BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035625
(954 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZP54|PARP1_ARATH Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1
PE=1 SV=2
Length = 983
Score = 1363 bits (3529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/992 (68%), Positives = 795/992 (80%), Gaps = 47/992 (4%)
Query: 1 MANPPKPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKA 60
MA+P KPW+ EYAKS RSSC++CKS I KE RLGK+VQS+ FDG MPMWNHASC+L+K
Sbjct: 1 MASPHKPWRAEYAKSSRSSCKTCKSVINKENFRLGKLVQSTHFDGIMPMWNHASCILKKT 60
Query: 61 NQIKSLDDVEGIESLRWEDQQKIRKYVEEGVGSGSSSK--------SNVTAAEYGIEVSQ 112
QIKS+DDVEGIESLRWEDQQKIRKYVE G GS +S+ +N EYGIEVSQ
Sbjct: 61 KQIKSVDDVEGIESLRWEDQQKIRKYVESGAGSNTSTSTGTSTSSTANNAKLEYGIEVSQ 120
Query: 113 TSRATCRHCSKKIMKGEVRISAKPDGQGTKGLAWHHANCFLDLSPSTQVEKLSGWGNLTV 172
TSRA CR CS+KI+KGEVRI +KP+G G KGL WHHA CFL++S ST++E LSGW ++
Sbjct: 121 TSRAGCRKCSEKILKGEVRIFSKPEGPGNKGLMWHHAKCFLEMSSSTELESLSGWRSIPD 180
Query: 173 SDQGAV-----KALVNVPSTTKNGDVSTSRAASVASSNNLPDEHAS------DL------ 215
SDQ A+ KAL + T + SRA + ++++ +E + D+
Sbjct: 181 SDQEALLPLVKKALPAAKTETAEARQTNSRAGTKRKNDSVDNEKSKLAKSSFDMSTSGAL 240
Query: 216 -----ESKLEAQTKELWALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMF 270
E ++EAQTKELW LKDDLKK+VT+AELREMLE N Q + GSELDLRD CADGMMF
Sbjct: 241 QPCSKEKEMEAQTKELWDLKDDLKKYVTSAELREMLEVNEQSTRGSELDLRDKCADGMMF 300
Query: 271 GALGRCPICSGPLRYSGGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKW 330
G L CP+CSG L +SGG+YRC GY S WSKCS+ST +P+R+KGKWKIP+ET +Q+L+KW
Sbjct: 301 GPLALCPMCSGHLSFSGGLYRCHGYISEWSKCSHSTLDPDRIKGKWKIPDETENQFLLKW 360
Query: 331 FKSQRTKKPIRVLPPRTSNSPASSQASKSPCQSSKSENLGDLRVSFSRLPKESKCVSCCL 390
KSQ++ KP R+L P S + Q SK SS+SE L DL+VS + KE + +
Sbjct: 361 NKSQKSVKPKRILRPVLSGETSQGQGSKDATDSSRSERLADLKVSIAGNTKERQPWKKRI 420
Query: 391 INESAE--------TNCLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKLPFD 442
AE T+CLV+ G+ D DAEMRKAR+MKV IVREDYLVDCFK+Q+KLPFD
Sbjct: 421 EEAGAEFHANVKKGTSCLVVCGLTDIRDAEMRKARRMKVAIVREDYLVDCFKKQRKLPFD 480
Query: 443 LYKVEVVGESSSMVTIKVKGRSAVHEASGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSY 502
YK+E ES +VT+KVKGRSAVHEASG+Q+ HILEDG S+YNTTL+MSDLSTG+NSY
Sbjct: 481 KYKIEDTSES--LVTVKVKGRSAVHEASGLQEHCHILEDGNSIYNTTLSMSDLSTGINSY 538
Query: 503 YILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLEECSKEDAVCEFKRLFLEKTGNPWEAW 562
YILQIIQ+DKGSDCYVFRKWGRVGN+KIGG+K+EE SK DAV EFKRLFLEKTGN WE+W
Sbjct: 539 YILQIIQEDKGSDCYVFRKWGRVGNEKIGGNKVEEMSKSDAVHEFKRLFLEKTGNTWESW 598
Query: 563 EQKQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLAPALVELMKMLFNVE 622
EQK NFQK+PGK LP DYGVNKQV++K S LAP+L+ELMKMLF+VE
Sbjct: 599 EQKTNFQKQPGKFLPLDI-------DYGVNKQVAKKEPFQTSSNLAPSLIELMKMLFDVE 651
Query: 623 TYRAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNR 682
TYR+AMMEF+INMSEMPLGKLSK+NIQKGFEALTEIQ LL P++KESL++DASNR
Sbjct: 652 TYRSAMMEFEINMSEMPLGKLSKHNIQKGFEALTEIQRLLTESDPQPTMKESLLVDASNR 711
Query: 683 FFTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLCCDI 742
FFT+IPSIHPH+IRDEDDFKSKVKMLEALQDIEIASR+VGFDVDS +SLD+KYKKL CDI
Sbjct: 712 FFTMIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRIVGFDVDSTESLDDKYKKLHCDI 771
Query: 743 APLPHDSEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLL 802
+PLPHDSEDY+LIEKYL+ THAPTHT+WSLELEEVF+LEREGEFDK++ ++ KL N+MLL
Sbjct: 772 SPLPHDSEDYRLIEKYLNTTHAPTHTEWSLELEEVFALEREGEFDKYAPHREKLGNKMLL 831
Query: 803 WHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLML 862
WHGSRLTNFVGIL+QGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYC+T KKNPVGLML
Sbjct: 832 WHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTCKKNPVGLML 891
Query: 863 LSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNV 922
LSEV LGE++EL KAKYMDKPP GKHSTKGLGK VPQ+S+F KWR DVTVPCGKPV S V
Sbjct: 892 LSEVALGEIHELTKAKYMDKPPRGKHSTKGLGKKVPQDSEFAKWRGDVTVPCGKPVSSKV 951
Query: 923 RASELMYNEYIVYNTAQVKMQFLLKVRFHHKR 954
+ASELMYNEYIVY+TAQVK+QFLLKVRF HKR
Sbjct: 952 KASELMYNEYIVYDTAQVKLQFLLKVRFKHKR 983
>sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica
GN=PARP1 PE=2 SV=1
Length = 977
Score = 1245 bits (3222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1002 (62%), Positives = 749/1002 (74%), Gaps = 73/1002 (7%)
Query: 1 MANPPKPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKA 60
MA PPK WK EYAKSGRSSC+SC+S I K+ LRLGKMVQ++QFDG MPMWNHASC+L K
Sbjct: 1 MAAPPKAWKAEYAKSGRSSCKSCRSPIGKDQLRLGKMVQATQFDGLMPMWNHASCILSKK 60
Query: 61 NQIKSLDDVEGIESLRWEDQQKIRKYVEEGVGSGSSSKSNVTAAEYGIEVSQTSRATCRH 120
NQIKS+DDVEGI++LRW+DQ+KIR YV G ++S + + + IEV++++R +CR
Sbjct: 61 NQIKSVDDVEGIDTLRWDDQEKIRNYV--GSAPATASSAAAISDKCTIEVAKSARTSCRR 118
Query: 121 CSKKIMKGEVRISAKPDGQGTKGLAWHHANCFLDLSPSTQVEKLSGWGNLTVSDQGAVKA 180
C +KI KG VR+S+K +GQG W+HA+CFL++SP+ VE SGW L+ D+ AV
Sbjct: 119 CGEKIKKGTVRVSSKLEGQG-----WYHASCFLEMSPAATVENFSGWEILSHEDKRAVLD 173
Query: 181 LV--NVPST-----------TKNGDVSTSRAASVASS--------------NNLPDEHAS 213
LV + PS+ D+ +A + S ++ + ++S
Sbjct: 174 LVKKDAPSSGQTSSKGSKRKNNQNDIHDCKAPKIIRSISEGTAEDKGKAVVSHDSNANSS 233
Query: 214 DLESKLEAQTKELWALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGAL 273
DL+ KL+ Q+ LW LKD+LKKHV+TAELR MLEANGQD++G E L D CADGM+FGAL
Sbjct: 234 DLQEKLKEQSDTLWKLKDELKKHVSTAELRNMLEANGQDTSGPERHLLDRCADGMLFGAL 293
Query: 274 GRCPICSGPLRYSGGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKS 333
G CP+CS L Y GG Y C GY S WSKC+YST EP R K KWKIP+E ++ YL KWFKS
Sbjct: 294 GTCPVCSSFLYYHGGQYHCSGYVSEWSKCTYSTTEPVRSKKKWKIPDEMDNGYLTKWFKS 353
Query: 334 QRTKKPIRVLPPRTSNSPASSQASKSPCQSSK------SENLGDLRVSF----------- 376
Q+ KKP RVLPP + KS CQS++ SE L LRVS
Sbjct: 354 QKAKKPERVLPPMS--------PEKSLCQSTQQNRSFLSEGLDKLRVSIVGQSKDVVDGW 405
Query: 377 -SRLPKESKCVSCCLINESAETNCLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKR 435
+L + + +S+ CLVL + +AE++KAR++K+PI+RE YL +C ++
Sbjct: 406 KQKLKDAGANFNATVTKDSS---CLVLCSELESENAEVKKARRLKIPILREGYLGECIRK 462
Query: 436 QKKLPFDLYKVEVVGESS--SMVTIKVKGRSAVHEASGMQDTGHILEDGKSVYNTTLNMS 493
+ LPFDLYKVE ESS +T+KVKGRSAVHE+SG+QDTGHILEDGKS+YNTTLNMS
Sbjct: 463 NRVLPFDLYKVEAALESSKGGTMTVKVKGRSAVHESSGLQDTGHILEDGKSIYNTTLNMS 522
Query: 494 DLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLEECSKEDAVCEFKRLFLE 553
DL+ GVNSYYILQ+I++D GSDCYVFRKWGRVGN+KIGG+KLEE SK A+ EF+RLFLE
Sbjct: 523 DLTRGVNSYYILQVIEEDNGSDCYVFRKWGRVGNEKIGGTKLEEMSKIHAIQEFRRLFLE 582
Query: 554 KTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLAPALVE 613
KTGNPWEAWEQK NFQK+PGK P DYGV + K S L P L+E
Sbjct: 583 KTGNPWEAWEQKTNFQKQPGKFYPLDI-------DYGVRQGPKRKDIDKMKSSLPPQLLE 635
Query: 614 LMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLL-NNGAYDPSVK 672
LM MLFN+ETYRAAM+EF INMSEMPLGKLSK NIQKGFEALTEIQNLL N + +V+
Sbjct: 636 LMNMLFNIETYRAAMLEFKINMSEMPLGKLSKENIQKGFEALTEIQNLLGNTNNQELAVR 695
Query: 673 ESLIIDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSDDSLD 732
ESLI+ ASNRFFT+IPSIHPH+I+DEDD KVKMLEALQDIEIAS+LVGFD D+D+SLD
Sbjct: 696 ESLIVAASNRFFTLIPSIHPHIIQDEDDLMVKVKMLEALQDIEIASKLVGFDSDNDESLD 755
Query: 733 EKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSY 792
+KYKKL C I PLPHD EDY+L+EKYL THAPTH +WSLELEEVFSL+R+GEF K+S Y
Sbjct: 756 DKYKKLRCAITPLPHDCEDYKLVEKYLLNTHAPTHKEWSLELEEVFSLDRDGEFSKYSRY 815
Query: 793 QRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFT 852
+ L N+MLLWHGSRLTN+VGILSQGLRIAPPEAP TGYMFGKG+YFADLVSKSAQYC+
Sbjct: 816 KNNLHNKMLLWHGSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYV 875
Query: 853 DKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTV 912
D+KNPVGLMLLSEV LG++YELKKA MDKPP GKHSTKGLGKTVP ES+F KWRDDV V
Sbjct: 876 DRKNPVGLMLLSEVALGDMYELKKATSMDKPPRGKHSTKGLGKTVPLESEFAKWRDDVVV 935
Query: 913 PCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHKR 954
PCGKPVP++++ SELMYNEYIVYNT+QVKMQ+LLKVRFHHKR
Sbjct: 936 PCGKPVPASIKTSELMYNEYIVYNTSQVKMQYLLKVRFHHKR 977
>sp|Q9ZSV1|PARP1_MAIZE Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1
Length = 980
Score = 1230 bits (3182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/991 (62%), Positives = 745/991 (75%), Gaps = 48/991 (4%)
Query: 1 MANPPKPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKA 60
MA PPK WK EYAKSGR+SC+SC+S I K+ LRLGKMVQ+SQFDGFMPMWNHA C+ K
Sbjct: 1 MAAPPKAWKAEYAKSGRASCKSCRSPIAKDQLRLGKMVQASQFDGFMPMWNHARCIFSKK 60
Query: 61 NQIKSLDDVEGIESLRWEDQQKIRKYVEEGVGSGSSSKSNVTAAEYGIEVSQTSRATCRH 120
NQIKS+DDVEGI++LRW+DQ+KIR YV G S +S + + IE++ ++R +CR
Sbjct: 61 NQIKSVDDVEGIDALRWDDQEKIRNYV--GSASAGTSSTAAPPEKCTIEIAPSARTSCRR 118
Query: 121 CSKKIMKGEVRISAKPDGQGTKGLAWHHANCFLDLSPSTQVEKLSGWGNLTVSDQGAVKA 180
CS+KI KG VR+SAK + +G KG+ W+HANCF ++SPS VEK SGW L+ D+ +
Sbjct: 119 CSEKITKGSVRLSAKLESEGPKGIPWYHANCFFEVSPSATVEKFSGWDTLSDEDKRTMLD 178
Query: 181 LV--NVPSTTKN---------GDVSTSRAA---------SVASSNNLPDEHAS-----DL 215
LV +V + +N D+ + ++A +V + L D S D+
Sbjct: 179 LVKKDVGNNEQNKGSKRKKSENDIDSYKSARLDESTSEGTVRNKGQLVDPRGSNTSSADI 238
Query: 216 ESKLEAQTKELWALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGR 275
+ KL+ Q+ LW LKD LK HV+ AELR+MLEANGQD++G E L D CADGM+FGALG
Sbjct: 239 QLKLKEQSDTLWKLKDGLKTHVSAAELRDMLEANGQDTSGPERHLLDRCADGMLFGALGP 298
Query: 276 CPICSGPLRYSGGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQR 335
CP+C+ + Y G Y+C G S WSKC+YS EP R+K KW+IP T + YL+KWFKSQ+
Sbjct: 299 CPVCANGMYYYNGQYQCSGNVSEWSKCTYSATEPVRVKKKWQIPHGTKNDYLMKWFKSQK 358
Query: 336 TKKPIRVLPPRTSNSPASSQASKSPCQSSKSENLGDLRVSFSRLPKES-----KCVSCCL 390
KKP RVLPP + S ++ SSK L LR S KE+ + +
Sbjct: 359 VKKPERVLPPMSPEKSGSKATQRTSLLSSK--GLDKLRFSVVGQSKEAANEWIEKLKLAG 416
Query: 391 INESA----ETNCLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKLPFDLYKV 446
N A + +CL+ G D+ +AE+RKAR++K+PIVRE Y+ +C K+ K LPFDLYK+
Sbjct: 417 ANFYARVVKDIDCLIACGELDNENAEVRKARRLKIPIVREGYIGECVKKNKMLPFDLYKL 476
Query: 447 EVVGESS--SMVTIKVKGRSAVHEASGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSYYI 504
E ESS S VT+KVKGRSAVHE+SG+QDT HILEDGKS+YN TLNMSDL+ GVNSYY+
Sbjct: 477 ENALESSKGSTVTVKVKGRSAVHESSGLQDTAHILEDGKSIYNATLNMSDLALGVNSYYV 536
Query: 505 LQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLEECSKEDAVCEFKRLFLEKTGNPWEAWEQ 564
LQII+ D GS+CYVFRKWGRVG++KIGG KLEE SK +A+ EFKRLFLEKTGN WEAWE
Sbjct: 537 LQIIEQDDGSECYVFRKWGRVGSEKIGGQKLEEMSKTEAIKEFKRLFLEKTGNSWEAWEC 596
Query: 565 KQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLAPALVELMKMLFNVETY 624
K NF+K+PG+ P DYGV K K ++ S LAP L+ELMKMLFNVETY
Sbjct: 597 KTNFRKQPGRFYPLDV-------DYGVKKAPKRKDISEMKSSLAPQLLELMKMLFNVETY 649
Query: 625 RAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDP-SVKESLIIDASNRF 683
RAAMMEF+INMSEMPLGKLSK NI+KGFEALTEIQNLL + A +V+ESLI+ ASNRF
Sbjct: 650 RAAMMEFEINMSEMPLGKLSKENIEKGFEALTEIQNLLKDTADQALAVRESLIVAASNRF 709
Query: 684 FTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLCCDIA 743
FT+IPSIHPH+IRDEDD K KMLEALQDIEIAS++VGFD DSD+SLD+KY KL CDI
Sbjct: 710 FTLIPSIHPHIIRDEDDLMIKAKMLEALQDIEIASKIVGFDSDSDESLDDKYMKLHCDIT 769
Query: 744 PLPHDSEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLW 803
PL HDSEDY+LIE+YL THAPTH DWSLELEEVFSL+R+GE +K+S Y+ L N+MLLW
Sbjct: 770 PLAHDSEDYKLIEQYLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLW 829
Query: 804 HGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLL 863
HGSRLTNFVGILSQGLRIAPPEAP TGYMFGKG+YFADLVSKSAQYC+ D+ NPVGLMLL
Sbjct: 830 HGSRLTNFVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRNNPVGLMLL 889
Query: 864 SEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVR 923
SEV LG++YELKKA MDKPP GKHSTKGLGKTVP ES+FVKWRDDV VPCGKPVPS++R
Sbjct: 890 SEVALGDMYELKKATSMDKPPRGKHSTKGLGKTVPLESEFVKWRDDVVVPCGKPVPSSIR 949
Query: 924 ASELMYNEYIVYNTAQVKMQFLLKVRFHHKR 954
+SELMYNEYIVYNT+QVKMQFLLKVRFHHKR
Sbjct: 950 SSELMYNEYIVYNTSQVKMQFLLKVRFHHKR 980
>sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4
Length = 1014
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/1028 (38%), Positives = 576/1028 (56%), Gaps = 104/1028 (10%)
Query: 6 KPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKS 65
K ++VEYAKSGR+SC+ C +I K++LR+ MVQS FDG +P W H SC + + I+
Sbjct: 7 KLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRH 66
Query: 66 LD-DVEGIESLRWEDQQKIRKYVEEGVGSGSS-----SKSNVTAAEYGIEVSQTSRATCR 119
D +V+G LRW+DQQK++K E G +G SK+ T ++ E ++++R+TC+
Sbjct: 67 PDVEVDGFSELRWDDQQKVKKTAEAGGVTGKGQDGIGSKAEKTLGDFAAEYAKSNRSTCK 126
Query: 120 HCSKKIMKGEVRISAKPDGQGTKGLA----WHHANCF------LDLSPSTQVEKLSGWGN 169
C +KI KG+VR+S K L W+H CF L P +L G+
Sbjct: 127 GCMEKIEKGQVRLSKKMVDPEKPQLGMIDRWYHPGCFVKNREELGFRPEYSASQLKGFSL 186
Query: 170 LTVSDQGAVK-ALVNVPSTTK-NGDVSTSRAASVASSNNLPDEHASDLESKLEAQTKELW 227
L D+ A+K L V S K GD + + S LE L+AQ +W
Sbjct: 187 LATEDKEALKKQLPGVKSEGKRKGDEVDGVDEVAKKKSKKEKDKDSKLEKALKAQNDLIW 246
Query: 228 ALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPLRYSG 287
+KD+LKK +T +L+E+L N Q E + D ADGM+FGAL C CSG L +
Sbjct: 247 NIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSGQLVFKS 306
Query: 288 GIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIRVLPPRT 347
Y C G +AW+KC T+ P R +W P+E + + K + KK R+ PP T
Sbjct: 307 DAYYCTGDVTAWTKCMVKTQTPNR--KEWVTPKEFRE---ISYLKKLKVKKQDRIFPPET 361
Query: 348 SNS-----PASSQASKSPCQSSKSEN--LGDLRV----SFSRLPKESKCVSCCLINESAE 396
S S P S+ ++ + SS S + L ++++ SR E K + L +
Sbjct: 362 SASVAATPPPSTASAPAAVNSSASADKPLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTG 421
Query: 397 TN-----CLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKL------------ 439
T C+ + + +M + ++ + +V ED+L D K L
Sbjct: 422 TANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDVSASTKSLQELFLAHILSPW 481
Query: 440 -------PFDL------------------YKVEVVGESSSMVTIKVKGRSAVHEASGMQD 474
P ++ K E + +S + + +KG +AV SG++
Sbjct: 482 GAEVKAEPVEVVAPRGKSGAALSKKSKGQVKEEGINKSEKRMKLTLKGGAAVDPDSGLEH 541
Query: 475 TGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSK 534
+ H+LE G V++ TL + D+ G NSYY LQ+++DDK + ++FR WGRVG IG +K
Sbjct: 542 SAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGT-VIGSNK 600
Query: 535 LEEC-SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNK 593
LE+ SKEDA+ F +L+ EKTGN W + +NF K P K P DYG ++
Sbjct: 601 LEQMPSKEDAIEHFMKLYEEKTGNAWHS----KNFTKYPKKFYPLEI-------DYGQDE 649
Query: 594 QVSEKIGTD--ADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKG 651
+ +K+ + S+L + +L+KM+F+VE+ + AM+E++I++ +MPLGKLSK IQ
Sbjct: 650 EAVKKLTVNPGTKSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAA 709
Query: 652 FEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPS----IHPHVIRDEDDFKSKVKM 707
+ L+E+Q ++ G+ D S I+D SNRF+T+IP P ++ + D ++KV+M
Sbjct: 710 YSILSEVQQAVSQGSSD-----SQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEM 764
Query: 708 LEALQDIEIASRLV--GFDVDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAP 765
L+ L DIE+A L+ G D S D +D Y+KL DI + DSE+ ++I KY+ THA
Sbjct: 765 LDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHAT 824
Query: 766 THTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPE 825
TH + LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GILSQGLRIAPPE
Sbjct: 825 THNAYDLEVIDIFKIEREGECQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLRIAPPE 883
Query: 826 APATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPD 885
AP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL EV LG +YELK A ++ K P
Sbjct: 884 APVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPK 943
Query: 886 GKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFL 945
GKHS KGLGKT P S + D V VP G + S V + L+YNEYIVY+ AQV +++L
Sbjct: 944 GKHSVKGLGKTTPDPSANISL-DGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYL 1002
Query: 946 LKVRFHHK 953
LK++F+ K
Sbjct: 1003 LKLKFNFK 1010
>sp|Q9R152|PARP1_CRIGR Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2
SV=3
Length = 1013
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/1026 (38%), Positives = 568/1026 (55%), Gaps = 105/1026 (10%)
Query: 8 WKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKSLD 67
++VEYAKSGR+SC+ C +I K++LR+ MVQS FDG +P W H SC + + I+ D
Sbjct: 9 YRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRQPD 68
Query: 68 -DVEGIESLRWEDQQKIRKYVEEGVGSG-----SSSKSNVTAAEYGIEVSQTSRATCRHC 121
+V+G LRW+DQQK++K E G +G S KS T ++ E ++++R+TC+ C
Sbjct: 69 VEVDGFSELRWDDQQKVKKTAEAGGVAGKGQDGSGGKSEKTLGDFAAEYAKSNRSTCKGC 128
Query: 122 SKKIMKGEVRISAKPDGQGTKGLA----WHHANCF------LDLSPSTQVEKLSGWGNLT 171
+KI KG+VR+S K L W+H CF L P +L G+ L+
Sbjct: 129 MEKIEKGQVRLSKKMLDPEKPQLGMIDRWYHPTCFVKNREELGFRPEYSASQLKGFSLLS 188
Query: 172 VSDQGAVK-ALVNVPSTTKNGDVSTSRAASVASSNNLPDEHASD-LESKLEAQTKELWAL 229
D+ +K L V S K A VA + + LE L+AQ +W +
Sbjct: 189 AEDKEVLKKQLPGVKSEGKRKGDEVDGADEVAKKKSKKGKDKDSKLEKALKAQNDLIWNI 248
Query: 230 KDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPLRYSGGI 289
KD+LKK +T++L+E+L N Q E + D ADGM FGAL C CSG L +
Sbjct: 249 KDELKKACSTSDLKELLIFNQQQVPSGESAILDRVADGMAFGALLPCKECSGQLVFKSDA 308
Query: 290 YRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIRVLPPRTSN 349
Y C G +AW+KC T+ P R +W P+E + + K + KK R+ PP TS
Sbjct: 309 YYCTGDVTAWTKCMVKTQTPSR--KEWVTPKEFRE---ISYLKKLKVKKQDRIFPPETS- 362
Query: 350 SPA----------------SSQASKSPCQSSKSENLGDLRVSFSRLPKESKCVSCCLINE 393
+PA SS + P + K LG L S + + L
Sbjct: 363 APAPPHLPPSVTSAPTAVNSSCPADKPLSNMKILTLGKLSQSKDEAKATIEKLGGKLTGS 422
Query: 394 SAETN-CLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKL------------- 439
+ + C+ + +M + + V +V ED+L D K L
Sbjct: 423 ANNASLCISTKKEVEKMGKKMEEVQAANVRVVCEDFLQDVAASTKSLQELLSAHSLSSWG 482
Query: 440 ------PFD-----------------LYKVEVVGESSSMVTIKVKGRSAVHEASGMQDTG 476
P + LYK E V +S + + +KG +AV SG++ +
Sbjct: 483 AEVKVEPVEVAAPKGKSAAPSKKSKGLYKEEGVNKSEKRMKLTLKGGAAVDPDSGLEHSA 542
Query: 477 HILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLE 536
H+LE G V++ TL + D+ G NSYY LQ+++DDK S ++FR WGRVG IG +KLE
Sbjct: 543 HVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVGT-VIGSNKLE 601
Query: 537 EC-SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNKQV 595
+ SKEDAV F +L+ EKTGN W + +NF K P K P DYG +++
Sbjct: 602 QMPSKEDAVEHFMKLYEEKTGNAWHS----KNFTKYPKKFYPLEI-------DYGQDEEA 650
Query: 596 SEKIGTD--ADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKGFE 653
+K+ S+L A+ EL+ M+F+VE+ + A++E++I++ +MPLGKLSK IQ +
Sbjct: 651 VKKLTVKPGTKSKLPKAVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSKRQIQAAYS 710
Query: 654 ALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPS----IHPHVIRDEDDFKSKVKMLE 709
L+E+Q ++ G+ D S I+D SNRF+T+IP P ++ + D ++KV+ML+
Sbjct: 711 ILSEVQQAVSQGSSD-----SQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD 765
Query: 710 ALQDIEIASRLV--GFDVDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAPTH 767
L DIE+A L+ G D S D +D Y+KL DI + DSE+ ++I KY+ THA TH
Sbjct: 766 NLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTH 825
Query: 768 TDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAP 827
+ LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GILSQGLRIAPPEAP
Sbjct: 826 NAYDLEVMDIFKIEREGESQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAP 884
Query: 828 ATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGK 887
TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL EV LG +YELK A ++ K P GK
Sbjct: 885 VTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGK 944
Query: 888 HSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLK 947
HS KGLGKT P S + + V VP G +PS V + L+YNEYIVY+ AQV +++LLK
Sbjct: 945 HSVKGLGKTTPDPSASITL-EGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLK 1003
Query: 948 VRFHHK 953
++F+ K
Sbjct: 1004 LKFNFK 1009
>sp|P11103|PARP1_MOUSE Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3
Length = 1013
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/1028 (37%), Positives = 581/1028 (56%), Gaps = 109/1028 (10%)
Query: 8 WKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKSLD 67
++V+YAKSGR+SC+ C +I K++LR+ MVQS FDG +P W H SC + I+ D
Sbjct: 9 YRVQYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGQSIRHPD 68
Query: 68 -DVEGIESLRWEDQQKIRKYVEEGVGSG-----SSSKSNVTAAEYGIEVSQTSRATCRHC 121
+V+G LRW+DQQK++K E G +G S K+ T ++ E ++++R+ C+ C
Sbjct: 69 VEVDGFSELRWDDQQKVKKTAEAGGVAGKGQDGSGGKAEKTLGDFAAEYAKSNRSMCKGC 128
Query: 122 SKKIMKGEVRISAKPDGQGTKGLA----WHHANCF------LDLSPSTQVEKLSGWGNLT 171
+KI KG++R+S K L W+H CF L P +L G+ L+
Sbjct: 129 LEKIEKGQMRLSKKMVDPEKPQLGMIDRWYHPTCFVKKRDELGFRPEYSASQLKGFSLLS 188
Query: 172 VSDQGAVKALVNVPSTTKNG-----DVSTSRAASVASSNNLPDEHASDLESKLEAQTKEL 226
D+ A+K +P+ G +V + + S D++ S LE L+AQ + +
Sbjct: 189 AEDKEALKK--QLPAIKNEGKRKGDEVDGTDEVAKKKSRKETDKY-SKLEKALKAQNELI 245
Query: 227 WALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPLRYS 286
W +KD+LKK +T +L+E+L N Q E + D ADGM FGAL C CSG L +
Sbjct: 246 WNIKDELKKACSTNDLKELLIFNQQQVPSGESAILDRVADGMAFGALLPCKECSGQLVFK 305
Query: 287 GGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIRVLPPR 346
Y C G +AW+KC T+ P R +W P+E + + K + KK R+ PP
Sbjct: 306 SDAYYCTGDVTAWTKCMVKTQNPSR--KEWVTPKEFRE---ISYLKKLKVKKQDRIFPPE 360
Query: 347 TS-----NSPASSQASKSPCQSSKSEN--LGDLRV----SFSRLPKESKCVSCCL---IN 392
+S + P S ++ + SS + L ++++ S+ E+K V L +
Sbjct: 361 SSAPITVHWPLSVTSAPTAVNSSAPADKPLSNMKILTLGKLSQNKDEAKAVIEKLGGKLT 420
Query: 393 ESAE--TNCLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKL----------- 439
SA + C+ + + + +M + ++ + +V ED+L D K L
Sbjct: 421 GSANKASLCISIKKEVEKMNKKMEEVKEANIRVVSEDFLQDVSASTKSLQDLLSAHSLSP 480
Query: 440 --------PFDL-----------------YKVEVVGESSSMVTIKVKGRSAVHEASGMQD 474
P ++ +K E V +S + + +KG +AV SG++
Sbjct: 481 WGAEVKAEPGEVVAPRGKSAAPSKKSKGCFKEEGVNKSEKRMKLTLKGGAAVDPDSGLEH 540
Query: 475 TGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSK 534
+ H+LE G V++ TL + D+ G NSYY LQ+++DDK S ++FR WGR+G IG +K
Sbjct: 541 SAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRLGT-VIGSNK 599
Query: 535 LEEC-SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNK 593
LE+ SKE+AV +F +L+ EKTGN W + +NF K P K P DYG ++
Sbjct: 600 LEQMPSKEEAVEQFMKLYEEKTGNAWHS----KNFTKYPKKFYPLEI-------DYGQDE 648
Query: 594 QVSEKIGTD--ADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKG 651
+ +K+ S+L + EL+ M+F+V++ + A++E++I++ +MPLGKLS+ IQ
Sbjct: 649 EAVKKLTVKPGTKSKLPKPVQELVGMIFDVDSMKKALVEYEIDLQKMPLGKLSRRQIQAA 708
Query: 652 FEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPS----IHPHVIRDEDDFKSKVKM 707
+ L+E+Q ++ G+ ES I+D SNRF+T+IP P ++ + D ++KV+M
Sbjct: 709 YSILSEVQQPVSQGS-----SESQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEM 763
Query: 708 LEALQDIEIASRLV--GFDVDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAP 765
L+ L DIE+A L+ G D S D +D Y+KL DI + DSE+ ++I KY+ THA
Sbjct: 764 LDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHAT 823
Query: 766 THTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPE 825
TH + LE+ ++F +EREGE ++ + R+L NR LLWHGSR TNF GILSQGLRIAPPE
Sbjct: 824 THNAYDLEVIDIFKIEREGESQRYKPF-RQLHNRRLLWHGSRTTNFAGILSQGLRIAPPE 882
Query: 826 APATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPD 885
AP TGYMFGKGIYFAD+VSKSA YC T + +P+GL++L EV LG +YELK A ++ K P
Sbjct: 883 APVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLIMLGEVALGNMYELKHASHISKLPK 942
Query: 886 GKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFL 945
GKHS KGLGKT P S + + V VP G +PS V + L+YNEYIVY+ AQV +++L
Sbjct: 943 GKHSVKGLGKTTPDPSASITL-EGVEVPLGTGIPSGVNDTALLYNEYIVYDIAQVNLKYL 1001
Query: 946 LKVRFHHK 953
LK++F+ K
Sbjct: 1002 LKLKFNFK 1009
>sp|P18493|PARP1_BOVIN Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2
Length = 1016
Score = 635 bits (1637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/1033 (37%), Positives = 568/1033 (54%), Gaps = 112/1033 (10%)
Query: 6 KPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKS 65
K ++VEYAKSGR+SC+ CK +I K+++R+ MV+S FDG +P W H SC + I
Sbjct: 7 KLYRVEYAKSGRASCKKCKESIPKDSIRMAFMVESPMFDGKIPHWYHLSCFWKVGFSIWH 66
Query: 66 LD-DVEGIESLRWEDQQKIRKYVEEGVGS--------GSSSKSNVTAAEYGIEVSQTSRA 116
D +VEG LRW+DQQ I+K E G + G SK+ T ++G ++++R+
Sbjct: 67 PDVEVEGFSELRWDDQQTIKKMAETGGRTDVSGKGQDGVGSKTEKTLIDFGAGYAKSNRS 126
Query: 117 TCRHCSKKIMKGEVRISAK---PDGQGTKGLA--WHHANCF------LDLSPSTQVEKLS 165
TC+ C +KI KG+VR+S K PD + G+ W+H CF L P L
Sbjct: 127 TCKSCMEKIDKGQVRLSKKVVYPD-KPQLGMVDCWYHPKCFVQKREELGFRPEFSATHLM 185
Query: 166 GWGNLTVSDQGAVKALVNVPSTT----KNGDVSTSRAASVASSNNLPDEHASDLESKLEA 221
G+ LT DQ +K +P+ + GD + + LE L+A
Sbjct: 186 GFSVLTAEDQETLKK--QLPAIKGERKRKGDEVDGIDEVTKKKSKKEKDKEIKLEKALKA 243
Query: 222 QTKELWALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSG 281
Q +W +KD+LKK +T +L+E+L N Q+ E + D ADGM+FGAL C CSG
Sbjct: 244 QNDLIWNVKDELKKACSTNDLKELLIFNKQEVPSGESAILDRVADGMVFGALLPCEECSG 303
Query: 282 PLRYSGGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIR 341
L + G Y C G +AW+KC T+ P R +W P+E + +FK + KK R
Sbjct: 304 QLVFKGDAYYCTGDVTAWTKCMVKTQTPNR--KEWVTPKEFRE---ISYFKKLKIKKQDR 358
Query: 342 VLPPRTSN--------------SPASSQASKSPCQSSKSENLGDLRVSFSRLPKESKCVS 387
+ PP +S + S P + K LG L + + + +
Sbjct: 359 IFPPESSTPVGAAAPPSAASAPAAVHSGPPDKPLSNMKILTLGKLSQNKDEVKATIEKLG 418
Query: 388 CCLINESAETN-CLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKL------- 439
L + + + C+ D + +M + ++ + +V ED+L D K L
Sbjct: 419 GKLTGTANKASLCISTKKEVDKLNKKMEEVKEANIRVVSEDFLQDISASTKSLQELLSTH 478
Query: 440 -------PFDLYKVEVVG-----------------------ESSSMVTIKVKGRSAVHEA 469
+ VE VG +S + + +KG +AV
Sbjct: 479 LLSPWGAEVKVEPVEAVGPKGKSGAAPSKKSKGPVKEEGTNKSEKRMKLTLKGGAAVDPD 538
Query: 470 SGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDK 529
SG++ H+LE G V++ TL + D+ G NSYY LQ+++DDK S ++FR WGRVG
Sbjct: 539 SGLEHNAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVGT-V 597
Query: 530 IGGSKLEEC-SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSD 588
IG +KLE+ SKEDA+ F +L+ EKTGN W + +NF K P K P D
Sbjct: 598 IGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHS----KNFTKHPKKFYPLEI-------D 646
Query: 589 YGVNKQVSEKIGTD--ADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKN 646
YG +++ +K+ + S+L + L+KM+F+VE+ + AM+E++I++ +MPLGKLSK
Sbjct: 647 YGQDEEAVKKLTVNPGTKSKLPKPVQNLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKR 706
Query: 647 NIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPS----IHPHVIRDEDDFK 702
IQ + L+E+Q L+ G+ D S I+D SNRF+T+IP P ++ + + +
Sbjct: 707 QIQAAYSILSEVQQALSQGSSD-----SHILDLSNRFYTLIPHDFGMKKPPLLNNANSVQ 761
Query: 703 SKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYLH 760
+KV+ML+ L DIE+A L+ G D S D +D Y+KL DI + DSE+ ++I KY+
Sbjct: 762 AKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDKDSEEAEIIRKYVK 821
Query: 761 ATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLR 820
THA TH + LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GILSQGLR
Sbjct: 822 NTHATTHNAYDLEVVDIFKIEREGESQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLR 880
Query: 821 IAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYM 880
IAPPEAP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL E LG +YELK A+++
Sbjct: 881 IAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEAALGNMYELKHARHI 940
Query: 881 DKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQV 940
K P GKHS KGLGKT P S + D V VP G + S V + L+YNEYIVY+ AQV
Sbjct: 941 SKLPKGKHSVKGLGKTTPDPSASIT-VDGVEVPLGTGISSGVNDTCLLYNEYIVYDIAQV 999
Query: 941 KMQFLLKVRFHHK 953
+++LLK++F+ K
Sbjct: 1000 HLKYLLKLKFNFK 1012
>sp|P27008|PARP1_RAT Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=1
SV=4
Length = 1014
Score = 622 bits (1604), Expect = e-177, Method: Compositional matrix adjust.
Identities = 387/1028 (37%), Positives = 565/1028 (54%), Gaps = 108/1028 (10%)
Query: 8 WKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKSLD 67
++VEYAKSGR+SC+ C +I K++LR+ MVQS FDG +P W H SC + + I+ D
Sbjct: 9 YRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRQPD 68
Query: 68 -DVEGIESLRWEDQQKIRKYVEEGVGSGSSSKSNVTAAE-----YGIEVSQTSRATCRHC 121
+V+G LRW+DQQK++K E G +G AE + E ++++R+TC+ C
Sbjct: 69 TEVDGFSELRWDDQQKVKKTAEAGGVAGKGQHGGGGKAEKTLGDFAAEYAKSNRSTCKGC 128
Query: 122 SKKIMKGEVRISAKPDGQGTKGLA----WHHANCF------LDLSPSTQVEKLSGWGNLT 171
+KI KG++R+S K L W+H CF L P +L G+ L+
Sbjct: 129 MEKIEKGQMRLSKKMLDPEKPQLGMIDRWYHPTCFVKNRDELGFRPEYSASQLKGFSLLS 188
Query: 172 VSDQGAVKALVNVPSTTKNG-----DVSTSRAASVASSNNLPDEHASDLESKLEAQTKEL 226
D+ A+K +P+ G +V + S D+ +S LE L+AQ + +
Sbjct: 189 AEDKEALKK--QLPAVKSEGKRKCDEVDGIDEVAKKKSKKGKDKESSKLEKALKAQNELV 246
Query: 227 WALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPLRYS 286
W +KD+LKK +T +L+E+L N Q E + D ADGM FGAL C CSG L +
Sbjct: 247 WNIKDELKKACSTNDLKELLIFNQQQVPSGESAILDRVADGMAFGALLPCKECSGQLVFK 306
Query: 287 GGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIRVL--- 343
Y C G +AW+KC T+ P R +W P+E + + K + KK R+
Sbjct: 307 SDAYYCTGDVTAWTKCMVKTQNPSR--KEWVTPKEFRE---ISYLKKLKIKKQDRLFPPE 361
Query: 344 ---------PPRTSNSPA---SSQASKSPCQSSKSENLGDLRVSFSRLPKESKCVSCCLI 391
P +++P SS + P + K LG L + + + L
Sbjct: 362 SSAPAPPAPPVSITSAPTAVNSSAPADKPLSNMKILTLGKLSQNKDEAKAMIEKLGGKLT 421
Query: 392 NESAETN-CLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKL----------- 439
+ + + C+ + +M + + V +V ED+L D K L
Sbjct: 422 GSANKASLCISTKKEVEKMSKKMEEVKAANVRVVCEDFLQDVSASAKSLQELLSAHSLSS 481
Query: 440 --------PFDL-----------------YKVEVVGESSSMVTIKVKGRSAVHEASGMQD 474
P ++ K E V +S + + +KG +AV SG++
Sbjct: 482 WGAEVKVEPGEVVVPKGKSAAPSKKSKGAVKEEGVNKSEKRMKLTLKGGAAVDPDSGLEH 541
Query: 475 TGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSK 534
+ H+LE G V++ TL + D+ G NSYY LQ+++ DK S ++FR WGRVG IG +K
Sbjct: 542 SAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLESDKESRYWIFRSWGRVGT-VIGSNK 600
Query: 535 LEEC-SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNK 593
LE+ SKEDAV F +L+ EKTGN W + +NF K P K P DYG ++
Sbjct: 601 LEQMPSKEDAVEHFMKLYEEKTGNAWHS----KNFTKYPKKFYPLEI-------DYGQDE 649
Query: 594 QVSEKIGTD--ADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKG 651
+ +K+ S+L + EL+ M+F+VE+ + A++E++I++ +MPLGKLS+ IQ
Sbjct: 650 EAVKKLAVKPGTKSKLPKPVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSRRQIQAA 709
Query: 652 FEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPS----IHPHVIRDEDDFKSKVKM 707
+ L+E+Q ++ G+ ES I+D SNRF+T+IP P ++ + D ++KV+M
Sbjct: 710 YSILSEVQQAVSQGS-----SESQILDLSNRFYTLIPHDFGMKKPPLLNNTDSVQAKVEM 764
Query: 708 LEALQDIEIASRLV--GFDVDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAP 765
L+ L DIE+A L+ G D S D +D Y+KL DI + DSE+ ++I KY+ THA
Sbjct: 765 LDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHAT 824
Query: 766 THTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPE 825
TH + LE+ ++F +EREGE ++ + R+L NR LLWHGSR TNF GILSQGLRIAPPE
Sbjct: 825 THNAYDLEVIDIFKIEREGESQRYKPF-RQLHNRRLLWHGSRTTNFAGILSQGLRIAPPE 883
Query: 826 APATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPD 885
AP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL EV LG +YELK A ++ K P
Sbjct: 884 APVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPK 943
Query: 886 GKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFL 945
GKHS KGLGKT P S + D V VP G +PS V + L+YNEYIVY+ AQV +++L
Sbjct: 944 GKHSVKGLGKTAPDPSASITL-DGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYL 1002
Query: 946 LKVRFHHK 953
LK++F+ K
Sbjct: 1003 LKLKFNFK 1010
>sp|P26446|PARP1_CHICK Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2
Length = 1011
Score = 620 bits (1600), Expect = e-176, Method: Compositional matrix adjust.
Identities = 392/1034 (37%), Positives = 572/1034 (55%), Gaps = 119/1034 (11%)
Query: 6 KPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKS 65
KP++ EYAKSGR+SC+ C +I K++LRL MVQS FDG +P W+H SC ++A +I S
Sbjct: 7 KPYRAEYAKSGRASCKKCGESIAKDSLRLALMVQSPMFDGKVPHWHHYSCFWKRA-RIVS 65
Query: 66 LDDVEGIESLRWEDQQKIRKYVEEGV--GSGSSSKSNVTAAE-----YGIEVSQTSRATC 118
D++G LRWEDQ+KI+K +E G ++ V AE + E ++++R+TC
Sbjct: 66 HTDIDGFPELRWEDQEKIKKAIETGALQEEKGGTRKEVGKAEKSLTDFAAEYAKSNRSTC 125
Query: 119 RHCSKKIMKGEVRISAKPDGQGTKGLA----WHHANCF------LDLSPSTQVEKLSGWG 168
+ C +KI KG++RIS K L W+H +CF L P+ +L G+
Sbjct: 126 KGCEQKIEKGQIRISKKMVHPEKPQLGMIDNWYHPDCFVSRRAELGFLPAYGATQLLGFS 185
Query: 169 NLTVSDQGAVKALVNVPSTTKNG-----DVSTSRAASVASSNNLPDEHASDLESKLEAQT 223
L D+ +K +P+T G +V + A S E S E +L+ QT
Sbjct: 186 ILKAEDKETLKK--QLPATKTEGKRKGEEVDGNVVAKKKSRKE--KEKESKQEKQLKEQT 241
Query: 224 KELWALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPL 283
+ +W +KD+L+K +T +L+E+L AN Q+ E + D ADGM FGAL C C G
Sbjct: 242 ELIWGIKDELRKVCSTNDLKELLIANKQEVPSGENAILDRVADGMAFGALLPCEECKGQF 301
Query: 284 RYSGGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIRVL 343
+ Y C G +AW+KC T+ P R W IP+E + + K + KK R+
Sbjct: 302 VFKSDAYYCSGDITAWTKCVAKTQTPNR--KDWVIPKEFRE---IPYLKKFKCKKQDRIF 356
Query: 344 PPRTSN-------------SPASSQASKSPCQSSKSENLGDLRVSFSRLPKESKCVSCCL 390
PP + + + P + K LG L S+ +E K + L
Sbjct: 357 PPEAATVNSAPPPPASAPLTETVTAPQDKPLTNMKILTLGKL----SKNKEEVKNIVEEL 412
Query: 391 -----INESAETNCLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQK-------- 437
+ T C+ + +M + + KV +V E++L D K
Sbjct: 413 GGKMTTTANKATLCISTQKEVEKMSKKMEEVKDAKVRVVSEEFLKDVKSSNKGFQELLSL 472
Query: 438 --------KLPFDLYKVEVVGESSSMVTIK---------------------VKGRSAVHE 468
++ + +V V G+ S +K VKG +AV
Sbjct: 473 HAISPWGAEVKTEHQEVAVDGKCSKPANMKSAGKVKEEQGPSKSEKKMKLTVKGGAAVDP 532
Query: 469 ASGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGND 528
SG++D+ H+ E G +++ TL + D+ G NSYY LQ+++DD+ S +VFR WGRVG
Sbjct: 533 DSGLEDSAHVFEKGGKIFSATLGLVDIVKGTNSYYKLQLLEDDRESRYWVFRSWGRVGT- 591
Query: 529 KIGGSKLEEC-SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLS 587
IG +KLE+ SKEDAV F L+ EKTGN W + +NF K P K P
Sbjct: 592 VIGSNKLEQMPSKEDAVEHFLNLYEEKTGNSWHS----KNFTKYPKKFYPLEI------- 640
Query: 588 DYGVNKQVSEKIGTDA--DSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSK 645
DYG +++ K+ A S+LA + +L+KM+F+VE+ + AM+EF+I++ +MPLGKLSK
Sbjct: 641 DYGQDEEAVRKLTVSAGTKSKLAKPIQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSK 700
Query: 646 NNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPS----IHPHVIRDEDDF 701
IQ + L E+Q +++G ES I+D SNRF+T+IP P ++ + +
Sbjct: 701 RQIQSAYSILNEVQQAVSDGG-----SESQILDLSNRFYTLIPHDFGMKKPPLLSNLEYI 755
Query: 702 KSKVKMLEALQDIEIA-SRLVGFDVDSD-DSLDEKYKKLCCDIAPLPHDSEDYQLIEKYL 759
++KV+ML+ L DIE+A S L G + D D D +D Y+KL DI + DSE+ ++I++Y+
Sbjct: 756 QAKVQMLDNLLDIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKIIKQYV 815
Query: 760 HATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGL 819
THA TH + L++ E+F +EREGE ++ + ++L NR LLWHGSR TNF GILSQGL
Sbjct: 816 KNTHAATHNAYDLKVVEIFRIEREGESQRYKPF-KQLHNRQLLWHGSRTTNFAGILSQGL 874
Query: 820 RIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKY 879
RIAPPEAP TGYMFGKGIYFAD+VSKSA YC T + +P+GL+LL EV LG +YELK A +
Sbjct: 875 RIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQADPIGLILLGEVALGNMYELKNASH 934
Query: 880 MDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQ 939
+ K P GKHS KGLGKT P + D V VP G + + + + L+YNEYIVY+ AQ
Sbjct: 935 ITKLPKGKHSVKGLGKTAPDPTATTTL-DGVEVPLGNGISTGINDTCLLYNEYIVYDVAQ 993
Query: 940 VKMQFLLKVRFHHK 953
V +++LLK++F++K
Sbjct: 994 VNLKYLLKLKFNYK 1007
>sp|P31669|PARP1_XENLA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis
GN=parp1 PE=2 SV=1
Length = 998
Score = 607 bits (1565), Expect = e-172, Method: Compositional matrix adjust.
Identities = 385/1020 (37%), Positives = 564/1020 (55%), Gaps = 106/1020 (10%)
Query: 13 AKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKSLDDVEGI 72
AKSGR+SC+ C NI KE+L L MVQS FDG +P W+H SC ++A ++ S D+ G
Sbjct: 1 AKSGRASCKKCGDNIAKESLGLAIMVQSPMFDGKVPHWHHYSCFWKRA-RVLSQGDIYGY 59
Query: 73 ESLRWEDQQKIRKYVE------EGVGSGSSSKSNVTAAEYGIEVSQTSRATCRHCSKKIM 126
LRWEDQ+ I+K +E G K +T ++ E ++++R+ C+ C +KI
Sbjct: 60 TELRWEDQEMIKKAIETGGAAAGAGGDSKGGKGEMTLNDFAAEYAKSNRSACKGCEQKIE 119
Query: 127 KGEVRISAKPDGQGTKGLA----WHHANCF------LDLSPSTQVEKLSGWGNLTVSDQG 176
KG++RIS K L W+H +CF LD PS +L G+ L+ D+
Sbjct: 120 KGQIRISKKSVDVERPQLGMIDRWYHPDCFVSSREELDFLPSYSASQLKGFTILSAEDKD 179
Query: 177 AVKALVNVPSTTKNG----DVSTSRAASVASSNNLPDEHASDLESKLEAQTKELWALKDD 232
++K +P+ G D +A+ E S LE L+ QT+ +W +KD+
Sbjct: 180 SLKK--KLPAVKNEGKRKADEVDGHSAATKKKIKKEKEKESKLEKLLKEQTELIWHIKDE 237
Query: 233 LKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPLRYSGGIYRC 292
LKK +T +L+E+L AN Q E ++ D +DGM FGAL C CSG + G Y C
Sbjct: 238 LKKVCSTNDLKELLIANKQQVPSGETNIVDRVSDGMAFGALLPCEECSGQFVFKGDAYYC 297
Query: 293 RGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIRVLPPRTSNSPA 352
G SAW+KC T+ P R W P+E + +K FK +R R PP + +P
Sbjct: 298 TGDLSAWTKCVAKTQTPNR--KDWVTPKEFHEIPYLKKFKFKRHD---RAFPPCAAPTPI 352
Query: 353 SSQASKS-------------PCQSSKSENLGDLRVSFSRLPKESKCVSCCLINESAETN- 398
S A+ P ++K +G L + + + + + + + N
Sbjct: 353 SPPAAPEPKPTVEETFPEGKPLTNTKVLLIGKLSKNKDEVKTLIEGLGGKVAGSAHKANL 412
Query: 399 CLVLGGVPDDPDAEMRKARKMKVPIVREDYL--VDCFKRQKKL--PFDL------YKVEV 448
C+ +M + + V +V +D+L V+ K ++L F + K E
Sbjct: 413 CISTNKEVKKMSKKMEEVKAANVRVVSDDFLKEVESGKSVQELLSQFGISSWGAEIKQEA 472
Query: 449 V-------------GESSSMVT-------------IKVKGRSAVHEASGMQDTGHILEDG 482
V G+SS V + VKG +A+ S ++D+ H+LE G
Sbjct: 473 VQPTEKQPSSGPVAGKSSGKVKEEKGSNKSEKKMKLTVKGGAAIDPDSELEDSCHVLETG 532
Query: 483 KSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLEE-CSKE 541
+++ TL + D++ G NSYY LQ+I+ D+ S +VFR WGRVG IG KLEE SKE
Sbjct: 533 GKIFSATLGLVDITRGTNSYYKLQLIEHDRDSRYWVFRSWGRVGT-VIGSKKLEEMSSKE 591
Query: 542 DAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEK--I 599
DA+ F L+ +KTGN W + NF K P K P DYG + V +K +
Sbjct: 592 DAIEHFLNLYQDKTGNAWHS----PNFTKYPKKFYPLEI-------DYGQEEDVVKKLSV 640
Query: 600 GTDADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQ 659
G S+LA + EL+K++F+VE+ + AM+EF+I++ +MPLGKLSK IQ + L+++Q
Sbjct: 641 GAGTKSKLAKPVQELIKLIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILSQVQ 700
Query: 660 NLLNNGAYDPSVKESLIIDASNRFFTVIPS----IHPHVIRDEDDFKSKVKMLEALQDIE 715
A S+ E+ ++D SN+F+T+IP P ++ + + ++KV+ML+ L DIE
Sbjct: 701 Q-----AVSESLSEARLLDLSNQFYTLIPHDFGMKKPPLLNNLEYIQAKVQMLDNLLDIE 755
Query: 716 IASRLV--GFDVDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAPTHTDWSLE 773
+A L+ G D D +D KY+K+ DI + DSE+ ++I Y+ THA TH + LE
Sbjct: 756 VAYSLLRGGADDGEKDPIDVKYEKIKTDIKVVAKDSEESRIICDYVKNTHADTHNAYDLE 815
Query: 774 LEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMF 833
+ E+F ++REGE+ ++ + ++L NR LLWHGSR TNF GILSQGLRIAPPEAP TGYMF
Sbjct: 816 VLEIFKIDREGEYQRYKPF-KQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMF 874
Query: 834 GKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGL 893
GKGIYFAD+VSKSA YC +P+GL+LL EV LG ++ELK A + K P GKHS KGL
Sbjct: 875 GKGIYFADMVSKSANYCHAMPGSPIGLILLGEVALGNMHELKAASQITKLPKGKHSVKGL 934
Query: 894 GKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 953
G+T P S V+ D V VP GK +N+ + L+YNEYIVY+ AQV +++LLK++F++K
Sbjct: 935 GRTAPDPSATVQL-DGVDVPLGKGTSANISDTSLLYNEYIVYDIAQVNLKYLLKLKFNYK 993
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 8 WKVEYAKSGRSSCRSCKSNIEKEALRLGKM---VQSSQFDGFMPMWNHASCVLRKANQIK 64
+ EYAKS RS+C+ C+ IEK +R+ K V+ Q G + W H C + ++
Sbjct: 99 FAAEYAKSNRSACKGCEQKIEKGQIRISKKSVDVERPQL-GMIDRWYHPDCFVSSREELD 157
Query: 65 -----SLDDVEGIESLRWEDQQKIRK 85
S ++G L ED+ ++K
Sbjct: 158 FLPSYSASQLKGFTILSAEDKDSLKK 183
>sp|Q11208|PARP_SARPE Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1
Length = 996
Score = 560 bits (1442), Expect = e-158, Method: Compositional matrix adjust.
Identities = 353/1020 (34%), Positives = 549/1020 (53%), Gaps = 102/1020 (10%)
Query: 7 PWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKSL 66
P+KVEY+KS R+SC+ CK+ IE LR+ MVQS+ DG P W H C +K + S
Sbjct: 6 PFKVEYSKSSRASCKGCKNKIEAGILRIAAMVQSAFHDGKQPNWFHEQCFFQK-QRPTSA 64
Query: 67 DDVEGIESLRWEDQQKIRKYVEEG---VGSGSSSKS-------NVTAAEYGIEVSQTSRA 116
D+E E++R+EDQ++I+K ++ + +G S K N ++GIE +++ RA
Sbjct: 65 GDIENFENIRFEDQERIKKAIDNCTTVISAGGSKKGAKRSKGENNAIKDFGIEYAKSGRA 124
Query: 117 TCRHCSKKIMKGEVRI---------SAKPDGQGTKGLAWHHANCFLDLSPST----QVEK 163
+CR C +KI+K ++RI K GQ WHH CF L E
Sbjct: 125 SCRGCEQKILKDQIRIRKTVFDTEVGMKYGGQPL----WHHVECFAQLRGELGWLDTGEN 180
Query: 164 LSGWGNLTVSDQGAVKALVNVPSTTKNGDVSTSRAASVASSNNLPDEHASDLESKLEAQT 223
L G+ L D+ VK + V K+ VS+++ A + + +L K++ Q+
Sbjct: 181 LPGFQTLKSDDKADVKKALPV---IKDEGVSSAKKAKIEKIDEEDAASIKELTEKIKKQS 237
Query: 224 KELWALKDDLKKHVTTAELREMLEANGQDST-GSELDLRDHCADGMMFGALGRCPICSG- 281
K L+ +D++K ++ ++ +LEAN + G L D AD + FGAL C C G
Sbjct: 238 KRLFKFRDEIKNEMSKDDMVALLEANNMEPVKGDSEKLLDQVADLLTFGALLPCTDCKGR 297
Query: 282 PLRYSGGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIR 341
L + Y C G + W+KC+ +EPER KIP ++L K + + IR
Sbjct: 298 QLLFHKSGYLCNGDLTEWTKCTKLLKEPER--KSCKIPGYLKYKFL-KDVRKNPEVRAIR 354
Query: 342 VLPPRTSNSPASSQASKS-----PCQSSKSENLGDLRVSFSRLPKESKCVSCCLINESAE 396
+PP TS + K P + L ++ ++ PKE + + I++
Sbjct: 355 YIPPSTSTILKNISLKKGDELDGPKVKRERPPLYNIEIALIA-PKEREGIVKDRISKLGG 413
Query: 397 T-------NCLVLGGVPDDPD---AEMRKARKMKVPIVREDYL----------------- 429
T V+ P++ + + M+KA+ + + ++ EDYL
Sbjct: 414 TVSTKITEKTTVVLSTPEEVERMSSRMKKAKTLGLHVIPEDYLEAVEQNGAGAINYISSM 473
Query: 430 ------VDCFKR--QKKLPFDLYKVEVVGESSSMVTIKVKGRSAVHEASGMQDTGHI-LE 480
D R Q++ K +T+K+K AV SG++D H+ +
Sbjct: 474 SLCDWGTDPATRITQEESKSSKSKSIYTKSVPKSMTLKIKDGLAVDPDSGLEDVAHVYVS 533
Query: 481 DGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLEECSK 540
K YN L ++D+ NS+Y LQ+++ D + +VFR WGR+G IGG+KL+ S
Sbjct: 534 RNKEKYNVVLGITDIQKNKNSFYKLQLLESDMKNRFWVFRSWGRIGT-TIGGNKLDNFSN 592
Query: 541 -EDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEKI 599
DA+ +FK L+LEK+GN +E ++NF K G++ P DY + ++
Sbjct: 593 LVDAIVQFKELYLEKSGN---HFENRENFVKVAGRMYPIDI-------DYAEDSKIDLSA 642
Query: 600 GTDADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQ 659
D S+L ++ +++K++F+V++ + MMEFD++M +MPLGKLS+ IQ ++ LTEI
Sbjct: 643 EHDIKSKLPLSVQDIIKLMFDVDSMKRTMMEFDLDMEKMPLGKLSQKQIQSAYKVLTEIY 702
Query: 660 NLLNNGAYDPSVKESLIIDASNRFFTVIP----SIHPHVIRDEDDFKSKVKMLEALQDIE 715
L+ G + IDA+NRF+T+IP + P ++ + + +ML++L +IE
Sbjct: 703 ELIQGGGTNAK-----FIDATNRFYTLIPHNFGTQSPPLLDTTEQVEQLRQMLDSLIEIE 757
Query: 716 IASRLVGFDVDSDD--SLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAPTHTDWSLE 773
A L+ + D +D+ Y++L + PL +SE+Y L++KY+ THA TH + LE
Sbjct: 758 CAYSLLQTEDSKADINPIDKHYEQLKTKLEPLDKNSEEYILLQKYVKNTHAETHKLYDLE 817
Query: 774 LEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMF 833
+ ++F + R+GE ++ + +KL NR LLWHGSRLTNF GILS GL+IAPPEAP TGYMF
Sbjct: 818 VVDIFKVARQGEARRYKPF-KKLHNRRLLWHGSRLTNFAGILSHGLKIAPPEAPVTGYMF 876
Query: 834 GKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGL 893
GKGIYFAD+VSKSA YC T N GLMLLSEV LG++ E AKY+ K P+ KHS G
Sbjct: 877 GKGIYFADMVSKSANYCCTSHHNSTGLMLLSEVALGDMMECTAAKYVTKLPNDKHSCFGR 936
Query: 894 GKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 953
G+T+P S+ + D V +P GKP+ ++ S L+YNE+I+Y+ AQV +Q++L++ F +K
Sbjct: 937 GRTMPNPSESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIYDIAQVNIQYMLRMNFKYK 996
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 3 NPPKPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFD---GFMPMWNHASCVLRK 59
N K + +EYAKSGR+SCR C+ I K+ +R+ K V ++ G P+W+H C +
Sbjct: 109 NAIKDFGIEYAKSGRASCRGCEQKILKDQIRIRKTVFDTEVGMKYGGQPLWHHVECFAQL 168
Query: 60 ANQIKSLD---DVEGIESLRWEDQQKIRKYV----EEGVGSGSSSKSNVTAAEYGIEVSQ 112
++ LD ++ G ++L+ +D+ ++K + +EGV S +K ++ +
Sbjct: 169 RGELGWLDTGENLPGFQTLKSDDKADVKKALPVIKDEGVSSAKKAKIE--------KIDE 220
Query: 113 TSRATCRHCSKKIMKGEVRI 132
A+ + ++KI K R+
Sbjct: 221 EDAASIKELTEKIKKQSKRL 240
>sp|P35875|PARP_DROME Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp
PE=2 SV=1
Length = 994
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/503 (40%), Positives = 309/503 (61%), Gaps = 24/503 (4%)
Query: 457 TIKVKGRSAVHEASGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDC 516
T KVK AV SG++D H+ D + Y+ L ++D+ NSYY +Q+++ DK
Sbjct: 507 TFKVKDGLAVDPDSGLEDIAHVYVDSNNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKY 566
Query: 517 YVFRKWGRVGNDKIGGSKLEEC-SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKI 575
++FR WGR+G + IG SKLEE + E A FK ++ +KTGN +EQ+ NF K+ G++
Sbjct: 567 WIFRSWGRIGTN-IGNSKLEEFDTSESAKRNFKEIYADKTGN---EYEQRDNFVKRTGRM 622
Query: 576 LPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLAPALVELMKMLFNVETYRAAMMEFDINM 635
P Y ++++ + S+L ++ L+K++F++++ +MEF I+M
Sbjct: 623 YPIEI-------QYDDDQKLVKHESHFFTSKLEISVQNLIKLIFDIDSMNKTLMEFHIDM 675
Query: 636 SEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPSIH---- 691
+MPLGKLS + IQ + + EI N+L G+ + +IDA+NRF+T+IP
Sbjct: 676 DKMPLGKLSAHQIQSAYRVVKEIYNVLECGS-----NTAKLIDATNRFYTLIPHNFGVQL 730
Query: 692 PHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDSD--DSLDEKYKKLCCDIAPLPHDS 749
P +I + +ML++L +IE+A ++ + SD + LD Y ++ + L +S
Sbjct: 731 PTLIETHQQIEDLRQMLDSLAEIEVAYSIIKSEDVSDACNPLDNHYAQIKTQLVALDKNS 790
Query: 750 EDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLT 809
E++ ++ +Y+ THA TH + L++ +VF + R+GE +F + +KL NR LLWHGSRLT
Sbjct: 791 EEFSILSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPF-KKLHNRKLLWHGSRLT 849
Query: 810 NFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLG 869
NFVGILS GLRIAPPEAP TGYMFGKGIYFAD+VSKSA YC T ++N GLMLLSEV LG
Sbjct: 850 NFVGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALG 909
Query: 870 EVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMY 929
++ E AKY++K + KHS G G+T+P + D V +P G+ + S L+Y
Sbjct: 910 DMMECTSAKYINKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETITDEHLKSSLLY 969
Query: 930 NEYIVYNTAQVKMQFLLKVRFHH 952
NEYIVY+ AQV +Q+L ++ F +
Sbjct: 970 NEYIVYDVAQVNIQYLFRMEFKY 992
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 36/365 (9%)
Query: 7 PWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKSL 66
P+ EYA++GR++C+ CKS I K+ LR+ MVQS+ D +P W H +C K + S+
Sbjct: 6 PYLAEYARTGRATCKGCKSTISKDTLRIAVMVQSAFHDAKVPNWFHKTCFF-KNQRPSSV 64
Query: 67 DDVEGIESLRWEDQQKIRKYVEE-------GVGSGSSSKSNVTAAEYGIEVSQTSRATCR 119
D++ I +LR+ DQ+++ VE +G S N+ ++GIE +++SR+TCR
Sbjct: 65 GDIQNIGNLRFADQKELTDLVENIQEVISAQLGKKRSKAFNLALKDFGIEYAKSSRSTCR 124
Query: 120 HCSKKIMKGEVR---------ISAKPDGQGTKGLAWHHANCFLDLSPS----TQVEKLSG 166
C +KI K VR + K GQ WHH CF L E + G
Sbjct: 125 GCEQKINKDLVRLRKTVYDTEVGMKYGGQP----LWHHLECFAQLRSELGWFASGEDMPG 180
Query: 167 WGNLTVSDQGAVKALVNVPSTTKNGDVSTSRAASVASSNNLPDEHASDLESKLEAQTKEL 226
+ +L DQ VK +P T RA S N E + +L+ Q
Sbjct: 181 FQSLADDDQAKVKNA--IPPIKSEELPDTKRAKMELSDTNEEGEK----KQRLKDQNDAY 234
Query: 227 WALKDDLKKHVTTAELREMLEANGQDS-TGSELDLRDHCADGMMFGALGRCPIC-SGPLR 284
+ +DD+K + ++ +L+ N Q TG L D AD + FGA+ C C S
Sbjct: 235 FRFRDDIKNKMKKKDIDILLKFNNQQPVTGDTEKLFDQTADLLTFGAIESCSECNSCQFI 294
Query: 285 YSGGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQY-LVKWFKSQRTKKPIRVL 343
+ Y C G S W+KC+ +EP R +P+E + Y + K + +
Sbjct: 295 VNKSGYICNGNHSEWTKCNKLLKEPTR--SACIVPKELKALYNFLNTVKEIPSTRIFNNF 352
Query: 344 PPRTS 348
PP S
Sbjct: 353 PPNKS 357
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 6 KPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFD---GFMPMWNHASCVLRKANQ 62
K + +EYAKS RS+CR C+ I K+ +RL K V ++ G P+W+H C + ++
Sbjct: 109 KDFGIEYAKSSRSTCRGCEQKINKDLVRLRKTVYDTEVGMKYGGQPLWHHLECFAQLRSE 168
Query: 63 I---KSLDDVEGIESLRWEDQQKIRKYV 87
+ S +D+ G +SL +DQ K++ +
Sbjct: 169 LGWFASGEDMPGFQSLADDDQAKVKNAI 196
>sp|O88554|PARP2_MOUSE Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=Parp2 PE=1 SV=3
Length = 559
Score = 362 bits (928), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 214/516 (41%), Positives = 313/516 (60%), Gaps = 41/516 (7%)
Query: 454 SMVTIKVKGRSAVH-EASGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDK 512
S+ T+ +KG++ V E + H+ +G VY+ LN ++L N YY++Q+++DD
Sbjct: 62 SVKTLLLKGKAPVDPECAAKLGKAHVYCEGDDVYDVMLNQTNLQFNNNKYYLIQLLEDDA 121
Query: 513 GSDCYVFRKWGRVGNDKIGGSKLEECSKE--DAVCEFKRLFLEKTGNPWEAWEQKQNFQK 570
+ V+ +WGRVG K G L CS + A F++ FL+KT N WE ++NF+K
Sbjct: 122 QRNFSVWMRWGRVG--KTGQHSLVTCSGDLNKAKEIFQKKFLDKTKN---NWEDRENFEK 176
Query: 571 KPGK--ILPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLAPALVELMKMLFNVETYRAAM 628
PGK +L Y S + E+ +SQL + EL+K++ NV+T M
Sbjct: 177 VPGKYDMLQMDYAASTQ-----DESKTKEEETLKPESQLDLRVQELLKLICNVQTMEEMM 231
Query: 629 MEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIP 688
+E + PLGKL+ I+ G+++L +I++ + G + + +++A N F+T IP
Sbjct: 232 IEMKYDTKRAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHGRA-----LVEACNEFYTRIP 286
Query: 689 -----SIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDS-DDSLDEKYKKLCCDI 742
SI P VIR E + KVK+LEAL DIEIA +LV + + LD+ Y+ L C +
Sbjct: 287 HDFGLSIPP-VIRTEKELSDKVKLLEALGDIEIALKLVKSERQGLEHPLDQHYRNLHCAL 345
Query: 743 APLPHDSEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLL 802
PL H+S ++++I +YL +THAPTH D+++ L +VF +E+EGE + F + L NRMLL
Sbjct: 346 RPLDHESNEFKVISQYLQSTHAPTHKDYTMTLLDVFEVEKEGEKEAF---REDLPNRMLL 402
Query: 803 WHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLML 862
WHGSRL+N+VGILS GLR+APPEAP TGYMFGKGIYFAD+ SKSA YCF + GL+L
Sbjct: 403 WHGSRLSNWVGILSHGLRVAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLL 462
Query: 863 LSEVGLGEVYEL----KKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPV 918
LSEV LG+ EL KA+ + + GKHSTKG+GK P + F+ + TVP G
Sbjct: 463 LSEVALGQCNELLEANPKAQGLLR---GKHSTKGMGKMAPSPAHFITL-NGSTVPLGPAS 518
Query: 919 PSNVRASE---LMYNEYIVYNTAQVKMQFLLKVRFH 951
+ + E L YNE+IVY+ QV+M++LLK++F+
Sbjct: 519 DTGILNPEGYTLNYNEFIVYSPNQVRMRYLLKIQFN 554
>sp|Q9UGN5|PARP2_HUMAN Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=PARP2 PE=1 SV=2
Length = 583
Score = 360 bits (923), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 315/514 (61%), Gaps = 29/514 (5%)
Query: 452 SSSMVTIKVKGRSAVH-EASGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQD 510
S S+ + +KG++ V E + H+ +G VY+ LN ++L N YY++Q+++D
Sbjct: 80 SESVKALLLKGKAPVDPECTAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNKYYLIQLLED 139
Query: 511 DKGSDCYVFRKWGRVGNDKIGGSKLEECSKE--DAVCEFKRLFLEKTGNPWEAWEQKQNF 568
D + V+ +WGRVG K+G L CS A F++ FL+KT N WE ++ F
Sbjct: 140 DAQRNFSVWMRWGRVG--KMGQHSLVACSGNLNKAKEIFQKKFLDKTKN---NWEDREKF 194
Query: 569 QKKPGK--ILPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLAPALVELMKMLFNVETYRA 626
+K PGK +L Y T+ + + K+ S K +SQL + EL+K++ NV+
Sbjct: 195 EKVPGKYDMLQMDYATN-TQDEEETKKEESLKSPLKPESQLDLRVQELIKLICNVQAMEE 253
Query: 627 AMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTV 686
MME N + PLGKL+ I+ G+++L +I++ + G + + +++A N F+T
Sbjct: 254 MMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHGRA-----LMEACNEFYTR 308
Query: 687 IPSIH----PHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDVDS-DDSLDEKYKKLCCD 741
IP P +IR + + K+++LEAL DIEIA +LV ++ S + LD+ Y+ L C
Sbjct: 309 IPHDFGLRTPPLIRTQKELSEKIQLLEALGDIEIAIKLVKTELQSPEHPLDQHYRNLHCA 368
Query: 742 IAPLPHDSEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRML 801
+ PL H+S ++++I +YL +THAPTH+D+++ L ++F +E++GE + F + L NRML
Sbjct: 369 LRPLDHESYEFKVISQYLQSTHAPTHSDYTMTLLDLFEVEKDGEKEAF---REDLHNRML 425
Query: 802 LWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLM 861
LWHGSR++N+VGILS GLRIAPPEAP TGYMFGKGIYFAD+ SKSA YCF + GL+
Sbjct: 426 LWHGSRMSNWVGILSHGLRIAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLL 485
Query: 862 LLSEVGLGEVYELKKAK-YMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPS 920
LLSEV LG+ EL +A + GKHSTKGLGK P + FV + TVP G +
Sbjct: 486 LLSEVALGQCNELLEANPKAEGLLQGKHSTKGLGKMAPSSAHFVTL-NGSTVPLGPASDT 544
Query: 921 NVRASE---LMYNEYIVYNTAQVKMQFLLKVRFH 951
+ + L YNEYIVYN QV+M++LLKV+F+
Sbjct: 545 GILNPDGYTLNYNEYIVYNPNQVRMRYLLKVQFN 578
>sp|Q5Z8Q9|PRP2A_ORYSJ Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica
GN=PARP2-A PE=3 SV=2
Length = 660
Score = 351 bits (900), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 200/518 (38%), Positives = 298/518 (57%), Gaps = 33/518 (6%)
Query: 455 MVTIKVKGRSAV--HEASGMQDTGHILE-----DGKSVYNTTLNMSDLSTGVNSYYILQI 507
+VT KG + + H ++ T H+L+ G +Y+ T+N +++ N +YI+Q
Sbjct: 157 IVTATRKGAAVLDQHIPDHIKMTYHVLQVWFLLKGDEIYDATMNQTNVGDNNNKFYIIQA 216
Query: 508 IQDDKGSDCYVFRKWGRVG---NDKIGGSKLEECSKEDAVCEFKRLFLEKTGNPWEAWEQ 564
++ D G V+ +WGRVG DK+ G S+E A+ EF+ F KT N W +
Sbjct: 217 LESDAGGSFMVYNRWGRVGARGQDKLHGPF---SSREQAIYEFEGKFHGKTNNHWSDRKS 273
Query: 565 KQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLAPALVELMKMLFNVETY 624
+ + +K T Y +D NK+VS +++L + + ++ N+
Sbjct: 274 FECYARKY-----TWLEMDYGEADRETNKKVSPSTDQIKETKLETRIASFISLICNISMM 328
Query: 625 RAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFF 684
+ M+E N ++PLGKLSK+ I KG++ L I N+++ D E L + F+
Sbjct: 329 KQQMVEIGYNSDKLPLGKLSKSTIFKGYDVLKRISNVISRA--DRRQLEQL----TGEFY 382
Query: 685 TVIP------SIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFD-VDSDDSLDEKYKK 737
TVIP + +I K+K++M+EAL +IEIA++L+ D D DD L +YK+
Sbjct: 383 TVIPHDFGFKKMREFIIDTPQKLKAKLEMVEALGEIEIATKLLEDDSTDQDDPLYARYKQ 442
Query: 738 LCCDIAPLPHDSEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLK 797
L CD PL SE+Y +I+ YL TH THT +++++ ++F + R GE ++F +
Sbjct: 443 LSCDFTPLEVGSEEYSMIKTYLANTHGKTHTSYTVDVVQIFKVSRHGEMERFQKFA-TAG 501
Query: 798 NRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNP 857
NRMLLWHGSRLTN+ GILSQGLRIAPPEAP TGYMFGKG+YFAD+ SKSA YC+ +
Sbjct: 502 NRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACR 561
Query: 858 VGLMLLSEVGLGEVYELKKAKY-MDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGK 916
G++LL EV LGE+ EL A Y + P GK STKG+G+T P ++ D V VP GK
Sbjct: 562 SGVLLLCEVALGEMNELLNADYDANNLPKGKLSTKGVGQTEPNTAESKITDDGVVVPLGK 621
Query: 917 PVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHKR 954
P + L+YNE+IVYN Q++M+++L V F+ K+
Sbjct: 622 PKAEPSKRGSLLYNEFIVYNVDQIRMRYVLHVSFNFKK 659
>sp|Q0E0Q3|PARP3_ORYSJ Poly [ADP-ribose] polymerase 3 OS=Oryza sativa subsp. japonica
GN=PARP3 PE=2 SV=1
Length = 831
Score = 348 bits (892), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 234/777 (30%), Positives = 387/777 (49%), Gaps = 56/777 (7%)
Query: 213 SDLESKLEAQTKELWALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGA 272
SDL K A KE +++H+T ++R++L+ N QD++GSE + C D M +G
Sbjct: 67 SDLNGKATA-VKEFSEFCKAIREHLTIEDMRKILQGNEQDASGSEDAVVPRCEDVMFYGP 125
Query: 273 LGRCPICSGPLRYSGGIYRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFK 332
L +CP+C G L G Y C G S W+ CS+ST P R G K+P++ + ++ KW K
Sbjct: 126 LDKCPVCGGQLECKGLKYNCTGTHSEWACCSFSTNNPSRRGGPIKVPDDVKNDFVRKWLK 185
Query: 333 SQRTKKPIRVLPPRTSNSPASSQASKSPCQSSKSENLGDLRVSFSRLP---KESKCVSCC 389
Q K P R + S + G + + S C
Sbjct: 186 QQEGNK----YPKRNLDDEGIFSGMMIALSGRMSRSHGYFKEQIMKHGGKVNNSVIGVTC 241
Query: 390 LINESAETNCLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKLPFDLYKV--E 447
++ AE + GG +A + P+V E++++D ++++K P Y + +
Sbjct: 242 VVASPAERHQGGSGG--------FAEALERGTPVVSENWIIDSVQKKEKQPLAAYDIASD 293
Query: 448 VVGESSSM----------------VTIKVKGRSAVHEASGMQ-DTGHILEDGKSVYNTTL 490
VV E + +K+ G+ AVH+ S ++ D GHI E +YN
Sbjct: 294 VVPEGRGLPLGNLDPTEEAIETLAAELKLAGKRAVHKDSKLEKDGGHIYEKDGIIYNCAF 353
Query: 491 NMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLEECSKE--DAVCEFK 548
++ DL +N I+Q+I + + +++ K G +G+D++ ++E+ DA+ EF
Sbjct: 354 SVCDLGGDINQLCIMQLIMVPE-NHLHLYYKKGPIGHDQMAEERVEDFGSRFNDAIKEFV 412
Query: 549 RLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLA 608
RLF E TGN +E WE+++ F+KK K+ P + GV + + A +L
Sbjct: 413 RLFEEVTGNEFEPWEREKKFKKKCMKMYPLDMDDGVDVRHGGV--ALRQLGAAAAHCKLD 470
Query: 609 PALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYD 668
P++ +MK L + E YR A+ E ++ ++P+G L+ ++++G E L E + + +
Sbjct: 471 PSVTFIMKQLCSQEIYRYALTEMGHDVPDLPIGMLTDLHLKRGEETLLEWKQDVESAPES 530
Query: 669 PSVKESLIIDASNRFFTVIPSIHPHVIRDEDDFKSKVKM-LEALQDIEIASRLVG--FDV 725
++ ++ SN++FT+ P+ P+ ++ + V LE ++DI +ASRL+G F
Sbjct: 531 GPAADAFWMEISNKWFTLFPTTRPYTMKGYEQIADNVASGLETVRDINVASRLIGDVFGS 590
Query: 726 DSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAPTHTD---WSLELEEVFSLER 782
DD L + YKKL C I + DSEDY++I KYL T+ P +S +E ++++E
Sbjct: 591 TLDDPLSQCYKKLGCSINRVVEDSEDYKMILKYLEKTYEPVKVGDVVYSATVERIYAVES 650
Query: 783 EGEFDKFSSYQ--RKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFA 840
SY +KL N++LLW G+R +N + L G A P GYMFGK I +
Sbjct: 651 SA----LPSYDEIKKLPNKVLLWCGTRSSNLLRHLRDGFVPAVCHIPVPGYMFGKAIVCS 706
Query: 841 DLVSKSAQYCFTDKKNPVGLMLLSEVGLG----EVYELKKAKYMDKPPDGKHSTKGLGKT 896
D +++A Y FT P G ++L+ LG E+ ++ + + + K KG+G+
Sbjct: 707 DAAAEAALYGFTAVDRPEGYLVLAVASLGKEIQEITGTPGSEDVKRMEEKKMGVKGVGRK 766
Query: 897 VPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 953
S+ WRD VTVPCGK VPS + L YNEY VY+ QV + FL+ V++ +
Sbjct: 767 TTDPSEHFTWRDGVTVPCGKLVPSTNKDGPLEYNEYAVYDPKQVSIAFLVGVKYEEQ 823
>sp|O50017|PARP2_MAIZE Poly [ADP-ribose] polymerase 2 OS=Zea mays GN=PARP2 PE=2 SV=1
Length = 653
Score = 345 bits (884), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/526 (37%), Positives = 302/526 (57%), Gaps = 40/526 (7%)
Query: 447 EVVGESSSMVTIKVKGRSAV--HEASGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSYYI 504
EV + MVT KG + + H ++ H+L+ G +Y+ TLN +++ N +YI
Sbjct: 149 EVEVKKEKMVTATKKGAAVLDQHIPDHIKVNYHVLQVGDEIYDATLNQTNVGDNNNKFYI 208
Query: 505 LQIIQDDKGSDCYVFRKWGRV---GNDKIGGSKLEECSKEDAVCEFKRLFLEKTGNPWEA 561
+Q+++ D G V+ +WGRV G DK+ G +++ A+ EF+ F KT N
Sbjct: 209 IQVLESDAGGSFMVYNRWGRVGVRGQDKLHGP---SPTRDQAIYEFEGKFHNKTNN---H 262
Query: 562 WEQKQNFQKKPGKILPTGYCTSYSL--SDYG-VNKQVSEKIGTDA--DSQLAPALVELMK 616
W ++NF+ Y Y+ DYG K++ + TD +++L + + +
Sbjct: 263 WSDRKNFK---------CYAKKYTWLEMDYGETEKEIEKGSITDQIKETKLETRIAQFIS 313
Query: 617 MLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLI 676
++ N+ + M+E N ++PLGKL K I KG+ L I ++++ D E L
Sbjct: 314 LICNISMMKQRMVEIGYNAEKLPLGKLRKATILKGYHVLKRISDVISKA--DRRHLEQL- 370
Query: 677 IDASNRFFTVIP------SIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFD-VDSDD 729
+ F+TVIP + +I K+K++M+EAL +IEIA++L+ D D DD
Sbjct: 371 ---TGEFYTVIPHDFGFRKMREFIIDTPQKLKAKLEMVEALGEIEIATKLLEDDSSDQDD 427
Query: 730 SLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKF 789
L +YK+L CD PL DS++Y +I+ YL TH TH+ +++++ ++F + R GE ++F
Sbjct: 428 PLYARYKQLHCDFTPLEADSDEYSMIKSYLRNTHGKTHSGYTVDIVQIFKVSRHGETERF 487
Query: 790 SSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQY 849
+ +NRMLLWHGSRL+N+ GILSQGLRIAPPEAP TGYMFGKG+YFAD+ SKSA Y
Sbjct: 488 QKFA-STRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANY 546
Query: 850 CFTDKKNPVGLMLLSEVGLGEVYELKKAKY-MDKPPDGKHSTKGLGKTVPQESDFVKWRD 908
C+ + G++LL EV LG++ EL A Y + P GK +KG+G+T P + D
Sbjct: 547 CYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLRSKGVGQTAPNMVESKVADD 606
Query: 909 DVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHKR 954
V VP G+P + L+YNEYIVYN Q++M+++L V F+ KR
Sbjct: 607 GVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 652
>sp|Q1SGF1|PARP3_MEDTR Putative poly [ADP-ribose] polymerase 3 OS=Medicago truncatula
GN=PARP3 PE=3 SV=1
Length = 799
Score = 338 bits (867), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 236/759 (31%), Positives = 377/759 (49%), Gaps = 79/759 (10%)
Query: 235 KHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPLRYSGGIYRCRG 294
+ ++ +++E+LEAN DS+GS+L++ C D + FGAL +C +C+G + + G Y CRG
Sbjct: 72 EQLSLEQMKEILEANDLDSSGSDLEITRRCQDLLFFGALEKCMVCNGNMEFDGRRYGCRG 131
Query: 295 YQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQR--TKKPIRVLPPRTSNSPA 352
+ S WS C++STREP R K+P+ + + K + +K+P R L
Sbjct: 132 FYSEWSSCTFSTREPPRKDEPIKLPDSVQNSPVSDLLKKYQDPSKRPQRDL--------- 182
Query: 353 SSQASKSPCQSSKSENLGDLRVSFSRLPKESKCVSCCLINESAETNCLVLGGVPDDPDAE 412
+ P +G L + S CL+ AE + GG DA
Sbjct: 183 --GLAIKPFTGMMISLMGRLNRTHLNFSGAS-----CLVASPAERD---RGGTSKLADAM 232
Query: 413 MRKARKMKVPIVREDYLVDCFKRQKKLPFDLYKV-------------------EVVGESS 453
R +P+VRE +L D ++Q+ P + Y + E ES
Sbjct: 233 ERG-----IPVVREAWLTDSIEKQEPQPLESYDLVSDLSVDGKGIPWDKQDPGEEAIESL 287
Query: 454 SMVTIKVKGRSAVHEASGMQDT-GHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDK 512
S +K+ G+ V++ + + + G I E +YN ++ D +N Y ++Q+I +
Sbjct: 288 S-AELKLYGKRGVYKDTKLHEQDGKIFEKDGILYNCAFSLCDQGRKLNDYCVMQLIVVPE 346
Query: 513 GSDCYVFRKWGRVGNDKIGGSKLEECSKED-AVCEFKRLFLEKTGNPWEAWEQKQNFQKK 571
S +++ K GRVG+D +LEEC D A+ EF RLF E TGN +E+WE+++ FQKK
Sbjct: 347 NS-LHLYFKKGRVGDDPSAEERLEECENVDNAIKEFVRLFEEITGNEFESWEREKKFQKK 405
Query: 572 PGKILPTGYCTSYSLSDYGVNKQVSEKIGTDADS-QLAPALVELMKMLFNVETYRAAMME 630
P K P + + + ++G A +L P + MK+L + E Y+ A+ME
Sbjct: 406 PLKFYPIDMDDGVEVRHGALGLR---QLGIAATHCKLEPMVANFMKVLCSQEIYKYALME 462
Query: 631 FDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPSI 690
+ ++P+G ++ ++++ E L E + +++ D S ++FT++ S
Sbjct: 463 MGYDSPDLPIGMVTNLHLKRCEEILLEFIEKVKTLKETGPKADAIWSDFSQKWFTLMHST 522
Query: 691 HPHVIRDEDDFKSKVKM-LEALQDIEIASRLVGFDVDS--DDSLDEKYKKLCCDIAPLPH 747
P + RD + LE ++DI +AS L+G S DD L + YKKL C I PL
Sbjct: 523 RPFIFRDYQEIADHAAAALEGVRDITLASHLIGDMSGSTIDDPLSDTYKKLGCSITPLEK 582
Query: 748 DSEDYQLIEKYLHATHAPTHT---DWSLELEEVFSLEREGEFDKFSSYQR--KLKNRMLL 802
+S DY++I KYL T+ P ++ + +E +F++E SY K+ N++LL
Sbjct: 583 NSNDYEMIVKYLEKTYEPVKVGDIEYGVSVENIFTVESSA----CPSYADIVKMPNKVLL 638
Query: 803 WHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLML 862
W GSR +N + L +G A P GYMFGK I +D +++A+Y FT P G ++
Sbjct: 639 WCGSRSSNLLRHLHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLV 698
Query: 863 LSEVGLG-EVYELKKAKYMDKPPDGKHS-------TKGLGKTVPQESDFVKWRDDVTVPC 914
L+ LG E+ ELK PP+ S KGLGK ES+ W+DD+ VPC
Sbjct: 699 LAIASLGNEITELKS------PPEDTTSLEEKKVGVKGLGKKKTDESEHFVWKDDIKVPC 752
Query: 915 GKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 953
G + S S L YNEY VY+ QV++ +L+ V++ K
Sbjct: 753 GSIIASEHEDSPLEYNEYAVYDPKQVRISYLVGVKYEEK 791
>sp|Q11207|PARP2_ARATH Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana GN=PARP2
PE=2 SV=1
Length = 637
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 287/496 (57%), Gaps = 38/496 (7%)
Query: 477 HILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLE 536
H+L+ G VY+ LN +++ N +++LQ+++ D V+ +WGRVG G SKL+
Sbjct: 160 HVLQRGDDVYDAILNQTNVRDNNNKFFVLQVLESDSKKTYMVYTRWGRVGVK--GQSKLD 217
Query: 537 EC--SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYG---- 590
S + A+ F F +KT N W ++ F +P ++ DYG
Sbjct: 218 GPYDSWDRAIEIFTNKFNDKTKN---YWSDRKEF-------IPHPKSYTWLEMDYGKEEN 267
Query: 591 ---VNKQV--SEKIGTDADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSK 645
VN + S S+L + + + ++ NV MME N +++PLGK+SK
Sbjct: 268 DSPVNNDIPSSSSEVKPEQSKLDTRVAKFISLICNVSMMAQHMMEIGYNANKLPLGKISK 327
Query: 646 NNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIP------SIHPHVIRDED 699
+ I KG+E L I +++ YD + E L S F+TVIP + VI
Sbjct: 328 STISKGYEVLKRISEVIDR--YDRTRLEEL----SGEFYTVIPHDFGFKKMSQFVIDTPQ 381
Query: 700 DFKSKVKMLEALQDIEIASRLVGFDVD-SDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKY 758
K K++M+EAL +IE+A++L+ D DD L Y++L C + P+ +DSE++ ++ Y
Sbjct: 382 KLKQKIEMVEALGEIELATKLLSVDPGLQDDPLYYHYQQLNCGLTPVGNDSEEFSMVANY 441
Query: 759 LHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQG 818
+ THA TH+ +++E+ ++F R E D+F + KNRMLLWHGSRLTN+ GILSQG
Sbjct: 442 MENTHAKTHSGYTVEIAQLFRASRAVEADRFQQFSSS-KNRMLLWHGSRLTNWAGILSQG 500
Query: 819 LRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAK 878
LRIAPPEAP TGYMFGKG+YFAD+ SKSA YC+ + G++LL EV LG++ EL +
Sbjct: 501 LRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYANTGANDGVLLLCEVALGDMNELLYSD 560
Query: 879 Y-MDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYNEYIVYNT 937
Y D P GK STKG+GKT P S+ D V VP GKPV + L+YNEYIVYN
Sbjct: 561 YNADNLPPGKLSTKGVGKTAPNPSEAQTLEDGVVVPLGKPVERSCSKGMLLYNEYIVYNV 620
Query: 938 AQVKMQFLLKVRFHHK 953
Q+KM+++++V+F++K
Sbjct: 621 EQIKMRYVIQVKFNYK 636
>sp|Q9SWB4|PARP3_SOYBN Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1
Length = 815
Score = 335 bits (858), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 235/760 (30%), Positives = 384/760 (50%), Gaps = 66/760 (8%)
Query: 235 KHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPLRYSGGIYRCRG 294
+H+ ++R++LEANG DS+GS+L++ C D + +GAL +C +C+G L + G Y CRG
Sbjct: 70 EHLPLEQMRDILEANGLDSSGSDLEITRRCQDLLFYGALDKCSVCNGSLEFDGRRYVCRG 129
Query: 295 YQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQR--TKKPIRVLPPRTSNSPA 352
+ S W+ C++STR P R + K+P+ + K + + +P R L + P
Sbjct: 130 FYSEWASCTFSTRNPPRKQEPIKLPDSVQNSLASDLLKKYQDPSHRPHRDL--GLAEKPF 187
Query: 353 SSQASKSPCQSSKSENLGDLRVS-FSRLPKESKCVSCCLINESAETNCLVLGGVPDDPDA 411
+ + +++ + + S S CL+ AE GG +
Sbjct: 188 TGMMISLMGRLTRTHHYWKTTIEKHGGKVANSIIGSTCLVASPAERE---RGGT-----S 239
Query: 412 EMRKARKMKVPIVREDYLVDCFKRQKKLPFDLYKV-------------------EVVGES 452
++ +A + +P+VRE +L+D ++Q+ P + Y + E ES
Sbjct: 240 KLAEAMERSIPVVREAWLIDSIEKQEPQPLEAYDLVSDLSVDGKGIPWDKQDPGEEAIES 299
Query: 453 SSMVTIKVKGRSAVHEASGMQDTG-HILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDD 511
S +K+ G+ V++ + +Q+ G I E +YN ++ D G+N Y ++Q+I
Sbjct: 300 LS-AELKLYGKRGVYKDTKLQEQGGKIFERDGILYNCAFSVCDQGRGLNDYCVMQLIVVP 358
Query: 512 KGSDCYVFRKWGRVGNDKIGGSKLEECSKED-AVCEFKRLFLEKTGNPWEAWEQKQNFQK 570
+ F+K GRVG+D +LEE D A+ EF RLF E TGN +E WE+++ FQK
Sbjct: 359 ENRLHLYFKK-GRVGDDPNAEERLEEWDNVDGALKEFVRLFEEITGNEFEPWEREKKFQK 417
Query: 571 KPGKILPTGYCTSYSLSDYGVNKQVSEKIGTDADS-QLAPALVELMKMLFNVETYRAAMM 629
KP K P + + + ++G A +L P + MK+L + E Y+ A+M
Sbjct: 418 KPLKFYPIDMDDGIEVRHGALGLR---QLGIAATHCKLEPLVANFMKVLCSQEIYKYALM 474
Query: 630 EFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPS 689
E + ++P+G ++ +++K + L E + + + E++ D S R+FT++ S
Sbjct: 475 EMGYDCPDLPIGMVTNLHLKKCEDVLLEFIDKVKSLKETGPKAEAVWTDFSQRWFTLMHS 534
Query: 690 IHPHVIRDEDDFKSKVKM-LEALQDIEIASRLVGFDVDS--DDSLDEKYKKLCCDIAPLP 746
P RD + LE ++DI AS L+G S DD L E YKKL C I+ L
Sbjct: 535 TRPFNFRDYQEIADHAAAALEGVRDITQASHLIGDMTGSTIDDPLSETYKKLGCSISALD 594
Query: 747 HDSEDYQLIEKYLHATHAPTHT---DWSLELEEVFSLEREGEFDKFSSYQR--KLKNRML 801
S+DY++I KYL T+ P ++ + +E +F+++ G SY+ KL N++L
Sbjct: 595 KSSDDYEMIVKYLEKTYEPVKVGDIEYGVSVENIFAVQTGG----CPSYEDIIKLPNKVL 650
Query: 802 LWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLM 861
LW GSR +N + L +G A P GYMFGK I +D +++A+Y FT P G +
Sbjct: 651 LWCGSRSSNLLRHLQKGFLPAICSLPIPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFL 710
Query: 862 LLSEVGLG-EVYELKKAKYMDKPPDGKHS-------TKGLGKTVPQESDFVKWRDDVTVP 913
+L+ LG E+ ELK PP+ S KG GK ES+ W+DD+ VP
Sbjct: 711 VLAIASLGNEITELKT------PPEDASSLEEKKVGVKGPGKKKTDESEHFVWKDDIKVP 764
Query: 914 CGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 953
CGK V S+ + S L YNEY VY+ + ++ +L+ V++ K
Sbjct: 765 CGKLVASDHQDSPLEYNEYAVYDKKRARISYLVGVKYEEK 804
>sp|Q0JMY1|PRP2B_ORYSJ Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica
GN=PARP2-B PE=3 SV=2
Length = 605
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/510 (36%), Positives = 279/510 (54%), Gaps = 47/510 (9%)
Query: 455 MVTIKVKGRSAVHE--ASGMQDTGHILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDK 512
+VT KG + + + ++ H+L+ G +Y+ T+N +++ N +YI+Q ++ D
Sbjct: 131 IVTATKKGAAVLDQYIPDNIKTAYHVLQVGDEIYDATMNQTNVGGNNNKFYIIQALESDA 190
Query: 513 GSDCYVFRKWGRVGNDKIGGSKLEECSKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKP 572
G + V+ +WGRVG I S K K +LE
Sbjct: 191 GGNFMVYSRWGRVGTRDIHWSY----RKGSHCYAHKYTWLE------------------- 227
Query: 573 GKILPTGYCTSYSLSDYGVNKQVSEKIGTDADSQLAPALVELMKMLFNVETYRAAMMEFD 632
Y +D NK+ S +++L + ++ ++ + M+E
Sbjct: 228 ---------MDYGEADKETNKKTSSITNQLEETKLETRTASFISLICDISMMKQQMVEIG 278
Query: 633 INMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIP---- 688
N ++PLGKLSK+ I KG++ L I N+++ D + E L + F++VIP
Sbjct: 279 YNADKLPLGKLSKSTILKGYDVLKRISNVISGADTDRTQLEQL----TGEFYSVIPHDFG 334
Query: 689 --SIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDV-DSDDSLDEKYKKLCCDIAPL 745
+ +I K+K++M+EAL +IEIA +L+ D D D L +YK+ CCD PL
Sbjct: 335 FKKMSEFIIDTPQKLKAKLEMVEALSEIEIAIKLLEDDSSDQDHPLYARYKQFCCDFTPL 394
Query: 746 PHDSEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHG 805
DSE+Y +I+ YL TH THT +++++ ++F + R GE ++F + NRMLLWHG
Sbjct: 395 EVDSEEYSMIKTYLTNTHGKTHTGYTVDIVQIFKVSRLGEMERFQKFASA-GNRMLLWHG 453
Query: 806 SRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSE 865
SRLTN+ GILSQGLRIAPPEAP +G+MFGKG+YFAD+ SKSA YC + G+MLL E
Sbjct: 454 SRLTNWAGILSQGLRIAPPEAPISGFMFGKGVYFADMFSKSANYCCASEACKSGVMLLCE 513
Query: 866 VGLGEVYELKKAKY-MDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRA 924
V LGE+ EL + D P+GK STKG+G+T P ++ D + +P GKP R
Sbjct: 514 VALGEMNELLYGDFGADNLPNGKLSTKGVGQTEPNIAESKITDDGMVIPLGKPEKVPSRR 573
Query: 925 SELMYNEYIVYNTAQVKMQFLLKVRFHHKR 954
LMYNEYIVYN Q++M+++L V F+ KR
Sbjct: 574 GSLMYNEYIVYNVDQIRMRYILNVNFNFKR 603
>sp|Q9N4H4|PME1_CAEEL Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans
GN=pme-1 PE=2 SV=1
Length = 945
Score = 323 bits (829), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 205/548 (37%), Positives = 302/548 (55%), Gaps = 48/548 (8%)
Query: 428 YLVDCFKRQKKLPFDLYKVEVVGESSSMVTIKVKGRSAVHEASGMQDTGHILE---DGKS 484
Y + F +P VG+ +S T +K + V + D H+ + DG S
Sbjct: 423 YAAEAFDSTNNVPIK------VGDLTSTNTHIIKKGTVVDAKFALADRCHVFKNEIDG-S 475
Query: 485 VYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLEECSK-EDA 543
+Y TL+ +DL+ NSYY +Q+++DD+ + YVFR WGRVG + +GG+K E S +A
Sbjct: 476 LYQATLSFTDLTQNKNSYYKIQLLKDDQRENYYVFRSWGRVGTE-VGGNKHESYSNSNEA 534
Query: 544 VCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEKIGTDA 603
+ +F+ +F EKT N W +++F+K PG SY +DY Q+++ T
Sbjct: 535 ILKFQDVFHEKTKNDWIY---RKHFRKMPGMF-------SYVETDYSEFAQITDTEITPG 584
Query: 604 DSQLAPALV-ELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLL 662
L P V E++ +F+VE ++A+ F++++++MPLG+LS N I FE L +I +LL
Sbjct: 585 SKTLLPKSVKEVVMSIFDVENMKSALKSFEMDVNKMPLGRLSHNQINLAFEVLNDISDLL 644
Query: 663 NNGAYDPSVKESLIIDASNRFFTVIPSIH----PHVIRDEDDFKSKVKMLEALQDIEIA- 717
D S I+D SN+F+T+IP P I K K ML AL DI+ A
Sbjct: 645 VKLPIDAS----RILDFSNKFYTIIPHNFGMRVPEPIDSFHKIKEKNNMLNALLDIKFAY 700
Query: 718 SRLVGFDVDSDDSL-----DEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAPTHTDWSL 772
++ G DV + SL D Y+KL C + PL +D+ +I +YL TH TH D +
Sbjct: 701 DQISGGDVPASTSLGIDPVDINYQKLKCIMEPLQQGCDDWNMIHQYLKNTHGATH-DLKV 759
Query: 773 ELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYM 832
EL ++ L R+ E KF +R + NR LLWHGS NF GIL QGLRIAPPEAP +GYM
Sbjct: 760 ELIDILKLNRDNESSKF---KRHIGNRRLLWHGSGKMNFAGILGQGLRIAPPEAPVSGYM 816
Query: 833 FGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELKKAKYMDKP--PDGKHST 890
FGKG+YFAD+ SKS YC + K +LL +V LG V +L +K + + P G S
Sbjct: 817 FGKGVYFADMFSKSFFYCRANAKEE-AYLLLCDVALGNVQQLMASKNVSRQTLPAGFQSV 875
Query: 891 KGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASE----LMYNEYIVYNTAQVKMQFLL 946
+GLG+ P+E D T+P G + L+YNE+IVY+ Q+++++L+
Sbjct: 876 QGLGRQCPREIGSYNHPDGYTIPLGLTYMQLQGKQDVDYHLLYNEFIVYDVDQIQLKYLV 935
Query: 947 KVRFHHKR 954
+V+ HH R
Sbjct: 936 RVKMHHAR 943
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 155/377 (41%), Gaps = 80/377 (21%)
Query: 2 ANPPKPWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKAN 61
+N P P+ +EYAKSGRS+C++CK NI + LR+ S+ FDG M W H +C K
Sbjct: 4 SNEPLPYAIEYAKSGRSNCKTCKKNIALDQLRMSMNRPSTFFDGNMDSWFHYNCFWIK-- 61
Query: 62 QIKSLDD-----VEGIESLRWEDQQKIRKYVEEGVGSGSS------SKSNVTAAEYGIEV 110
I+ DD + G++ LRWEDQ+K+R+ ++ + S + V + E
Sbjct: 62 MIRGRDDINISSIRGVDWLRWEDQEKLRQEIQHFKTASPPTLTPLCSTTTVILSTIKTEK 121
Query: 111 SQTSRATCRHCSKKIMKGEVRISAKPDGQGTKGLAWHHANCFLDL--SPSTQVEKLSGWG 168
S ++R C C + +GE++ KG A +H CFL S VE + GW
Sbjct: 122 SLSNRGKCGKCGQNFERGEIKAH-------NKGKA-NHFKCFLQEFDKISGTVEDIPGWA 173
Query: 169 ----NLTVSDQG------AVKALVNVPSTTKNGDVSTSRA--------ASVASSNNLP-- 208
N + G A K P+T + + A S SSN P
Sbjct: 174 DYEENFKIKAVGEYVEALAAKRRSTEPATPASASPTPPEAETPVLSAEGSPESSNKRPAS 233
Query: 209 --------------DEHASDLESKLEAQTKE------------LWALKDDLKKHVTTAEL 242
++ A K EA+ E LW + ++ T ++
Sbjct: 234 SEIIEIDGEGNPDENDFAKKRRMKKEARLMEVQKKRMKKQSDLLWEYRQIFERMPYTDKI 293
Query: 243 REMLE-----ANGQDSTGSELDLRDHCADGMMFGALGRCPICS-GPLRYSGG--IYRCRG 294
+ E G D T + + D +FG C CS G + Y+ Y C G
Sbjct: 294 SILRENEQDIPEGHDPTAQVI---ERLVDNALFGCPIICQTCSNGKIVYNSSCRTYVCTG 350
Query: 295 YQSAWSKCSYSTREPER 311
Y + +SKC+Y ++ P R
Sbjct: 351 YATEYSKCTYESKNPIR 367
>sp|Q9FK91|PARP3_ARATH Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3
PE=2 SV=2
Length = 814
Score = 301 bits (770), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 221/765 (28%), Positives = 371/765 (48%), Gaps = 71/765 (9%)
Query: 233 LKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGALGRCPICSGPLRYSG-GIYR 291
++++++ +++E+LE NGQD + E L C D + +GAL +CP+C G L +
Sbjct: 67 VEENLSIDQIKEVLEINGQDCSAPEETLLAQCQDLLFYGALAKCPLCGGTLICDNEKRFV 126
Query: 292 CRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVKWFKSQRTKKPIRVLPPRTSNSP 351
C G S W C +ST++P R + KIP+ + + K + K P R S
Sbjct: 127 CGGEISEWCSCVFSTKDPPRKEEPVKIPDSVMNSAISDLIKKHQDPKS---RPKRELGS- 182
Query: 352 ASSQASKSPCQSSKSENLGDLRVSFSRLPKESKCVSCCLINESAETNCLVL-------GG 404
+ P +G L + K+ + + N CLV+ GG
Sbjct: 183 -----ADKPFVGMMISLMGRLTRTHQYWKKKIERNGGKVSNTVQGVTCLVVSPAERERGG 237
Query: 405 VPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKLPFDLYKV----EVVGES-------- 452
++M +A + +P+V E +L+D ++ + P + Y V V G+
Sbjct: 238 T-----SKMVEAMEQGLPVVSEAWLIDSVEKHEAQPLEAYDVVSDLSVEGKGIPWDKQDP 292
Query: 453 ------SSMVTIKVKGRSAVHEASGMQDTG-HILEDGKSVYNTTLNMSDLSTGVNSYYIL 505
S +K+ G+ V+ + +Q+ G I E +YN ++ DL G N Y I+
Sbjct: 293 SEEAIESFSAELKMYGKRGVYMDTKLQERGGKIFEKDGLLYNCAFSICDLGKGRNEYCIM 352
Query: 506 QIIQDDKGSDCYVFRKWGRVGND-KIGGSKLEECSKEDAVCEFKRLFLEKTGNPWEAWEQ 564
Q++ S+ ++ K G+VG+D E +E A+ EF RLF E GN +E WE+
Sbjct: 353 QLVTV-PDSNLNMYFKRGKVGDDPNAEERLEEWEDEEAAIKEFARLFEEIAGNEFEPWER 411
Query: 565 KQNFQKKPGKILPTGYCTSYSLSDYGVNKQVSEKIG-TDADSQLAPALVELMKMLFNVET 623
++ QKKP K P + + + ++G A +L + +K+L E
Sbjct: 412 EKKIQKKPHKFFPIDMDDGIEVRSGALGLR---QLGIASAHCKLDSFVANFIKVLCGQEI 468
Query: 624 YRAAMMEFDINMSEMPLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRF 683
Y A+ME ++ ++P+G L+ ++++ E L E + E++ D S+R+
Sbjct: 469 YNYALMELGLDPPDLPMGMLTDIHLKRCEEVLLEFVEKVKTTKETGQKAEAMWADFSSRW 528
Query: 684 FTVIPSIHPHVIRDEDDFKSKV-KMLEALQDIEIASRLVG-FDVDS-DDSLDEKYKKLCC 740
F+++ S P + D ++ E ++DI ASRL+G D+ DD L ++YKKL C
Sbjct: 529 FSLMHSTRPMRLHDVNELADHAASAFETVRDINTASRLIGDMRGDTLDDPLSDRYKKLGC 588
Query: 741 DIAPLPHDSEDYQLIEKYLHATHAP---THTDWSLELEEVFSLEREGEFDKFSSYQ--RK 795
I+ + +SEDY+++ KYL T+ P + ++ + ++ VF++E D S +K
Sbjct: 589 KISVVDKESEDYKMVVKYLETTYEPVKVSDVEYGVSVQNVFAVES----DAIPSLDDIKK 644
Query: 796 LKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKK 855
L N++LLW GSR +N + + +G A P GYMFG+ I +D +++A+Y FT
Sbjct: 645 LPNKVLLWCGSRSSNLLRHIYKGFLPAVCSLPVPGYMFGRAIVCSDAAAEAARYGFTAVD 704
Query: 856 NPVGLMLLSEVGLGEVYELKKAKYMDKPP-------DGKHSTKGLGKTVPQESDFVKWRD 908
P G ++L+ LGE + PP D K KGLG+ +ES+ WRD
Sbjct: 705 RPEGFLVLAVASLGE-----EVTEFTSPPEDTKTLEDKKIGVKGLGRKKTEESEHFMWRD 759
Query: 909 DVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRFHHK 953
D+ VPCG+ VPS + S L YNEY VY+ Q ++FL++V++ K
Sbjct: 760 DIKVPCGRLVPSEHKDSPLEYNEYAVYDPKQTSIRFLVEVKYEEK 804
>sp|Q9Y6F1|PARP3_HUMAN Poly [ADP-ribose] polymerase 3 OS=Homo sapiens GN=PARP3 PE=1 SV=3
Length = 533
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 160/503 (31%), Positives = 247/503 (49%), Gaps = 73/503 (14%)
Query: 486 YNTTLNMSDLSTGVNSYYILQIIQD-DKGSDCYVFRKWGRVGNDKIGGSKLEECSK-EDA 543
YN TLN +++ N +YI+Q++QD ++ C+ WGRVG ++G SK+ ++ EDA
Sbjct: 66 YNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCW--NHWGRVG--EVGQSKINHFTRLEDA 121
Query: 544 VCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKILPTGYCTSYSL---------------SD 588
+F++ F EKT N W ++ +F PGK Y+L D
Sbjct: 122 KKDFEKKFREKTKN---NWAERDHFVSHPGK---------YTLIEVQAEDEAQEAVVKVD 169
Query: 589 YGVNKQVSEKIGTDADSQLAPALVELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKNNI 648
G + V++++ L PA +L+ +F+ E ++ M D+++ +MPLGKLSK I
Sbjct: 170 RGPVRTVTKRV---QPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQI 226
Query: 649 QKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIP----SIHPHVIRDEDDFKSK 704
+GFEAL ++ L P+ + + S+ F+TVIP P I + ++K
Sbjct: 227 ARGFEALEALEEALKG----PTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAK 282
Query: 705 VKMLEALQDIEIASRLVGFD------VDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKY 758
ML L DIE+A L + LD Y+ L C + L + +Y++I+ Y
Sbjct: 283 KDMLLVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTY 342
Query: 759 LHAT----HAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGI 814
L T PT L+ ++ + +EGE D+F ++ KL NR LLWHG+ + I
Sbjct: 343 LEQTGSNHRCPT-------LQHIWKVNQEGEEDRFQAHS-KLGNRKLLWHGTNMAVVAAI 394
Query: 815 LSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDK--KNPVGLMLLSEVGLGEVY 872
L+ GLRI P +G GKGIYFA SKSA Y K + VG M L EV LG +
Sbjct: 395 LTSGLRI----MPHSGGRVGKGIYFASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREH 450
Query: 873 ELKKAK-YMDKPPDGKHSTKGLGKTVP---QESDFVKWRDDVTVPCGKPVP-SNVRASEL 927
+ + PP G S G T P Q+++ V VP G+PVP +S
Sbjct: 451 HINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTF 510
Query: 928 MYNEYIVYNTAQVKMQFLLKVRF 950
+EY++Y +Q ++++LL+V
Sbjct: 511 SQSEYLIYQESQCRLRYLLEVHL 533
>sp|Q08824|PARP1_ONCMA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou
GN=parp1 PE=2 SV=2
Length = 135
Score = 136 bits (342), Expect = 8e-31, Method: Composition-based stats.
Identities = 68/136 (50%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
Query: 702 KSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYL 759
++KV+ML+ L DIE+A L+ G + + D +D Y+KL I + +++ ++I +Y+
Sbjct: 1 QAKVEMLDNLLDIEVAYSLLKGGAEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYV 60
Query: 760 HATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQGL 819
THA TH ++L +EE+F + REGE+ K+ +Q L NR LLWHGSR TN+ GILSQGL
Sbjct: 61 KNTHAATHNTYTLVVEEIFKIVREGEYQKYRPFQ-DLPNRQLLWHGSRATNYAGILSQGL 119
Query: 820 RIAPPEAPATGYMFGK 835
RIAPPEAP TGYMFGK
Sbjct: 120 RIAPPEAPVTGYMFGK 135
>sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenorhabditis elegans GN=pme-5
PE=2 SV=1
Length = 2276
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 132/541 (24%), Positives = 223/541 (41%), Gaps = 107/541 (19%)
Query: 467 HEASGMQDTGHI--LEDGKSVYNTTLNMSDL---STGVNSYYILQIIQDDKGSDCYVFRK 521
H++S G + ++ + ++ +N +DL G +++Y +QII+ +F
Sbjct: 1779 HKSSTYSTNGLVSFCDETQQYFDVLMNKTDLMYGRCGFHNFYRMQIIKRRDAELFILFTN 1838
Query: 522 WGRVGNDKIGGSKLEECSKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKI-LPTGY 580
WGR+G+ S E A EFK +F K+GN W NF+ P K L
Sbjct: 1839 WGRIGSGMGEFQTTPFNSLELAAKEFKSIFKSKSGNEWAPL---ANFRDMPKKYRLVETD 1895
Query: 581 CTSYSLSDYGVNKQVSEKIGTDADSQLAPALVELMKMLFNV------ETYRAAMMEFDIN 634
T SL++ +++ K T+ D + +M+ ++ +TY + + +
Sbjct: 1896 STPTSLAEI----ELTWKKNTEKDP--------IRRMIADISDAKTLKTYASQVQMY--G 1941
Query: 635 MSEMPLGKLSKNNIQKGFEALTEIQNLLNN----GAYDPSVKESLIIDA-------SNRF 683
S P G+ +K NI+K L +++ N V ES ++DA S +
Sbjct: 1942 GSSQPFGRFTKENIEKAKLVLDKLEKNANRIKQMVEAQTGVVESNLLDAYITTSELSGDY 2001
Query: 684 FTVIPSIHPHVIRDEDDFKSKVKM------------LEALQDIEIASRLV-GFDVDSD-D 729
+++IPS E +F + ++ L Q+IE A+RL+ + D D
Sbjct: 2002 YSLIPS-------GEYEFSNLTRLDNVEEIARHRARLNRCQEIETATRLLCAAEFRQDLD 2054
Query: 730 SLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAP-THTDWSLELEEVFSLEREGEFDK 788
+D + C+ DS+ Q + +++H + LE+ + S E+ F+
Sbjct: 2055 RVDYIRSAIQCEYRLETPDSDISQRLLQWIHNSGGKQAKVKMILEISPMLSTEK---FEP 2111
Query: 789 FSSYQRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQ 848
F + N+ LWHG++ TN + IL G I PP A G +FG GIY AD KS
Sbjct: 2112 FVNDD----NQKFLWHGTKATNLMSILKNGFLIDPPSACKNGNLFGSGIYLADSFEKSTH 2167
Query: 849 YCFTDKKNPVGLMLLSEVGLGEVYELKKAKYM--------------------DKPPDGKH 888
YC + ML+ + LG+V L Y D+ P G
Sbjct: 2168 YC-QPSAGGINYMLVCQTALGKVRTLDTIPYHYMNQSSSSAEKYEDTLHYIGDRFPAGSL 2226
Query: 889 STKGLGKTVPQESDFVKWRDDVTVPCGKPVP---SNVRASELMYNEYIVYNTAQVKMQFL 945
+ G+G + +P K P SN L ++EYIV N +V +++
Sbjct: 2227 TNDGVGMPL--------------LPLRKRDPIQGSNYGFGTLDFSEYIVRNPNRVLPKYI 2272
Query: 946 L 946
+
Sbjct: 2273 V 2273
>sp|Q09525|PME2_CAEEL Poly(ADP-ribose) polymerase pme-2 OS=Caenorhabditis elegans
GN=pme-2 PE=2 SV=1
Length = 538
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 170/390 (43%), Gaps = 68/390 (17%)
Query: 611 LVELMKMLFNVETYRAAMMEFDINMS-EMPLGKLSKNNIQKGFEALTEIQNLLNNGAYD- 668
L ELMK + + + + + + N + P+ LS + G+E L++I+ + +
Sbjct: 155 LKELMKCICDEDVHLGLLKQLKFNEAFGRPIDCLSLAQLTTGYEILSKIEESIGGKSARR 214
Query: 669 -----PSVKESLIIDAS--------NRFFTVIPSIHPHVIRDEDDFKSKVK----MLEAL 711
P V + ++ S N+++++IP + + D +K++ +L+AL
Sbjct: 215 STRGRPRVADRVLAVKSDGPSLHDINKYYSLIPHSFGFCVPPKIDSHAKIQAERELLDAL 274
Query: 712 Q-DIEIASRLVGFD--VDSDDSLDEKYKKLCCDIAPLPHDSEDYQLIEKYLHATHAPTHT 768
+ IE + L S D Y++L C + P+ SE+ A PTH
Sbjct: 275 KGSIEASLELKDLKKTASSKDIYQRLYERLPCHLEPV---SEEIAGKIGDCLAMRGPTHC 331
Query: 769 DWSLELEEVFSLEREGEFDKFSSYQ-------RKLKN-------------RMLLWHGSRL 808
+ L L + F L+ E + + R K+ + LLWHG+R+
Sbjct: 332 -YKLSLIDAFELKDPNEIPTEAPVEVQEVPKKRGRKSTKTAAPTVPPPTTKRLLWHGTRV 390
Query: 809 TNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGL 868
TN IL GL+ P G MFG G+YFA++ +KSA YC + V MLL EV
Sbjct: 391 TNVFSILMNGLQF--PVGDRCGLMFGNGVYFANVPTKSANYCCPEASKRV-FMLLCEVET 447
Query: 869 GE---VY--ELKKAKYMDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVR 923
+Y E+ + M+K K S GK P RD V + SN+
Sbjct: 448 ANPLVLYESEIDADEKMEKA--KKTSVYAAGKHTP--------RDTVEINGIPAFKSNLE 497
Query: 924 ASE----LMYNEYIVYNTAQVKMQFLLKVR 949
E L+Y+EY+++N K++++++V+
Sbjct: 498 TIEEETRLLYDEYVMFNKEHFKIKYVVEVK 527
>sp|Q9UKK3|PARP4_HUMAN Poly [ADP-ribose] polymerase 4 OS=Homo sapiens GN=PARP4 PE=1 SV=3
Length = 1724
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 46/317 (14%)
Query: 639 PLGKLSKNNIQKGFEALTEIQNLLNNGAYDPSVKESLIIDASNRFFTVIPSIHPHVIRDE 698
P+ ++S N++ K L ++ L NG +++ + F+ +IP H + E
Sbjct: 285 PVNRISLNDVSKAEGILLLVKAALKNGETAEQLQKMM-----TEFYRLIP--HKGTMPKE 337
Query: 699 DDFKSKVKMLEALQDIEIASRLVGFDVDSDDSLD-EKYKKLCCDIAPLPHDSEDYQLIEK 757
+ K + Q I + ++ + KY+ L C I + ++E++ + K
Sbjct: 338 VNLGLLAKKADLCQLIRDMVNVCETNLSKPNPPSLAKYRALRCKIEHVEQNTEEFLRVRK 397
Query: 758 YLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRLTNFVGILSQ 817
+ H H+ +++ ++F + R E +F S KL N L HGS + N VGIL +
Sbjct: 398 EVLQNH---HSKSPVDVLQIFRVGRVNETTEFLS---KLGNVRPLLHGSPVQNIVGILCR 451
Query: 818 GLRIAPPEAPATGYM------FGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEV 871
GL + P G G GIYF+D +S S +Y + + L+L+ +V LG+
Sbjct: 452 GL-LLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSIKYSHPGETDGTRLLLICDVALGKC 510
Query: 872 YELKKAKY-MDKPPDGKHSTKGLGKTVPQESDFVKWRDDVTVPCGKPVPSNVRASELMYN 930
+L + + + + P G S G+ +T +DF DD
Sbjct: 511 MDLHEKDFSLTEAPPGYDSVHGVSQTASVTTDF---EDD--------------------- 546
Query: 931 EYIVYNTAQVKMQFLLK 947
E++VY T QVKM++++K
Sbjct: 547 EFVVYKTNQVKMKYIIK 563
>sp|Q84JE8|ZDP_ARATH Polynucleotide 3'-phosphatase ZDP OS=Arabidopsis thaliana GN=ZDP
PE=1 SV=1
Length = 694
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 7 PWKVEYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGFMPMWNHASCVLRKANQIKSL 66
P EYAKS RSSCRSC + I ++LRLG ++ + M W+H C + I S+
Sbjct: 49 PVVAEYAKSNRSSCRSCSNKIAVKSLRLG-LISKGRGGVDMTRWHHFDCFPTDSESIASV 107
Query: 67 DDVEGIESLRWEDQQKIRKYVEE--GVGSGSSSKSNVTAAEY-----GIEVSQTSRATCR 119
DD++G+ +L EDQ + K VE+ V + + A ++ G+ + TS
Sbjct: 108 DDIQGLSALEKEDQDALTKLVEQCGKVPAKKPDEKKGKAKKHIMGPKGLTKAATSSKVIA 167
Query: 120 HCSKK-----------IMKGEVRIS-AKPDGQGTKGLAWHHANCF-LDLSPSTQVEKLSG 166
+K I+ ++R+ D +G WHH CF +D P VE + G
Sbjct: 168 DNAKSSRSSCNRCSQTIVSKDLRVGLVTEDSRGFDITRWHHLGCFPIDFHPIDSVEDIGG 227
Query: 167 WGNLTVSDQGAVKALVNV 184
+ +L DQ +K L V
Sbjct: 228 YSSLEKGDQMELKYLAEV 245
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 1 MANPPKPWKV--EYAKSGRSSCRSCKSNIEKEALRLGKMVQSSQFDGF-MPMWNHASCVL 57
+ N P KV EYAKS RS+C+ C I + LRLG + ++ F GF M W+H C
Sbjct: 319 VKNSPDSSKVISEYAKSSRSTCKKCSQTIAAKELRLGLVTRN--FRGFDMKQWHHLGCFP 376
Query: 58 RKANQIKSLDDVEGIESLRWEDQQKIRKYVEE 89
++ I S++D+ G L+ DQ +++ V++
Sbjct: 377 VDSDPIVSVEDIGGFSELQSGDQDALKELVQQ 408
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 109 EVSQTSRATCRHCSKKIMKGEVRIS-AKPDGQGTKGLAWHHANCF-LDLSPSTQVEKLSG 166
E +++SR+TC+ CS+ I E+R+ + +G WHH CF +D P VE + G
Sbjct: 331 EYAKSSRSTCKKCSQTIAAKELRLGLVTRNFRGFDMKQWHHLGCFPVDSDPIVSVEDIGG 390
Query: 167 WGNLTVSDQGAVKALVN 183
+ L DQ A+K LV
Sbjct: 391 FSELQSGDQDALKELVQ 407
>sp|P49916|DNLI3_HUMAN DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1 SV=2
Length = 1009
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 10 VEYAKSGRSSCRSCKSNIEKEALRLGKMVQS--SQFDGFMPMWNHASCVLRK-------A 60
V+YAK G + C+ CK I K R+GK+V + S+ G M W H C+ K
Sbjct: 95 VDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARATT 154
Query: 61 NQIKSLDDVEGIESLRWEDQQKIRKYVEE--GVGSGSSSKSNVTAAE 105
+I+ L ++EG E L ++++I +++ + +G+ K V A+
Sbjct: 155 KKIEDLTELEGWEELEDNEKEQITQHIADLSSKAAGTPKKKAVVQAK 201
>sp|P97386|DNLI3_MOUSE DNA ligase 3 OS=Mus musculus GN=Lig3 PE=1 SV=2
Length = 1015
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 10 VEYAKSGRSSCRSCKSNIEKEALRLGKMVQS--SQFDGFMPMWNHASCVLRK-------A 60
V+YAK G + C+ CK I K R+GK+V + S+ G M W H C+ K
Sbjct: 96 VDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARATT 155
Query: 61 NQIKSLDDVEGIESLRWEDQQKIRKYVEE 89
+I+ L ++EG E L ++++I +++ +
Sbjct: 156 KKIEDLTELEGWEELEDNEKEQISQHIAD 184
>sp|O55721|PARP_IIV6 Putative poly [ADP-ribose] polymerase-like 100L OS=Invertebrate
iridescent virus 6 GN=IIV6-100L PE=4 SV=1
Length = 181
Score = 48.5 bits (114), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 776 EVFSLEREGEFDKFSSY--QRKLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPA-TGYM 832
++++++R E + F+ Y + K LL HG+R ++ + IL GL+I P + +G +
Sbjct: 27 KIYTVQRFKEEEPFNKYISESVSKKTRLLIHGTRCSSVIPILQTGLKIRPSTSVHFSGKV 86
Query: 833 FGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVGLGEVYELK---------KAKYMDKP 883
+G+G YF++ V KS Y D ++L+ EV +G Y + K Y +
Sbjct: 87 YGEGNYFSEHVQKSLNYTGWDNDQ---ILLIYEVHVGNEYIYEGWYNGDRGIKLNYNELL 143
Query: 884 PDGKHSTKGLGKTVPQESDFVKWRDD 909
+G +ST Q S+ + + +D
Sbjct: 144 QNGYNSTYVKAGNGLQNSEIISYNED 169
>sp|O95271|TNKS1_HUMAN Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2
Length = 1327
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 60/166 (36%), Gaps = 46/166 (27%)
Query: 798 NRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQY-------- 849
N +L+HGS N I+ +G G MFG GIYFA+ SKS QY
Sbjct: 1178 NERMLFHGSPFIN--AIIHKGFD---ERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGT 1232
Query: 850 -CFTDKKNPVGL----MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFV 904
C T K + ML V LG+ + M P G HS
Sbjct: 1233 GCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTMKMAHAPPGHHSV-------------- 1278
Query: 905 KWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRF 950
G+P + L Y EY++Y Q ++L+ +
Sbjct: 1279 ---------IGRP-----SVNGLAYAEYVIYRGEQAYPEYLITYQI 1310
>sp|Q6PFX9|TNKS1_MOUSE Tankyrase-1 OS=Mus musculus GN=Tnks PE=1 SV=1
Length = 1320
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 60/166 (36%), Gaps = 46/166 (27%)
Query: 798 NRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQY-------- 849
N +L+HGS N I+ +G G MFG GIYFA+ SKS QY
Sbjct: 1171 NERMLFHGSPFIN--AIIHKGFD---ERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGT 1225
Query: 850 -CFTDKKNPVGL----MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKGLGKTVPQESDFV 904
C T K + ML V LG+ + M P G HS
Sbjct: 1226 GCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTMKMAHAPPGHHSV-------------- 1271
Query: 905 KWRDDVTVPCGKPVPSNVRASELMYNEYIVYNTAQVKMQFLLKVRF 950
G+P + L Y EY++Y Q ++L+ +
Sbjct: 1272 ---------IGRP-----SVNGLAYAEYVIYRGEQAYPEYLITYQI 1303
>sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1 SV=1
Length = 1166
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 18/108 (16%)
Query: 798 NRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQY-------- 849
N +L+HGS N I+ +G G MFG GIYFA+ SKS QY
Sbjct: 1025 NERMLFHGSPFVN--AIIHKGF---DERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGT 1079
Query: 850 -CFTDKKNPVGL----MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKG 892
C K + +L V LG+ + A M P G HS G
Sbjct: 1080 GCPVHKDRSCYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTG 1127
>sp|Q3UES3|TNKS2_MOUSE Tankyrase-2 OS=Mus musculus GN=Tnks2 PE=2 SV=2
Length = 1166
Score = 41.6 bits (96), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 18/108 (16%)
Query: 798 NRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQY-------- 849
N +L+HGS N I+ +G G MFG GIYFA+ SKS QY
Sbjct: 1025 NERMLFHGSPFVN--AIIHKGF---DERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGT 1079
Query: 850 -CFTDKKNPVGL----MLLSEVGLGEVYELKKAKYMDKPPDGKHSTKG 892
C K + +L V LG+ + A M P G HS G
Sbjct: 1080 GCPIHKDRSCYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTG 1127
>sp|Q8N3A8|PARP8_HUMAN Poly [ADP-ribose] polymerase 8 OS=Homo sapiens GN=PARP8 PE=2 SV=1
Length = 854
Score = 37.7 bits (86), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 794 RKLKNRMLLWHGSRLTNFVGILSQGLRIAP-PEAPATGYMFGKGIYFADLVSKSAQYCFT 852
+KL +HGS + N+ IL GL +A G M+G GIY + + S S Y
Sbjct: 687 KKLFGSTFAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYSGM 746
Query: 853 DKKNPV 858
+KK V
Sbjct: 747 NKKQKV 752
>sp|Q3UD82|PARP8_MOUSE Poly [ADP-ribose] polymerase 8 OS=Mus musculus GN=Parp8 PE=2 SV=1
Length = 852
Score = 37.7 bits (86), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 794 RKLKNRMLLWHGSRLTNFVGILSQGLRIAP-PEAPATGYMFGKGIYFADLVSKSAQYCFT 852
+KL +HGS + N+ IL GL +A G M+G GIY + + S S Y
Sbjct: 685 KKLFGSTFAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYSGM 744
Query: 853 DKKNPV 858
+KK V
Sbjct: 745 NKKQKV 750
>sp|P07207|NOTCH_DROME Neurogenic locus Notch protein OS=Drosophila melanogaster GN=N PE=1
SV=3
Length = 2703
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 40/169 (23%)
Query: 478 ILEDGKSVYNTTLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSKLEE 537
I + + Y + +D S G+N + ++C W + N K EE
Sbjct: 1495 ICDSDCNTYACNFDGNDCSLGINPW-----------ANCTANECWNKFKNGKCN----EE 1539
Query: 538 CSKEDAVCEFKRLFLEK----TGNPWEAWEQKQNFQKKPGKILPTGYCTSYSLSDYGVNK 593
C+ +A C + E+ + ++A+ QK G+C DYG N
Sbjct: 1540 CN--NAACHYDGHDCERKLKSCDSLFDAYCQKH---------YGDGFC------DYGCNN 1582
Query: 594 QVSEKIGTDADSQL-APALVE---LMKMLFNVETYRAAMMEFDINMSEM 638
G D +++ +P L E + ML NVE +R +F NMS M
Sbjct: 1583 AECSWDGLDCENKTQSPVLAEGAMSVVMLMNVEAFREIQAQFLRNMSHM 1631
>sp|B1XI04|ATPE_SYNP2 ATP synthase epsilon chain OS=Synechococcus sp. (strain ATCC 27264
/ PCC 7002 / PR-6) GN=atpC PE=3 SV=1
Length = 134
Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 136 PDGQGTKGLAWHHANCFLDLSPSTQVEKLSGWGNLTVSDQGA------VKALVNVPSTTK 189
P G G+ HA L + SGW N+ ++D A VK LVN + +
Sbjct: 25 PSSSGQIGILSGHAPLLTALESGVIRVRTSGWENIAITDGFAEVEANEVKVLVNTAAKGQ 84
Query: 190 NGDVSTSRAASVASSNNLPDEHASDLESKLEAQTKEL 226
+ D+ +R A ++ L +A+D ++ L+A+ KEL
Sbjct: 85 DIDLEEARKAFESAKAQLDQVNAADRKAILDAR-KEL 120
>sp|Q9Y7K9|YGI7_SCHPO PARP-type zinc finger-containing protein C2A9.07c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC2A9.07c PE=1 SV=3
Length = 246
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 1 MANPPKPWKVEYAKSGRSSCRSC---KSNIEKEALRLGKMVQSSQFDGFMPMWNHASC-- 55
MA ++VE AK+GR+ C+ +S I K LR G V +F + W H C
Sbjct: 1 MAESGAGYRVELAKTGRAECKGTVCGRSKIGKGDLRFGTFVDVGKFQSW--KWRHWGCVT 58
Query: 56 --VLRKANQ 62
VLR N+
Sbjct: 59 ERVLRNVNK 67
>sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens
GN=ZC3HAV1 PE=1 SV=3
Length = 902
Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 749 SEDYQLIEKYLHATHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNR-MLLWHGSR 807
SE + L +Y+ + + + ++E++ +E DKF+ + ++K LL++ +
Sbjct: 731 SEIHHLHPEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKEEGKLLFYATS 790
Query: 808 LTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVG 867
I S E Y GKGIYFA S + C D KN V M +++V
Sbjct: 791 RAYVESICSNNFDSFLHETHENKY--GKGIYFAKDAIYSHKNCPYDAKNVV--MFVAQVL 846
Query: 868 LGEVYELKKAKYMDKPP 884
+G+ E Y PP
Sbjct: 847 VGKFTE-GNITYTSPPP 862
>sp|Q92547|TOPB1_HUMAN DNA topoisomerase 2-binding protein 1 OS=Homo sapiens GN=TOPBP1
PE=1 SV=3
Length = 1522
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 400 LVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKLPFDLY 444
+ G P+D + E + ++ V IV E +L+DC + K LP LY
Sbjct: 945 FIYQGRPNDTNREYKSVKERGVHIVSEHWLLDCAQECKHLPESLY 989
>sp|O14079|MDB1_SCHPO Uncharacterized protein mdb1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mdb1 PE=1 SV=2
Length = 624
Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 396 ETNCLVLGGVPDDPDAEMRKARKMKVPIVREDYLVDCFKRQKKLPFDLYK 445
ET+ ++LG P + A + +P+V YL DC K K L F YK
Sbjct: 418 ETDFVILGSPPLRRTHKFLLATSLGIPLVSSQYLTDCIKSGKVLDFRSYK 467
>sp|Q12BR3|SYT_POLSJ Threonine--tRNA ligase OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=thrS PE=3 SV=1
Length = 635
Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 169 NLTVSDQGAVKALVNVPSTTKNGDVSTSRAASVASSNNLPDEHASDLESKLEAQTKELWA 228
++++ +G + L P G + + VA + D H +++ ++ WA
Sbjct: 168 DVSLYREGTFEDLCRGPHVPSTGKLKFFKLMKVAGAYWRGD-HRNEMLQRVYGTA---WA 223
Query: 229 LKDDLKKHVTTAELREMLEANGQDSTGSELDLR--DHCADGMMFGALGRCPICSGPLRYS 286
KD+L++++T + E E G ELDL D A G++F I G +Y
Sbjct: 224 TKDELQQYLT---MLEEAEKRDHRKLGKELDLFHIDDHAPGLVFWHPKGWTIWQGVEQYM 280
Query: 287 GGIYRCRGYQ 296
+Y+ GYQ
Sbjct: 281 RKVYQDNGYQ 290
>sp|A1VR77|SYT_POLNA Threonine--tRNA ligase OS=Polaromonas naphthalenivorans (strain
CJ2) GN=thrS PE=3 SV=1
Length = 635
Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 169 NLTVSDQGAVKALVNVPSTTKNGDVSTSRAASVASSNNLPDEHASDLESKLEAQTKELWA 228
++++ +G + L P G + + VA + D H L+ WA
Sbjct: 168 DVSLYREGKFEDLCRGPHVPSTGKLKFFKLMKVAGAYWRGDHH----NEMLQRIYGTAWA 223
Query: 229 LKDDLKKHVTTAELREMLEANGQD--STGSELDLR--DHCADGMMFGALGRCPICSGPLR 284
KD+L++++T E EA+ +D G ELDL D + G++F + G +
Sbjct: 224 TKDELQQYLTMLE-----EADKRDHRKLGKELDLFHIDDHSPGLVFWHPKGWTVWQGVEQ 278
Query: 285 YSGGIYRCRGYQ 296
Y +Y+ GYQ
Sbjct: 279 YMRKVYQNNGYQ 290
>sp|Q67NI4|AMPA_SYMTH Probable cytosol aminopeptidase OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=pepA PE=3 SV=1
Length = 491
Score = 33.5 bits (75), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 25/160 (15%)
Query: 174 DQGAVKALVNVPSTTKNGDVSTSRAASVASSNNLPDEHA---SDLESKLEAQTKELWALK 230
D G A++ V A + S++N+PD + D+ S L +T E+
Sbjct: 278 DMGGAAAVIGAMQAIARLKVKADVMAVIPSTDNMPDGGSYKPGDVVSGLSGKTVEI---- 333
Query: 231 DDLKKHVTTAELREMLEANGQDSTGSELDLRDHCADGMMFGAL-GRCPICSGPLRYSGGI 289
T AE R +L + G + C + L G C I GP+RY+
Sbjct: 334 -----RSTDAEGRLIL------ADGLAYAAKQGCRKIITASTLTGACNIALGPIRYA--- 379
Query: 290 YRCRGYQSAWSKCSYSTREPERLKGKWKIPEETNSQYLVK 329
AW + Y E +G WK+P + L+K
Sbjct: 380 --LVANDDAWEEEVYRAGEAAGERG-WKLPHDEEYYDLIK 416
>sp|Q7SXF2|UBL5_DANRE Ubiquitin-like protein 5 OS=Danio rerio GN=ubl5 PE=3 SV=1
Length = 73
Score = 33.5 bits (75), Expect = 8.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 525 VGNDKIGGSKLEECSKEDAVCEFKRLFLEKTGNPWE 560
V ND++G +C++ED + + K+L +TG WE
Sbjct: 5 VCNDRLGKKVRVKCNQEDTIGDLKKLIAAQTGTRWE 40
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 361,212,583
Number of Sequences: 539616
Number of extensions: 15735158
Number of successful extensions: 34406
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 34094
Number of HSP's gapped (non-prelim): 98
length of query: 954
length of database: 191,569,459
effective HSP length: 127
effective length of query: 827
effective length of database: 123,038,227
effective search space: 101752613729
effective search space used: 101752613729
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)