BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035627
(434 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3UHR0|BAHC1_MOUSE BAH and coiled-coil domain-containing protein 1 OS=Mus musculus
GN=Bahcc1 PE=2 SV=2
Length = 2643
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 15 PYAASIKDITQSRDGSMMVTGRWFYHPEEADRKGGGNWLSGDTRELFYSFHRDEIPVESV 74
PY I+ + +S +M+V +WFYHPEE G S L+ S H DE V+++
Sbjct: 2536 PYIGRIESLWESWGSNMVVKVKWFYHPEETKL---GKRQSDGKNALYQSCHEDENDVQTI 2592
Query: 75 MHKCVV 80
HKC V
Sbjct: 2593 SHKCQV 2598
>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4
Length = 1634
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 8 PEDTNQKPYAASIKDITQSRDGSMMVTGRWFYHPEEADRKGGGNWLSGDTRELFYSFHRD 67
P + N +P+ I+ + + G + G WFY P E +L +E+F S + +
Sbjct: 968 PAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLE---KEVFKSDYYN 1024
Query: 68 EIPVESVMHKCVVHFV 83
++PV ++ KCVV FV
Sbjct: 1025 KVPVSKILGKCVVMFV 1040
>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1
Length = 1633
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 8 PEDTNQKPYAASIKDITQSRDGSMMVTGRWFYHPEEADRKGGGNWLSGDTRELFYSFHRD 67
P + N +P+ I+ + + G + G WFY P E +L +E+F S + +
Sbjct: 966 PAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLE---KEVFKSDYYN 1022
Query: 68 EIPVESVMHKCVVHFV 83
++PV ++ KCVV FV
Sbjct: 1023 KVPVSKILGKCVVMFV 1038
>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1
Length = 1689
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 8 PEDTNQKPYAASIKDITQSRDGSMMVTGRWFYHPEEADRKGGGNWLSGDTRELFYSFHRD 67
P + N +P+ I+ + + G + G WFY P E +L +E+F S + +
Sbjct: 968 PAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLE---KEVFKSDYYN 1024
Query: 68 EIPVESVMHKCVVHFV 83
++PV ++ KCVV FV
Sbjct: 1025 KVPVSKILGKCVVMFV 1040
>sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens
GN=BAHCC1 PE=1 SV=3
Length = 2608
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 15 PYAASIKDITQSRDGSMMVTGRWFYHPEEADRKGGGNWLSGDTRELFYSFHRDEIPVESV 74
PY I+ + +S +M+V +WFYHPEE K G G L+ S H DE V+++
Sbjct: 2501 PYIGRIESMWESWGSNMVVKVKWFYHPEET--KLGKRQCDGKN-ALYQSCHEDENDVQTI 2557
Query: 75 MHKCVV 80
HKC V
Sbjct: 2558 SHKCQV 2563
>sp|Q80WC3|TNC18_MOUSE Trinucleotide repeat-containing gene 18 protein OS=Mus musculus
GN=Tnrc18 PE=1 SV=2
Length = 2878
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 15 PYAASIKDITQSRDGSMMVTGRWFYHPEEA------------DRKGGGNWLSG------- 55
PY I+ + +S +M+V +WFYHPEE D+K G + +
Sbjct: 2746 PYIGRIQSMWESWGNNMVVRVKWFYHPEETSPGKQFHEGQHWDQKSGHSLPAALRASSQR 2805
Query: 56 ---DTRELFYSFHRDEIPVESVMHKCVV 80
R L+ S H DE V++V HKC+V
Sbjct: 2806 KDFMERALYQSSHVDENDVQTVSHKCLV 2833
>sp|Q3LHL9|WGE_DROME Protein winged eye OS=Drosophila melanogaster GN=wge PE=1 SV=1
Length = 1658
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 14 KPYAASIKDITQSRDGSMMVTGRWFYHPEEADRKGGGNWLSGDTRELFYSFHRDEIPVES 73
+PY I+ + ++ G+ +V WFYHPEE + LF S H DE V++
Sbjct: 1528 RPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKLKFPGA----LFESPHEDENDVQT 1583
Query: 74 VMHKCVV 80
+ H+C V
Sbjct: 1584 ISHRCEV 1590
>sp|O15417|TNC18_HUMAN Trinucleotide repeat-containing gene 18 protein OS=Homo sapiens
GN=TNRC18 PE=1 SV=3
Length = 2968
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 22/88 (25%)
Query: 15 PYAASIKDITQSRDGSMMVTGRWFYHPEEADRKG----GGNWLSGDTRE----------- 59
PY I+ + +S +M+V +WFYHPEE G +W +R
Sbjct: 2836 PYIGRIQSMWESWGNNMVVRVKWFYHPEETSPGKQFHQGQHWDQKSSRSLPAALRVSSQR 2895
Query: 60 -------LFYSFHRDEIPVESVMHKCVV 80
L+ S H DE V++V HKC+V
Sbjct: 2896 KDFMERALYQSSHVDENDVQTVSHKCLV 2923
>sp|Q92576|PHF3_HUMAN PHD finger protein 3 OS=Homo sapiens GN=PHF3 PE=1 SV=3
Length = 2039
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 183 RFKALTRETYRDKWLERLLQGLQHNGNSFLWPDTAIAAVTALEKASHDALSSDFQKRNQK 242
+ + R + +D ++RL + N + + A T +EK K K
Sbjct: 926 QIRQSVRHSLKDILMKRLT-----DSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNK 980
Query: 243 LRQLLFNLKS--TALLALRFLKGKLEPSKILDMSPNEL 278
R L+FNLK +L + LKG++ P ++ MSP EL
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEEL 1018
>sp|Q874L8|LCL3_KLUDE Probable endonuclease LCL3 OS=Kluyveromyces delphensis GN=LCL3 PE=3
SV=1
Length = 258
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 124 SMRLISLDQKTRVRFGDLPDIEPQETAAQEQEDQLKAKRMLWKKNISPLDVSREEGCMTR 183
S+R+ +D R FG+ +E Q + L K LW I PL++ + C+
Sbjct: 134 SVRICGVDAPERSHFGNPAQPYSEEALIWLQHEILGKK--LW---IKPLNIDQYGRCVAS 188
Query: 184 FKALTRETYRDKWLERLLQGL 204
+ TR Y+D L+ L +GL
Sbjct: 189 IRYWTRFGYKDLSLQMLKEGL 209
>sp|Q497V6|BAHD1_MOUSE Bromo adjacent homology domain-containing 1 protein OS=Mus musculus
GN=Bahd1 PE=2 SV=1
Length = 772
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 2 ILFSFTPEDTNQKPYAASIKDITQSRD-GSMMVTGRWFYHPEEADRKGGGNWLSGDTREL 60
+L P T+ PY A I + ++ + G +M++ W+Y PE + E+
Sbjct: 624 VLLKSGPRKTS-TPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEPLQNEV 682
Query: 61 FYSFHRDEIPVESVMHKCVV 80
F S H+D+ V + KC V
Sbjct: 683 FASRHQDQNSVACIEEKCYV 702
>sp|Q8TBE0|BAHD1_HUMAN Bromo adjacent homology domain-containing 1 protein OS=Homo sapiens
GN=BAHD1 PE=1 SV=2
Length = 780
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 2 ILFSFTPEDTNQKPYAASIKDITQSRD-GSMMVTGRWFYHPEEADRKGGGNWLSGDTREL 60
+L P T+ PY A I + ++ + G +M++ W+Y PE + E+
Sbjct: 632 VLLKSGPRKTS-TPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEPLQNEV 690
Query: 61 FYSFHRDEIPVESVMHKCVV 80
F S H+D+ V + KC V
Sbjct: 691 FASRHQDQNSVACIEEKCYV 710
>sp|Q8SR40|GPDH_ENCCU Probable glycerol-3-phosphate dehydrogenase OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU10_0870 PE=3 SV=1
Length = 614
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 308 CNECKVGLRDIIQAGLGDRYQQLSKALGVYCHGHSWYASR 347
CN +GL D+ +A YQ + K LGV+ H W A R
Sbjct: 529 CNRLMIGLMDVKEA-----YQCIDKVLGVFKKKHGWDADR 563
>sp|Q4X0M4|SEC31_ASPFU Protein transport protein sec31 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=sec31 PE=3 SV=1
Length = 1263
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 164 LWKKNISPLDVSRE------EGCMTRFKALTRETYRDKWLERLLQGLQHNGNSFLWPDTA 217
LW +S D S+E G + F L Y D ++ G NG+ LW
Sbjct: 45 LWDLGLSSQDASQELQPIAKIGTDSGFNDLAWTDYEDN-SRGVIAGALENGSLDLW---- 99
Query: 218 IAAVTALEKASHDALSSDFQKRNQKLRQLLFNLKSTALLALRFLKGKL 265
L S DA+ S K + ++ L FN K + LLA KG+L
Sbjct: 100 --DADKLINGSSDAVISRMTKHSGAIKALQFNPKHSNLLATGGAKGEL 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,400,370
Number of Sequences: 539616
Number of extensions: 6166931
Number of successful extensions: 18900
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 18865
Number of HSP's gapped (non-prelim): 62
length of query: 434
length of database: 191,569,459
effective HSP length: 120
effective length of query: 314
effective length of database: 126,815,539
effective search space: 39820079246
effective search space used: 39820079246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)