AADDE--------------DGPV 94 (320)
T ss_pred CHHHHHHHHHHHHHC--------------CCCEEEEeCCCccccCCcCc----cc--cccCC--------------CChH
Confidence 456777889999999 99999999996432 22220 00 01122 3445
Q ss_pred HHHHHHHHhhcCCcEEEEEec
Q 035619 135 KDSVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 135 ~~~l~~L~~~~~~a~i~~~D~ 155 (188)
++.++.+++.+|+..+ +.|+
T Consensus 95 ~~air~iK~~~pdl~v-i~Dv 114 (320)
T cd04824 95 IQAIKLIREEFPELLI-ACDV 114 (320)
T ss_pred HHHHHHHHHhCCCcEE-EEee
Confidence 7788889999998654 4454
No 43
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=67.54 E-value=19 Score=31.82 Aligned_cols=64 Identities=8% Similarity=0.024 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCC-CcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHH
Q 035619 56 TVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIG-CLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQL 134 (188)
Q Consensus 56 vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplG-c~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L 134 (188)
-++.+.+.++++.++ |.+.|++++++|-. .-+.-.. ..|. |..+
T Consensus 52 s~d~l~~~v~~~~~~--------------Gi~~v~lFgv~~~~~KD~~gs~----------------A~~~-----~g~v 96 (320)
T cd04823 52 SIDELLKEAEEAVDL--------------GIPAVALFPVTPPELKSEDGSE----------------AYNP-----DNLV 96 (320)
T ss_pred CHHHHHHHHHHHHHc--------------CCCEEEEecCCCcccCCccccc----------------ccCC-----CChH
Confidence 467788889999999 99999999984321 2211100 1111 3456
Q ss_pred HHHHHHHHhhcCCcEEEEEec
Q 035619 135 KDSVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 135 ~~~l~~L~~~~~~a~i~~~D~ 155 (188)
.+.++.+++++|+..+ +.|+
T Consensus 97 ~~air~iK~~~p~l~v-i~DV 116 (320)
T cd04823 97 CRAIRAIKEAFPELGI-ITDV 116 (320)
T ss_pred HHHHHHHHHhCCCcEE-EEee
Confidence 7788889999998655 4454
No 44
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=64.42 E-value=24 Score=31.16 Aligned_cols=63 Identities=6% Similarity=0.041 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHH
Q 035619 56 TVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLK 135 (188)
Q Consensus 56 vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~ 135 (188)
-++.+.+.++++.++ |.+.|+++++|.. .-+ .+ .+..|. |..+.
T Consensus 57 s~d~l~~~v~~~~~~--------------Gi~av~LFgv~~~-Kd~-----~g-----------s~A~~~-----~g~v~ 100 (323)
T PRK09283 57 SIDLLVKEAEEAVEL--------------GIPAVALFGVPEL-KDE-----DG-----------SEAYNP-----DGLVQ 100 (323)
T ss_pred CHHHHHHHHHHHHHC--------------CCCEEEEeCcCCC-CCc-----cc-----------ccccCC-----CCHHH
Confidence 466777889999999 9999999998322 211 11 111111 34567
Q ss_pred HHHHHHHhhcCCcEEEEEec
Q 035619 136 DSVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 136 ~~l~~L~~~~~~a~i~~~D~ 155 (188)
+.++.+++++|+.-+ ..|+
T Consensus 101 rair~iK~~~p~l~v-i~DV 119 (323)
T PRK09283 101 RAIRAIKKAFPELGV-ITDV 119 (323)
T ss_pred HHHHHHHHhCCCcEE-EEee
Confidence 888899999998654 4454
No 45
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=64.23 E-value=25 Score=26.59 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=23.9
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHh
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYK 70 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~ 70 (188)
.-.+++| .+|+||.... .+ ......++...|+++-+.
T Consensus 64 ~pd~v~i-~~G~ND~~~~---~~---------~~~~~~~l~~li~~~~~~ 100 (177)
T cd01822 64 KPDLVIL-ELGGNDGLRG---IP---------PDQTRANLRQMIETAQAR 100 (177)
T ss_pred CCCEEEE-eccCcccccC---CC---------HHHHHHHHHHHHHHHHHC
Confidence 4468999 9999997532 11 123445666667777777
No 46
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.23 E-value=35 Score=30.36 Aligned_cols=98 Identities=12% Similarity=0.015 Sum_probs=53.0
Q ss_pred CCCeEEEeeccccchhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCc
Q 035619 21 SKALHTRLWTEGNLTPTGYLNKKVAAEQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCL 100 (188)
Q Consensus 21 ~~sL~~i~~iG~ND~~~~~~~~~~~~~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~ 100 (188)
.-+..+| .+|.||.-.-+-+.. .+... .+.=...++.-+.++.+.- ..---+++.+++||.-.
T Consensus 177 ~~a~vVV-~lGaND~q~~~~gd~--~~kf~--S~~W~~eY~kRvd~~l~ia-----------~~~~~~V~WvGmP~~r~- 239 (354)
T COG2845 177 KPAAVVV-MLGANDRQDFKVGDV--YEKFR--SDEWTKEYEKRVDAILKIA-----------HTHKVPVLWVGMPPFRK- 239 (354)
T ss_pred CccEEEE-EecCCCHHhcccCCe--eeecC--chHHHHHHHHHHHHHHHHh-----------cccCCcEEEeeCCCccc-
Confidence 4477888 999999975332221 00000 0011222233333332220 00334578888776531
Q ss_pred chhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechHHHHHH
Q 035619 101 PFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTL 162 (188)
Q Consensus 101 P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~i 162 (188)
+.+|+-...+|...+..++.+..+ ++|+++.+-+-
T Consensus 240 --------------------~~l~~dm~~ln~iy~~~vE~~~gk-------~i~i~d~~v~e 274 (354)
T COG2845 240 --------------------KKLNADMVYLNKIYSKAVEKLGGK-------FIDIWDGFVDE 274 (354)
T ss_pred --------------------cccchHHHHHHHHHHHHHHHhCCe-------EEEeccccccc
Confidence 245667788999999999988644 45666655443
No 47
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=61.19 E-value=32 Score=30.44 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHH
Q 035619 57 VSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKD 136 (188)
Q Consensus 57 v~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~ 136 (188)
++.+.+.++++.++ |.+.|+++++.+ |...... | .+..| =|..+.+
T Consensus 56 id~l~~~v~~~~~~--------------GI~~v~lFgvi~----~~~Kd~~----------g-s~a~~-----~~g~v~~ 101 (324)
T PF00490_consen 56 IDSLVKEVEEAVDL--------------GIRAVILFGVID----PSKKDEE----------G-SEAYN-----PDGLVQR 101 (324)
T ss_dssp HHHHHHHHHHHHHT--------------T--EEEEEEE-S----CSC-BSS------------GGGGS-----TTSHHHH
T ss_pred HHHHHHHHHHHHHC--------------CCCEEEEEeeCC----cccCCcc----------h-hcccC-----CCChHHH
Confidence 56677788999999 999999999832 1111111 1 00011 1345677
Q ss_pred HHHHHHhhcCCcEEEEEec
Q 035619 137 SVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 137 ~l~~L~~~~~~a~i~~~D~ 155 (188)
.++.+++.+|+..+ ..|+
T Consensus 102 air~iK~~~pdl~v-i~Dv 119 (324)
T PF00490_consen 102 AIRAIKKAFPDLLV-ITDV 119 (324)
T ss_dssp HHHHHHHHSTTSEE-EEEE
T ss_pred HHHHHHHhCCCcEE-EEec
Confidence 88899999999654 5554
No 48
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=59.70 E-value=39 Score=26.71 Aligned_cols=14 Identities=21% Similarity=-0.016 Sum_probs=12.4
Q ss_pred CCeEEEeeccccchh
Q 035619 22 KALHTRLWTEGNLTP 36 (188)
Q Consensus 22 ~sL~~i~~iG~ND~~ 36 (188)
..+.+| .+|+||..
T Consensus 78 ~d~v~i-~lG~ND~~ 91 (216)
T COG2755 78 PDLVII-MLGGNDIG 91 (216)
T ss_pred CCEEEE-Eeeccccc
Confidence 678899 99999985
No 49
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=52.09 E-value=44 Score=23.41 Aligned_cols=53 Identities=8% Similarity=0.117 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHH
Q 035619 60 LLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVS 139 (188)
Q Consensus 60 ~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~ 139 (188)
+.+.+++|.+. |+++++| .|.++..... ....+.+.++
T Consensus 46 ~~~~l~~l~~~--------------g~~~v~v--------vPlfl~~G~h--------------------~~~dip~~~~ 83 (101)
T cd03416 46 LAEALDELAAQ--------------GATRIVV--------VPLFLLAGGH--------------------VKEDIPAALA 83 (101)
T ss_pred HHHHHHHHHHc--------------CCCEEEE--------EeeEeCCCcc--------------------ccccHHHHHH
Confidence 45567777778 9999887 4666543211 1123556666
Q ss_pred HHHhhcCCcEEEEEe
Q 035619 140 DQRTQLHDAVFIHVD 154 (188)
Q Consensus 140 ~L~~~~~~a~i~~~D 154 (188)
+++.++|+.++.+.+
T Consensus 84 ~~~~~~~~~~i~~~~ 98 (101)
T cd03416 84 AARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHCCCeEEEecC
Confidence 777788998888765
No 50
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.32 E-value=21 Score=32.49 Aligned_cols=42 Identities=26% Similarity=0.416 Sum_probs=27.5
Q ss_pred CccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEech
Q 035619 85 EQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIY 156 (188)
Q Consensus 85 GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y 156 (188)
|+..+ .-+.|.||.|.-.+. +.++..|++++|+++++-+|.-
T Consensus 332 g~~nv--IclqPFGCmPnhI~~----------------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 332 GVDNV--ICLQPFGCMPNHIVS----------------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred CCCce--EEecCccCCcHHHHH----------------------------HHHHHHHHhcCCCCceEEeecC
Confidence 65554 456699999954321 3456667777788877777754
No 51
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=48.33 E-value=54 Score=27.86 Aligned_cols=85 Identities=9% Similarity=-0.008 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHH
Q 035619 53 TQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNT 132 (188)
Q Consensus 53 v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~ 132 (188)
++++++.+...++.|... .-+-=+|+.++|+--+ .+.. +. -.-..|..++.
T Consensus 147 ~~ei~~~l~~~~~~l~~~--------------nP~~kiilTVSPVrl~---~T~~-------~~--d~~~an~~SKs--- 197 (251)
T PF08885_consen 147 VEEILEDLEAIIDLLRSI--------------NPDIKIILTVSPVRLI---ATFR-------DR--DGLVANQYSKS--- 197 (251)
T ss_pred HHHHHHHHHHHHHHHHhh--------------CCCceEEEEeccchhh---cccc-------cc--cchhhhhhhHH---
Confidence 556677777777777666 4444477788886433 2211 01 11234555553
Q ss_pred HHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhh
Q 035619 133 QLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKK 168 (188)
Q Consensus 133 ~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~ 168 (188)
.|+..+.+|.+.++ ++.|+=.|.++++-++++.-
T Consensus 198 ~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lrdyrf 231 (251)
T PF08885_consen 198 TLRAAAHELVRAFD--DVDYFPSYEIVMDELRDYRF 231 (251)
T ss_pred HHHHHHHHHHhcCC--CceEcchHhhccCccccccc
Confidence 57888888887664 55778777777765554433
No 52
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=47.27 E-value=16 Score=25.86 Aligned_cols=24 Identities=4% Similarity=0.069 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhcCCcEEEEEechH
Q 035619 134 LKDSVSDQRTQLHDAVFIHVDIYS 157 (188)
Q Consensus 134 L~~~l~~L~~~~~~a~i~~~D~y~ 157 (188)
+.+.++.++.++|+.++.+....+
T Consensus 71 Ip~~l~~~~~~~~~~~v~~~~pLG 94 (105)
T PF01903_consen 71 IPEALAEARERHPGIEVRVAPPLG 94 (105)
T ss_dssp HHHHHCHHHHCSTTEEEEE---GG
T ss_pred HHHHHHHHHhhCCceEEEECCCCC
Confidence 677888999999999999876544
No 53
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=40.59 E-value=1.1e+02 Score=21.86 Aligned_cols=21 Identities=10% Similarity=0.248 Sum_probs=15.3
Q ss_pred HHHHHHHHHhhcCCcEEEEEec
Q 035619 134 LKDSVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 134 L~~~l~~L~~~~~~a~i~~~D~ 155 (188)
+...+++++++ |+.++.+..-
T Consensus 78 i~~~~~~~~~~-~~~~i~~~~p 98 (117)
T cd03414 78 IEEQVAELAAE-PGIEFVLAPP 98 (117)
T ss_pred HHHHHHHHHhC-CCceEEECCC
Confidence 55667778777 8888887654
No 54
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=39.06 E-value=62 Score=22.09 Aligned_cols=70 Identities=13% Similarity=-0.052 Sum_probs=34.8
Q ss_pred cccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHH---HHHHHHHHHHHHhhcCCcEE-EEEec
Q 035619 80 NFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEF---NTQLKDSVSDQRTQLHDAVF-IHVDI 155 (188)
Q Consensus 80 ~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~---N~~L~~~l~~L~~~~~~a~i-~~~D~ 155 (188)
.-+.+|||.++++.++=..-.|..... .....|.+..+..--..| -++|+++.+.|+++.|+.+. +++|+
T Consensus 5 ~~~~p~arSvIv~a~~Y~~~~~~~~~~------~~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VDT 78 (78)
T PF08331_consen 5 RKLLPGARSVIVLAFPYYPEPPPPPPP------PGPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVDT 78 (78)
T ss_pred HHhCCCCcEEEEEEccCCCcccccccc------CCCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeecC
Confidence 345679999999987633300000000 001122332222212222 35677777778888888633 35664
No 55
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=38.76 E-value=66 Score=24.67 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 035619 120 IKTFNVVAQEFNTQLKDSVSDQRTQLHD 147 (188)
Q Consensus 120 ~~~~n~~~~~~N~~L~~~l~~L~~~~~~ 147 (188)
.+..+.++..||..|++.|+++.+++..
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H~~ 97 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKHHA 97 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4577889999999999999999988743
No 56
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=37.39 E-value=1.4e+02 Score=26.51 Aligned_cols=65 Identities=11% Similarity=-0.010 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHH
Q 035619 56 TVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLK 135 (188)
Q Consensus 56 vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~ 135 (188)
-++.+.+.++++.++ |.+-++++++|+-.. ....+. .+..-|..++
T Consensus 59 s~d~l~~~~~~~~~l--------------Gi~av~LFgvp~~~~----Kd~~gs----------------~A~~~~givq 104 (330)
T COG0113 59 SLDRLVEEAEELVDL--------------GIPAVILFGVPDDSK----KDETGS----------------EAYDPDGIVQ 104 (330)
T ss_pred cHHHHHHHHHHHHhc--------------CCCEEEEeCCCcccc----cCcccc----------------cccCCCChHH
Confidence 467778888999999 999999999986321 111110 0111234567
Q ss_pred HHHHHHHhhcCCcEEEEEec
Q 035619 136 DSVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 136 ~~l~~L~~~~~~a~i~~~D~ 155 (188)
+.++.+++.+|+.-+ ..|+
T Consensus 105 ravr~ik~~~p~l~i-itDv 123 (330)
T COG0113 105 RAVRAIKEAFPELVV-ITDV 123 (330)
T ss_pred HHHHHHHHhCCCeEE-Eeee
Confidence 888889999985543 4443
No 57
>PF09907 DUF2136: Uncharacterized protein conserved in bacteria (DUF2136); InterPro: IPR018669 HigB (YgjN) is the toxin of the HigB-HigA toxin-antitoxin system, acting as a translation-dependent mRNA interferase. HigB inhibits protein synthesis by cleaving translated mRNAs within the coding region []. ; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=36.42 E-value=21 Score=24.75 Aligned_cols=29 Identities=10% Similarity=0.092 Sum_probs=23.0
Q ss_pred hhhhCCCCCCCCCCCCeEEEeeccccchhh
Q 035619 8 SGIRNSLPRPEDFSKALHTRLWTEGNLTPT 37 (188)
Q Consensus 8 ~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~ 37 (188)
..++..-|+.+.+.+..+++ .||||.|.-
T Consensus 22 ~elk~~f~~ad~v~~~~~vF-nI~GN~yRl 50 (76)
T PF09907_consen 22 AELKQQFPSADIVKNNRVVF-NIGGNKYRL 50 (76)
T ss_pred HHHHHHCcchhhhcCCEEEE-EcCCCcEEE
Confidence 44555567788888999999 999999853
No 58
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=35.56 E-value=20 Score=28.06 Aligned_cols=14 Identities=14% Similarity=-0.088 Sum_probs=12.7
Q ss_pred CccEEEEecCCCCC
Q 035619 85 EQEYFGSIILLPIG 98 (188)
Q Consensus 85 GAR~f~v~nlpplG 98 (188)
|||.|+.+|+|.+.
T Consensus 44 GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 44 GARDFVFWNIPQIQ 57 (169)
T ss_pred CccceEEecchhhc
Confidence 99999999998764
No 59
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=35.41 E-value=28 Score=26.14 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCcEE
Q 035619 120 IKTFNVVAQEFNTQLKDSVSDQRTQLHDAVF 150 (188)
Q Consensus 120 ~~~~n~~~~~~N~~L~~~l~~L~~~~~~a~i 150 (188)
.++.+.....||..|++.|+++.+++...-+
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H~~vIL 87 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQHHAIIL 87 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 4567889999999999999999988754333
No 60
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=30.21 E-value=75 Score=23.17 Aligned_cols=30 Identities=17% Similarity=0.266 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhhcCCcEEEEEechHHHHHHH
Q 035619 133 QLKDSVSDQRTQLHDAVFIHVDIYSAKYTLI 163 (188)
Q Consensus 133 ~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii 163 (188)
.+.-.+.+|..+||++.|+.+|+.. ..++.
T Consensus 38 ~i~P~~~~La~~y~~v~Flkvdvde-~~~~~ 67 (106)
T KOG0907|consen 38 AIAPKFEKLAEKYPDVVFLKVDVDE-LEEVA 67 (106)
T ss_pred hhhhHHHHHHHHCCCCEEEEEeccc-CHhHH
Confidence 3456888999999999999999988 44443
No 61
>COG4053 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.70 E-value=2.8e+02 Score=23.01 Aligned_cols=27 Identities=22% Similarity=-0.058 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCC
Q 035619 55 LTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILL 95 (188)
Q Consensus 55 ~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlp 95 (188)
.++..+...|++|++. ++-+..+.|+.
T Consensus 23 ~l~~~ve~~ik~ll~~--------------~~~~a~l~nit 49 (244)
T COG4053 23 KLNELVEKEIKKLLSK--------------LGIKATLSNIT 49 (244)
T ss_pred HHHHHHHHHHHHHHHh--------------hcceeEecccc
Confidence 5677788889999999 88888877764
No 62
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=29.03 E-value=1.6e+02 Score=23.59 Aligned_cols=28 Identities=18% Similarity=0.063 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEec
Q 035619 52 FTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSII 93 (188)
Q Consensus 52 ~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~n 93 (188)
-+..+-..+.+.|.+|+.. |.|.|+.-+
T Consensus 23 ~~~~ik~~L~~~i~~lie~--------------G~~~fi~Gg 50 (177)
T PF06908_consen 23 KIQVIKKALKKQIIELIEE--------------GVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTT--------------T--EEEE--
T ss_pred hHHHHHHHHHHHHHHHHHC--------------CCCEEEECC
Confidence 3556778889999999999 999998765
No 63
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=28.98 E-value=1.2e+02 Score=24.71 Aligned_cols=36 Identities=17% Similarity=0.176 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEechH
Q 035619 122 TFNVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIYS 157 (188)
Q Consensus 122 ~~n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y~ 157 (188)
........|-+.|+.+++.+++..|+++|++.-++.
T Consensus 121 ~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~ 156 (259)
T cd01823 121 ARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPR 156 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccc
Confidence 334456678889999999999999999998876543
No 64
>PF12905 Glyco_hydro_101: Endo-alpha-N-acetylgalactosaminidase; PDB: 3ECQ_B 2ZXQ_A.
Probab=28.04 E-value=69 Score=29.40 Aligned_cols=27 Identities=15% Similarity=0.223 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhhcCCcEEEEEechH
Q 035619 131 NTQLKDSVSDQRTQLHDAVFIHVDIYS 157 (188)
Q Consensus 131 N~~L~~~l~~L~~~~~~a~i~~~D~y~ 157 (188)
...+.+.+.+|+...|...++|+|+|.
T Consensus 157 sg~~~~R~~~L~~~~~~ld~iYvDV~~ 183 (425)
T PF12905_consen 157 SGARFKRFDQLKETVPNLDFIYVDVWY 183 (425)
T ss_dssp TTHHHHHHHHHHHHTTT--EEEEESTT
T ss_pred cchHHHHHHHHhccccCCCeEEEEecc
Confidence 335666678888888999999999975
No 65
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=27.94 E-value=1.8e+02 Score=25.54 Aligned_cols=66 Identities=18% Similarity=0.127 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHH
Q 035619 55 LTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQL 134 (188)
Q Consensus 55 ~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L 134 (188)
.-++.+++.+..|.+. |.|-+++++++|-+- . ...++. +..=|.-.
T Consensus 66 ~G~~rL~e~l~plv~~--------------Gl~sViLfgvv~~~~----K-d~~gs~---------------Ads~~gpv 111 (340)
T KOG2794|consen 66 LGVNRLKEELAPLVAK--------------GLRSVILFGVVPEAL----K-DPTGSE---------------ADSDNGPV 111 (340)
T ss_pred HHHHHHHHHHHHHHHh--------------ccceEEEecCCCccc----c-Cccccc---------------ccCCCCcH
Confidence 3466788899999999 999999999864321 1 111111 11113344
Q ss_pred HHHHHHHHhhcCCcEEEEEec
Q 035619 135 KDSVSDQRTQLHDAVFIHVDI 155 (188)
Q Consensus 135 ~~~l~~L~~~~~~a~i~~~D~ 155 (188)
-+.+..||..+|+.-| +.|+
T Consensus 112 i~ai~~lr~~fPdL~i-~cDV 131 (340)
T KOG2794|consen 112 IRAIRLLRDRFPDLVI-ACDV 131 (340)
T ss_pred HHHHHHHHHhCcceEE-Eeee
Confidence 5678888999998755 4443
No 66
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=27.51 E-value=1.8e+02 Score=22.54 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcEEEEEech
Q 035619 124 NVVAQEFNTQLKDSVSDQRTQLHDAVFIHVDIY 156 (188)
Q Consensus 124 n~~~~~~N~~L~~~l~~L~~~~~~a~i~~~D~y 156 (188)
......|=+.|+.+++.++++.|+++|+.+..+
T Consensus 98 ~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~ 130 (204)
T cd04506 98 KKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLY 130 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 334567878899999999999999998877543
No 67
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=27.19 E-value=63 Score=21.15 Aligned_cols=26 Identities=8% Similarity=-0.017 Sum_probs=18.2
Q ss_pred EEEEEechHHHHHHH--HhhhhcCCCcc
Q 035619 149 VFIHVDIYSAKYTLI--TQAKKYGLFYA 174 (188)
Q Consensus 149 ~i~~~D~y~~~~~ii--~nP~~yGf~~~ 174 (188)
.+-..++-..+.... =+|+.|||+..
T Consensus 23 ~v~ls~l~~~~~~~~~~f~~~~yG~~~l 50 (74)
T PF12872_consen 23 WVSLSQLGQEYKKKYPDFDPRDYGFSSL 50 (74)
T ss_dssp SEEHHHHHHHHHHHHTT--TCCTTSSSH
T ss_pred eEEHHHHHHHHHHHCCCCCccccCCCcH
Confidence 566677777777777 56889999654
No 68
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=26.20 E-value=2.2e+02 Score=25.01 Aligned_cols=46 Identities=22% Similarity=0.314 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC----cEEEEEechHHHHHHHHhhhhcCCCcc
Q 035619 123 FNVVAQEFNTQLKDSVSDQRTQLHD----AVFIHVDIYSAKYTLITQAKKYGLFYA 174 (188)
Q Consensus 123 ~n~~~~~~N~~L~~~l~~L~~~~~~----a~i~~~D~y~~~~~ii~nP~~yGf~~~ 174 (188)
+..=.+.||.+|...=+++..++.- --|++-|.|+.|++ .||.+.+
T Consensus 182 y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~~ 231 (318)
T COG4531 182 YDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKPL 231 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCcccc
Confidence 3344567888888777777766632 35778899999987 6776544
No 69
>TIGR02089 TTC tartrate dehydrogenase. Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate. These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in TIGR00169 and TIGR02088, respectively.
Probab=25.21 E-value=1.1e+02 Score=27.45 Aligned_cols=39 Identities=5% Similarity=0.124 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcC
Q 035619 132 TQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYG 170 (188)
Q Consensus 132 ~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yG 170 (188)
...++..++..++||+.++-+.=+-++.+.++.+|.+|.
T Consensus 198 ~lf~~~~~eva~~yp~v~~~~~~vD~~~~~lv~~P~~fD 236 (352)
T TIGR02089 198 PFWDEVFAEVAAEYPDVEWDSYHIDALAARFVLKPETFD 236 (352)
T ss_pred HHHHHHHHHHHhhCCCceEeeehHHHHHHHHhcChhhCc
Confidence 455666777888899988877777788899999999996
No 70
>COG1182 AcpD Acyl carrier protein phosphodiesterase [Lipid metabolism]
Probab=25.13 E-value=99 Score=25.57 Aligned_cols=27 Identities=7% Similarity=0.117 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhhcCCcEEEEEechHH
Q 035619 132 TQLKDSVSDQRTQLHDAVFIHVDIYSA 158 (188)
Q Consensus 132 ~~L~~~l~~L~~~~~~a~i~~~D~y~~ 158 (188)
.....-+++++.++|+.+|++.|.+.-
T Consensus 20 ~l~~~Fi~~yk~~~P~dev~~~DL~~e 46 (202)
T COG1182 20 KLADEFIETYKEKHPNDEVIERDLAAE 46 (202)
T ss_pred HHHHHHHHHHHHhCCCCeEEEeecccC
Confidence 444566889999999999999999863
No 71
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=23.91 E-value=79 Score=21.76 Aligned_cols=20 Identities=15% Similarity=0.099 Sum_probs=14.4
Q ss_pred HHHHHHHHHhhhhhhcccccccCCCccEEEEecC
Q 035619 61 LDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIIL 94 (188)
Q Consensus 61 ~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nl 94 (188)
.+.+.+|.+. |||-++|..+
T Consensus 53 ~~~~~~Lk~~--------------GA~~Ilv~pi 72 (75)
T PF08029_consen 53 WDLMDKLKAA--------------GASDILVLPI 72 (75)
T ss_dssp HHHHHHHHCT--------------T-EEEEEEE-
T ss_pred HHHHHHHHHc--------------CCCEEEEEec
Confidence 3456778888 9999999865
No 72
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=23.66 E-value=1.8e+02 Score=20.69 Aligned_cols=26 Identities=12% Similarity=0.296 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhhcCCcEEEEEechHH
Q 035619 133 QLKDSVSDQRTQLHDAVFIHVDIYSA 158 (188)
Q Consensus 133 ~L~~~l~~L~~~~~~a~i~~~D~y~~ 158 (188)
.+...++++.+++++.+|+.+|....
T Consensus 41 ~l~~~l~~la~~~~~v~f~~vd~~~~ 66 (113)
T cd02957 41 ILDSHLEELAAKYPETKFVKINAEKA 66 (113)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEchhh
Confidence 34556677777888999999999865
No 73
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=23.31 E-value=1e+02 Score=27.49 Aligned_cols=39 Identities=10% Similarity=0.194 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcC
Q 035619 132 TQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYG 170 (188)
Q Consensus 132 ~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yG 170 (188)
...++..++..++||+.++-+.=+-+....++.+|.+|.
T Consensus 195 glf~~~~~eva~~ypdV~~~~~~vDa~~~~Lv~~P~~fD 233 (344)
T PRK03437 195 DLWQRTVDEVAAEYPDVTVDYQHVDAATIFMVTDPSRFD 233 (344)
T ss_pred hHHHHHHHHHHhhCCCceEeehhHHHHHHHHhcCcccCc
Confidence 356667778888999988877666678889999999996
No 74
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=22.78 E-value=1.3e+02 Score=21.78 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhcCCcEEEEEechHHH
Q 035619 133 QLKDSVSDQRTQLHDAVFIHVDIYSAK 159 (188)
Q Consensus 133 ~L~~~l~~L~~~~~~a~i~~~D~y~~~ 159 (188)
.+...+++|.+++|+.+++.+|....-
T Consensus 39 ~~~p~l~~la~~~~~i~f~~Vd~~~~~ 65 (113)
T cd02989 39 IMDKHLEILAKKHLETKFIKVNAEKAP 65 (113)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEcccCH
Confidence 345566777777899999999988743
No 75
>PF15001 AP-5_subunit_s1: AP-5 complex subunit sigma-1
Probab=22.07 E-value=2.1e+02 Score=23.37 Aligned_cols=25 Identities=20% Similarity=0.190 Sum_probs=20.4
Q ss_pred CCCCCCCCCCeEEEeeccccchhhhc
Q 035619 14 LPRPEDFSKALHTRLWTEGNLTPTGY 39 (188)
Q Consensus 14 ~~~~~~~~~sL~~i~~iG~ND~~~~~ 39 (188)
+++.+.|++.-+++ |-|..+..+..
T Consensus 94 l~~gd~f~~~k~vv-W~~v~~l~ftL 118 (189)
T PF15001_consen 94 LPAGDPFSTPKIVV-WLGVGSLCFTL 118 (189)
T ss_pred ccCCCCCCCCcEEE-eeccCCEEEEE
Confidence 45567888888999 99999998754
No 76
>PRK13660 hypothetical protein; Provisional
Probab=21.93 E-value=4.3e+02 Score=21.31 Aligned_cols=27 Identities=11% Similarity=-0.053 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEec
Q 035619 53 TQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSII 93 (188)
Q Consensus 53 v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~n 93 (188)
+..+-..+++.|..+++. |.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~--------------G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEE--------------GLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHC--------------CCCEEEECC
Confidence 344556788899999999 999998766
No 77
>PRK08194 tartrate dehydrogenase; Provisional
Probab=21.77 E-value=1.3e+02 Score=26.90 Aligned_cols=39 Identities=5% Similarity=0.049 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcC
Q 035619 132 TQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYG 170 (188)
Q Consensus 132 ~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yG 170 (188)
...++.+.+..++||+..+-+.=+-++.+.++.||.+|.
T Consensus 195 ~lf~~~~~eva~~yp~V~~~~~~vDa~~~~Lv~~P~~fD 233 (352)
T PRK08194 195 PFWDEVFQEVGKDYPEIETDSQHIDALAAFFVTRPEEFD 233 (352)
T ss_pred HHHHHHHHHHHhhCCCceeeehhHHHHHHHHhhChhhCc
Confidence 455566777888899988877777778899999999996
No 78
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=21.70 E-value=4.9e+02 Score=23.30 Aligned_cols=58 Identities=14% Similarity=0.127 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHH
Q 035619 50 QSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQE 129 (188)
Q Consensus 50 ~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~ 129 (188)
.+|...+++.+.+..++-.+.+ |.++++|.+ | ..
T Consensus 239 ~sfQ~av~~~L~~kt~rAl~~~-------------~~~~lvi~G----G-----------------------------Va 272 (342)
T COG0533 239 ASFQEAVFDMLVEKTERALKHT-------------GKKELVIAG----G-----------------------------VA 272 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-------------CCCEEEEec----c-----------------------------HH
Confidence 3567777777777666655553 888877655 1 12
Q ss_pred HHHHHHHHHHHHHhhcCCcEEEEEe
Q 035619 130 FNTQLKDSVSDQRTQLHDAVFIHVD 154 (188)
Q Consensus 130 ~N~~L~~~l~~L~~~~~~a~i~~~D 154 (188)
-|+.|+++++++.+ ..|.++++.+
T Consensus 273 aN~~LR~~l~~~~~-~~g~~~~~p~ 296 (342)
T COG0533 273 ANSRLREMLEEMCK-ERGAEVYIPP 296 (342)
T ss_pred HhHHHHHHHHHHHH-hcCCEEEcCC
Confidence 48999999999876 3467776654
No 79
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=21.63 E-value=2e+02 Score=21.28 Aligned_cols=26 Identities=15% Similarity=0.293 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhc
Q 035619 120 IKTFNVVAQEFNTQLKDSVSDQRTQL 145 (188)
Q Consensus 120 ~~~~n~~~~~~N~~L~~~l~~L~~~~ 145 (188)
.++....+..||+.|.+.|.++.+++
T Consensus 56 ~~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 56 PEQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34667889999999999999998775
No 80
>PRK08997 isocitrate dehydrogenase; Provisional
Probab=21.59 E-value=1.6e+02 Score=26.18 Aligned_cols=39 Identities=8% Similarity=0.132 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcC
Q 035619 132 TQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYG 170 (188)
Q Consensus 132 ~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yG 170 (188)
...++...+..++||+.++-+.=+-++.+.++.+|.+|.
T Consensus 182 glf~~~~~eva~~yP~V~~~~~~vDa~~~~lv~~P~~fd 220 (334)
T PRK08997 182 GLFLKVAREVALRYPDIEFEEMIVDATCMQLVMNPEQFD 220 (334)
T ss_pred HHHHHHHHHHHhhCCCeEEEeeeHHHHHHHHhhCcccCc
Confidence 456666777778899988866666677789999999996
No 81
>PLN00123 isocitrate dehydrogenase (NAD+)
Probab=21.45 E-value=1.4e+02 Score=26.75 Aligned_cols=40 Identities=5% Similarity=0.184 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcC
Q 035619 131 NTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYG 170 (188)
Q Consensus 131 N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yG 170 (188)
....++.+++..++||+..+-+.=+-++.+.++.+|.+|.
T Consensus 202 ~glf~~~~~eva~eyPdV~~~~~~VDa~~~~Lv~~P~~fD 241 (360)
T PLN00123 202 DGLFLESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFD 241 (360)
T ss_pred hhHHHHHHHHHHhhCCCceEeeeeHHHHHHHHhhCcccCc
Confidence 3456667778888999998888878889999999999996
No 82
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type. The NADP-dependent IDH of Thermus aquaticus thermophilus strain HB8 resembles these NAD-dependent IDH, except for the residues involved in cofactor specificity, much more closely than it resembles other prokaryotic NADP-dependent IDH, including that of Thermus aquaticus strain YT1.
Probab=21.42 E-value=1.1e+02 Score=27.01 Aligned_cols=41 Identities=7% Similarity=0.174 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcC
Q 035619 130 FNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYG 170 (188)
Q Consensus 130 ~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yG 170 (188)
.....++.+++..++||+.++-+.=+-++...++.+|..|.
T Consensus 178 t~glf~~~~~eva~~yp~v~~~~~~vDa~~~~lv~~P~~fd 218 (333)
T TIGR00175 178 ADGLFLNVCREVAKEYPDITFESMIVDNTCMQLVSRPSQFD 218 (333)
T ss_pred hHHHHHHHHHHHHHHCCCCeeeeeeHHHHHHHHhcCccccc
Confidence 44556677778888899988887777789999999999885
No 83
>PF00180 Iso_dh: Isocitrate/isopropylmalate dehydrogenase; InterPro: IPR024084 Isocitrate dehydrogenase (IDH) [, ] is an important enzyme of carbohydrate metabolism which catalyses the oxidative decarboxylation of isocitrate into alpha-ketoglutarate. IDH is either dependent on NAD+ (1.1.1.41 from EC) or on NADP+ (1.1.1.42 from EC). In eukaryotes there are at least three isozymes of IDH: two are located in the mitochondrial matrix (one NAD+-dependent, the other NADP+-dependent), while the third one (also NADP+-dependent) is cytoplasmic. In Escherichia coli the activity of a NADP+-dependent form of the enzyme is controlled by the phosphorylation of a serine residue; the phosphorylated form of IDH is completely inactivated. 3-isopropylmalate dehydrogenase (1.1.1.85 from EC) (IMDH) [, ] catalyses the third step in the biosynthesis of leucine in bacteria and fungi, the oxidative decarboxylation of 3-isopropylmalate into 2-oxo-4-methylvalerate. Tartrate dehydrogenase (1.1.1.93 from EC) [] catalyses the reduction of tartrate to oxaloglycolate. These enzymes are evolutionary related. To this family also belongs the enzyme tartrate dehydrogenase, which shows strong homology to prokaryotic isopropylmalate dehydrogenases and, to a lesser extent, isocitrate dehydrogenase []. This entry represents a structural domain found in all types of isocitrate dehydrogenase, and in isopropylmalate dehydrogenase and tartrate dehydrogenase. The crystal structure of Escherichia coli isopropylmalate dehydrogenase has been described []. ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 1WAL_A 1CNZ_B 2D4V_C 1CM7_A 4AOY_D 3FMX_X 3FLK_C 1A05_A 1X0L_B 4F7I_D ....
Probab=21.42 E-value=1.8e+02 Score=25.73 Aligned_cols=38 Identities=11% Similarity=0.253 Sum_probs=32.3
Q ss_pred HHHHHHHHHHh-hcCCcEEEEEechHHHHHHHHhhhhcC
Q 035619 133 QLKDSVSDQRT-QLHDAVFIHVDIYSAKYTLITQAKKYG 170 (188)
Q Consensus 133 ~L~~~l~~L~~-~~~~a~i~~~D~y~~~~~ii~nP~~yG 170 (188)
..++..++..+ +||+..+-+.-+-++...++.+|..|.
T Consensus 195 lf~~~~~eva~~~yp~I~~~~~~vD~~~~~Lv~~P~~fd 233 (348)
T PF00180_consen 195 LFREVFQEVAKQEYPDIEVEHMLVDAAAMQLVKNPEQFD 233 (348)
T ss_dssp HHHHHHHHHHHHTHTTSEEEEEEHHHHHHHHHHSGGGES
T ss_pred HHHHHHHHHHHhhcceeEeeeeechhhhheeecCCccee
Confidence 55666777777 899999988888899999999999986
No 84
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=21.34 E-value=1.2e+02 Score=27.90 Aligned_cols=42 Identities=14% Similarity=-0.023 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcch
Q 035619 47 EQFQSFTQLTVSLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPF 102 (188)
Q Consensus 47 ~~~~~~v~~vv~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~ 102 (188)
.+..+..+.++..+...|++|--+ |.|-++|+.-.|.|-.-.
T Consensus 58 ~d~~~~~~~~l~~~~~~i~~l~~l--------------g~~~~~v~~~~p~~~~~~ 99 (495)
T COG5630 58 RDLHKVAPAILSQFSSVIKRLGML--------------GLRPMFVIPPSPTHVNIQ 99 (495)
T ss_pred chhhhcCHHHHHHHHHHHHHHHHc--------------CCcceEecCCCCcccccH
Confidence 345677888999999999999999 999999999888887543
No 85
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=21.18 E-value=3.4e+02 Score=21.92 Aligned_cols=48 Identities=6% Similarity=0.070 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhhhhhhcccccccCCCccEEEEecCCCCCCcchhhhhcCCCCCCCCccchhHHHHHHHHHHHHHHHHH
Q 035619 58 SLLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIILLPIGCLPFMVVEYLPKPRNEDQNGCIKTFNVVAQEFNTQLKDS 137 (188)
Q Consensus 58 ~~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nlpplGc~P~~~~~~~~~~~~~d~~gC~~~~n~~~~~~N~~L~~~ 137 (188)
..+..+++.|.+. |++++.+..+ + .. ...
T Consensus 136 ~Tl~~ai~~L~~~--------------G~~~I~v~~l--l---------~~--------------------------~~g 164 (207)
T TIGR01091 136 GTMIAALDLLKKR--------------GAKKIKVLSI--V---------AA--------------------------PEG 164 (207)
T ss_pred HHHHHHHHHHHHc--------------CCCEEEEEEE--e---------cC--------------------------HHH
Confidence 3556678888888 9999887775 1 00 234
Q ss_pred HHHHHhhcCCcEEEEEech
Q 035619 138 VSDQRTQLHDAVFIHVDIY 156 (188)
Q Consensus 138 l~~L~~~~~~a~i~~~D~y 156 (188)
++.+.+++|+.+++.+-+-
T Consensus 165 l~~l~~~~p~v~i~~~~id 183 (207)
T TIGR01091 165 IEAVEKAHPDVDIYTAAID 183 (207)
T ss_pred HHHHHHHCCCCEEEEEEEC
Confidence 5556778999999877543
No 86
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=20.86 E-value=1.3e+02 Score=21.83 Aligned_cols=22 Identities=14% Similarity=0.105 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhhhhhhcccccccCCCccEEEEecC
Q 035619 59 LLLDLIKDLLYKFHFILSCHRNFTKKEQEYFGSIIL 94 (188)
Q Consensus 59 ~~~~~i~~L~~~~~~~~~~~~~~~~~GAR~f~v~nl 94 (188)
.+.+.+.+|.+. ||+-++|..+
T Consensus 75 ~v~~~~~~Lk~~--------------GA~~Ilv~~i 96 (100)
T TIGR03455 75 VVNELIDKLKAA--------------GARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHc--------------CCCeEEEech
Confidence 344566778888 9999999764
No 87
>PLN00118 isocitrate dehydrogenase (NAD+)
Probab=20.78 E-value=1.3e+02 Score=27.09 Aligned_cols=41 Identities=10% Similarity=0.133 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhhcCCcEEEEEechHHHHHHHHhhhhcC
Q 035619 130 FNTQLKDSVSDQRTQLHDAVFIHVDIYSAKYTLITQAKKYG 170 (188)
Q Consensus 130 ~N~~L~~~l~~L~~~~~~a~i~~~D~y~~~~~ii~nP~~yG 170 (188)
.....++.+++..++||+.++-+.=+-+....++.+|.+|.
T Consensus 217 tdglf~e~~~eva~eyPdI~~~~~~VDa~a~~Lv~~P~~fD 257 (372)
T PLN00118 217 TDGLFLKCCREVAEKYPEIVYEEVIIDNCCMMLVKNPALFD 257 (372)
T ss_pred hhHHHHHHHHHHHhhCCCceEEeeeHHHHHHHhccCcccCc
Confidence 34456677778888899988777666778899999999885
No 88
>PF05692 Myco_haema: Mycoplasma haemagglutinin; InterPro: IPR008692 This family consists of several haemagglutinin sequences from Mycoplasma gallisepticum. The major plasma membrane proteins, pMGAs, of Mycoplasma gallisepticum are cell adhesin (hemagglutinin) molecules. It has been shown that the genetic determinants that code for the haemagglutinins are organised into a large family of genes and that only one of these genes is predominately expressed in any given strain [, ].
Probab=20.33 E-value=1.1e+02 Score=28.24 Aligned_cols=30 Identities=10% Similarity=-0.048 Sum_probs=19.8
Q ss_pred HhhhhCC-CCCCCCCCCCeEEEeeccccchh
Q 035619 7 ISGIRNS-LPRPEDFSKALHTRLWTEGNLTP 36 (188)
Q Consensus 7 ~~~~~~~-~~~~~~~~~sL~~i~~iG~ND~~ 36 (188)
|++|.+. .....--++..|+|||||+++-.
T Consensus 278 i~qft~l~~~~~~~~s~p~YLIG~IGGs~~R 308 (439)
T PF05692_consen 278 IRQFTGLTTNNDMQTSDPVYLIGFIGGSGNR 308 (439)
T ss_pred HHHhhhccccCCCccCCCeEEEEEecCCCcc
Confidence 4444443 23333457899999999999853
Done!