Query 035622
Match_columns 117
No_of_seqs 97 out of 99
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 07:17:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035622.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035622hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xph_A Sentrin-specific protea 99.9 1.1E-24 3.8E-29 168.0 10.7 113 2-115 58-234 (238)
2 1euv_A ULP1 protease; SUMO hyd 99.9 1.1E-24 3.7E-29 166.4 10.2 114 2-115 47-217 (221)
3 1th0_A SMT3-, sentrin-specific 99.9 8.6E-25 2.9E-29 167.3 9.2 112 2-114 46-221 (226)
4 2bkr_A Sentrin-specific protea 99.9 3.1E-25 1E-29 167.9 6.3 115 2-116 25-209 (212)
5 2oix_A Xanthomonas outer prote 99.9 1.2E-24 4.1E-29 163.3 4.8 115 2-116 3-181 (186)
6 3eay_A Sentrin-specific protea 99.7 2E-18 6.7E-23 140.5 6.7 49 68-116 255-313 (323)
7 4ekf_A Adenain; alpha and beta 96.9 0.00095 3.2E-08 51.1 4.8 56 36-91 52-135 (204)
8 2p06_A Hypothetical protein AF 35.4 36 0.0012 22.9 3.3 32 84-115 38-87 (114)
9 2fly_A Proadrenomedullin N-20 28.0 32 0.0011 18.0 1.6 15 100-114 4-18 (26)
10 1oeg_A Apolipoprotein E; siali 27.7 19 0.00064 18.9 0.7 13 103-115 4-16 (26)
11 1z8u_A Alpha-hemoglobin stabil 25.7 48 0.0016 22.4 2.6 20 97-116 32-51 (102)
12 2lkq_A Immunoglobulin lambda-l 25.0 14 0.00049 19.0 -0.1 12 104-115 4-15 (26)
13 2kav_A Sodium channel protein 23.3 52 0.0018 22.9 2.5 21 92-112 32-52 (129)
14 2q0z_X Protein Pro2281; SEC63, 21.3 91 0.0031 24.1 3.8 46 36-82 264-311 (339)
No 1
>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A
Probab=99.91 E-value=1.1e-24 Score=167.99 Aligned_cols=113 Identities=21% Similarity=0.360 Sum_probs=93.3
Q ss_pred CccchhHHHHHHHHhhhhccCCCCCC----------------------------------ceeeccCCCceeEEEEEecC
Q 035622 2 EWLGLNHMHVYMVCLYDKIPADKMGK----------------------------------PFGFMNLVTAHWILVVIDVA 47 (117)
Q Consensus 2 ~~ls~~~v~~yi~~l~~~~~~~~~~~----------------------------------~y~Flnp~~~HW~L~vi~~~ 47 (117)
+||.-++|.+|+.+|.+.....+..+ +|.++|- +.||+|++||.+
T Consensus 58 ~wLND~iI~fy~~~L~~~~~~~~~~~~~~f~sff~~~l~~~~~~~v~~w~~~~~l~~~~~i~iPin~-~~HW~L~vi~~~ 136 (238)
T 2xph_A 58 NWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFSVDILLVPIHL-GVHWCLAVVDFR 136 (238)
T ss_dssp CCCCHHHHHHHHHHHHHHTTSTTSCCEEECCTTTTHHHHTTCHHHHTTTTTTCCGGGSSEEEEEEEE-TTEEEEEEEETT
T ss_pred CccCHHHHHHHHHHHHHhhhhcCCCceeeeecHHHHHhhhcccHHHHHHhccCCcccCCEEEEcccC-CCceEEEEEEcc
Confidence 79999999999999988764433222 2334444 689999999999
Q ss_pred CceEEEEcCCCCCCcccc------------------------------cccccCCCCccccceeeehhhHHHhhCCCCcC
Q 035622 48 AKTGYFMDPQGNSPAEHI------------------------------KELVPKQPGSYECGYYVMLYMRDIIVDPSLLL 97 (117)
Q Consensus 48 ~~~i~y~DSm~~~~~~~l------------------------------k~~ip~Q~ng~dCGyyVm~~m~~Ii~d~~~~f 97 (117)
+++++|||||++.+.+.+ ...+|+|.||+|||+|||+||+++..+.+..|
T Consensus 137 ~~~i~~~DSl~~~~~~~~~~l~~~L~~e~~~k~~~~~~~~~w~~~~~~~~~~PqQ~Ng~DCGvfvl~~~e~~~~~~~~~f 216 (238)
T 2xph_A 137 KKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINF 216 (238)
T ss_dssp TTEEEEECTTCCCCHHHHHHHHHHHHHHHHHHHCSCCCCTTCEEEECCSSSSCCCSBGGGHHHHHHHHHHHHHTTCCCCC
T ss_pred cceEEEeecccCCCHHHHHHHHHHHHHHHHHhcCCCcCcccceecccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCc
Confidence 999999999998753211 13589999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhh
Q 035622 98 NNAEMDEVRYERMNYVRV 115 (117)
Q Consensus 98 s~~~l~~vR~~wa~~~l~ 115 (117)
++++|+.+|++.+.-++.
T Consensus 217 ~q~dm~~~R~~m~~eil~ 234 (238)
T 2xph_A 217 TQQHMPYFRKRMVWEILH 234 (238)
T ss_dssp CGGGHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHh
Confidence 999999999999876653
No 2
>1euv_A ULP1 protease; SUMO hydrolase, ubiquitin-like protease 1, SMT3 hydrolase desumoylating enzyme, cysteine protease; 1.60A {Saccharomyces cerevisiae} SCOP: d.3.1.7 PDB: 2hkp_A 2hl8_A 2hl9_A
Probab=99.91 E-value=1.1e-24 Score=166.43 Aligned_cols=114 Identities=27% Similarity=0.441 Sum_probs=95.1
Q ss_pred CccchhHHHHHHHHhhhhccC--------------C-----------------CCCCceeeccCCCceeEEEEEecCCce
Q 035622 2 EWLGLNHMHVYMVCLYDKIPA--------------D-----------------KMGKPFGFMNLVTAHWILVVIDVAAKT 50 (117)
Q Consensus 2 ~~ls~~~v~~yi~~l~~~~~~--------------~-----------------~~~~~y~Flnp~~~HW~L~vi~~~~~~ 50 (117)
+||.-++|.+|+.+|.+...+ . ....+|.++|.++.||+|++||.++++
T Consensus 47 ~wLND~vI~fy~~~l~~~~~~~~~f~s~f~~~l~~~~~~~v~rw~~~~~~~~~~~~~i~iPin~~~~HW~l~vi~~~~~~ 126 (221)
T 1euv_A 47 RWLNDTIIEFFMKYIEKSTPNTVAFNSFFYTNLSERGYQGVRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKKT 126 (221)
T ss_dssp CCCBHHHHHHHHHHHHHHSTTEEECCTHHHHHHHHHTGGGTTTTTGGGTSCGGGCSEEEEEEEETTTEEEEEEEETTTTE
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEcHHHHHhhhhccHHHHHHHHhccCCcccCCEEEEEEEcCCCeEEEEEEEcCCCE
Confidence 799999999999988753211 0 123366778887899999999999999
Q ss_pred EEEEcCCCCCCcc-----------c---------------ccccccCCCCccccceeeehhhHHHhhCCCCcCChhhHHH
Q 035622 51 GYFMDPQGNSPAE-----------H---------------IKELVPKQPGSYECGYYVMLYMRDIIVDPSLLLNNAEMDE 104 (117)
Q Consensus 51 i~y~DSm~~~~~~-----------~---------------lk~~ip~Q~ng~dCGyyVm~~m~~Ii~d~~~~fs~~~l~~ 104 (117)
++|||||++.+.. . ....+|+|.||+|||+|||+||+++.++.+..|+++++++
T Consensus 127 i~~~DSl~~~~~~~~~~i~~~l~~~l~~e~~~~~~~~~~~~~~~~PqQ~N~~DCGvfv~~~~~~~~~~~~l~f~~~d~~~ 206 (221)
T 1euv_A 127 IGYVDSLSNGPNAMSFAILTDLQKYVMEESKHTIGEDFDLIHLDCPQQPNGYDCGIYVCMNTLYGSADAPLDFDYKDAIR 206 (221)
T ss_dssp EEEECSSCCSCCHHHHHHHHHHHHHHHHHTTSSSCTTCEEEEECCCCCSSSSTHHHHHHHHHHHHHTTCCCCCCHHHHHH
T ss_pred EEEEecCCCCCcchHHHHHHHHHHHHHHHHHHhcCCCceEeecCCCCCCCCcCHHHHHHHHHHHHhCCCCCCcCHHHHHH
Confidence 9999999865432 0 1135899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 035622 105 VRYERMNYVRV 115 (117)
Q Consensus 105 vR~~wa~~~l~ 115 (117)
+|++.+..+++
T Consensus 207 ~R~~i~~~Il~ 217 (221)
T 1euv_A 207 MRRFIAHLILT 217 (221)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 3
>1th0_A SMT3-, sentrin-specific protease 2; SUMO, AXAM, SENP, ULP, cell cycle, hydrolase; 2.20A {Homo sapiens} SCOP: d.3.1.7 PDB: 1tgz_A 2io0_A 2io1_A 2io2_A 2io3_A
Probab=99.91 E-value=8.6e-25 Score=167.27 Aligned_cols=112 Identities=21% Similarity=0.341 Sum_probs=91.7
Q ss_pred CccchhHHHHHHHHhhhhccCCCCC----------------------------------CceeeccCCCceeEEEEEecC
Q 035622 2 EWLGLNHMHVYMVCLYDKIPADKMG----------------------------------KPFGFMNLVTAHWILVVIDVA 47 (117)
Q Consensus 2 ~~ls~~~v~~yi~~l~~~~~~~~~~----------------------------------~~y~Flnp~~~HW~L~vi~~~ 47 (117)
+||.-++|.+|+.+|.++....+.. -+|.++|. +.||+|++||++
T Consensus 46 ~wLND~iI~fy~~~L~~~~~~~~~~~~~~f~s~f~~~l~~~~~~~v~~w~~~~~l~~~~~i~iPin~-~~HW~l~vi~~~ 124 (226)
T 1th0_A 46 HWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPKLKSGGYQAVKRWTKGVNLFEQEIILVPIHR-KVHWSLVVIDLR 124 (226)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCCCEEECCTTHHHHHHHHTGGGTGGGGTTCCGGGSSEEEEEEEE-TTEEEEEEEETT
T ss_pred CccChHHHHHHHHHHHHhhhhccCCcEEEEeHHHHHHhhhcccHHHHHHhhcCCcccCCEEEEeEEe-CcEEEEEEEEcC
Confidence 7999999999999997654322111 14444554 789999999999
Q ss_pred CceEEEEcCCCCCCcccc------------------------------cccccCCCCccccceeeehhhHHHhhCCCCcC
Q 035622 48 AKTGYFMDPQGNSPAEHI------------------------------KELVPKQPGSYECGYYVMLYMRDIIVDPSLLL 97 (117)
Q Consensus 48 ~~~i~y~DSm~~~~~~~l------------------------------k~~ip~Q~ng~dCGyyVm~~m~~Ii~d~~~~f 97 (117)
+++++|||||++.+.... ...+|+|.||+|||+|||+||+++.++.+..|
T Consensus 125 ~~~i~~~DSl~~~~~~~~~~l~~~l~~e~~~k~~~~~~~~~w~~~~~~~~~~PqQ~Ng~DCGvfvl~~~~~~~~~~~~~f 204 (226)
T 1th0_A 125 KKCLKYLDSMGQKGHRICEILLQYLQDESKTKRNSDLNLLEWTHHSMKPHEIPQQLNGSDCGMFTCKYADYISRDKPITF 204 (226)
T ss_dssp TTEEEEECTTCCCCHHHHHHHHHHHHHHHHHHTSCCCCGGGCEEEECCTTTSCCCCSSSCHHHHHHHHHHHHTTTCCCCC
T ss_pred CCceEEEcCCCCCchHHHHHHHHHHHHHHHHhcCCCCCcccceeccccCCCCCCCCCCCCHHHHHHHHHHHHhCCCCCcc
Confidence 999999999998763210 13689999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHh
Q 035622 98 NNAEMDEVRYERMNYVR 114 (117)
Q Consensus 98 s~~~l~~vR~~wa~~~l 114 (117)
++++|+.+|++.+.=++
T Consensus 205 ~q~dm~~~R~~~~~ei~ 221 (226)
T 1th0_A 205 TQHQMPLFRKKMVWEIL 221 (226)
T ss_dssp CGGGHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHH
Confidence 99999999999987554
No 4
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A
Probab=99.91 E-value=3.1e-25 Score=167.88 Aligned_cols=115 Identities=23% Similarity=0.329 Sum_probs=93.8
Q ss_pred CccchhHHHHHHHHhhhhccCCC-----------------------------------CCCceeeccC------CCceeE
Q 035622 2 EWLGLNHMHVYMVCLYDKIPADK-----------------------------------MGKPFGFMNL------VTAHWI 40 (117)
Q Consensus 2 ~~ls~~~v~~yi~~l~~~~~~~~-----------------------------------~~~~y~Flnp------~~~HW~ 40 (117)
+||.-++|.||+.+|.+.....+ ..-+|.++|. ++.||+
T Consensus 25 ~wLND~iI~fy~~~L~~~~~~~~~~~~~~~~p~~s~f~~~~~~~~~v~~~~~~~~l~~~~~i~iPIn~n~~~~~~~~HW~ 104 (212)
T 2bkr_A 25 SWLNDHIIGFAFEYFANSQFHDSSDHVSFISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGSHWS 104 (212)
T ss_dssp SCCBHHHHHHHHHHHHHTTTGGGTTTEEEECHHHHHHHHHCCCHHHHHHHHGGGTGGGCSEEEEEEECCCSSSSBCCCEE
T ss_pred CCcCHHHHHHHHHHHHHhhccCCCCcEEEEChHHHHHHHhCCCHHHHHHHhcccccccCCEEEEEEecCCCCCCCCCCeE
Confidence 79999999999999998774222 1123344553 479999
Q ss_pred EEEEecCCceEEEEcCCCCCCccc---------------------ccccccCCCCccccceeeehhhHHHhhCC------
Q 035622 41 LVVIDVAAKTGYFMDPQGNSPAEH---------------------IKELVPKQPGSYECGYYVMLYMRDIIVDP------ 93 (117)
Q Consensus 41 L~vi~~~~~~i~y~DSm~~~~~~~---------------------lk~~ip~Q~ng~dCGyyVm~~m~~Ii~d~------ 93 (117)
|+|||.++++++|||||++.+... ....+|+|.||+|||+|||.||++++++.
T Consensus 105 L~vi~~~~~~i~~~DSl~~~n~~~~~~l~~~l~~~l~~~~~~~~~~~~~~PqQ~N~~DCGvfvl~~~~~l~~~~~~~~~~ 184 (212)
T 2bkr_A 105 LLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFRQQTE 184 (212)
T ss_dssp EEEEEGGGTEEEEECSSTTTTHHHHHHHHHHHHHHHSCTTCCCCEEECCCCCCSSSSTHHHHHHHHHHHHHHHHHSCCCC
T ss_pred EEEEEecCCeEEEEeCCCCCCHHHHHHHHHHHHHHhCCccccceEeECCCCCCCCCCcHHHHHHHHHHHHHHHhhhcCcc
Confidence 999999999999999999876432 12458999999999999999999999853
Q ss_pred --CCcCChhhHHHHHHHHHHHHhhh
Q 035622 94 --SLLLNNAEMDEVRYERMNYVRVL 116 (117)
Q Consensus 94 --~~~fs~~~l~~vR~~wa~~~l~l 116 (117)
...|++++++.+|+++.+.+++|
T Consensus 185 ~~~~~~~~~~i~~~R~~i~~lI~~L 209 (212)
T 2bkr_A 185 SLLQLLTPAYITKKRGEWKDLIATL 209 (212)
T ss_dssp CHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHHHHHHHH
Confidence 23588999999999999999886
No 5
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A
Probab=99.90 E-value=1.2e-24 Score=163.25 Aligned_cols=115 Identities=18% Similarity=0.245 Sum_probs=90.2
Q ss_pred CccchhHHHHHHHHhhhhccCCCCCCceeeccC------------------------------------CCceeEEEEEe
Q 035622 2 EWLGLNHMHVYMVCLYDKIPADKMGKPFGFMNL------------------------------------VTAHWILVVID 45 (117)
Q Consensus 2 ~~ls~~~v~~yi~~l~~~~~~~~~~~~y~Flnp------------------------------------~~~HW~L~vi~ 45 (117)
+||.-++|.||+.+|.+........+++.|++| ++.||+|+|||
T Consensus 3 ~WLND~iI~fy~~~L~~~~~~~~~~~~v~f~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~iPin~~~~HWsLlvi~ 82 (186)
T 2oix_A 3 SWLLDGHLRAYTDDLARRLRGEPNAHLLHFADSQVVTMLSSADPDQQARAQRLLAGDDIPPIVFLPINQPNAHWSLLVVD 82 (186)
T ss_dssp CCCCHHHHHHHHHHHHHHTTTSTTGGGEEECCHHHHHHTTCSSHHHHHHHHHHHHSTTSCSEEEEEEEETTTEEEEEEEE
T ss_pred CCcChHHHHHHHHHHHHHhhhccCcceEEEECHHHHHHHHhCCHHHHHHHHHHcccccccCEEEEEEeCCCCccEEEEEE
Confidence 799999999999999998754433333555543 47899999999
Q ss_pred cCCceE---EEEcCCCCCCcc------------------cccccccCCCCccccceeeehhhHHHhh-------CCCCcC
Q 035622 46 VAAKTG---YFMDPQGNSPAE------------------HIKELVPKQPGSYECGYYVMLYMRDIIV-------DPSLLL 97 (117)
Q Consensus 46 ~~~~~i---~y~DSm~~~~~~------------------~lk~~ip~Q~ng~dCGyyVm~~m~~Ii~-------d~~~~f 97 (117)
.+++++ +|||||++.... .....+|+|.||+|||+|||.||+++++ +....+
T Consensus 83 ~~~~~~~~~~~~DSl~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~PqQ~Ng~DCGvfv~~~~~~l~~~~~~~~~~~~~~~ 162 (186)
T 2oix_A 83 RRNKDAVAAYHYDSMAQKDPQQRYLADMAAYHLGLDYQQTHEMPIAIQSDGYSAGDHVLTGIEVLAHRVLDGTFDYAGGR 162 (186)
T ss_dssp CSSTTSCEEEEECCCSSCCHHHHHHHHHHHHHTTCCGGGCEEECBCCCC--CCHHHHHHHHHHHHHHHHHHTCTTSTTTT
T ss_pred CCCCeeeeeEEEcCCCCCCHHHHHHHHHHHHHhCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCccCCCcC
Confidence 999999 999999974321 0123589999999999999999999987 223457
Q ss_pred ChhhHHHHHHHHHHHHhhh
Q 035622 98 NNAEMDEVRYERMNYVRVL 116 (117)
Q Consensus 98 s~~~l~~vR~~wa~~~l~l 116 (117)
+.++++..|++++++++++
T Consensus 163 ~~~~i~~~R~~i~~lI~~~ 181 (186)
T 2oix_A 163 DLTDIEPDRGLIRDRLAQA 181 (186)
T ss_dssp CBTTCCCCHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 7899999999999998764
No 6
>3eay_A Sentrin-specific protease 7; ULP, SENP, SUMO, ubiquitin, crystal, alternative splicing, hydrolase, phosphoprotein, polymorphism, thiol protease; 2.40A {Homo sapiens}
Probab=99.74 E-value=2e-18 Score=140.50 Aligned_cols=49 Identities=27% Similarity=0.476 Sum_probs=44.2
Q ss_pred cccCCCCccccceeeehhhHHHhhCCCCc----------CChhhHHHHHHHHHHHHhhh
Q 035622 68 LVPKQPGSYECGYYVMLYMRDIIVDPSLL----------LNNAEMDEVRYERMNYVRVL 116 (117)
Q Consensus 68 ~ip~Q~ng~dCGyyVm~~m~~Ii~d~~~~----------fs~~~l~~vR~~wa~~~l~l 116 (117)
.+|+|.||+|||+|||+||+++..+++.. |+++++...|+++..++++|
T Consensus 255 ~~P~Q~N~~DCGvfvl~~~e~~~~~~~~~f~~~~~~~~wf~~~~i~~kR~ei~~LI~~L 313 (323)
T 3eay_A 255 KVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKL 313 (323)
T ss_dssp BCCCCCSTTCHHHHHHHHHHHHHHSCCCCCCSSCBCTTSSCHHHHHTHHHHHHHHHHHH
T ss_pred CCCCcCCCCcHHHHHHHHHHHHHhCCccccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999988553 56799999999999999886
No 7
>4ekf_A Adenain; alpha and beta protein (A+B), hydrolase; HET: CSD; 0.98A {Human adenovirus 2} PDB: 1nln_A 1avp_A
Probab=96.95 E-value=0.00095 Score=51.14 Aligned_cols=56 Identities=21% Similarity=0.424 Sum_probs=43.5
Q ss_pred CceeEEEEEecCCceEEEEcCCCCCCcc------------------------ccccc----ccCCCCccccceeeehhhH
Q 035622 36 TAHWILVVIDVAAKTGYFMDPQGNSPAE------------------------HIKEL----VPKQPGSYECGYYVMLYMR 87 (117)
Q Consensus 36 ~~HW~L~vi~~~~~~i~y~DSm~~~~~~------------------------~lk~~----ip~Q~ng~dCGyyVm~~m~ 87 (117)
++||.-.+-||+.++.|.|||+|-...+ +++-+ -=|=++|--||.|.|-|.-
T Consensus 52 GvHWiA~Aw~P~s~~~YmFDPfG~sd~~L~qiY~F~Y~~llkRSAL~sspdRCv~LvkstqsVQcp~SaACGLFC~lFL~ 131 (204)
T 4ekf_A 52 GVHWMAFAWNPRSKTCYLFEPFGFSDQRLKQVYQFEYESLLRRSAIASSPDRCITLEKSTQSVQGPNSAAAGLFCCMFLH 131 (204)
T ss_dssp CCCEEEEEEETTTTEEEEECTBTTCSHHHHHHHHHHHHHHHHHHCC--------EEEECCSBCSCTTCCCHHHHHHHHHH
T ss_pred ceeEEEeEecCCcceEEEeCCCCCCHHHHHHHhhhhHHHHHHHHhhcCCCCceeEEEeccccccCcCchhHHHHHHHHHH
Confidence 8999999999999999999988755432 22211 1145788999999999998
Q ss_pred HHhh
Q 035622 88 DIIV 91 (117)
Q Consensus 88 ~Ii~ 91 (117)
.+..
T Consensus 132 aF~~ 135 (204)
T 4ekf_A 132 AFAN 135 (204)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8888
No 8
>2p06_A Hypothetical protein AF_0060; MCSG, PSI2, MAD, structural genomics, singleton, predicted C region AF_0060; 2.10A {Archaeoglobus fulgidus dsm 4304} SCOP: a.204.1.3
Probab=35.38 E-value=36 Score=22.92 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=20.9
Q ss_pred hhhHHHhhCCCC-----cCCh--------hhHHHHHH-----HHHHHHhh
Q 035622 84 LYMRDIIVDPSL-----LLNN--------AEMDEVRY-----ERMNYVRV 115 (117)
Q Consensus 84 ~~m~~Ii~d~~~-----~fs~--------~~l~~vR~-----~wa~~~l~ 115 (117)
+||+.+++.++. .||+ +||.++|+ +|.++--+
T Consensus 38 kymkrvsrpgntprpwfdfseerllsrlfeemdelreavekedwenlrde 87 (114)
T 2p06_A 38 KYMKRVSRPGNTPRPWFDFSEERLLSRLFEEMDELREAVEKEDWENLRDE 87 (114)
T ss_dssp HHHHHHTSTTCCSCHHHHSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHccCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588888884443 2554 78888886 46665433
No 9
>2fly_A Proadrenomedullin N-20 terminal peptide; alpha helix, hormone/growth factor complex; NMR {Homo sapiens}
Probab=27.96 E-value=32 Score=17.97 Aligned_cols=15 Identities=13% Similarity=0.094 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHHh
Q 035622 100 AEMDEVRYERMNYVR 114 (117)
Q Consensus 100 ~~l~~vR~~wa~~~l 114 (117)
|-.+++|++|-+.-+
T Consensus 4 d~~sefrKKwn~w~l 18 (26)
T 2fly_A 4 DVASEFRKKWNKWAL 18 (26)
T ss_pred cccHHHHHHHHHHHH
Confidence 456899999987655
No 10
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=27.72 E-value=19 Score=18.86 Aligned_cols=13 Identities=8% Similarity=0.222 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHhh
Q 035622 103 DEVRYERMNYVRV 115 (117)
Q Consensus 103 ~~vR~~wa~~~l~ 115 (117)
..+|++|++++=.
T Consensus 4 e~mr~Q~~~lveK 16 (26)
T 1oeg_A 4 EDMQRQWAGLVEK 16 (26)
T ss_dssp HHTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5689999998743
No 11
>1z8u_A Alpha-hemoglobin stabilizing protein; alpha haemoglobin, AHSP, oxidation, interaction, electron transport; HET: HEM; 2.40A {Homo sapiens} SCOP: a.7.11.1 PDB: 1y01_A* 1w0b_A 3ovu_A* 1w09_A 1w0a_A 3ia3_A* 1xzy_A
Probab=25.71 E-value=48 Score=22.41 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=17.7
Q ss_pred CChhhHHHHHHHHHHHHhhh
Q 035622 97 LNNAEMDEVRYERMNYVRVL 116 (117)
Q Consensus 97 fs~~~l~~vR~~wa~~~l~l 116 (117)
.+.++|..+=++|.+|++.+
T Consensus 32 i~ee~MvtvV~DWvnfYiny 51 (102)
T 1z8u_A 32 VSEEDMVTVVEDWMNFYINY 51 (102)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 57999999999999998864
No 12
>2lkq_A Immunoglobulin lambda-like polypeptide 1; PRE-BCR, B cell development, immune system; NMR {Homo sapiens}
Probab=25.00 E-value=14 Score=19.01 Aligned_cols=12 Identities=8% Similarity=0.102 Sum_probs=10.1
Q ss_pred HHHHHHHHHHhh
Q 035622 104 EVRYERMNYVRV 115 (117)
Q Consensus 104 ~vR~~wa~~~l~ 115 (117)
.+|.+|..|++|
T Consensus 4 slrsrwgrfllq 15 (26)
T 2lkq_A 4 SLRSRWGRFLLQ 15 (26)
T ss_dssp TTTTHHHHHTHH
T ss_pred hHHHHHHHHHHH
Confidence 478999999887
No 13
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=23.33 E-value=52 Score=22.91 Aligned_cols=21 Identities=5% Similarity=0.091 Sum_probs=17.4
Q ss_pred CCCCcCChhhHHHHHHHHHHH
Q 035622 92 DPSLLLNNAEMDEVRYERMNY 112 (117)
Q Consensus 92 d~~~~fs~~~l~~vR~~wa~~ 112 (117)
+.+...+++++.++++.|+.|
T Consensus 32 ~~~~~l~~~dl~~F~~~W~~f 52 (129)
T 2kav_A 32 ESAEPLSEDDFEMFYEVWEKF 52 (129)
T ss_dssp SCSCSSCHHHHHHHHHHHHHH
T ss_pred hhccCCCHHHHHHHHHHHHhc
Confidence 445556899999999999987
No 14
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=21.35 E-value=91 Score=24.11 Aligned_cols=46 Identities=13% Similarity=0.225 Sum_probs=30.6
Q ss_pred CceeEEEEEecCCceEEEEcCCCCCC--cccccccccCCCCccccceee
Q 035622 36 TAHWILVVIDVAAKTGYFMDPQGNSP--AEHIKELVPKQPGSYECGYYV 82 (117)
Q Consensus 36 ~~HW~L~vi~~~~~~i~y~DSm~~~~--~~~lk~~ip~Q~ng~dCGyyV 82 (117)
.-.|-+++-|.+++.++.+.-..-.. ...++-.+| ++|.+..-+++
T Consensus 264 ~e~wwi~v~d~~~~~ll~~~r~~l~~~~~~~l~f~~P-~~g~~~~~v~~ 311 (339)
T 2q0z_X 264 EEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAP-ATGAHNYTLYF 311 (339)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECCSSEEEEEEEEECC-SSEEEEEEEEE
T ss_pred CCcEEEEEEECCCCEEEEEEEEecccceEEEEEEECC-CCCCeeEEEEE
Confidence 46799999999999999888554332 234555678 67665544433
Done!