BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035622
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 26/92 (28%)
Query: 19 KIPADKMGKPFGFMNLVTAHWILVVIDVAAKTGYFMDPQGNSP---------------AE 63
K DK+ K F +NL +HW L +ID+ KT ++D N P E
Sbjct: 495 KTQIDKLDKIFTPINLNQSHWALGIIDLKKKTIGYVDSLSNGPNAMSFAILTDLQKYVME 554
Query: 64 HIKELV-----------PKQPGSYECGYYVML 84
K + P+QP Y+CG YV +
Sbjct: 555 ESKHTIGEDFDLIHLDCPQQPNGYDCGIYVCM 586
>sp|O59858|GPX1_SCHPO Glutathione peroxidase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=gpx1 PE=2 SV=1
Length = 158
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 13 MVCLYDKIPADKMGKPFGFMNLVTAHWILVVIDVAAKTGY 52
M YD P DK G PF F NL +++V++ A+K G+
Sbjct: 1 MSHFYDLAPKDKDGNPFPFSNLKGK--VVLVVNTASKCGF 38
>sp|Q7MH09|HMP_VIBVY Flavohemoprotein OS=Vibrio vulnificus (strain YJ016) GN=hmp PE=3
SV=1
Length = 394
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 8 HMHVYMVCLYDKIPAD-KMGKPFGFMNLVTAHWILVVIDVAAKTGYFMDPQG--NSPAEH 64
H H + Y++ +D K+G F F V H I V+ A YF P G A+
Sbjct: 313 HPHFNSLVWYNQPNSDDKIGDDFQFSGWVNLHEIETVLKQADVQVYFCGPVGFMQFIAKQ 372
Query: 65 IKEL-VPKQPGSYEC 78
+ E+ VP+Q YEC
Sbjct: 373 LLEMGVPEQQFHYEC 387
>sp|Q8DCU2|HMP_VIBVU Flavohemoprotein OS=Vibrio vulnificus (strain CMCP6) GN=hmp PE=3
SV=1
Length = 394
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 8 HMHVYMVCLYDKIPAD-KMGKPFGFMNLVTAHWILVVIDVAAKTGYFMDPQG--NSPAEH 64
H H + Y++ +D K+G F F V H I V+ A YF P G A+
Sbjct: 313 HPHFNSLVWYNQPNSDDKIGDDFQFSGWVNLHEIETVLKQADVQVYFCGPVGFMQFIAKQ 372
Query: 65 IKEL-VPKQPGSYEC 78
+ E+ VP+Q YEC
Sbjct: 373 LLEMGVPEQQFHYEC 387
>sp|P40609|HMP_VIBPA Flavohemoprotein OS=Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633) GN=hmp PE=3 SV=2
Length = 394
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 23 DKMGKPFGFMNLVTAHWILVVIDVAAKTGYFMDPQG--NSPAEHIKEL-VPKQPGSYEC 78
DK+G+ F F V H I + YF P G A+ ++EL VP++ YEC
Sbjct: 329 DKIGEDFHFTGFVNLHEIEAALKQDNVQVYFCGPVGFMQHVAKQLQELGVPQEQFHYEC 387
>sp|Q5UQV0|YR355_MIMIV Putative thiol protease R355 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R355 PE=1 SV=1
Length = 302
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 23 DKMGKPFGFMNLVTAHWILVVIDVAAKTGYFMDPQGNSPAEHIKELVPK 71
D+ G+P +HW+ + +D+ Y+ D G P ++I+ + K
Sbjct: 174 DRYGQP-------GSHWVAMFVDINNGKLYYCDSNGKEPTKYIENSIEK 215
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 69 VPKQPGSYECGYYVMLYMRDIIVDP 93
VPKQ S +CG Y++ Y+ DP
Sbjct: 970 VPKQDNSSDCGVYLLQYVESFFQDP 994
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 69 VPKQPGSYECGYYVMLYMRDIIVDP 93
VPKQ S +CG Y++ Y+ DP
Sbjct: 970 VPKQDNSSDCGVYLLQYVESFFQDP 994
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 69 VPKQPGSYECGYYVMLYMRDIIVDP 93
VPKQ S +CG Y++ Y+ DP
Sbjct: 983 VPKQDNSSDCGVYLLQYVESFFKDP 1007
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 69 VPKQPGSYECGYYVMLYMRDIIVDP 93
VPKQ S +CG Y++ Y+ DP
Sbjct: 980 VPKQDNSSDCGVYLLQYVESFFKDP 1004
>sp|Q96LD8|SENP8_HUMAN Sentrin-specific protease 8 OS=Homo sapiens GN=SENP8 PE=1 SV=1
Length = 212
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 46 VAAKTGYFMDPQGNSPAEHIKELVPKQPGSYECGYYVM 83
VA K F+ +G+ A ++E P Q SY+CG YV+
Sbjct: 132 VAEKLEAFLGRKGDKLA-FVEEKAPAQQNSYDCGMYVI 168
>sp|Q84177|PRO_ADEP3 Protease OS=Porcine adenovirus A serotype 3 GN=L3 PE=2 SV=1
Length = 204
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 38 HWILVVIDVAAKTGYFMDPQGNSPAE 63
HW+ V + A++T YF DP G S E
Sbjct: 53 HWLAVAWEPASRTFYFFDPFGFSDRE 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.142 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,142,967
Number of Sequences: 539616
Number of extensions: 1895079
Number of successful extensions: 4543
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4534
Number of HSP's gapped (non-prelim): 15
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)