Query 035623
Match_columns 202
No_of_seqs 135 out of 1863
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 04:40:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035623.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035623hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 1.6E-51 3.4E-56 343.1 18.6 197 2-202 302-499 (499)
2 KOG0156 Cytochrome P450 CYP2 s 100.0 3E-50 6.4E-55 338.3 17.7 195 1-202 293-488 (489)
3 PLN03234 cytochrome P450 83B1; 100.0 5.4E-50 1.2E-54 341.1 18.8 202 1-202 295-499 (499)
4 PLN02183 ferulate 5-hydroxylas 100.0 1.2E-49 2.5E-54 340.3 18.4 200 2-201 312-511 (516)
5 PLN02971 tryptophan N-hydroxyl 100.0 3.6E-49 7.8E-54 338.9 19.2 198 1-201 334-533 (543)
6 PLN02394 trans-cinnamate 4-mon 100.0 3.3E-49 7.2E-54 336.5 18.2 199 2-202 301-502 (503)
7 PLN02169 fatty acid (omega-1)- 100.0 2.5E-48 5.5E-53 330.7 17.6 190 2-202 309-500 (500)
8 PLN02966 cytochrome P450 83A1 100.0 5.4E-48 1.2E-52 329.0 19.1 199 1-200 296-498 (502)
9 PLN02687 flavonoid 3'-monooxyg 100.0 1E-47 2.2E-52 328.4 19.4 201 2-202 305-509 (517)
10 PTZ00404 cytochrome P450; Prov 100.0 6.8E-48 1.5E-52 326.9 17.2 190 2-201 291-482 (482)
11 KOG0157 Cytochrome P450 CYP4/C 100.0 1E-47 2.2E-52 326.2 18.2 195 2-202 299-496 (497)
12 PLN00110 flavonoid 3',5'-hydro 100.0 1.6E-47 3.6E-52 326.0 18.8 198 1-201 296-496 (504)
13 PLN03112 cytochrome P450 famil 100.0 1.9E-47 4.1E-52 326.5 18.9 201 1-201 303-507 (514)
14 PLN00168 Cytochrome P450; Prov 100.0 2.2E-47 4.7E-52 326.5 18.0 198 2-202 314-517 (519)
15 PLN02738 carotene beta-ring hy 100.0 3.4E-47 7.3E-52 330.1 18.7 197 1-202 398-595 (633)
16 KOG0159 Cytochrome P450 CYP11/ 100.0 1.3E-47 2.9E-52 315.0 14.4 194 1-201 323-517 (519)
17 PLN02500 cytochrome P450 90B1 100.0 3.5E-47 7.7E-52 323.2 17.5 173 1-173 286-468 (490)
18 PLN02290 cytokinin trans-hydro 100.0 5.2E-47 1.1E-51 324.0 17.5 192 1-202 323-515 (516)
19 PF00067 p450: Cytochrome P450 100.0 1.9E-47 4.1E-52 318.9 14.3 171 2-173 270-441 (463)
20 PLN03195 fatty acid omega-hydr 100.0 4.3E-47 9.4E-52 324.5 16.3 196 1-202 299-516 (516)
21 PLN03018 homomethionine N-hydr 100.0 1.6E-46 3.5E-51 321.5 19.0 198 1-201 321-523 (534)
22 PLN02426 cytochrome P450, fami 100.0 1.2E-46 2.6E-51 320.3 17.8 197 2-202 301-500 (502)
23 PLN02655 ent-kaurene oxidase 100.0 4.1E-46 8.8E-51 314.9 17.3 194 1-201 269-463 (466)
24 PLN02774 brassinosteroid-6-oxi 100.0 6E-46 1.3E-50 313.6 17.6 188 2-200 272-462 (463)
25 PLN03141 3-epi-6-deoxocathaste 100.0 9.8E-46 2.1E-50 311.5 17.3 188 1-201 258-449 (452)
26 PLN02936 epsilon-ring hydroxyl 100.0 5.3E-45 1.1E-49 309.7 17.7 195 1-201 285-481 (489)
27 PLN02302 ent-kaurenoic acid ox 100.0 1.1E-44 2.4E-49 307.7 17.2 189 2-201 295-487 (490)
28 KOG0684 Cytochrome P450 [Secon 100.0 1.2E-44 2.5E-49 292.1 15.3 197 2-202 281-485 (486)
29 PLN02987 Cytochrome P450, fami 100.0 3E-44 6.4E-49 303.6 18.3 191 2-201 275-468 (472)
30 PLN02196 abscisic acid 8'-hydr 100.0 1.2E-44 2.7E-49 305.6 15.8 187 2-200 272-461 (463)
31 PLN02648 allene oxide synthase 100.0 7.4E-38 1.6E-42 264.3 15.3 165 5-173 283-463 (480)
32 COG2124 CypX Cytochrome P450 [ 100.0 3.7E-38 8.1E-43 262.3 13.0 144 2-172 244-387 (411)
33 PF08492 SRP72: SRP72 RNA-bind 56.1 9.3 0.0002 22.8 1.7 8 115-122 44-51 (59)
34 PF09201 SRX: SRX; InterPro: 45.2 21 0.00046 25.2 2.3 23 142-164 18-40 (148)
35 PF05952 ComX: Bacillus compet 43.6 27 0.00059 20.7 2.3 23 15-37 3-25 (57)
36 COG2101 SPT15 TATA-box binding 40.5 9.8 0.00021 28.0 0.1 36 112-148 35-70 (185)
37 PF12508 DUF3714: Protein of u 39.5 28 0.00061 26.4 2.4 44 52-96 51-94 (200)
38 PF11138 DUF2911: Protein of u 38.6 50 0.0011 23.6 3.5 41 76-117 51-98 (145)
39 PF12444 Sox_N: Sox developmen 36.1 25 0.00053 22.7 1.4 20 152-171 60-79 (84)
40 TIGR03779 Bac_Flav_CT_M Bacter 35.2 7.9 0.00017 32.6 -1.2 20 78-97 279-298 (410)
41 cd00652 TBP_TLF TATA box bindi 35.0 38 0.00082 25.0 2.5 55 112-168 29-86 (174)
42 PF02663 FmdE: FmdE, Molybdenu 32.9 44 0.00095 23.2 2.4 22 142-163 5-26 (131)
43 cd04518 TBP_archaea archaeal T 32.4 14 0.00031 27.3 -0.1 35 112-147 29-63 (174)
44 KOG3506 40S ribosomal protein 32.2 21 0.00046 20.8 0.6 10 135-144 12-21 (56)
45 PRK00394 transcription factor; 32.0 46 0.001 24.7 2.5 34 112-146 28-61 (179)
46 PF08285 DPM3: Dolichol-phosph 31.7 79 0.0017 20.6 3.3 27 13-39 55-81 (91)
47 PF14824 Sirohm_synth_M: Siroh 25.7 1E+02 0.0022 15.6 2.4 15 24-38 15-29 (30)
48 PF14550 Peptidase_U35_2: Puta 24.2 54 0.0012 22.7 1.6 22 76-97 72-93 (122)
49 PF09388 SpoOE-like: Spo0E lik 24.0 1.4E+02 0.0029 16.4 3.0 38 28-65 6-43 (45)
50 PF13993 YccJ: YccJ-like prote 23.6 71 0.0015 19.2 1.8 30 5-34 9-39 (69)
51 PF11227 DUF3025: Protein of u 23.6 51 0.0011 25.2 1.5 21 98-118 191-211 (212)
52 PRK06789 flagellar motor switc 22.9 1.3E+02 0.0028 18.8 3.0 39 59-97 21-62 (74)
53 PLN00062 TATA-box-binding prot 21.3 29 0.00062 25.8 -0.2 54 112-167 29-85 (179)
54 PF14129 DUF4296: Domain of un 20.2 2.4E+02 0.0053 17.9 4.2 33 7-39 46-78 (87)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-51 Score=343.13 Aligned_cols=197 Identities=31% Similarity=0.472 Sum_probs=177.5
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC 81 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~ 81 (202)
|++||+|||+++++.++|+|++||++|+|||+||+++......++.+.+.+|+||++||+||||+||+++.+.|.+++|+
T Consensus 302 Fl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~ 381 (499)
T KOG0158|consen 302 FLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDY 381 (499)
T ss_pred HHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCce
Confidence 57899999999999999999999999999999999997766559999999999999999999999999999999999999
Q ss_pred eec-CeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623 82 VVD-GHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN 160 (202)
Q Consensus 82 ~~~-~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ 160 (202)
+++ ++.|++|+.|.++.+++||||++||||++|+||||.+++.. ...+..|+|||.|||.|+|++||.+++|++++.
T Consensus 382 ~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~--~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~ 459 (499)
T KOG0158|consen 382 EIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK--SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAH 459 (499)
T ss_pred ecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc--ccCCccccCCCCCccccHHHHHHHHHHHHHHHH
Confidence 999 99999999999999999999999999999999999987432 446779999999999999999999999999999
Q ss_pred HHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 161 LLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
||++|+++..+.+ .........+++..|+.++++++++|.
T Consensus 460 lL~~f~~~~~~~t--~~~~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 460 LLRNFSFEVCPTT--IIPLEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred HHhhCEEecCCcc--cCcccCCccceeeecCCceEEEEEeCC
Confidence 9999999987733 222222234777888889999999984
No 2
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-50 Score=338.26 Aligned_cols=195 Identities=50% Similarity=0.879 Sum_probs=176.6
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~ 79 (202)
|+++||+|||++++.|++.+|++||++|+|+++||+++++.++.++.+++.++|||+|+|+|++|++|++| .++|.+++
T Consensus 293 dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~ 372 (489)
T KOG0156|consen 293 DLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTE 372 (489)
T ss_pred HHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccC
Confidence 68999999999999999999999999999999999999998888999999999999999999999999999 78999999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA 159 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~ 159 (202)
|+.++||.||+||.|.++.|++|+||++|+||++|+||||++++ +.......++|||.|+|.|||+.+|.+++.++++
T Consensus 373 d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~--d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la 450 (489)
T KOG0156|consen 373 DTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN--DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLA 450 (489)
T ss_pred CeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc--cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999974 2223567899999999999999999999999999
Q ss_pred HHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 160 NLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
.++++|||+++++ .++.... +.+...+.++.+.+.+|.
T Consensus 451 ~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 451 NLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPVPRL 488 (489)
T ss_pred HHHheeeeecCCC----CCCCccc-ccceecCCcceeeeecCC
Confidence 9999999999876 3444444 355666667777777763
No 3
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=5.4e-50 Score=341.10 Aligned_cols=202 Identities=51% Similarity=0.954 Sum_probs=180.8
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCC-CccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~-~~r~~~~ 79 (202)
++++||+|||+.+++|++++|++||++|+|+++|++++++..+.++.+++.+|||+++||+|++|++|+++. +.|.+.+
T Consensus 295 ~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~ 374 (499)
T PLN03234 295 DIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIA 374 (499)
T ss_pred HHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCC
Confidence 468999999999999999999999999999999999998876778999999999999999999999999995 5799999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCC-CCCCCCCCCCCCCCCCC-CcCCCccceeccCCCCCCCccHHHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFIGTDCV-DFQGQHFQLLPFGSGRRICPGISMAMRTLELA 157 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~ 157 (202)
|++++|+.||+||.|.++.+.+|+||++| +||++|||+||++++.. .....+..|+|||+|+|+|+|+++|.++++++
T Consensus 375 d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 454 (499)
T PLN03234 375 DAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIP 454 (499)
T ss_pred CeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999 89999999999975322 12234568999999999999999999999999
Q ss_pred HHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 158 LANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
++.++++|+++++++..++.+......++...++.++.+.+++|+
T Consensus 455 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (499)
T PLN03234 455 FANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKHI 499 (499)
T ss_pred HHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecCC
Confidence 999999999999876544455555567888878889999999986
No 4
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1.2e-49 Score=340.26 Aligned_cols=200 Identities=41% Similarity=0.787 Sum_probs=174.8
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC 81 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~ 81 (202)
+++||+|||+.+++|++++|++||++|+|+++|++++++..+.++.+++.++||+++|++|++|++|+++...|.+.+|+
T Consensus 312 ~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~ 391 (516)
T PLN02183 312 VMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDA 391 (516)
T ss_pred HHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCce
Confidence 67899999999999999999999999999999999998766678999999999999999999999999997779999999
Q ss_pred eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623 82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL 161 (202)
Q Consensus 82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l 161 (202)
+++|+.||+||.|.++.+.+||||++|+||++|+|+||++++........+.|+|||.|+|+|+|++||.+|+++++|.+
T Consensus 392 ~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~l 471 (516)
T PLN02183 392 EVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHL 471 (516)
T ss_pred eECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999975332222345689999999999999999999999999999
Q ss_pred HhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 162 LYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 162 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
+++|+++..++......+.....+.+.+..+++++.+++|
T Consensus 472 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 511 (516)
T PLN02183 472 LHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR 511 (516)
T ss_pred HheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence 9999999877643223443334455555556888888887
No 5
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=3.6e-49 Score=338.89 Aligned_cols=198 Identities=25% Similarity=0.528 Sum_probs=173.8
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~ 79 (202)
++++||+|||+.+++|++++|+.||++|+|+++||+++++.++.++.+++.+|||++|||+|++|++|+++ .++|.+.+
T Consensus 334 ~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~ 413 (543)
T PLN02971 334 ELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALS 413 (543)
T ss_pred HHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCC
Confidence 57899999999999999999999999999999999999987778899999999999999999999999999 47899999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCC-CcCCCccceeccCCCCCCCccHHHHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCV-DFQGQHFQLLPFGSGRRICPGISMAMRTLELAL 158 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l 158 (202)
|++++||.||+|+.|.++.+.+|+||++|+||++|+|+||++++.. .....+..|+|||.|+|.|+|++||++++++++
T Consensus 414 d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~l 493 (543)
T PLN02971 414 DTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMML 493 (543)
T ss_pred CeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999975221 111235689999999999999999999999999
Q ss_pred HHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 159 ANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
+.|+++|+|+++++. ..++.....+ +.....++++.+++|
T Consensus 494 a~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~ 533 (543)
T PLN02971 494 ARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVMVGELR 533 (543)
T ss_pred HHHHHhCEEEeCCCC--CCcchhhhcC-cccccccceeeeeec
Confidence 999999999987654 2455555555 553344788888877
No 6
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=3.3e-49 Score=336.54 Aligned_cols=199 Identities=32% Similarity=0.589 Sum_probs=172.0
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE 80 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~ 80 (202)
+++||+|||+.+++|++|+|++||++|+||++|++++.+.++.++.+++.++|||+|||+|++|++|+++ ..+|.+.+|
T Consensus 301 ~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d 380 (503)
T PLN02394 301 INVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLED 380 (503)
T ss_pred HHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCC
Confidence 5689999999999999999999999999999999999887667889999999999999999999999999 457899999
Q ss_pred eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCC-CcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623 81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCV-DFQGQHFQLLPFGSGRRICPGISMAMRTLELALA 159 (202)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~ 159 (202)
++++||.||+||.|.++.+.+|+||++|++|++|+||||++++.. .......+|+|||.|+|+|+|++||.+|+++++|
T Consensus 381 ~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la 460 (503)
T PLN02394 381 AKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLG 460 (503)
T ss_pred cccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975321 1122356899999999999999999999999999
Q ss_pred HHHhhceeecCCCCCCCCccccccc-ceeecccCCeEEEEeecC
Q 035623 160 NLLYKFDWKMPEGMKNEDLDYDILP-GVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~ 202 (202)
.++++|++++.++. ..++..... ++....+.+.++++.+|+
T Consensus 461 ~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 461 RLVQNFELLPPPGQ--SKIDVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred HHHHHceeEeCCCC--CcCccccccCceeeccCCCceEEeecCC
Confidence 99999999987654 124444334 345533448888888885
No 7
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=2.5e-48 Score=330.66 Aligned_cols=190 Identities=31% Similarity=0.596 Sum_probs=165.9
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC 81 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~ 81 (202)
+++||+|||+++++|++++|+.||++|+|+++|+++++ +.+++.+||||++|++|+||++|+++...|.+.+|.
T Consensus 309 ~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~ 382 (500)
T PLN02169 309 LVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPD 382 (500)
T ss_pred HHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCC
Confidence 67899999999999999999999999999999999873 678999999999999999999999997778777765
Q ss_pred ee-cCeEeCCCcEEEecccccCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623 82 VV-DGHKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA 159 (202)
Q Consensus 82 ~~-~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~ 159 (202)
++ +|+.||+|+.|.++.+.+||||++| +||++|+|+||++++.......++.|+|||+|+|+|+|++||.+|++++++
T Consensus 383 ~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la 462 (500)
T PLN02169 383 VLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVAL 462 (500)
T ss_pred CccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 54 9999999999999999999999999 899999999999753221112367899999999999999999999999999
Q ss_pred HHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 160 NLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
.|+++|++++.++. .+ ....++++.++.++.+++++|+
T Consensus 463 ~ll~~f~~~~~~~~---~~--~~~~~~~l~~~~gl~l~l~~~~ 500 (500)
T PLN02169 463 EIIKNYDFKVIEGH---KI--EAIPSILLRMKHGLKVTVTKKI 500 (500)
T ss_pred HHHHHCEEEEcCCC---Cc--ccccceEEecCCCEEEEEEeCC
Confidence 99999999987543 22 2234566778889999999986
No 8
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=5.4e-48 Score=329.01 Aligned_cols=199 Identities=48% Similarity=0.906 Sum_probs=171.6
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC--CCCChhhhccChhHHHHHHHhhcCCCCCCC-Ccccc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNK--GFVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRST 77 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~-~~r~~ 77 (202)
++++||+|||+.+++|++++|++||++|+|+++|++++++.. ..++.+++.++||++||++|++|++|+++. ++|.+
T Consensus 296 ~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~ 375 (502)
T PLN02966 296 DIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRAC 375 (502)
T ss_pred HHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCccc
Confidence 468999999999999999999999999999999999998643 357899999999999999999999999994 68999
Q ss_pred CcceeecCeEeCCCcEEEecccccCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHH
Q 035623 78 TEECVVDGHKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLEL 156 (202)
Q Consensus 78 ~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~ 156 (202)
.+|++++|+.||+||.|.++.+.+||||++| |+|++|+|+||++++. ........|+|||.|+|+|+|++||.+++++
T Consensus 376 ~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~-~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~ 454 (502)
T PLN02966 376 IQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEV-DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEV 454 (502)
T ss_pred CCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCC-CcCCCcCCccCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999997522 2223456899999999999999999999999
Q ss_pred HHHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEee
Q 035623 157 ALANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATK 200 (202)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (202)
++|.|+++|++++.++...+.++.+...++...+..++.++.++
T Consensus 455 ~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (502)
T PLN02966 455 PYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEK 498 (502)
T ss_pred HHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEe
Confidence 99999999999988765444455555556666444466655543
No 9
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=1e-47 Score=328.41 Aligned_cols=201 Identities=40% Similarity=0.774 Sum_probs=175.6
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE 80 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~ 80 (202)
+++||+|||+.+++|++++|++||++++|+++|++++++..+.++.+++.++|||++|++|++|++|+++ .++|.+.+|
T Consensus 305 ~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d 384 (517)
T PLN02687 305 LFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEE 384 (517)
T ss_pred HhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCC
Confidence 6789999999999999999999999999999999999877777899999999999999999999999999 579999999
Q ss_pred eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCC---cCCCccceeccCCCCCCCccHHHHHHHHHHH
Q 035623 81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVD---FQGQHFQLLPFGSGRRICPGISMAMRTLELA 157 (202)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~---~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~ 157 (202)
++++|+.||+||.|.++.+.+|+||++|+||++|+|+||++.+... .......|+|||.|+|.|+|++||.++++++
T Consensus 385 ~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~ 464 (517)
T PLN02687 385 CEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLL 464 (517)
T ss_pred eeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999753211 1123457999999999999999999999999
Q ss_pred HHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 158 LANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
++.|+++|++++.++...++++.....+....+..++.+++++|+
T Consensus 465 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 465 TATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL 509 (517)
T ss_pred HHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence 999999999998766432334443344555566678999998884
No 10
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=6.8e-48 Score=326.93 Aligned_cols=190 Identities=31% Similarity=0.546 Sum_probs=167.9
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE 80 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~ 80 (202)
+++||+|||+.+++|++++|++||++|+||++|++++++..+.++.+++.+|||+++|++|++|++|+++ .++|.+.+|
T Consensus 291 ~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d 370 (482)
T PTZ00404 291 FFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSND 370 (482)
T ss_pred HHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCC
Confidence 6799999999999999999999999999999999999887666889999999999999999999999999 478999999
Q ss_pred eee-cCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623 81 CVV-DGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA 159 (202)
Q Consensus 81 ~~~-~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~ 159 (202)
+++ +|+.||+|+.|.++.+.+|+||++|+||++|+|+||++.. .+..|+|||.|+|.|+|++||.+|++++++
T Consensus 371 ~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la 444 (482)
T PTZ00404 371 IIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD------SNDAFMPFSIGPRNCVGQQFAQDELYLAFS 444 (482)
T ss_pred EEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC------CCCceeccCCCCCCCccHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999998641 345899999999999999999999999999
Q ss_pred HHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 160 NLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
.++++|+++.+++. +.......+.+..+ .++.+.+++|
T Consensus 445 ~ll~~f~~~~~~~~---~~~~~~~~~~~~~~-~~~~v~~~~R 482 (482)
T PTZ00404 445 NIILNFKLKSIDGK---KIDETEEYGLTLKP-NKFKVLLEKR 482 (482)
T ss_pred HHHHhcEEecCCCC---CCCcccccceeecC-CCceeeeecC
Confidence 99999999986543 22222233455553 3678888776
No 11
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=1e-47 Score=326.21 Aligned_cols=195 Identities=32% Similarity=0.572 Sum_probs=172.2
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCC-CChhhhccChhHHHHHHHhhcCCCCCCCCccccCcc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGF-VDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEE 80 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~ 80 (202)
|+|||+|||+.+++|+++.|+.||++|+|+++|+.++++.... .+....++|+|+++||+||||++|+++.+.|.+.+|
T Consensus 299 f~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d 378 (497)
T KOG0157|consen 299 FMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKD 378 (497)
T ss_pred heeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCC
Confidence 7899999999999999999999999999999999999874432 233334469999999999999999999999999999
Q ss_pred eee-cCeEeCCCcEEEecccccCCCCCCCC-CCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHH
Q 035623 81 CVV-DGHKIEAKTLAYVNTLAIGRDSEVWD-KPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELAL 158 (202)
Q Consensus 81 ~~~-~~~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l 158 (202)
+.+ +|+.||+|+.|.++.+.+|||+.+|+ ||++|||+||+++.... ..++++|+|||+|+|.|+|++||++||++++
T Consensus 379 ~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~-~~~~~~fipFsaGpR~CiG~~fA~lemKv~l 457 (497)
T KOG0157|consen 379 VKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA-KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVL 457 (497)
T ss_pred eEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC-CCCCccccCCCCCcccchhHHHHHHHHHHHH
Confidence 999 48999999999999999999999997 99999999999763322 3456899999999999999999999999999
Q ss_pred HHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 159 ANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
++++++|+|++..+.. .......+..++.+++|++++|.
T Consensus 458 ~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~~~~r~ 496 (497)
T KOG0157|consen 458 AHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVKLRPRG 496 (497)
T ss_pred HHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEEEEEeCC
Confidence 9999999999877531 44456778888889999999884
No 12
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=1.6e-47 Score=326.04 Aligned_cols=198 Identities=43% Similarity=0.827 Sum_probs=173.7
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCC-CccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~-~~r~~~~ 79 (202)
++++||+|||+.+++|++++|++||++|+|+++|++++.+..+.++.+++.++||+++|++|++|++|+++. ++|.+.+
T Consensus 296 ~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 375 (504)
T PLN00110 296 NLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQ 375 (504)
T ss_pred hhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCC
Confidence 468999999999999999999999999999999999998876778999999999999999999999999994 7899999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcC--CCccceeccCCCCCCCccHHHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQ--GQHFQLLPFGSGRRICPGISMAMRTLELA 157 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~--~~~~~~~~Fg~G~~~C~G~~la~~~~~~~ 157 (202)
|++++||.||+||.|.++.+.+|+||++|+||++|+|+||++.+..... .....|+|||.|+|.|+|++||.+|++++
T Consensus 376 d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 455 (504)
T PLN00110 376 ACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYI 455 (504)
T ss_pred CeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999965321111 12357999999999999999999999999
Q ss_pred HHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 158 LANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
++.|+++|++++.++. +.+.....+.+..++.++++++++|
T Consensus 456 la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r 496 (504)
T PLN00110 456 LGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVTPR 496 (504)
T ss_pred HHHHHHhceeecCCCC---ccCcccccccccccCCCceEeeccC
Confidence 9999999999987653 2333334556666777888888887
No 13
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=1.9e-47 Score=326.54 Aligned_cols=201 Identities=39% Similarity=0.743 Sum_probs=174.7
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~ 79 (202)
++++||+|||+.+++|++++|++||++|+|+++|++++++..+.++.+++.++||++++++|++|++|+++ .++|.+.+
T Consensus 303 ~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~ 382 (514)
T PLN03112 303 DMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLR 382 (514)
T ss_pred HHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCC
Confidence 46899999999999999999999999999999999999887777899999999999999999999999999 46899999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCC--C-cCCCccceeccCCCCCCCccHHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCV--D-FQGQHFQLLPFGSGRRICPGISMAMRTLEL 156 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~--~-~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~ 156 (202)
|+.++|+.||+||.|.++.+.+|+||++|+||++|||+||+..+.. . .......|+|||.|+|+|+|++||.+++++
T Consensus 383 d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~ 462 (514)
T PLN03112 383 ATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLM 462 (514)
T ss_pred CeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998754211 1 112345799999999999999999999999
Q ss_pred HHHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 157 ALANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
+++.|+++|++++.++...+++......++..++..++.+.+.+|
T Consensus 463 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 507 (514)
T PLN03112 463 ALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPR 507 (514)
T ss_pred HHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecC
Confidence 999999999999876543334444444566666666888888887
No 14
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=2.2e-47 Score=326.46 Aligned_cols=198 Identities=32% Similarity=0.601 Sum_probs=169.6
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC-CCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNK-GFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTE 79 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~ 79 (202)
+++||+|||+.+++|++++|++||++|+|+++|++++++.. +.++.+++.+|||+++|++|++|++|+++ .++|.+.+
T Consensus 314 l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 393 (519)
T PLN00168 314 FLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAE 393 (519)
T ss_pred HHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCC
Confidence 67899999999999999999999999999999999998753 56899999999999999999999999998 56899999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCC----cCCCccceeccCCCCCCCccHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVD----FQGQHFQLLPFGSGRRICPGISMAMRTLE 155 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~----~~~~~~~~~~Fg~G~~~C~G~~la~~~~~ 155 (202)
|++++||.||+|+.|.++.+.+|+||++|++|++|+|+||++.+... .......|+|||.|+|+|+|++||.+|++
T Consensus 394 d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~ 473 (519)
T PLN00168 394 DMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLE 473 (519)
T ss_pred CccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999742211 11234579999999999999999999999
Q ss_pred HHHHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 156 LALANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 156 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
++++.|+++|++++.++. .++.....+++..++.++.+++++|.
T Consensus 474 ~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~R~ 517 (519)
T PLN00168 474 YFVANMVREFEWKEVPGD---EVDFAEKREFTTVMAKPLRARLVPRR 517 (519)
T ss_pred HHHHHHHHHccceeCCCC---cCChhhhceeEEeecCCcEEEEEecc
Confidence 999999999999987653 22322223444544557888888773
No 15
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=3.4e-47 Score=330.12 Aligned_cols=197 Identities=30% Similarity=0.520 Sum_probs=170.2
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEE 80 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~ 80 (202)
++++||+|||+.+++|++++|++||++|+||++|++++++. ..++++++++||||+|||+|+||++|+++.+.|.+.+|
T Consensus 398 ~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d 476 (633)
T PLN02738 398 TMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEN 476 (633)
T ss_pred HHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccC
Confidence 36789999999999999999999999999999999999874 56799999999999999999999999999777999999
Q ss_pred eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCC-CcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623 81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCV-DFQGQHFQLLPFGSGRRICPGISMAMRTLELALA 159 (202)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~ 159 (202)
++++||.||+||.|.++.+.+|+||++|+||++|+|+||+..+.. ........|+|||.|+|+|+|++||++|++++++
T Consensus 477 ~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA 556 (633)
T PLN02738 477 DMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATA 556 (633)
T ss_pred ceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999853211 1122456899999999999999999999999999
Q ss_pred HHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 160 NLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
.|+++|+|++.++. .++.. ..+.+..+..++.+++++|.
T Consensus 557 ~Llr~F~~el~~~~--~~~~~--~~~~~~~p~~~l~v~l~~R~ 595 (633)
T PLN02738 557 MLVRRFDFQLAPGA--PPVKM--TTGATIHTTEGLKMTVTRRT 595 (633)
T ss_pred HHHHhCeeEeCCCC--CCccc--ccceEEeeCCCcEEEEEECC
Confidence 99999999987654 22222 23445555567788887773
No 16
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-47 Score=314.96 Aligned_cols=194 Identities=31% Similarity=0.536 Sum_probs=176.5
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC-CCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKN-KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~ 79 (202)
||++||.|||+.++.|++|+|++||+.|++|++|+.++.+. +..++.+.+.++|||+|||+|++|+||.++...|+..+
T Consensus 323 dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~ 402 (519)
T KOG0159|consen 323 DLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPK 402 (519)
T ss_pred HHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccch
Confidence 68899999999999999999999999999999999999987 57789999999999999999999999999999999999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA 159 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~ 159 (202)
|..++||.||+||.|.+..+.+.+||.+|++|++|+|+||++.+. ...++..++|||.|+|+|+|++||.+||-++++
T Consensus 403 D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~--~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLa 480 (519)
T KOG0159|consen 403 DLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST--KTIHPFASLPFGFGPRMCLGRRIAELELHLLLA 480 (519)
T ss_pred hceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc--CCCCCceecCCCCCccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998742 455788999999999999999999999999999
Q ss_pred HHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 160 NLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
.++++|+++...+. ++++ ...+++.|+.++.+.+++|
T Consensus 481 rllr~f~V~~~~~~---pv~~--~~~~il~P~~~l~f~f~~r 517 (519)
T KOG0159|consen 481 RLLRNFKVEFLHEE---PVEY--VYRFILVPNRPLRFKFRPR 517 (519)
T ss_pred HHHHhcceeecCCC---Cccc--eeEEEEcCCCCcceeeeeC
Confidence 99999999987642 3333 3455667777888888876
No 17
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=3.5e-47 Score=323.16 Aligned_cols=173 Identities=23% Similarity=0.426 Sum_probs=156.1
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhc-----CCCCCChhhhccChhHHHHHHHhhcCCCCCCCCcc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAK-----NKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPR 75 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r 75 (202)
++++||+|||+.+++|++++|++||++|+|+++|++++++ ..+.++.+++.++||+++|++|++|++|+++.+.|
T Consensus 286 ~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R 365 (490)
T PLN02500 286 SLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHR 365 (490)
T ss_pred HHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeee
Confidence 3689999999999999999999999999999999999864 23357899999999999999999999999998789
Q ss_pred ccCcceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCc-----CCCccceeccCCCCCCCccHHHH
Q 035623 76 STTEECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDF-----QGQHFQLLPFGSGRRICPGISMA 150 (202)
Q Consensus 76 ~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~-----~~~~~~~~~Fg~G~~~C~G~~la 150 (202)
.+.+|++++||.||+||.|.++.+.+||||++|+||++|+|+||++++.... ...+..|+|||.|+|.|+|++||
T Consensus 366 ~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A 445 (490)
T PLN02500 366 KALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELA 445 (490)
T ss_pred EeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHH
Confidence 9999999999999999999999999999999999999999999997532111 12356899999999999999999
Q ss_pred HHHHHHHHHHHHhhceeecCCCC
Q 035623 151 MRTLELALANLLYKFDWKMPEGM 173 (202)
Q Consensus 151 ~~~~~~~l~~ll~~f~~~~~~~~ 173 (202)
.++++++++.++++|+|++.++.
T Consensus 446 ~~el~~~la~ll~~f~~~~~~~~ 468 (490)
T PLN02500 446 KLEMAVFIHHLVLNFNWELAEAD 468 (490)
T ss_pred HHHHHHHHHHHHhccEEEEcCCC
Confidence 99999999999999999987653
No 18
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=5.2e-47 Score=323.96 Aligned_cols=192 Identities=28% Similarity=0.494 Sum_probs=170.0
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEE 80 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~ 80 (202)
++++||+|||+.+++|++++|++||++|+|+++|++++++.. .++.+++.++|||+|||+|++|++|+++.++|.+.+|
T Consensus 323 ~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d 401 (516)
T PLN02290 323 TFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFED 401 (516)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCC
Confidence 367899999999999999999999999999999999998764 6899999999999999999999999999889999999
Q ss_pred eeecCeEeCCCcEEEecccccCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623 81 CVVDGHKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA 159 (202)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~ 159 (202)
++++|+.||+||.|.++.+.+|+||++| +||++|+|+||++.+ ......|+|||.|+|.|+|++||+++++++++
T Consensus 402 ~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~----~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la 477 (516)
T PLN02290 402 IKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP----FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILA 477 (516)
T ss_pred eeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC----CCCCCeEecCCCCCCCCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 799999999999541 11234799999999999999999999999999
Q ss_pred HHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 160 NLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
.|+++|++++.++.. .....+.+..|+.++.+++++|.
T Consensus 478 ~ll~~f~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~~~~ 515 (516)
T PLN02290 478 MLISKFSFTISDNYR-----HAPVVVLTIKPKYGVQVCLKPLN 515 (516)
T ss_pred HHHHhceEeeCCCcc-----cCccceeeecCCCCCeEEEEeCC
Confidence 999999999876431 11122456777778888888873
No 19
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.9e-47 Score=318.91 Aligned_cols=171 Identities=41% Similarity=0.716 Sum_probs=157.0
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE 80 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~ 80 (202)
+++||++||+.+++|++++|++||++|+||++|++++.+..+.++.+++.++|||+|||+|++|++|+++ .++|.+.+|
T Consensus 270 ~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d 349 (463)
T PF00067_consen 270 LLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATED 349 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5789999999999999999999999999999999999976667899999999999999999999999999 889999999
Q ss_pred eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623 81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN 160 (202)
Q Consensus 81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ 160 (202)
++++|+.||+|+.|.++.+.+|+||++|+||++|+|+||++.+. ........|+|||.|+|.|||++||.++++++++.
T Consensus 350 ~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ 428 (463)
T PF00067_consen 350 VTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG-ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAK 428 (463)
T ss_dssp EEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS-TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998743 22345678999999999999999999999999999
Q ss_pred HHhhceeecCCCC
Q 035623 161 LLYKFDWKMPEGM 173 (202)
Q Consensus 161 ll~~f~~~~~~~~ 173 (202)
||++||+++.++.
T Consensus 429 ll~~f~~~~~~~~ 441 (463)
T PF00067_consen 429 LLRRFDFELVPGS 441 (463)
T ss_dssp HHHHEEEEESTTS
T ss_pred HHHhCEEEECCCC
Confidence 9999999997654
No 20
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=4.3e-47 Score=324.47 Aligned_cols=196 Identities=31% Similarity=0.502 Sum_probs=166.3
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC--------------------CCCCChhhhccChhHHHHH
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKN--------------------KGFVDEDDLETLQYLKAVL 60 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~~~~~~~l~~~i 60 (202)
++++||+|||+.+++|++|+|++||++|+||++|++++... .+.++.+++.++|||+|||
T Consensus 299 ~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi 378 (516)
T PLN03195 299 NFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVI 378 (516)
T ss_pred HHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHH
Confidence 36789999999999999999999999999999999987642 2357899999999999999
Q ss_pred HHhhcCCCCCCCCccccCcceee-cCeEeCCCcEEEecccccCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCccceeccC
Q 035623 61 KETFRLQPPVPLIPRSTTEECVV-DGHKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFIGTDCVDFQGQHFQLLPFG 138 (202)
Q Consensus 61 ~E~lRl~~~~~~~~r~~~~~~~~-~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg 138 (202)
+|+||++|+++...|.+.+|.++ +|+.||+||.|.++.+.+|+||++| +||++|+|+||++++. .....+..|+|||
T Consensus 379 ~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~-~~~~~~~~~~pFG 457 (516)
T PLN03195 379 TETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGV-FQNASPFKFTAFQ 457 (516)
T ss_pred HHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCC-cCCCCCceEeccC
Confidence 99999999999777777777665 9999999999999999999999999 9999999999996421 1122445799999
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 139 SGRRICPGISMAMRTLELALANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 139 ~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
+|+|.|+|++||++|++++++.|+++|++++.++. +... ....+..++.++++++++|.
T Consensus 458 ~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 458 AGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---PVKY--RMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---ccee--eeeeEEecCCCEEEEEEeCC
Confidence 99999999999999999999999999999986543 2222 22334556678889888873
No 21
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.6e-46 Score=321.46 Aligned_cols=198 Identities=25% Similarity=0.519 Sum_probs=170.5
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCC-ccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLI-PRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~-~r~~~~ 79 (202)
++++||+|||+.+++|++++|+.||++|+|+++|++++++..+.++.+++.++||+++|++|++|++|+++.. +|.+.+
T Consensus 321 ~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~ 400 (534)
T PLN03018 321 EFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQ 400 (534)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCC
Confidence 3678999999999999999999999999999999999998777789999999999999999999999999954 799999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCc----CCCccceeccCCCCCCCccHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDF----QGQHFQLLPFGSGRRICPGISMAMRTLE 155 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~----~~~~~~~~~Fg~G~~~C~G~~la~~~~~ 155 (202)
|++++||.||+|+.|.++.+.+|+||++|++|++|+|+||++.+.... ...+..|+|||.|+|.|+|++||.++++
T Consensus 401 d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~ 480 (534)
T PLN03018 401 DTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMV 480 (534)
T ss_pred CeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999997532110 1234679999999999999999999999
Q ss_pred HHHHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 156 LALANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 156 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
+++++|+++|++++.++. .+++.....+.+..+ .++++++++|
T Consensus 481 ~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~~~R 523 (534)
T PLN03018 481 MMLARFLQGFNWKLHQDF--GPLSLEEDDASLLMA-KPLLLSVEPR 523 (534)
T ss_pred HHHHHHHHhceEEeCCCC--CCCCccccccceecC-CCeEEEEEec
Confidence 999999999999986643 233333233444444 4888888887
No 22
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=1.2e-46 Score=320.33 Aligned_cols=197 Identities=24% Similarity=0.383 Sum_probs=170.2
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC-CCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNK-GFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEE 80 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~ 80 (202)
+++||+|||+.+++|++|+|++||++++|+++|++++.+.. ..++.+++.+||||++||+|++|++|+++...|.+.+|
T Consensus 301 ~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d 380 (502)
T PLN02426 301 FLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAED 380 (502)
T ss_pred HHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccC
Confidence 67899999999999999999999999999999999987643 36799999999999999999999999999777999998
Q ss_pred eee-cCeEeCCCcEEEecccccCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHH
Q 035623 81 CVV-DGHKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELAL 158 (202)
Q Consensus 81 ~~~-~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l 158 (202)
.++ +|+.||+||.|.++.+.+|+||++| +||++|+||||++++. .....+..|+|||+|+|.|+|+++|.+|+++++
T Consensus 381 ~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~-~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~l 459 (502)
T PLN02426 381 DVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV-FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVA 459 (502)
T ss_pred CCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC-cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHH
Confidence 777 8999999999999999999999999 9999999999997421 112235679999999999999999999999999
Q ss_pred HHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 159 ANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
+.|+++|++++.++.. .. .....+.+..++.++++++++|+
T Consensus 460 a~ll~~f~~~~~~~~~-~~--~~~~~~~~~~~~~gl~v~~~~r~ 500 (502)
T PLN02426 460 VAVVRRFDIEVVGRSN-RA--PRFAPGLTATVRGGLPVRVRERV 500 (502)
T ss_pred HHHHHHceEEEecCCC-CC--CcccceeEEecCCCEEEEEEEcc
Confidence 9999999999864321 11 12234566777778899888874
No 23
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=4.1e-46 Score=314.90 Aligned_cols=194 Identities=32% Similarity=0.599 Sum_probs=169.5
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCC-CccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~-~~r~~~~ 79 (202)
++++||+|||+.+++|++++|++||++|+|+++|++++++... ++.+++.++||+++|++|++|++|+++. .+|.+.+
T Consensus 269 ~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~ 347 (466)
T PLN02655 269 EPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHE 347 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCC
Confidence 3678999999999999999999999999999999999987654 8999999999999999999999999995 5799999
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA 159 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~ 159 (202)
|++++|+.||+||.|+++.+.+|+|+++|++|++|+|+||++.+.. ......++|||+|+|.|||++||..+++++++
T Consensus 348 d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~ 425 (466)
T PLN02655 348 DTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE--SADMYKTMAFGAGKRVCAGSLQAMLIACMAIA 425 (466)
T ss_pred CcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc--cCCcccccCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999975211 12346899999999999999999999999999
Q ss_pred HHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 160 NLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
.||++|++++.++.. .. ....+++..++.++.+.+++|
T Consensus 426 ~ll~~f~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~r 463 (466)
T PLN02655 426 RLVQEFEWRLREGDE-EK---EDTVQLTTQKLHPLHAHLKPR 463 (466)
T ss_pred HHHHHeEEEeCCCCc-cc---cchhheeEeecCCcEEEEeec
Confidence 999999999876542 11 223455565666888877776
No 24
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=6e-46 Score=313.64 Aligned_cols=188 Identities=23% Similarity=0.408 Sum_probs=162.7
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC---CCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccC
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKN---KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTT 78 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~ 78 (202)
+++||+|||+.+++|++++|++||++|+|+++|++++.+. .+.++.+++.++||+++|++|++|++|+++.+.|.+.
T Consensus 272 ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~ 351 (463)
T PLN02774 272 ILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTT 351 (463)
T ss_pred HHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccC
Confidence 6789999999999999999999999999999999999753 3457899999999999999999999999997789999
Q ss_pred cceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHH
Q 035623 79 EECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELAL 158 (202)
Q Consensus 79 ~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l 158 (202)
+|++++|+.||+|+.|.++.+.+|+||++|+||++|+|+||++.+. .. ...|+|||+|+|.|||++||.+|+++++
T Consensus 352 ~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~---~~-~~~~lpFG~G~r~C~G~~~A~~e~~~~l 427 (463)
T PLN02774 352 QDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL---ES-HNYFFLFGGGTRLCPGKELGIVEISTFL 427 (463)
T ss_pred CCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc---CC-CccccCcCCCCCcCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999996521 11 2369999999999999999999999999
Q ss_pred HHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEee
Q 035623 159 ANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATK 200 (202)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (202)
+.|+++|++++.++.. ... .+ +..|+.++.+++++
T Consensus 428 a~Ll~~f~~~~~~~~~--~~~---~~--~~~p~~g~~~~~~~ 462 (463)
T PLN02774 428 HYFVTRYRWEEVGGDK--LMK---FP--RVEAPNGLHIRVSP 462 (463)
T ss_pred HHHHHhceEEECCCCc--ccc---CC--CCCCCCCceEEeee
Confidence 9999999999976532 111 11 22244567776653
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=9.8e-46 Score=311.51 Aligned_cols=188 Identities=22% Similarity=0.367 Sum_probs=165.3
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhc----CCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAK----NKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRS 76 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~ 76 (202)
++++||+|||+.+++|++++|++||++|+++++|++++.+ ....++.+++.++||++|||+|++|++|+++.++|.
T Consensus 258 ~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~ 337 (452)
T PLN03141 258 DMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRK 337 (452)
T ss_pred HHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCccee
Confidence 4688999999999999999999999999999999998763 234578889999999999999999999999888899
Q ss_pred cCcceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHH
Q 035623 77 TTEECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLEL 156 (202)
Q Consensus 77 ~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~ 156 (202)
+.+|++++||.||+|+.|.++.+.+|+|+++|+||++|+|+||++++ ..+..|+|||.|+|.|+|++||.+++++
T Consensus 338 ~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~~ 412 (452)
T PLN03141 338 AMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD-----MNNSSFTPFGGGQRLCPGLDLARLEASI 412 (452)
T ss_pred ecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCC-----CCCCCCCCCCCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999752 1345799999999999999999999999
Q ss_pred HHHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 157 ALANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
+++.|+++|+++..++. ... ..++.+..++.+.+++|
T Consensus 413 ~la~ll~~f~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~ 449 (452)
T PLN03141 413 FLHHLVTRFRWVAEEDT----IVN----FPTVRMKRKLPIWVTRI 449 (452)
T ss_pred HHHHHHhcCeeecCCCC----eee----cccccCCCCceEEEEeC
Confidence 99999999999976542 111 13555666778887776
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=5.3e-45 Score=309.74 Aligned_cols=195 Identities=31% Similarity=0.542 Sum_probs=165.7
Q ss_pred CeeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCc
Q 035623 1 DVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTE 79 (202)
Q Consensus 1 d~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~ 79 (202)
++++||+|||+.+++|++|+|++||++|+++++|++++++. ..++.+++.+||||+||++|++|++|+++ ..+|.+..
T Consensus 285 ~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~ 363 (489)
T PLN02936 285 SMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVE 363 (489)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccC
Confidence 36789999999999999999999999999999999999875 34788999999999999999999999988 55566677
Q ss_pred ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCC-cCCCccceeccCCCCCCCccHHHHHHHHHHHH
Q 035623 80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVD-FQGQHFQLLPFGSGRRICPGISMAMRTLELAL 158 (202)
Q Consensus 80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~-~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l 158 (202)
|+.++|+.||+|+.|.++.+.+|+||++|+||++|+|+||+..+... .......|+|||.|+|.|+|++||.+++++++
T Consensus 364 ~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~l 443 (489)
T PLN02936 364 DVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVAL 443 (489)
T ss_pred ccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999653211 11224579999999999999999999999999
Q ss_pred HHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 159 ANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
+.|+++|+++++++. ++.. ..++...++.++++++++|
T Consensus 444 a~ll~~f~~~~~~~~---~~~~--~~~~~~~~~~~~~v~~~~R 481 (489)
T PLN02936 444 AVLLQRLDLELVPDQ---DIVM--TTGATIHTTNGLYMTVSRR 481 (489)
T ss_pred HHHHHhCeEEecCCC---ccce--ecceEEeeCCCeEEEEEee
Confidence 999999999987653 2222 2234455556788888776
No 27
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=1.1e-44 Score=307.68 Aligned_cols=189 Identities=25% Similarity=0.354 Sum_probs=164.0
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC----CCCChhhhccChhHHHHHHHhhcCCCCCCCCcccc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNK----GFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRST 77 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~ 77 (202)
+++||+|||+.+++|++++|++||++|+|+++|++++++.. ..++.+++.++||++++|+|++|++|+++...|.+
T Consensus 295 ~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~ 374 (490)
T PLN02302 295 YLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREA 374 (490)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcc
Confidence 57899999999999999999999999999999999987642 12688999999999999999999999999778999
Q ss_pred CcceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHH
Q 035623 78 TEECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELA 157 (202)
Q Consensus 78 ~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~ 157 (202)
.+|++++|+.||+|+.|.++.+.+|+|+++|+||++|+|+||++.+ ..+..|+|||.|+|.|+|++||.++++++
T Consensus 375 ~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~-----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~ 449 (490)
T PLN02302 375 KTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT-----PKAGTFLPFGLGSRLCPGNDLAKLEISIF 449 (490)
T ss_pred cCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC-----CCCCCccCCCCCCcCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999642 23457999999999999999999999999
Q ss_pred HHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 158 LANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
++.++++|++++.++. . .+...+ ...|..++.+++++|
T Consensus 450 la~ll~~f~~~~~~~~--~--~~~~~~--~~~p~~~~~~~~~~~ 487 (490)
T PLN02302 450 LHHFLLGYRLERLNPG--C--KVMYLP--HPRPKDNCLARITKV 487 (490)
T ss_pred HHHHHhcCeeEEcCCC--C--cceeCC--CCCCCCCceEEEEec
Confidence 9999999999987532 1 222112 244555677777665
No 28
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-44 Score=292.06 Aligned_cols=197 Identities=28% Similarity=0.535 Sum_probs=175.7
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCC-CChhhhccChhHHHHHHHhhcCCCCCCCCccccCcc
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGF-VDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEE 80 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~ 80 (202)
++|||+.|++.+.+|++++|++||++++.+++|+.++++++.. ++.+.++++|.|++||+||||+++|.+.+.|.+.+|
T Consensus 281 ~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D 360 (486)
T KOG0684|consen 281 LLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHED 360 (486)
T ss_pred HHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccc
Confidence 4789999999999999999999999999999999999987654 899999999999999999999999999888999999
Q ss_pred eeecC----eEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCC-cCCC--ccceeccCCCCCCCccHHHHHHH
Q 035623 81 CVVDG----HKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVD-FQGQ--HFQLLPFGSGRRICPGISMAMRT 153 (202)
Q Consensus 81 ~~~~~----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~-~~~~--~~~~~~Fg~G~~~C~G~~la~~~ 153 (202)
.++.+ |.||+|..|.++...+|+||++|++|+.|+|+||++++..+ ..+. .+.|+|||+|.|.|||++||.++
T Consensus 361 ~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~e 440 (486)
T KOG0684|consen 361 LTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLE 440 (486)
T ss_pred eeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHH
Confidence 99965 99999999999999999999999999999999999875444 2223 33469999999999999999999
Q ss_pred HHHHHHHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623 154 LELALANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI 202 (202)
Q Consensus 154 ~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (202)
++.++..+|+.||+++.+++ ...+++... +..|..+++++-|.|.
T Consensus 441 Ik~~~~l~L~~fdleLid~~-~P~~d~s~~---v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 441 IKQFISLLLRHFDLELIDGP-FPEVDYSRM---VMQPEGDVRIRYKRRP 485 (486)
T ss_pred HHHHHHHHHHHcceeecCCC-CCCCCHHHh---hcCCCCCceEEEeecC
Confidence 99999999999999999873 245566443 6778889999999884
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=3e-44 Score=303.63 Aligned_cols=191 Identities=21% Similarity=0.338 Sum_probs=167.5
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhc---CCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccC
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAK---NKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTT 78 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~ 78 (202)
+++||+|||+.+++|++++|++||++++++++|++++.+ ..+.++.+++.++||++++++|++|++|+++.+.|.+.
T Consensus 275 l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~ 354 (472)
T PLN02987 275 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAM 354 (472)
T ss_pred HHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCC
Confidence 578999999999999999999999999999999999875 23457889999999999999999999999998889999
Q ss_pred cceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHH
Q 035623 79 EECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELAL 158 (202)
Q Consensus 79 ~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l 158 (202)
+|++++||.||+|+.|.++.+.+|+||++|++|++|||+||++.+.. ......|+|||.|+|.|+|++||.+|+++++
T Consensus 355 ~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~--~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l 432 (472)
T PLN02987 355 TDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT--TVPSNVFTPFGGGPRLCPGYELARVALSVFL 432 (472)
T ss_pred CCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC--CCCCcceECCCCCCcCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999975321 1234579999999999999999999999999
Q ss_pred HHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623 159 ANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF 201 (202)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (202)
+.|+++|++++.++. ++.+ ..+..|..++.+++++|
T Consensus 433 a~ll~~f~~~~~~~~---~~~~----~~~~~p~~~~~~~~~~r 468 (472)
T PLN02987 433 HRLVTRFSWVPAEQD---KLVF----FPTTRTQKRYPINVKRR 468 (472)
T ss_pred HHHHhceEEEECCCC---ceee----cccccCCCCceEEEEec
Confidence 999999999987643 2222 33566666788888877
No 30
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=1.2e-44 Score=305.63 Aligned_cols=187 Identities=22% Similarity=0.409 Sum_probs=163.0
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC---CCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccC
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKN---KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTT 78 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~ 78 (202)
+++||+|||+.+++|++++|++||++++|+++|++++.+. ...++.+++.+++|++|+++|++|++|+++...|.+.
T Consensus 272 ~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~ 351 (463)
T PLN02196 272 VIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAV 351 (463)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeec
Confidence 6789999999999999999999999999999999988753 3457899999999999999999999999997779999
Q ss_pred cceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHH
Q 035623 79 EECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELAL 158 (202)
Q Consensus 79 ~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l 158 (202)
+|+.++||.||+|+.|.++.+.+|+||++|++|++|+|+||++.. .+..|+|||.|+|.|+|+++|++++++++
T Consensus 352 ~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~------~~~~~lpFG~G~r~C~G~~~A~~e~~~~l 425 (463)
T PLN02196 352 EDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP------KPNTFMPFGNGTHSCPGNELAKLEISVLI 425 (463)
T ss_pred cccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC------CCCcccCcCCCCCCCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999631 24589999999999999999999999999
Q ss_pred HHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEee
Q 035623 159 ANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATK 200 (202)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (202)
+.|+++|++++.++. ....+ ..+..|+..+.++++.
T Consensus 426 a~ll~~f~~~~~~~~--~~~~~----~~~~~p~~~~~~~~~~ 461 (463)
T PLN02196 426 HHLTTKYRWSIVGTS--NGIQY----GPFALPQNGLPIALSR 461 (463)
T ss_pred HHHHHhcEEEEcCCC--CceEE----cccccCCCCceEEEec
Confidence 999999999987643 12222 2223355566666554
No 31
>PLN02648 allene oxide synthase
Probab=100.00 E-value=7.4e-38 Score=264.28 Aligned_cols=165 Identities=24% Similarity=0.439 Sum_probs=143.9
Q ss_pred ecchhHHHHHHHHHHHHhhChH-HHHHHHHHHHHhhcC-CCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCccee
Q 035623 5 AGTDTSVATLVWSMTNLMRNPA-TMKKAQEEVRSVAKN-KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEECV 82 (202)
Q Consensus 5 ag~~tt~~~~~~~~~~l~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~~ 82 (202)
+++++++.+++|++|+|++||+ ++++|++|++++.+. .+.++.+++.+|||+++|++|++|++|+++...|.+.+|++
T Consensus 283 ~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~ 362 (480)
T PLN02648 283 NAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFV 362 (480)
T ss_pred HhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEE
Confidence 3466666789999999999995 999999999999863 44689999999999999999999999999987888999999
Q ss_pred ec----CeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceecc---------CCCCCCCccHHH
Q 035623 83 VD----GHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPF---------GSGRRICPGISM 149 (202)
Q Consensus 83 ~~----~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~F---------g~G~~~C~G~~l 149 (202)
++ ||.||+|+.|.++.+.+|+||++|+||++|||+||++.+.. ....+++| |.|+|.|+|++|
T Consensus 363 l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~ 438 (480)
T PLN02648 363 IESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE----KLLKYVFWSNGRETESPTVGNKQCAGKDF 438 (480)
T ss_pred EecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc----ccccccccCCCcccCCCCCCCccCccHHH
Confidence 96 79999999999999999999999999999999999864221 11234444 667799999999
Q ss_pred HHHHHHHHHHHHHhhce-eecCCCC
Q 035623 150 AMRTLELALANLLYKFD-WKMPEGM 173 (202)
Q Consensus 150 a~~~~~~~l~~ll~~f~-~~~~~~~ 173 (202)
|++|++++++.|+++|+ +++.++.
T Consensus 439 A~~e~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 439 VVLVARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred HHHHHHHHHHHHHHHhCEEeecCCc
Confidence 99999999999999998 9987765
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-38 Score=262.25 Aligned_cols=144 Identities=40% Similarity=0.663 Sum_probs=136.6
Q ss_pred eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623 2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC 81 (202)
Q Consensus 2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~ 81 (202)
+++||+|||+++++|++|.|++||+.++++++|.+. +|++++++|+||++|+++...|.+++|+
T Consensus 244 ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~ 307 (411)
T COG2124 244 LLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPLARRVATEDV 307 (411)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhccceeccCCE
Confidence 578999999999999999999999999999998754 7899999999999999999999999999
Q ss_pred eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623 82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL 161 (202)
Q Consensus 82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l 161 (202)
+++|+.||+|+.|.+..+.+||||++|++|++|||+||. ..|+|||+|+|.|+|..||++|++++++.+
T Consensus 308 ~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~l 376 (411)
T COG2124 308 ELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-----------NAHLPFGGGPHRCLGAALARLELKVALAEL 376 (411)
T ss_pred eeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-----------CCCcCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999986 368999999999999999999999999999
Q ss_pred HhhceeecCCC
Q 035623 162 LYKFDWKMPEG 172 (202)
Q Consensus 162 l~~f~~~~~~~ 172 (202)
+++|++....+
T Consensus 377 l~r~~~~~~~~ 387 (411)
T COG2124 377 LRRFPLLLLAE 387 (411)
T ss_pred HHhCchhhcCC
Confidence 99999887654
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=56.05 E-value=9.3 Score=22.79 Aligned_cols=8 Identities=38% Similarity=0.709 Sum_probs=6.4
Q ss_pred CCCCCCCC
Q 035623 115 IPERFIGT 122 (202)
Q Consensus 115 ~p~R~~~~ 122 (202)
||||||.-
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 78899875
No 34
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=45.17 E-value=21 Score=25.23 Aligned_cols=23 Identities=13% Similarity=0.291 Sum_probs=17.1
Q ss_pred CCCccHHHHHHHHHHHHHHHHhh
Q 035623 142 RICPGISMAMRTLELALANLLYK 164 (202)
Q Consensus 142 ~~C~G~~la~~~~~~~l~~ll~~ 164 (202)
-.|.|+.||...+-.++.+|+..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 47999999999999999999875
No 35
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=43.55 E-value=27 Score=20.66 Aligned_cols=23 Identities=26% Similarity=0.315 Sum_probs=17.7
Q ss_pred HHHHHHHhhChHHHHHHHHHHHH
Q 035623 15 VWSMTNLMRNPATMKKAQEEVRS 37 (202)
Q Consensus 15 ~~~~~~l~~~p~~~~~l~~Ei~~ 37 (202)
.-.+.||.+||++.++|.+.=..
T Consensus 3 Q~iV~YLv~nPevl~kl~~g~as 25 (57)
T PF05952_consen 3 QEIVNYLVQNPEVLEKLKEGEAS 25 (57)
T ss_pred HHHHHHHHHChHHHHHHHcCCee
Confidence 34678999999999999865333
No 36
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=40.48 E-value=9.8 Score=28.01 Aligned_cols=36 Identities=31% Similarity=0.591 Sum_probs=25.5
Q ss_pred CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHH
Q 035623 112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGIS 148 (202)
Q Consensus 112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~ 148 (202)
.+|||++|-.- --..+.+....+-|..|+-.|-|..
T Consensus 35 aeYnP~qFpGl-v~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 35 AEYNPEQFPGL-VYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred CccCHhHCCee-EEEecCCcceEEEEecCcEEEeccC
Confidence 37899998532 1122335568899999999999965
No 37
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=39.47 E-value=28 Score=26.36 Aligned_cols=44 Identities=18% Similarity=0.137 Sum_probs=31.6
Q ss_pred cChhHHHHHHHhhcCCCCCCCCccccCcceeecCeEeCCCcEEEe
Q 035623 52 TLQYLKAVLKETFRLQPPVPLIPRSTTEECVVDGHKIEAKTLAYV 96 (202)
Q Consensus 52 ~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~~~~~~~ip~g~~v~~ 96 (202)
.-..+.|||.|..-+.. ...+.=...+|+.++|..||+||.++.
T Consensus 51 ~~n~I~A~V~~~qtv~~-Gs~vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 51 EKNTIRAVVDGTQTVVD-GSRVRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCCeEEEEEecceEEeC-CCEEEEEEcCceEECCEEeCCCCEEEE
Confidence 34566788888876644 233333456889999999999998876
No 38
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=38.61 E-value=50 Score=23.65 Aligned_cols=41 Identities=17% Similarity=0.462 Sum_probs=27.8
Q ss_pred ccCcceeecCeEeCCCcEEEeccc-------ccCCCCCCCCCCCCCCCC
Q 035623 76 STTEECVVDGHKIEAKTLAYVNTL-------AIGRDSEVWDKPDEFIPE 117 (202)
Q Consensus 76 ~~~~~~~~~~~~ip~g~~v~~~~~-------~~~~d~~~~~~p~~f~p~ 117 (202)
...+|+.++|..||+|+.-++... .++.+...|.. ..|||+
T Consensus 51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~ 98 (145)
T PF11138_consen 51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS 98 (145)
T ss_pred EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence 446789999999999988665432 23566667755 345544
No 39
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=36.06 E-value=25 Score=22.66 Aligned_cols=20 Identities=20% Similarity=0.499 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhhceeecCC
Q 035623 152 RTLELALANLLYKFDWKMPE 171 (202)
Q Consensus 152 ~~~~~~l~~ll~~f~~~~~~ 171 (202)
.-|+-++..+|+=|||.+.+
T Consensus 60 ~~IrdAVsqVLkGYDWtLVP 79 (84)
T PF12444_consen 60 VCIRDAVSQVLKGYDWTLVP 79 (84)
T ss_pred HHHHHHHHHHhccCCceeee
Confidence 34788899999999999875
No 40
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=35.21 E-value=7.9 Score=32.63 Aligned_cols=20 Identities=20% Similarity=0.102 Sum_probs=15.5
Q ss_pred CcceeecCeEeCCCcEEEec
Q 035623 78 TEECVVDGHKIEAKTLAYVN 97 (202)
Q Consensus 78 ~~~~~~~~~~ip~g~~v~~~ 97 (202)
.+|+.++|..||+||.++..
T Consensus 279 le~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 279 LEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred cCceeeCCEEecCCCEEEEE
Confidence 45666788999999987754
No 41
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=34.99 E-value=38 Score=25.00 Aligned_cols=55 Identities=25% Similarity=0.378 Sum_probs=33.2
Q ss_pred CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCcc---HHHHHHHHHHHHHHHHhhceee
Q 035623 112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPG---ISMAMRTLELALANLLYKFDWK 168 (202)
Q Consensus 112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G---~~la~~~~~~~l~~ll~~f~~~ 168 (202)
-+|+|+||-.- --....+....+-|+.|+=.|-| ..=|...++.+ +.+|+++.+.
T Consensus 29 ~~YePe~fpgl-i~R~~~P~~t~lIf~sGKivitGaks~~~~~~a~~~~-~~~L~~~g~~ 86 (174)
T cd00652 29 AEYNPKRFPGV-IMRLREPKTTALIFSSGKMVITGAKSEEDAKLAARKY-ARILQKLGFP 86 (174)
T ss_pred cEECCCccceE-EEEcCCCcEEEEEECCCEEEEEecCCHHHHHHHHHHH-HHHHHHcCCC
Confidence 47899988532 11122355688999999999998 33344444333 3445555544
No 42
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=32.87 E-value=44 Score=23.18 Aligned_cols=22 Identities=32% Similarity=0.703 Sum_probs=17.3
Q ss_pred CCCccHHHHHHHHHHHHHHHHh
Q 035623 142 RICPGISMAMRTLELALANLLY 163 (202)
Q Consensus 142 ~~C~G~~la~~~~~~~l~~ll~ 163 (202)
|.|||.-++..+...++..|-.
T Consensus 5 H~Cpgl~~G~r~~~~a~~~l~~ 26 (131)
T PF02663_consen 5 HLCPGLALGYRMAKYALEELGI 26 (131)
T ss_dssp S--HHHHHHHHHHHHHHHHHTS
T ss_pred CcCccHHHHHHHHHHHHHHcCC
Confidence 8999999999999988887744
No 43
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=32.43 E-value=14 Score=27.27 Aligned_cols=35 Identities=29% Similarity=0.640 Sum_probs=24.7
Q ss_pred CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccH
Q 035623 112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGI 147 (202)
Q Consensus 112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~ 147 (202)
-+|+|+||-.. --....+....+-|+.|+=.|-|-
T Consensus 29 ~eY~P~~fpgl-i~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 29 AEYNPDQFPGL-VYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred cEECCCcCcEE-EEEccCCcEEEEEECCCeEEEEcc
Confidence 47999998532 112233556889999999999976
No 44
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=32.16 E-value=21 Score=20.79 Aligned_cols=10 Identities=50% Similarity=1.059 Sum_probs=8.4
Q ss_pred eccCCCCCCC
Q 035623 135 LPFGSGRRIC 144 (202)
Q Consensus 135 ~~Fg~G~~~C 144 (202)
-+||.|.|.|
T Consensus 12 ~kfg~GsrsC 21 (56)
T KOG3506|consen 12 RKFGQGSRSC 21 (56)
T ss_pred cccCCCCcce
Confidence 3799999887
No 45
>PRK00394 transcription factor; Reviewed
Probab=31.98 E-value=46 Score=24.68 Aligned_cols=34 Identities=32% Similarity=0.673 Sum_probs=24.1
Q ss_pred CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCcc
Q 035623 112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPG 146 (202)
Q Consensus 112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G 146 (202)
-+|+|+||-.- --....+....+-|+.|+=.|-|
T Consensus 28 ~eYePe~fpgl-i~Rl~~Pk~t~lIf~sGKiv~tG 61 (179)
T PRK00394 28 AEYNPEQFPGL-VYRLEDPKIAALIFRSGKVVCTG 61 (179)
T ss_pred ceeCcccCceE-EEEecCCceEEEEEcCCcEEEEc
Confidence 47999998532 11223345688999999999988
No 46
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=31.68 E-value=79 Score=20.64 Aligned_cols=27 Identities=22% Similarity=0.396 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhChHHHHHHHHHHHHhh
Q 035623 13 TLVWSMTNLMRNPATMKKAQEEVRSVA 39 (202)
Q Consensus 13 ~~~~~~~~l~~~p~~~~~l~~Ei~~~~ 39 (202)
++.|.++..-.+|+-.+.|++||+++-
T Consensus 55 ~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 55 TLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 455666666678999999999998874
No 47
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=25.69 E-value=1e+02 Score=15.61 Aligned_cols=15 Identities=13% Similarity=0.381 Sum_probs=11.5
Q ss_pred ChHHHHHHHHHHHHh
Q 035623 24 NPATMKKAQEEVRSV 38 (202)
Q Consensus 24 ~p~~~~~l~~Ei~~~ 38 (202)
.|.+..+||+|+.+.
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 578889999998764
No 48
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=24.22 E-value=54 Score=22.73 Aligned_cols=22 Identities=18% Similarity=0.154 Sum_probs=17.7
Q ss_pred ccCcceeecCeEeCCCcEEEec
Q 035623 76 STTEECVVDGHKIEAKTLAYVN 97 (202)
Q Consensus 76 ~~~~~~~~~~~~ip~g~~v~~~ 97 (202)
.++.|..++|-.||+|+.+..-
T Consensus 72 I~~~d~~~~g~~i~~GtWv~~~ 93 (122)
T PF14550_consen 72 IAPEDMEIGGETIPKGTWVVGV 93 (122)
T ss_pred ecCCCcccCCeeecceEEEEEE
Confidence 4566888899999999998653
No 49
>PF09388 SpoOE-like: Spo0E like sporulation regulatory protein; InterPro: IPR018540 Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure []. ; PDB: 2BZB_B 2C0S_A.
Probab=23.96 E-value=1.4e+02 Score=16.41 Aligned_cols=38 Identities=26% Similarity=0.442 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhc
Q 035623 28 MKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFR 65 (202)
Q Consensus 28 ~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lR 65 (202)
.+.+|+++.......+..+.+-+.-.--|+..+.+-+|
T Consensus 6 Ie~~R~~L~~~~~~~~l~~~~vl~~Sq~LD~lI~~y~~ 43 (45)
T PF09388_consen 6 IEELRQELNELAEKKGLTDPEVLELSQELDKLINEYQK 43 (45)
T ss_dssp HHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhh
Confidence 46777888777766666666666666777888777665
No 50
>PF13993 YccJ: YccJ-like protein
Probab=23.59 E-value=71 Score=19.16 Aligned_cols=30 Identities=20% Similarity=0.177 Sum_probs=22.1
Q ss_pred ecchhHHHHHHHHHHHHhhChH-HHHHHHHH
Q 035623 5 AGTDTSVATLVWSMTNLMRNPA-TMKKAQEE 34 (202)
Q Consensus 5 ag~~tt~~~~~~~~~~l~~~p~-~~~~l~~E 34 (202)
|..-.|+.-++-++++|+.+.+ +.++|-+|
T Consensus 9 A~~ReTS~EIAeAIFElA~~dE~lAekIWee 39 (69)
T PF13993_consen 9 ANVRETSIEIAEAIFELANNDEVLAEKIWEE 39 (69)
T ss_pred HHHhcCCHHHHHHHHHHhcccHHHHHHHHHc
Confidence 4455677778899999999765 55677665
No 51
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=23.56 E-value=51 Score=25.21 Aligned_cols=21 Identities=29% Similarity=0.423 Sum_probs=17.7
Q ss_pred ccccCCCCCCCCCCCCCCCCC
Q 035623 98 TLAIGRDSEVWDKPDEFIPER 118 (202)
Q Consensus 98 ~~~~~~d~~~~~~p~~f~p~R 118 (202)
.+.-+.|+..|.|.+.|.|.|
T Consensus 191 W~~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 191 WWPDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCCCCCcccccCccccCCCC
Confidence 344588999999999999988
No 52
>PRK06789 flagellar motor switch protein; Validated
Probab=22.88 E-value=1.3e+02 Score=18.84 Aligned_cols=39 Identities=10% Similarity=0.188 Sum_probs=29.7
Q ss_pred HHHHhhcCCCCCC-CCccccCcc--eeecCeEeCCCcEEEec
Q 035623 59 VLKETFRLQPPVP-LIPRSTTEE--CVVDGHKIEAKTLAYVN 97 (202)
Q Consensus 59 ~i~E~lRl~~~~~-~~~r~~~~~--~~~~~~~ip~g~~v~~~ 97 (202)
-++|.+.+.+..- .+-+.+.++ +.++|..+-+|..|.++
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~ 62 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN 62 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence 4678888888665 666777665 45589999999988875
No 53
>PLN00062 TATA-box-binding protein; Provisional
Probab=21.32 E-value=29 Score=25.79 Aligned_cols=54 Identities=24% Similarity=0.463 Sum_probs=31.8
Q ss_pred CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccH-HH--HHHHHHHHHHHHHhhcee
Q 035623 112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGI-SM--AMRTLELALANLLYKFDW 167 (202)
Q Consensus 112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~-~l--a~~~~~~~l~~ll~~f~~ 167 (202)
-+|+|++|-.- --....+....+-|+.|+=.|-|- .. |...++. ++.+|++..+
T Consensus 29 ~eYePe~fpgl-i~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~-~~~~L~~lg~ 85 (179)
T PLN00062 29 AEYNPKRFAAV-IMRIREPKTTALIFASGKMVCTGAKSEHDSKLAARK-YARIIQKLGF 85 (179)
T ss_pred CEECCccCcEE-EEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHH-HHHHHHHcCC
Confidence 57999998532 111223455789999999999984 22 2222332 3345555554
No 54
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=20.25 E-value=2.4e+02 Score=17.85 Aligned_cols=33 Identities=24% Similarity=0.190 Sum_probs=26.4
Q ss_pred chhHHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 035623 7 TDTSVATLVWSMTNLMRNPATMKKAQEEVRSVA 39 (202)
Q Consensus 7 ~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~ 39 (202)
+..++....-.+.+-++||+..+++.+.+..-+
T Consensus 46 y~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 46 YGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred cCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 455667777888889999999999998887654
Done!