Query         035623
Match_columns 202
No_of_seqs    135 out of 1863
Neff          9.6 
Searched_HMMs 13730
Date          Mon Mar 25 07:19:35 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035623.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035623hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1tqna_ a.104.1.1 (A:) Mammali 100.0 1.6E-49 1.2E-53  330.0  16.2  195    2-201   275-469 (472)
  2 d3czha1 a.104.1.1 (A:40-502) V 100.0 2.3E-49 1.7E-53  326.9  15.9  195    2-202   268-463 (463)
  3 d1r9oa_ a.104.1.1 (A:) Mammali 100.0 1.4E-48   1E-52  323.4  16.5  195    2-201   269-465 (467)
  4 d2ciba1 a.104.1.1 (A:5-449) Cy 100.0 8.6E-49 6.3E-53  324.6  13.6  197    2-202   249-445 (445)
  5 d1po5a_ a.104.1.1 (A:) Mammali 100.0 2.5E-48 1.8E-52  322.3  16.1  195    2-201   268-464 (465)
  6 d1izoa_ a.104.1.1 (A:) Cytochr 100.0 1.4E-44   1E-48  297.1  12.7  172    3-201   235-410 (411)
  7 d2ij2a1 a.104.1.1 (A:3-455) Cy 100.0 1.8E-44 1.3E-48  299.3  11.9  189    2-201   259-449 (453)
  8 d1n97a_ a.104.1.1 (A:) Cyp175a 100.0 1.4E-40   1E-44  271.4   9.1  167    2-199   218-384 (385)
  9 d1n40a_ a.104.1.1 (A:) Cyp121  100.0   2E-37 1.5E-41  253.9  12.7  143    2-172   229-373 (395)
 10 d1gwia_ a.104.1.1 (A:) Cyp154c 100.0   1E-37 7.6E-42  255.5   8.4  143    2-172   232-377 (403)
 11 d1cpta_ a.104.1.1 (A:) Cytochr 100.0 3.8E-36 2.8E-40  246.2  13.3  142    2-172   264-406 (428)
 12 d1z8oa1 a.104.1.1 (A:3-404) Cy 100.0   4E-36 2.9E-40  245.5  12.3  143    2-173   236-379 (402)
 13 d1jfba_ a.104.1.1 (A:) Cytochr 100.0 6.5E-36 4.7E-40  244.1  12.2  144    2-172   232-377 (399)
 14 d1q5da_ a.104.1.1 (A:) Cytochr 100.0 1.1E-35 7.7E-40  242.3   9.9  142    2-172   236-379 (401)
 15 d1s1fa_ a.104.1.1 (A:) Cyp158a 100.0 4.5E-35 3.3E-39  239.1  12.2  143    2-173   231-376 (399)
 16 d1odoa_ a.104.1.1 (A:) Cyp154a 100.0 1.3E-34 9.3E-39  236.1  12.7  142    2-172   233-377 (401)
 17 d1ue8a_ a.104.1.1 (A:) Cyp119  100.0 8.7E-35 6.3E-39  235.6  10.5  138    2-171   207-344 (367)
 18 d1ueda_ a.104.1.1 (A:) p450 mo 100.0   2E-34 1.4E-38  236.1  11.6  142    2-172   239-382 (403)
 19 d1re9a_ a.104.1.1 (A:) Cytochr 100.0   4E-34 2.9E-38  234.6  13.0  142    2-173   235-377 (404)
 20 d1io7a_ a.104.1.1 (A:) Cyp119  100.0 1.6E-33 1.1E-37  227.8  10.7  140    2-172   206-346 (366)
 21 d1lfka_ a.104.1.1 (A:) p450 mo 100.0 3.1E-32 2.3E-36  222.1  10.0  149    2-181   229-379 (394)
 22 d1mp9a2 d.129.1.1 (A:97-197) T  65.2     3.1 0.00023   25.2   3.4   59  112-171    35-96  (101)
 23 d1aisa2 d.129.1.1 (A:93-181) T  63.0       2 0.00015   25.4   2.2   34  112-146    35-68  (89)
 24 d1qnaa1 d.129.1.1 (A:17-115) T  52.5     1.4 9.9E-05   26.8  -0.0   54  112-167    34-90  (99)
 25 d1aisa1 d.129.1.1 (A:1-92) TAT  47.2     2.5 0.00019   25.1   0.6   38  108-147    33-70  (92)
 26 d1mp9a1 d.129.1.1 (A:5-96) TAT  46.7     2.3 0.00017   25.4   0.3   35  112-147    36-70  (92)
 27 d1qnaa2 d.129.1.1 (A:116-198)   44.2     2.2 0.00016   24.8   0.0   36  112-148    26-61  (83)
 28 d2gvia1 d.81.3.1 (A:1-168) Unc  41.2     9.3 0.00068   25.2   2.9   20  142-161    18-37  (168)
 29 d1mo6a2 d.48.1.1 (A:270-329) R  37.3      20  0.0014   19.2   3.3   22   17-38     37-58  (60)
 30 d1xp8a2 d.48.1.1 (A:283-341) R  32.3      28   0.002   18.5   3.4   23   17-39     36-58  (59)
 31 d2glza1 d.81.3.1 (A:3-151) Fwd  28.8      19  0.0014   23.3   2.7   20  142-161    15-34  (149)
 32 d1u94a2 d.48.1.1 (A:269-328) R  27.7      39  0.0029   17.9   3.5   22   17-38     37-58  (60)
 33 d1nrja_ d.110.4.4 (A:) Srx dom  23.4     6.8  0.0005   25.1  -0.3   24  142-165    18-41  (155)
 34 d1ev0a_ d.71.1.1 (A:) Cell div  20.1      15  0.0011   19.6   0.7   19   23-41      4-22  (58)

No 1  
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-49  Score=330.02  Aligned_cols=195  Identities=28%  Similarity=0.471  Sum_probs=176.2

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      +++||++||+.+++|++++|++||++++++++|++++++.....+.+.+.++|||++|++|++|++|+.+.++|.+.+|+
T Consensus       275 l~~Ag~~tta~~l~~~l~~L~~~Pe~~~klr~Ei~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~~~~~~r~~~~d~  354 (472)
T d1tqna_         275 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDV  354 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHCCTTCCEEEECCSCE
T ss_pred             hhhcccccccccceeeccccccCccccccccceeheeccccccchHHHhhccccccceeeeccccCCcccccccccccCc
Confidence            57899999999999999999999999999999999999888888999999999999999999999999998899999999


Q ss_pred             eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623           82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL  161 (202)
Q Consensus        82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  161 (202)
                      .++||.||+|+.|.++.+.+|+||++|+||++|||+||++.+..  ...+..|+|||+|+|.|||++||.++++++++.|
T Consensus       355 ~~~g~~ipkGt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~--~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~la~l  432 (472)
T d1tqna_         355 EINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD--NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRV  432 (472)
T ss_dssp             EETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCGGGGSTTTGG--GCCTTTSCTTCCSTTSCTTHHHHHHHHHHHHHHH
T ss_pred             cccCceeCCCCEEEEechhhhcCchhCCCccccCccccCCCCcc--cCCCceecCCCCCCccChhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999987432  2345689999999999999999999999999999


Q ss_pred             HhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623          162 LYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF  201 (202)
Q Consensus       162 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  201 (202)
                      |++|||+++++.   +.+.....+.+..|+.++.+++++|
T Consensus       433 l~~f~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~R  469 (472)
T d1tqna_         433 LQNFSFKPCKET---QIPLKLSLGGLLQPEKPVVLKVESR  469 (472)
T ss_dssp             HTTEEEECCTTC---CSSCCBCSSSSCCBSSCCEEEEEET
T ss_pred             HHhCEEEeCCCC---CCCceeccceEEeeCCCEEEEEEEC
Confidence            999999987654   2334444555667777899999988


No 2  
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-49  Score=326.90  Aligned_cols=195  Identities=28%  Similarity=0.460  Sum_probs=174.3

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~   80 (202)
                      +++||++||+.+++|++++|++||++++||++|++.+.+..+.++.+++.+||||+||++|++|++|+++ ...|.+++|
T Consensus       268 ~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lp~l~a~~~Et~Rl~~~~~~~~~r~~~~~  347 (463)
T d3czha1         268 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSED  347 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSC
T ss_pred             HHhhhhccchhhhhhHHHhhccCcHHHHHHHHHHHhhcCCCCCCCHHHHHhhhhcccccceeeeeeccccccceecccCC
Confidence            5789999999999999999999999999999999999988888999999999999999999999999888 678899999


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN  160 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  160 (202)
                      +.++|+.||+|+.|.++.+.+|+||++|+||++|+|+||++.+.  ....+..|+|||+|+|.|+|++||.+|++++++.
T Consensus       348 ~~~~g~~ipkG~~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~--~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~la~  425 (463)
T d3czha1         348 AVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSG--YFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTA  425 (463)
T ss_dssp             EEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCTTS--CBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHH
T ss_pred             cccCCcEECCCCcccCcHHHhhCCcccCCChhhcCccccCCCcc--ccCCCCceeCCCCCCcCCchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998742  2234568999999999999999999999999999


Q ss_pred             HHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623          161 LLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI  202 (202)
Q Consensus       161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  202 (202)
                      ||++|||+++++.   .++.....+++..|+ +++|++++|.
T Consensus       426 ll~~f~~~~~~~~---~~~~~~~~~~~~~p~-~~~v~~~~R~  463 (463)
T d3czha1         426 LLQRFHLHFPHEL---VPDLKPRLGMTLQPQ-PYLICAERRH  463 (463)
T ss_dssp             HHHHEEEECGGGC---CCCCCCCSSSSCCCC-CCCBEEEECC
T ss_pred             HHHhcEEEeCCCC---CCCceeccCeEEecc-CcEEEEEeCc
Confidence            9999999997653   334455566666665 6788888884


No 3  
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-48  Score=323.43  Aligned_cols=195  Identities=25%  Similarity=0.329  Sum_probs=167.4

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCcc-ccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPR-STTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r-~~~~~   80 (202)
                      +++||++||+.+++|++++|++||+++++|++|++++.+.+..++..++.+||||++|++|++|++|+++...| .+.+|
T Consensus       269 ~~~Ag~dTTa~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~yL~a~i~E~lRl~p~~~~~~r~~~~~~  348 (467)
T d1r9oa_         269 LFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCD  348 (467)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSC
T ss_pred             HHHcccccchhHHHHHHHHhhcCchHHHHHHhhhhhhcCCCCCCcHHHhhhhhhhhhhccccccccccCCcccccccccc
Confidence            57899999999999999999999999999999999999888889999999999999999999999999995555 55778


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN  160 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  160 (202)
                      +.++|+.||+|+.|.++.+.+|+|+++|+||++|||+||++++..  ...+..|+|||+|+|.|+|++||.+|++++++.
T Consensus       349 ~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~--~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~  426 (467)
T d1r9oa_         349 IKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGN--FKKSKYFMPFSAGKRICVGEALAGMELFLFLTS  426 (467)
T ss_dssp             EEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSC--BCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHH
T ss_pred             cccceeEEecCCccccchhhhcCCcccCcCcceeCccccCCCCCC--cCCCCCcccCCCCCcCChHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999976432  234567999999999999999999999999999


Q ss_pred             HHhhceeecCCCCCCCCcccccc-cceeecccCCeEEEEeec
Q 035623          161 LLYKFDWKMPEGMKNEDLDYDIL-PGVAMHKKIPLKLMATKF  201 (202)
Q Consensus       161 ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r  201 (202)
                      |+++|||+++.+.  +.++.... .+++..|+ ++.++++||
T Consensus       427 ll~~f~~e~~~~~--~~~~~~~~~~~~~~~p~-~~~~~~~Pr  465 (467)
T d1r9oa_         427 ILQNFNLKSLVDP--KNLDTTPVVNGFASVPP-FYQLCFIPI  465 (467)
T ss_dssp             HHHHEEEEESSCG--GGCCCCCBCCSSSCBCC-CCCEEEEEC
T ss_pred             HHHhCEEEECCCC--CCCCCccccCcccccCC-CceEEEEec
Confidence            9999999977654  33444332 23343333 455666665


No 4  
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=8.6e-49  Score=324.61  Aligned_cols=197  Identities=24%  Similarity=0.420  Sum_probs=173.8

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      +++||++||+.+++|++++|+.||++|++|++|++++.+.+..++.+++.++|||+++++|++|++|+++...|.+++|+
T Consensus       249 ll~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~p~~~~~~~~~~~~~  328 (445)
T d2ciba1         249 MMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEF  328 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSCCHHHHHHHHHHHHHSCSCCCEEEEECSCE
T ss_pred             hhhhccccchhhcccccccccccccccccccccccccccccccchhhhcccchhhccccccccccccccceecccccccc
Confidence            57899999999999999999999999999999999999888888999999999999999999999999998889999999


Q ss_pred             eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623           82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL  161 (202)
Q Consensus        82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  161 (202)
                      .++|+.||+|+.|.++.+.+|+||++|+||++|+|+||++.+. +....+..|+|||+|+|.|||++||..+++++++.|
T Consensus       329 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~PeRf~~~~~-~~~~~~~~~~pFG~G~r~C~G~~~A~~~~~~~la~l  407 (445)
T d2ciba1         329 EVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ-EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVL  407 (445)
T ss_dssp             EETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTC-HHHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHH
T ss_pred             ccceeeccccccccccccccccCcccCCChhhCCcccccCccc-cccCCCCcccCCCCCCccChhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999997632 222345689999999999999999999999999999


Q ss_pred             HhhceeecCCCCCCCCcccccccceeecccCCeEEEEeecC
Q 035623          162 LYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKFI  202 (202)
Q Consensus       162 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  202 (202)
                      +++|||+++++.  +.... .....+..++.++++++++|.
T Consensus       408 l~~f~~~~~~~~--~~~~~-~~~~~~~~~~~~~~v~~~~Rs  445 (445)
T d2ciba1         408 LREYEFEMAQPP--ESYRN-DHSKMVVQLAQPAAVRYRRRT  445 (445)
T ss_dssp             HHHEEEEESSCG--GGCCE-ECSSSSCEECSCCEEEEEEC-
T ss_pred             HHhCEEEECCCC--Ccccc-ccceEEEccCCCEEEEEEeCc
Confidence            999999987653  22222 223444556668999999985


No 5  
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=2.5e-48  Score=322.31  Aligned_cols=195  Identities=25%  Similarity=0.387  Sum_probs=168.9

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~   80 (202)
                      +++||++||+.+++|++++|++||++++|+++|++++.+....++.+.+.+||||++|++|++|++|+++ ..+|...+|
T Consensus       268 ~~~Ag~~tta~~l~~~l~~l~~~p~~~~kl~~ei~~~~~~~~~~~~~~~~~lp~l~avi~EtlRl~~~~~~~~~~~~~~d  347 (465)
T d1po5a_         268 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKD  347 (465)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSC
T ss_pred             HHhhccccchhhhHHHHHHHhhhhhHHHHHHHHHHHHcCcccCcchhhhhhceeeecccccccccccccccccceeeecc
Confidence            5689999999999999999999999999999999999988888899999999999999999999999998 456677889


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN  160 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  160 (202)
                      ++++||.||+|+.|.++.+.+|+||++|+||++|+|+||++++..  ...+..|+|||+|+|.|+|++||.+|++++++.
T Consensus       348 ~~~~~~~ipkGt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~--~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~~a~  425 (465)
T d1po5a_         348 TQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA--LKRNEGFMPFSLGKRICLGEGIARTELFLFFTT  425 (465)
T ss_dssp             EEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSC--BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHH
T ss_pred             ceeeEEEecCCCEEEEeeeccccccccCCCcCccCccccCCCCcC--cCCCCCcCCCCCCCcCCchHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999986422  234568999999999999999999999999999


Q ss_pred             HHhhceeecCCCCCCCCccccccc-ceeecccCCeEEEEeec
Q 035623          161 LLYKFDWKMPEGMKNEDLDYDILP-GVAMHKKIPLKLMATKF  201 (202)
Q Consensus       161 ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r  201 (202)
                      ||++|||+++.+.  +++++.... +++..+ .++++++++|
T Consensus       426 ll~~f~~~~~~~~--~~~~~~~~~~~~~~~p-~~~~~~~~~R  464 (465)
T d1po5a_         426 ILQNFSIASPVPP--EDIDLTPRESGVGNVP-PSYQIRFLAR  464 (465)
T ss_dssp             HHHHEEEECSSCG--GGCCCCCCSTTSSCCC-CCCCBEEEEC
T ss_pred             HHHhCEEEeCCCC--CCCCCccccccceecC-CccEEEEEeC
Confidence            9999999986654  344444322 333333 3667777777


No 6  
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]}
Probab=100.00  E-value=1.4e-44  Score=297.12  Aligned_cols=172  Identities=20%  Similarity=0.364  Sum_probs=150.5

Q ss_pred             eeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCccee
Q 035623            3 FVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEECV   82 (202)
Q Consensus         3 ~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~~   82 (202)
                      ++||++||+.+++|++++|++||++|+++++|                 ++|||++||+|++|++|+++...|.+.+|++
T Consensus       235 l~ag~~tts~~l~~~l~~L~~~P~vq~kl~~e-----------------~~~~l~a~i~E~lRl~p~~~~~~r~~~~d~~  297 (411)
T d1izoa_         235 VLRPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQEVRRYYPFGPFLGALVKKDFV  297 (411)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHHHHHHHHHHHHSCCCCEEEEEECSCEE
T ss_pred             hhcccccchHHHHHHHHHHHhccccccccccc-----------------ccchHHHHHHHHHHhhhcccccccccccccc
Confidence            57999999999999999999999999999876                 5699999999999999999988899999999


Q ss_pred             ecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCC----CCCCccHHHHHHHHHHHH
Q 035623           83 VDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSG----RRICPGISMAMRTLELAL  158 (202)
Q Consensus        83 ~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G----~~~C~G~~la~~~~~~~l  158 (202)
                      ++||.||+|+.|.++.+.+|+||++|+||++|+|+||++.+.     ....|+|||+|    +|+|||++||.+++++++
T Consensus       298 i~g~~ipkgt~V~~~~~~~~~dp~~~~~p~~F~PeR~~~~~~-----~~~~~~pFg~G~~~~~r~C~G~~~A~~~~~~~l  372 (411)
T d1izoa_         298 WNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREE-----NLFDMIPQGGGHAEKGHRCPGEGITIEVMKASL  372 (411)
T ss_dssp             ETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCC-----CSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHH
T ss_pred             cceeecccccchhhhhhhhhcccccCCCccccCccccCCCCC-----CCCccCCCCCCCCCCCeEChhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999997632     34578999999    799999999999999999


Q ss_pred             HHHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623          159 ANLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF  201 (202)
Q Consensus       159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  201 (202)
                      +.||++||++++++.    ..+..... ...|+.++.+++.+|
T Consensus       373 a~ll~~f~~~~~~~~----~~~~~~~~-~~~p~~~~~~~~~~R  410 (411)
T d1izoa_         373 DFLVHQIEYDVPEQS----LHYSLARM-PSLPESGFVMSGIRR  410 (411)
T ss_dssp             HHHHHTEEEECCSCC----CCCCSSSS-SCCCTTCCEEEEEEE
T ss_pred             HHHHHhcEEEcCCCC----cCCCcccc-CCccCCCcEEEEEeC
Confidence            999999999987643    23332222 234455788877776


No 7  
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]}
Probab=100.00  E-value=1.8e-44  Score=299.28  Aligned_cols=189  Identities=27%  Similarity=0.484  Sum_probs=164.1

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      +++||++||+.+++|++++|+.||++++++++|+++..... ..+.+++.++|||+||++|++|++|+++...|.+.++.
T Consensus       259 ~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~~~~~~-~~~~~~l~~~p~L~a~i~E~lR~~p~~~~~~r~~~~~~  337 (453)
T d2ij2a1         259 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDT  337 (453)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSS-SCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCE
T ss_pred             ccccccccchhhhhcchhhhhcccccchhhhhhhhhhhccc-cCChhhhhcCCcchhhhhhhhccccccccccccccccc
Confidence            57899999999999999999999999999999999986544 46899999999999999999999999887777777765


Q ss_pred             ee-cCeEeCCCcEEEecccccCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623           82 VV-DGHKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA  159 (202)
Q Consensus        82 ~~-~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~  159 (202)
                      ++ +|+.||+|+.|.++.+.+|+||++| ++|++|+|+||++.+..    .+..|+|||+|+|+|+|++||.++++++++
T Consensus       338 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~dp~~F~PeRfl~~~~~----~~~~~~pFG~G~r~C~G~~~A~~~~~~~la  413 (453)
T d2ij2a1         338 VLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI----PQHAFKPFGNGQRACIGQQFALHEATLVLG  413 (453)
T ss_dssp             EETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGGSSGGGS----CTTSCCTTCCGGGSCTTHHHHHHHHHHHHH
T ss_pred             ccCCcceeecccccccchhhcccChhhcCCchhhcCccccCCCCCC----CCCcccCCCCCCccChhHHHHHHHHHHHHH
Confidence            55 7799999999999999999999999 68999999999976322    346799999999999999999999999999


Q ss_pred             HHHhhceeecCCCCCCCCcccccccceeecccCCeEEEEeec
Q 035623          160 NLLYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMATKF  201 (202)
Q Consensus       160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  201 (202)
                      .||++||+++.++.   +++..  .+++..|+ +++|++++|
T Consensus       414 ~ll~~f~~~~~~~~---~~~~~--~~~~~~p~-~~~v~~~~R  449 (453)
T d2ij2a1         414 MMLKHFDFEDHTNY---ELDIK--ETLTLKPE-GFVVKAKSK  449 (453)
T ss_dssp             HHHHHEEEECTTCC---CCCEE--ESSSEEET-TCEEEEEEC
T ss_pred             HHHHhCEEEeCCCC---ccCce--eeeEEccC-CeEEEEEEC
Confidence            99999999987653   33333  34455555 688888887


No 8  
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=1.4e-40  Score=271.38  Aligned_cols=167  Identities=23%  Similarity=0.370  Sum_probs=146.4

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      +++||+|||+.+++|++++|++||++++++++|+..+                  .++++|++|++|+++.+.|.+++|+
T Consensus       218 ~l~ag~dTt~~~l~~~l~~L~~~P~v~~~l~~E~~~~------------------~a~i~EtlRl~p~~~~~~r~~~~d~  279 (385)
T d1n97a_         218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA------------------LAAFQEALRLYPPAWILTRRLERPL  279 (385)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH------------------HHHHHHHHHHSCSSCCEEEEESSCE
T ss_pred             HHHhhhccchhhhhhhhhHhhhhcccccccccccccc------------------cceeecccccccccccccccccccc
Confidence            5789999999999999999999999999999998755                  5799999999999999889999999


Q ss_pred             eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623           82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL  161 (202)
Q Consensus        82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  161 (202)
                      +++|+.||+|+.|.++.+.+|+|  .|+||++|+|+||++.+.    .....|+|||+|+|.|||++||.++++++++.|
T Consensus       280 ~~~g~~i~~g~~v~~~~~~~~~~--~~~dp~~F~PeRf~~~~~----~~~~~~lpFG~G~r~C~G~~la~~~~~~~l~~l  353 (385)
T d1n97a_         280 LLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEERG----TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAF  353 (385)
T ss_dssp             EETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSCC----CCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccc--cCCCCcccCccccCcccC----CCCCCccCCCCCcccCchHHHHHHHHHHHHHHH
Confidence            99999999999999999999986  699999999999997632    234578999999999999999999999999999


Q ss_pred             HhhceeecCCCCCCCCcccccccceeecccCCeEEEEe
Q 035623          162 LYKFDWKMPEGMKNEDLDYDILPGVAMHKKIPLKLMAT  199 (202)
Q Consensus       162 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (202)
                      +++|||++.++.   ..    ...++..|+.++++++|
T Consensus       354 l~~f~~~~~~~~---~~----~~~~~~~p~~~~~~r~r  384 (385)
T d1n97a_         354 FRRFRLDPLPFP---RV----LAQVTLRPEGGLPARPR  384 (385)
T ss_dssp             HTTCBCCCCCCC---CE----EESSSEEETTCCEECCB
T ss_pred             HHhCEEEeCCCC---cc----ccceEEeecCCeEEEee
Confidence            999999987643   11    12345666777877665


No 9  
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=2e-37  Score=253.85  Aligned_cols=143  Identities=22%  Similarity=0.322  Sum_probs=132.2

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~   80 (202)
                      +++||+|||+.+++|++++|++||+++++|++|.                  .++.++++|++|++++.. .+.|.+++|
T Consensus       229 l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~------------------~~~~~~i~E~lRl~~p~~~~~~R~a~~d  290 (395)
T d1n40a_         229 FFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP------------------ELIPAGVEELLRINLSFADGLPRLATAD  290 (395)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHTCCCBCSCEEEEESSC
T ss_pred             HHhhhcchhhhhhHHHHHHHhhCccccccccchh------------------hhhhhhhhhhcccccccccceeeecccc
Confidence            5679999999999999999999999999999874                  367899999999998866 788999999


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN  160 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  160 (202)
                      ++++|+.||+|+.|.++.+.+|+||++|++|++|||+|+.          +..|++||.|+|.|+|+++|++|++++++.
T Consensus       291 ~~i~G~~ip~G~~V~~~~~~a~rDp~~f~dP~~F~p~R~~----------~~~~l~FG~G~h~C~G~~lA~~e~~~~l~~  360 (395)
T d1n40a_         291 IQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN----------PTSHLAFGRGQHFCPGSALGRRHAQIGIEA  360 (395)
T ss_dssp             EEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSS----------TTCSSTTCCGGGCCTTHHHHHHHHHHHHHH
T ss_pred             cccccccccccceeeeeccccccccccCCCccccCCCCCC----------CCCCCCCCCCCccChhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999963          236899999999999999999999999999


Q ss_pred             HHhhc-eeecCCC
Q 035623          161 LLYKF-DWKMPEG  172 (202)
Q Consensus       161 ll~~f-~~~~~~~  172 (202)
                      |+++| +++++..
T Consensus       361 ll~r~p~~~l~~~  373 (395)
T d1n40a_         361 LLKKMPGVDLAVP  373 (395)
T ss_dssp             HHHHCTTCEESSC
T ss_pred             HHHhCCCCEECCC
Confidence            99999 8998653


No 10 
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]}
Probab=100.00  E-value=1e-37  Score=255.53  Aligned_cols=143  Identities=26%  Similarity=0.402  Sum_probs=131.4

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~   80 (202)
                      +++||++||+.+++|.+++++.+|++++++++|                  +++++++++|++|++|+++ ...|.+++|
T Consensus       232 ~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~~------------------~~~l~~~i~E~lRl~pp~~~~~~r~~~~d  293 (403)
T d1gwia_         232 MVAAGHETTISLIVNAVVNLSTHPEQRALVLSG------------------EAEWSAVVEETLRFSTPTSHVLIRFAAED  293 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTT------------------SSCHHHHHHHHHHHSCSBCCEEEEEESSC
T ss_pred             HHHccccchhhhhhhhhhhhhhhhHHHHHHHHh------------------hhcchhhccchhhhcCcccccccccccCC
Confidence            467999999999999999999999999999854                  4689999999999999988 556688999


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA  159 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~  159 (202)
                      +.++|+.||+|+.|.++.+.+|+||++| |||++|+|+||.+          ..|+|||.|+|.|+|++||++||+++++
T Consensus       294 ~~~~g~~ip~G~~V~~~~~~~~rd~~~~~pdP~~F~PeR~~~----------~~~lpFG~G~r~C~G~~lA~~e~~~~l~  363 (403)
T d1gwia_         294 VPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG----------NRHISFGHGPHVCPGAALSRMEAGVALP  363 (403)
T ss_dssp             EEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS----------SCCCTTCCSTTCCTTHHHHHHHHHHHHH
T ss_pred             eEecceeecccceeeeecccccCChhhcCCchhhcCCCCCCC----------CCcCccCCCCccChhHHHHHHHHHHHHH
Confidence            9999999999999999999999999998 8999999999943          2589999999999999999999999999


Q ss_pred             HHHhhc-eeecCCC
Q 035623          160 NLLYKF-DWKMPEG  172 (202)
Q Consensus       160 ~ll~~f-~~~~~~~  172 (202)
                      .|+++| ++++...
T Consensus       364 ~ll~~f~~~~l~~p  377 (403)
T d1gwia_         364 ALYARFPHLDLAVP  377 (403)
T ss_dssp             HHHHHCTTCEESSC
T ss_pred             HHHHhCCCCEECCC
Confidence            999999 9998653


No 11 
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]}
Probab=100.00  E-value=3.8e-36  Score=246.21  Aligned_cols=142  Identities=26%  Similarity=0.416  Sum_probs=132.3

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      ++++|++|++.+++|.+++|+.+|+.+++++++                  ..++.+++.|++|++|+.+.+.|.+.+|+
T Consensus       264 ~l~~g~~tt~~~l~~~~~~L~~~p~~~~~~~~~------------------~~~~~~~~ee~lr~~pp~~~~~r~~~~d~  325 (428)
T d1cpta_         264 IATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD------------------PALIPRLVDEAVRWTAPVKSFMRTALADT  325 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHHHHHHHHHHCCBCCCEEEESSCE
T ss_pred             hhhcccccccchhhhhhhhhhcChHhhhhhhhc------------------ccccccchhhcccccccccccceeeeeee
Confidence            467899999999999999999999999988764                  25789999999999999999999999999


Q ss_pred             eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623           82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL  161 (202)
Q Consensus        82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  161 (202)
                      +++|+.||+|+.|.++.+.+|+||++|+||++|+|+||..           .|+|||.|+|+|+|++||++|++++++.|
T Consensus       326 ~i~G~~ip~Gt~V~~~~~~~~rDp~~~~dP~~F~PeR~~~-----------~~~pFG~G~r~C~G~~lA~~el~~~l~~l  394 (428)
T d1cpta_         326 EVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN-----------RHLGFGWGAHMCLGQHLAKLEMKIFFEEL  394 (428)
T ss_dssp             EETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCCSC-----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHH
T ss_pred             eeCCEEccCCCEEEecHHhhCCCchhCCCccccCCCCCCC-----------CCCCcCCCcccChhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999932           57999999999999999999999999999


Q ss_pred             Hhhc-eeecCCC
Q 035623          162 LYKF-DWKMPEG  172 (202)
Q Consensus       162 l~~f-~~~~~~~  172 (202)
                      +++| ++++++.
T Consensus       395 l~~f~~~~~~~~  406 (428)
T d1cpta_         395 LPKLKSVELSGP  406 (428)
T ss_dssp             GGGEEEEEESSC
T ss_pred             HHhCCCCeECCC
Confidence            9999 6998754


No 12 
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=100.00  E-value=4e-36  Score=245.48  Aligned_cols=143  Identities=24%  Similarity=0.319  Sum_probs=133.5

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      +++||++||+.++.|++++|++||++++++++|++                  ++.+++.|.+|+.++.+...|.+.+|+
T Consensus       236 ~i~aG~dTt~~~l~~~l~~l~~~P~~~~~l~~e~~------------------~~~~~~~~~~~~~~~~~~~~R~~~~d~  297 (402)
T d1z8oa1         236 LLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------------------ALPNAVEEILRYIAPPETTTRFAAEEV  297 (402)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHTCSSCCEEEEESSCE
T ss_pred             HhcccccchhhHHHHHHHHHhhhhHHHHHHhcccc------------------ccccchhhhhhhhhcccccccccccCc
Confidence            57899999999999999999999999999998753                  567899999999999999999999999


Q ss_pred             eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623           82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL  161 (202)
Q Consensus        82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  161 (202)
                      +++|+.||+|+.|.++.+.+|+||++|++|++|+|+||.           ..++|||.|+|.|+|++||++|++++++.|
T Consensus       298 ~~~g~~ip~Gt~v~~~~~~~~~dp~~f~dP~~F~PeR~~-----------~~~lpFG~G~r~C~G~~lA~~el~~~la~l  366 (402)
T d1z8oa1         298 EIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT-----------RGHLSFGQGIHFCMGRPLAKLEGEVALRAL  366 (402)
T ss_dssp             EETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-----------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHH
T ss_pred             ccCCccccccchhhhhhhhhccChhhCCCccccCCCCCC-----------CCCCCCCCCccCChhHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999973           257999999999999999999999999999


Q ss_pred             Hhhc-eeecCCCC
Q 035623          162 LYKF-DWKMPEGM  173 (202)
Q Consensus       162 l~~f-~~~~~~~~  173 (202)
                      +++| ++++.+..
T Consensus       367 l~~f~~~~~~~~~  379 (402)
T d1z8oa1         367 FGRFPALSLGIDA  379 (402)
T ss_dssp             HHHCTTCEESSCG
T ss_pred             HHhCCCCeECCCC
Confidence            9999 99987643


No 13 
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]}
Probab=100.00  E-value=6.5e-36  Score=244.13  Aligned_cols=144  Identities=24%  Similarity=0.368  Sum_probs=132.7

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~   80 (202)
                      +++||++||+.+++|++++|++||+++++|++|.                  .+..+++.|++|++++.. ...|.+.++
T Consensus       232 ~~~ag~~tt~~~l~~~~~~L~~~pe~~~~L~~e~------------------~~~~~~~~e~lr~~~~~~~~~~R~~~~~  293 (399)
T d1jfba_         232 LLVAGNATMVNMIALGVATLAQHPDQLAQLKANP------------------SLAPQFVEELCRYHTASALAIKRTAKED  293 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSCCSCCEEEESSC
T ss_pred             hhhhccchhhhHHHHHHHHHhhchHHHHHHhccc------------------ccccceeeeccccccccccccccccccc
Confidence            5689999999999999999999999999998762                  356789999999999887 778999999


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN  160 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  160 (202)
                      +.++|+.||+|+.|.++.+.+|+||++|+||++|+|+||.+.         ..++|||.|+|+|+|++||++|++++++.
T Consensus       294 ~~~~g~~ip~G~~V~~~~~~~~~dp~~~~dP~~F~PeR~~~~---------~~~lpFG~G~r~C~G~~lA~~el~~~l~~  364 (399)
T d1jfba_         294 VMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP---------QDPLGFGFGDHRCIAEHLAKAELTTVFST  364 (399)
T ss_dssp             EEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS---------SCCCTTCCGGGSCTTHHHHHHHHHHHHHH
T ss_pred             ccccCCcCcccccchhhhhhhcCChhhCCCccccCcCCCCCC---------CCCcCCCCCCccChhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998754         35799999999999999999999999999


Q ss_pred             HHhhc-eeecCCC
Q 035623          161 LLYKF-DWKMPEG  172 (202)
Q Consensus       161 ll~~f-~~~~~~~  172 (202)
                      |+++| +++++..
T Consensus       365 Ll~rfp~~~l~~~  377 (399)
T d1jfba_         365 LYQKFPDLKVAVP  377 (399)
T ss_dssp             HHHHCTTCEESSC
T ss_pred             HHHhCCcCEECCC
Confidence            99999 9998654


No 14 
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]}
Probab=100.00  E-value=1.1e-35  Score=242.26  Aligned_cols=142  Identities=25%  Similarity=0.476  Sum_probs=130.1

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~   80 (202)
                      +++||+|||+.+++|++++|++||+++++|++|..                  +...++.|.+|+.++.. ...|.+.+|
T Consensus       236 ~l~ag~etta~~l~~~l~~L~~~p~~~e~l~~~~~------------------~~~~~~~~~~r~~~~~~~~~~~~~~~d  297 (401)
T d1q5da_         236 IIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFDNILRIGTVRFARQD  297 (401)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSBSSEEEEEESSC
T ss_pred             HHhcccchhhhHHHHHHHHHHhhHHHHHHhhcccc------------------cccccccchhhcccccccccccccccc
Confidence            57899999999999999999999999999987743                  35678899999999888 666788999


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN  160 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  160 (202)
                      +.++|+.||+|+.|.++.+.+|+||++|++|++|+|+||..           .|+|||.|+|.|+|++||++|+++++++
T Consensus       298 ~~~~g~~ip~G~~v~~~~~~~~rdp~~f~dP~~F~PeR~~~-----------~~lpFg~G~r~C~G~~lA~~e~~~~la~  366 (401)
T d1q5da_         298 LEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTS-----------ASLAYGRGPHVCPGVSLARLEAEIAVGT  366 (401)
T ss_dssp             EEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCT-----------TCCTTCCGGGCCTTHHHHHHHHHHHHHH
T ss_pred             ccccCcccCcceeEeeeccccCCCcccCCCccccCCCCCCC-----------CCCCCCCCccCChhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999842           5799999999999999999999999999


Q ss_pred             HHhhc-eeecCCC
Q 035623          161 LLYKF-DWKMPEG  172 (202)
Q Consensus       161 ll~~f-~~~~~~~  172 (202)
                      |+++| ++++.++
T Consensus       367 ll~rf~~~~l~~~  379 (401)
T d1q5da_         367 IFRRFPEMKLKET  379 (401)
T ss_dssp             HHHHCTTCEECSC
T ss_pred             HHHhCCCCeECCC
Confidence            99999 8998753


No 15 
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]}
Probab=100.00  E-value=4.5e-35  Score=239.12  Aligned_cols=143  Identities=24%  Similarity=0.333  Sum_probs=129.9

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC--CCccccCc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP--LIPRSTTE   79 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~--~~~r~~~~   79 (202)
                      ++++|.+||+.+++|+++++++||+.++++++|.+                  ++.+++.|++|+.|+.+  .+.|.+.+
T Consensus       231 ~~~ag~~tT~~~l~~~l~~l~~~p~~~~~~~~~~~------------------~~~~~~~e~~r~~p~~~~~~~~R~~~~  292 (399)
T d1s1fa_         231 LLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPE------------------IRPRAIDELLRWIPHRNAVGLSRIALE  292 (399)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHSCCBSSCCCCEEESS
T ss_pred             HHhhcccccccchhhhhhhhhhCchhhhhhhhhhc------------------ccccccccccccccccccccccceeee
Confidence            46789999999999999999999999999998743                  45789999999999876  45799999


Q ss_pred             ceeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623           80 ECVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA  159 (202)
Q Consensus        80 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~  159 (202)
                      |++++|+.||+|+.|.++.+.+|+||++|+||++|+|+|+           ...|+|||.|+|.|+|++||++|++++++
T Consensus       293 ~~~l~G~~ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~-----------~~~~lpFG~G~r~C~G~~lA~~e~~~~l~  361 (399)
T d1s1fa_         293 DVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERS-----------PNPHVSFGFGPHYCPGGMLARLESELLVD  361 (399)
T ss_dssp             CEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC-------------CCCCTTCCSTTCCTTHHHHHHHHHHHHH
T ss_pred             eeeccceeecCCCeecccccccccChhhcCCccccCCCCC-----------CCCCCCCCCCccCChhHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999994           23689999999999999999999999999


Q ss_pred             HHHhhc-eeecCCCC
Q 035623          160 NLLYKF-DWKMPEGM  173 (202)
Q Consensus       160 ~ll~~f-~~~~~~~~  173 (202)
                      .|+++| ++++..+.
T Consensus       362 ~Ll~rf~~~~~~~~~  376 (399)
T d1s1fa_         362 AVLDRVPGLKLAVAP  376 (399)
T ss_dssp             HHHHHSTTCEESSCG
T ss_pred             HHHHHCCCCEECCCc
Confidence            999999 89986653


No 16 
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]}
Probab=100.00  E-value=1.3e-34  Score=236.11  Aligned_cols=142  Identities=24%  Similarity=0.390  Sum_probs=128.1

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCC-CccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~-~~r~~~~~   80 (202)
                      ++++|++|++.+++|.+++++.++..+++++.+                  ..+..++++|++|++|+++. ..|.+.+|
T Consensus       233 l~~~g~~t~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~~~~~i~e~~R~~p~~~~~~~~~~~~d  294 (401)
T d1odoa_         233 MISAGYETTVNVIDQAVHTLLTRPDQLALVRKG------------------EVTWADVVEETLRHEPAVKHLPLRYAVTD  294 (401)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHT------------------SSCHHHHHHHHHHHSCSBSCEEEEEESSC
T ss_pred             HHhccccchhhhhhhhhcccccchhhhhhcccc------------------ccccceeeccccccccccccccccccccc
Confidence            467899999999999999999999998887754                  23567899999999999984 45678899


Q ss_pred             eee-cCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHH
Q 035623           81 CVV-DGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALA  159 (202)
Q Consensus        81 ~~~-~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~  159 (202)
                      +++ +|+.||+||.|.++.+.+|+||++|+||++|+|+||++           .|+|||+|+|.|+|++||.+|++++++
T Consensus       295 ~~~~~G~~ip~Gt~v~~~~~~~hrd~~~~~dp~~F~PeR~~~-----------~~~pFG~G~r~C~G~~lA~~e~~~~la  363 (401)
T d1odoa_         295 IALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRTVK-----------EHLAFGHGVHFCLGAPLARMEVTLALE  363 (401)
T ss_dssp             EECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSCC-----------CCCTTCSSTTSCTTHHHHHHHHHHHHH
T ss_pred             eeecCCEEecCCccccccHHHHhCCcccCCchhhcCCCCCCC-----------CCCCCCCCCcCChhHHHHHHHHHHHHH
Confidence            888 79999999999999999999999999999999999974           368999999999999999999999999


Q ss_pred             HHHhhc-eeecCCC
Q 035623          160 NLLYKF-DWKMPEG  172 (202)
Q Consensus       160 ~ll~~f-~~~~~~~  172 (202)
                      +||++| ++++++.
T Consensus       364 ~ll~~f~~~~l~~~  377 (401)
T d1odoa_         364 SLFGRFPDLRLADP  377 (401)
T ss_dssp             HHHHHCTTCEESCT
T ss_pred             HHHHHCCCcEECCC
Confidence            999999 9998754


No 17 
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=100.00  E-value=8.7e-35  Score=235.62  Aligned_cols=138  Identities=27%  Similarity=0.395  Sum_probs=124.6

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      +++||+|||+.+++|++++|+++|+.......+                     ..++|+|++|++|+++...|.+++|+
T Consensus       207 ~~~ag~ett~~~l~~~~~~l~~~~~~~~~~~~~---------------------~~~ai~E~lR~~p~~~~~~r~~~~~~  265 (367)
T d1ue8a_         207 LMIAGNETTTNLIGNAIEDFTLYNSWDYVREKG---------------------ALKAVEEALRFSPPVMRTIRVTKEKV  265 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHC---------------------SHHHHHHHHHHSCSBCCEEEEESSCE
T ss_pred             eeeeccccccccccchHHHhhhccccchhhhhh---------------------hHHHHHhhhhhccccccccccccccc
Confidence            468999999999999999999999765543322                     23679999999999999999999999


Q ss_pred             eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623           82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL  161 (202)
Q Consensus        82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  161 (202)
                      +++|+.||+|+.|.++.+.+|+||++|+||++|||+||..           .++|||.|+|.|+|++||++|++++++.|
T Consensus       266 ~l~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~P~R~~~-----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~L  334 (367)
T d1ue8a_         266 KIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPN-----------PHLSFGSGIHLCLGAPLARLEARIALEEF  334 (367)
T ss_dssp             EETTEEECSSCEEEECHHHHTTCTTTSSSTTSCCTTCCSC-----------CCCTTCCSTTSCTTHHHHHHHHHHHHHHH
T ss_pred             eeeeeeeecCCcccccccccccCcccCCChhhcCCCCCCC-----------CCCCCCCCCcCChhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999742           47999999999999999999999999999


Q ss_pred             HhhceeecCC
Q 035623          162 LYKFDWKMPE  171 (202)
Q Consensus       162 l~~f~~~~~~  171 (202)
                      +++|+++...
T Consensus       335 l~rf~~~~~~  344 (367)
T d1ue8a_         335 AKKFRVKEIV  344 (367)
T ss_dssp             HHHEEEEEEE
T ss_pred             HHhCCccccC
Confidence            9999986543


No 18 
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]}
Probab=100.00  E-value=2e-34  Score=236.08  Aligned_cols=142  Identities=23%  Similarity=0.373  Sum_probs=126.9

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhh-cCCCCCCCCccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETF-RLQPPVPLIPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~l-Rl~~~~~~~~r~~~~~   80 (202)
                      +++||+|||+.+++|++++|++||++++++++|..                  +..+++.|.+ |+.++.....|.+++|
T Consensus       239 ~l~aG~dTt~~~l~~~l~~L~~~p~~~~~~~~~~~------------------~~~~~~~e~~~~~~~~~~~~~R~~~~d  300 (403)
T d1ueda_         239 LILGGVETVAGMIGFGVLALLDNPGQIELLFESPE------------------KAERVVNELVRYLSPVQAPNPRLAIKD  300 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH------------------HHHHHHHHHHHHHCSSCSCSCEEESSC
T ss_pred             HHhcchhhHHHHHHHHHHHHhhccchhhhhhhhcc------------------cccceeeeeccccccccccceeecccc
Confidence            57899999999999999999999999999998754                  3345666555 5666666888999999


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN  160 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  160 (202)
                      ++++|+.||+|+.|.++.+.+||||++|+||++|||+||..           .++|||+|+|.|+|++||++|+++++++
T Consensus       301 ~~~~G~~ip~G~~V~~~~~~~~rdp~~f~dP~~F~PeR~~~-----------~~lpFG~G~r~CiG~~lA~~el~~~l~~  369 (403)
T d1ueda_         301 VVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAAV-----------SDVGFGHGIHYCVGAALARSMLRMAYQT  369 (403)
T ss_dssp             EEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCCC-----------CCCTTCCSTTSCTTHHHHHHHHHHHHHH
T ss_pred             cccCCCccccccceecchhcccCCcccCCCccccCCCCCCC-----------CCCCCCCCCccChHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999732           4799999999999999999999999999


Q ss_pred             HHhhc-eeecCCC
Q 035623          161 LLYKF-DWKMPEG  172 (202)
Q Consensus       161 ll~~f-~~~~~~~  172 (202)
                      |+++| +++++..
T Consensus       370 Ll~~f~~~~l~~~  382 (403)
T d1ueda_         370 LWRRFPGLRLAVP  382 (403)
T ss_dssp             HHHHCTTCEESSC
T ss_pred             HHHhCCCCEECCC
Confidence            99999 8998754


No 19 
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]}
Probab=100.00  E-value=4e-34  Score=234.59  Aligned_cols=142  Identities=23%  Similarity=0.314  Sum_probs=130.1

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      +++||++||+.+++|++++|+.||+++++++++                  ..++.++++|++|++++.. ..|.+++|+
T Consensus       235 l~~ag~eTt~~~l~~~~~~L~~~p~~~~~l~~~------------------~~~~~~~v~E~lR~~~p~~-~~r~~~~~~  295 (404)
T d1re9a_         235 LLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER------------------PERIPAACEELLRRFSLVA-DGRILTSDY  295 (404)
T ss_dssp             HHHTTTHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHHHHHHHHHTCCBC-CEEEESSCE
T ss_pred             HHHHhhhhhHHHHHHHHHHHhhhhHHHHHHHhh------------------hhccccccccccccccccc-cccccccce
Confidence            568999999999999999999999999888754                  3578999999999999875 579999999


Q ss_pred             eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623           82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL  161 (202)
Q Consensus        82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  161 (202)
                      +++|+.||+|+.|.++.+++||||++|+||++|||+|.           ...+++||.|+|.|+|++||++|++++++.|
T Consensus       296 ~~~G~~ip~G~~V~~~~~aanrDp~~f~dPd~F~p~R~-----------~~~hl~FG~G~h~C~G~~lA~~e~~~~l~~l  364 (404)
T d1re9a_         296 EFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQ-----------KVSHTTFGHGSHLCLGQHLARREIIVTLKEW  364 (404)
T ss_dssp             EETTEEECTTCEEECCHHHHTTCTTTSSSTTSCCTTCS-----------SCCCCTTCCGGGCCTTHHHHHHHHHHHHHHH
T ss_pred             ecCCccCccchhhhhhhHhhcCCcccCCCccccCCCCC-----------CCCCCCCCCCcccCchHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999993           2257999999999999999999999999999


Q ss_pred             Hhhc-eeecCCCC
Q 035623          162 LYKF-DWKMPEGM  173 (202)
Q Consensus       162 l~~f-~~~~~~~~  173 (202)
                      +++| +++++++.
T Consensus       365 l~r~p~~~l~~~~  377 (404)
T d1re9a_         365 LTRIPDFSIAPGA  377 (404)
T ss_dssp             HHHCCCCEECTTC
T ss_pred             HHHCCCcEECCCC
Confidence            9999 99987653


No 20 
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=100.00  E-value=1.6e-33  Score=227.84  Aligned_cols=140  Identities=25%  Similarity=0.402  Sum_probs=127.5

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCCCCccccCcce
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTTEEC   81 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~r~~~~~~   81 (202)
                      +++||++||+.+++|+++.++.+|+.+.+...+                    +...++.|++|+.+++....|.+++|+
T Consensus       206 ~l~aG~~tt~~~l~~~l~~l~~~~~~~~~~~~~--------------------l~~~~~ee~~r~~~~~~~~~R~~~~d~  265 (366)
T d1io7a_         206 LLIAGNETTTNLISNSVIDFTRFNLWQRIREEN--------------------LYLKAIEEALRYSPPVMRTVRKTKERV  265 (366)
T ss_dssp             HHHTTHHHHHHHHHHHHHHHHHTTCHHHHHHHT--------------------CHHHHHHHHHHHSCSBCCEEEEESSCE
T ss_pred             HHHhccchhHHHHHHHHHHhhcccccccccccc--------------------hhhhhhhhhhhccccccccceeccccc
Confidence            467999999999999999999999877665433                    356788899999999999999999999


Q ss_pred             eecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 035623           82 VVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALANL  161 (202)
Q Consensus        82 ~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  161 (202)
                      +++|+.||+|+.|.++.+.+|+||++|+||++|+|+||.           ..|+|||.|+|.|+|++||++|++++++.|
T Consensus       266 ~i~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~l  334 (366)
T d1io7a_         266 KLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNP-----------NPHLSFGSGIHLCLGAPLARLEARIAIEEF  334 (366)
T ss_dssp             EETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCS-----------CCCCTTCCGGGSCTTHHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCEEeeeeccccccccccCchhhcCCCCCC-----------CCCCCCCCCccCChhHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999963           257999999999999999999999999999


Q ss_pred             Hhhc-eeecCCC
Q 035623          162 LYKF-DWKMPEG  172 (202)
Q Consensus       162 l~~f-~~~~~~~  172 (202)
                      +++| ++++++.
T Consensus       335 l~rf~~~~~~~~  346 (366)
T d1io7a_         335 SKRFRHIEILDT  346 (366)
T ss_dssp             HTTCSEEEEEEE
T ss_pred             HHHCCCCeeCCC
Confidence            9999 6888754


No 21 
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=99.97  E-value=3.1e-32  Score=222.13  Aligned_cols=149  Identities=19%  Similarity=0.319  Sum_probs=129.4

Q ss_pred             eeeecchhHHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCChhhhccChhHHHHHHHhhcCCCCCC-CCccccCcc
Q 035623            2 VFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTTEE   80 (202)
Q Consensus         2 ~~~ag~~tt~~~~~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~-~~~r~~~~~   80 (202)
                      ++++|++||+.+++|.+++++.+|+.+++++++.                  .++..++.|.+|+.++.. ...|.+.+|
T Consensus       229 ~~~ag~~tt~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~~~~~~~e~~r~~~~~~~~~~r~~~~d  290 (394)
T d1lfka_         229 VMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDE------------------QSAQRAVDELIRYLTVPYSPTPRIARED  290 (394)
T ss_dssp             HHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCH------------------HHHHHHHHHHHHHHCCBSCCSCEEESSC
T ss_pred             HHHhhccchHHHHHHHHHHhhcchhhhhhhcccc------------------cccccchhcccccccccccceeeccccC
Confidence            4678999999999999999999998776654332                  346788999999877755 788999999


Q ss_pred             eeecCeEeCCCcEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHHHHHHHHHHHHHH
Q 035623           81 CVVDGHKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGISMAMRTLELALAN  160 (202)
Q Consensus        81 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  160 (202)
                      ++++|+.||+|+.|.++.+.+|+||++|+||++|+|+|+           ...|+|||.|+|.|+|++||++|++++++.
T Consensus       291 ~~~~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~-----------~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~  359 (394)
T d1lfka_         291 LTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTRE-----------PIPHVAFGHGVHHCLGAALARLELRTVFTE  359 (394)
T ss_dssp             EEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSC-----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHH
T ss_pred             eeecCceeccCCccccccccccCCcccccChhhcCCCCC-----------CCCCCCCCCCCcCCchHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999993           235899999999999999999999999999


Q ss_pred             HHhhc-eeecCCCCCCCCcccc
Q 035623          161 LLYKF-DWKMPEGMKNEDLDYD  181 (202)
Q Consensus       161 ll~~f-~~~~~~~~~~~~~~~~  181 (202)
                      ||++| +++++++.  +.+.+.
T Consensus       360 Ll~~f~~~~l~~p~--~~~~~~  379 (394)
T d1lfka_         360 LWRRFPALRLADPA--QDTEFR  379 (394)
T ss_dssp             HHHHCTTCEESSTT--CCCEEE
T ss_pred             HHHhCCCCEECCCc--Ccceee
Confidence            99999 89987543  344443


No 22 
>d1mp9a2 d.129.1.1 (A:97-197) TATA-box binding protein (TBP), C-terminal domain {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=65.17  E-value=3.1  Score=25.21  Aligned_cols=59  Identities=24%  Similarity=0.302  Sum_probs=35.8

Q ss_pred             CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccH-HHHHH-HHHHHHHHHHhhce-eecCC
Q 035623          112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGI-SMAMR-TLELALANLLYKFD-WKMPE  171 (202)
Q Consensus       112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~-~la~~-~~~~~l~~ll~~f~-~~~~~  171 (202)
                      .+|+|+||-.- .-....+....+-|+.|.=.|.|- ..... .....+..+|.+|+ .+..+
T Consensus        35 ~~YePe~fpgl-i~R~~~pk~t~lIF~SGKivitGaks~~~~~~a~~~i~~~L~~~~~~~~~~   96 (101)
T d1mp9a2          35 NMYEPEQFPGL-IYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVELDCVKPVE   96 (101)
T ss_dssp             EECCTTTCSSE-EEEETTTTEEEEECTTSEEEEEEESSHHHHHHHHHHHHHHHHHTTCEECTT
T ss_pred             CEECcccCCeE-EEEecCCcEEEEEEcCCEEEEEccCCHHHHHHHHHHHHHHHHHhCCCCcCC
Confidence            47888888532 111223455788999999999983 33322 22334556777786 55544


No 23 
>d1aisa2 d.129.1.1 (A:93-181) TATA-box binding protein (TBP), C-terminal domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=63.04  E-value=2  Score=25.43  Aligned_cols=34  Identities=32%  Similarity=0.623  Sum_probs=23.9

Q ss_pred             CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCcc
Q 035623          112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPG  146 (202)
Q Consensus       112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G  146 (202)
                      -+|+|++|-.- .-....+....+-|..|.=.|.|
T Consensus        35 ~~Y~Pe~fpgl-i~R~~~p~~t~lIF~SGKivitG   68 (89)
T d1aisa2          35 CEYEPEQFPGV-IYRVKEPKSVILLFSSGKIVCSG   68 (89)
T ss_dssp             EECCTTTCSSE-EEEETTTTEEEEECTTSEEEEEE
T ss_pred             cEECcccCceE-EEEEcCCcEEEEEEcCCEEEEEc
Confidence            46999998542 11122345588999999999998


No 24 
>d1qnaa1 d.129.1.1 (A:17-115) TATA-box binding protein (TBP), C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=52.48  E-value=1.4  Score=26.85  Aligned_cols=54  Identities=24%  Similarity=0.460  Sum_probs=31.4

Q ss_pred             CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccH-HH--HHHHHHHHHHHHHhhcee
Q 035623          112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGI-SM--AMRTLELALANLLYKFDW  167 (202)
Q Consensus       112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~-~l--a~~~~~~~l~~ll~~f~~  167 (202)
                      -+|+|++|-.- --....+....+-|+.|.=.|.|- ..  |...++. +..+|+++.+
T Consensus        34 ~eYePe~fpgl-i~R~~~P~~t~lIF~SGKivitGaks~~~~~~a~~~-i~~~l~k~g~   90 (99)
T d1qnaa1          34 AEYNPKRFAAV-IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARK-YARIVQKLGF   90 (99)
T ss_dssp             EEECTTTCSEE-EEEETTTTEEEEEETTSEEEEEEESSHHHHHHHHHH-HHHHHHHTTC
T ss_pred             CEECcccCCEE-EEEeCCCcEEEEEEcCCEEEEeccCCHHHHHHHHHH-HHHHHHHcCC
Confidence            35889988532 111233456889999999999983 22  2333333 3345565544


No 25 
>d1aisa1 d.129.1.1 (A:1-92) TATA-box binding protein (TBP), C-terminal domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=47.24  E-value=2.5  Score=25.14  Aligned_cols=38  Identities=26%  Similarity=0.516  Sum_probs=25.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccH
Q 035623          108 WDKPDEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGI  147 (202)
Q Consensus       108 ~~~p~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~  147 (202)
                      +++. +|+|+||-.- .-....+...++-|+.|.=.|.|-
T Consensus        33 ~~~~-~YePe~fpgl-~~R~~~p~~~~lIF~sGkivitGa   70 (92)
T d1aisa1          33 CPNS-KYNPEEFPGI-ICHLDDPKVALLIFSSGKLVVTGA   70 (92)
T ss_dssp             STTC-BCCTTTCSSE-EEECSSSCCEEEECTTSEEEEEEE
T ss_pred             CCCC-EECcccCCeE-EEEeCCCcEEEEEECCCEEEEEcc
Confidence            3454 7999998542 112233456889999999999974


No 26 
>d1mp9a1 d.129.1.1 (A:5-96) TATA-box binding protein (TBP), C-terminal domain {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=46.71  E-value=2.3  Score=25.37  Aligned_cols=35  Identities=26%  Similarity=0.493  Sum_probs=24.4

Q ss_pred             CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccH
Q 035623          112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGI  147 (202)
Q Consensus       112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~  147 (202)
                      -+|+|+||-.- .-....+...++-|+.|.=.|.|-
T Consensus        36 ~~YePe~fpgl-i~R~~~p~~t~lIF~SGkivitGa   70 (92)
T d1mp9a1          36 VEYDPDQFPGL-IFRLESPKITSLIFKSGKMVVTGA   70 (92)
T ss_dssp             CBCCTTTCSSE-EEEETTTTEEEEECTTSEEEEECC
T ss_pred             CEECCccCceE-EEEECCCcEEEEEEcCCEEEEEcc
Confidence            36999998542 111233456889999999999984


No 27 
>d1qnaa2 d.129.1.1 (A:116-198) TATA-box binding protein (TBP), C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=44.20  E-value=2.2  Score=24.85  Aligned_cols=36  Identities=28%  Similarity=0.420  Sum_probs=24.6

Q ss_pred             CCCCCCCCCCCCCCCcCCCccceeccCCCCCCCccHH
Q 035623          112 DEFIPERFIGTDCVDFQGQHFQLLPFGSGRRICPGIS  148 (202)
Q Consensus       112 ~~f~p~R~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~  148 (202)
                      .+|+|++|-.- .-....+...++-|+.|.=.|.|-.
T Consensus        26 ~~YePe~fpgl-~~R~~~pk~~~lIF~SGkivitGak   61 (83)
T d1qnaa2          26 SSYEPELFPGL-IYRMKVPKIVLLIFVSGKIVITGAK   61 (83)
T ss_dssp             EECCTTTCSSE-EEEETTTTEEEEECTTSEEEEEEES
T ss_pred             cccChhhCCeE-EEEECCCCeEEEEEcCCEEEEECCC
Confidence            47888888532 1112234557899999999999864


No 28 
>d2gvia1 d.81.3.1 (A:1-168) Uncharacterized protein Ta1109 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=41.18  E-value=9.3  Score=25.25  Aligned_cols=20  Identities=30%  Similarity=0.404  Sum_probs=19.1

Q ss_pred             CCCccHHHHHHHHHHHHHHH
Q 035623          142 RICPGISMAMRTLELALANL  161 (202)
Q Consensus       142 ~~C~G~~la~~~~~~~l~~l  161 (202)
                      |.|||--++..+...++..|
T Consensus        18 H~CPgla~G~rm~~~Al~~L   37 (168)
T d2gvia1          18 HKCPYMPMGYRAGSYALKIA   37 (168)
T ss_dssp             SCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHc
Confidence            89999999999999999987


No 29 
>d1mo6a2 d.48.1.1 (A:270-329) RecA protein, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=37.32  E-value=20  Score=19.22  Aligned_cols=22  Identities=9%  Similarity=0.232  Sum_probs=18.2

Q ss_pred             HHHHHhhChHHHHHHHHHHHHh
Q 035623           17 SMTNLMRNPATMKKAQEEVRSV   38 (202)
Q Consensus        17 ~~~~l~~~p~~~~~l~~Ei~~~   38 (202)
                      +..+|..||++.++|.++|.+.
T Consensus        37 a~~~L~enpel~~eie~~ir~~   58 (60)
T d1mo6a2          37 ARNFLVENADVADEIEKKIKEK   58 (60)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCHHHHHHHHHHHHHH
Confidence            5567889999999999888764


No 30 
>d1xp8a2 d.48.1.1 (A:283-341) RecA protein, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=32.32  E-value=28  Score=18.51  Aligned_cols=23  Identities=9%  Similarity=0.286  Sum_probs=18.3

Q ss_pred             HHHHHhhChHHHHHHHHHHHHhh
Q 035623           17 SMTNLMRNPATMKKAQEEVRSVA   39 (202)
Q Consensus        17 ~~~~l~~~p~~~~~l~~Ei~~~~   39 (202)
                      +..+|..||++.+.|.+++.+.+
T Consensus        36 a~~~L~enpel~~eie~~i~~~l   58 (59)
T d1xp8a2          36 TIAYIAERPEMEQEIRDRVMAAI   58 (59)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCHHHHHHHHHHHHHHh
Confidence            45678899999999988887653


No 31 
>d2glza1 d.81.3.1 (A:3-151) FwdE-like protein DSY1837 (Dhaf_2201) {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=28.84  E-value=19  Score=23.26  Aligned_cols=20  Identities=30%  Similarity=0.665  Sum_probs=17.6

Q ss_pred             CCCccHHHHHHHHHHHHHHH
Q 035623          142 RICPGISMAMRTLELALANL  161 (202)
Q Consensus       142 ~~C~G~~la~~~~~~~l~~l  161 (202)
                      |.|||-.++..+...++..|
T Consensus        15 H~CpGl~iG~r~~~~a~~~l   34 (149)
T d2glza1          15 HTCPDIALGYRIAQLAQREM   34 (149)
T ss_dssp             SCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHc
Confidence            89999999998888877776


No 32 
>d1u94a2 d.48.1.1 (A:269-328) RecA protein, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.69  E-value=39  Score=17.92  Aligned_cols=22  Identities=32%  Similarity=0.468  Sum_probs=17.8

Q ss_pred             HHHHHhhChHHHHHHHHHHHHh
Q 035623           17 SMTNLMRNPATMKKAQEEVRSV   38 (202)
Q Consensus        17 ~~~~l~~~p~~~~~l~~Ei~~~   38 (202)
                      +..+|..||++.++|.+.|.+.
T Consensus        37 ~~~~L~enpel~~eie~~ire~   58 (60)
T d1u94a2          37 ATAWLKDNPETAKEIEKKVREL   58 (60)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCHHHHHHHHHHHHHH
Confidence            5567889999999998887654


No 33 
>d1nrja_ d.110.4.4 (A:) Srx domain of the signal recognition particle receptor alpha-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.39  E-value=6.8  Score=25.11  Aligned_cols=24  Identities=13%  Similarity=0.177  Sum_probs=21.8

Q ss_pred             CCCccHHHHHHHHHHHHHHHHhhc
Q 035623          142 RICPGISMAMRTLELALANLLYKF  165 (202)
Q Consensus       142 ~~C~G~~la~~~~~~~l~~ll~~f  165 (202)
                      -.|.|+.||...+-.++.+|+..-
T Consensus        18 yN~l~kKfsE~qiN~fIShLissP   41 (155)
T d1nrja_          18 YNCLGKKFSEIQINSFISQLITSP   41 (155)
T ss_dssp             EETTSCCCCHHHHHHHHHHHHHSC
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            479999999999999999999864


No 34 
>d1ev0a_ d.71.1.1 (A:) Cell division protein MinE topological specificity domain {Escherichia coli [TaxId: 562]}
Probab=20.11  E-value=15  Score=19.58  Aligned_cols=19  Identities=11%  Similarity=0.261  Sum_probs=15.1

Q ss_pred             hChHHHHHHHHHHHHhhcC
Q 035623           23 RNPATMKKAQEEVRSVAKN   41 (202)
Q Consensus        23 ~~p~~~~~l~~Ei~~~~~~   41 (202)
                      ..|++..++++||-++.++
T Consensus         4 ~~PDyLp~Lq~eil~VI~K   22 (58)
T d1ev0a_           4 AEPHYLPQLRKDILEVICK   22 (58)
T ss_dssp             GTTSSHHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHH
Confidence            4688889999998888654


Done!