Your job contains 1 sequence.
>035631
MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR
ASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVL
LEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYH
RSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA
FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD
QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTDSCGNDDAFFL
HNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRP
THVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDS
MHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAY
ENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGA
WNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTKLKKEFPE
VLSIKDSIIKYVLEPNKKKNNDMY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035631
(684 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 1497 8.3e-279 3
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 2614 7.4e-272 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 2579 3.8e-268 1
TAIR|locus:2015489 - symbol:NRS/ER "nucleotide-rhamnose s... 607 7.6e-118 2
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 868 7.7e-87 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 701 5.7e-86 2
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 858 8.9e-86 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 846 1.7e-84 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 842 4.4e-84 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 839 9.1e-84 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 839 9.1e-84 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 832 5.0e-83 1
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 568 2.0e-77 2
UNIPROTKB|G4MPV2 - symbol:MGG_09238 "Uncharacterized prot... 375 4.3e-70 2
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 685 1.9e-67 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 685 1.9e-67 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 646 2.6e-63 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 642 6.9e-63 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 639 1.4e-62 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 636 3.0e-62 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 631 1.0e-61 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 631 1.0e-61 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 631 1.0e-61 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 629 1.6e-61 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 627 2.7e-61 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 615 5.0e-60 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 613 8.1e-60 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 388 5.1e-59 2
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 581 2.0e-56 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 574 1.1e-55 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 571 2.3e-55 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 565 9.9e-55 1
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 564 1.3e-54 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 564 1.3e-54 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 563 1.6e-54 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 560 3.4e-54 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 549 4.9e-53 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 545 1.3e-52 1
POMBASE|SPBPB2B2.11 - symbol:SPBPB2B2.11 "nucleotide-suga... 417 2.8e-51 2
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 522 3.6e-50 1
DICTYBASE|DDB_G0274991 - symbol:DDB_G0274991 "NAD-depende... 407 9.1e-43 2
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 368 4.1e-33 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 342 2.8e-30 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 286 7.4e-29 2
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 286 7.4e-29 2
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 270 1.7e-26 2
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 307 1.7e-26 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 267 2.8e-26 2
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 267 2.8e-26 2
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 305 2.9e-26 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 305 2.9e-26 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 304 3.7e-26 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 303 4.7e-26 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 303 4.7e-26 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 307 5.2e-26 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 307 5.2e-26 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 307 5.2e-26 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 307 5.2e-26 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 305 1.7e-25 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 296 2.7e-25 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 301 3.9e-25 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 291 9.3e-25 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 298 2.3e-24 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 297 3.8e-24 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 281 1.1e-23 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 272 1.0e-22 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 269 2.2e-22 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 269 2.2e-22 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 263 9.8e-22 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 262 1.3e-21 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 278 1.6e-21 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 259 2.6e-21 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 259 2.6e-21 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 249 3.1e-20 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 248 4.0e-20 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 191 5.5e-20 2
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 249 1.9e-19 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 239 3.8e-19 1
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 206 1.3e-18 2
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 252 1.9e-18 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 248 3.7e-18 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 248 4.2e-18 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 241 2.4e-17 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 241 2.5e-17 1
TIGR_CMR|CJE_1611 - symbol:CJE_1611 "GDP-mannose 4,6-dehy... 234 3.2e-17 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 183 7.5e-17 2
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 233 1.9e-16 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 225 2.8e-16 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 176 3.7e-16 2
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 222 6.6e-16 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 223 6.9e-16 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 227 9.4e-16 1
TIGR_CMR|BA_3248 - symbol:BA_3248 "3-beta hydroxysteroid ... 210 1.4e-15 2
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 219 2.2e-15 1
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 218 2.8e-15 1
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 217 7.1e-15 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 208 4.5e-14 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 207 4.7e-14 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 194 8.3e-14 2
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 204 1.3e-13 1
WARNING: Descriptions of 195 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 1497 (532.0 bits), Expect = 8.3e-279, Sum P(3) = 8.3e-279
Identities = 269/341 (78%), Positives = 307/341 (90%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
ASY PK ILITGAAGFI SHV NRLI++YPDY+IV LDKLDYCS+LKNL+PS+ SPNFKF
Sbjct: 2 ASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+N+LL++EGIDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM+GQ LPIHG+GSNVRSYLYC DVAEAF+V+LH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G +GHVYN+GTKKER V DVA DIC LF ++PE I +V +RPFND RYFLDDQKLK+LG
Sbjct: 242 GEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILL 348
W E+T WEEGLK T++WY +NP WWGDV+GAL PHP ++++
Sbjct: 302 WSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMM 342
Score = 629 (226.5 bits), Expect = 8.3e-279, Sum P(3) = 8.3e-279
Identities = 113/146 (77%), Positives = 135/146 (92%)
Query: 533 VEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEM 592
VE LLK Y+NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMTVLDE+LPI+IEM
Sbjct: 523 VEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEM 582
Query: 593 ARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVT 652
A+RN +G WNFTNPGV+SHNEILE+Y++YI+P+ KW+NF LEEQAKV+VAPRSNN MD +
Sbjct: 583 AKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDAS 642
Query: 653 KLKKEFPEVLSIKDSIIKYVLEPNKK 678
KLKKEFPE+LSIK+S+IKY PNKK
Sbjct: 643 KLKKEFPELLSIKESLIKYAYGPNKK 668
Score = 595 (214.5 bits), Expect = 8.3e-279, Sum P(3) = 8.3e-279
Identities = 105/139 (75%), Positives = 122/139 (87%)
Query: 372 LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITG 431
LKFLIYGKTGWIGGLLGK C +GIA+E+G GRLED++SLL D++ V+PTHV N+AG+TG
Sbjct: 385 LKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTG 444
Query: 432 RPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFK 491
RPNVDWCESH+ ETIR NV GTLTLADVC+E +L+MNFATGCI+EYD HP+GS IGFK
Sbjct: 445 RPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFK 504
Query: 492 EDDEPNFTRSFYSKTKAMV 510
E+D PNFT SFYSKTKAMV
Sbjct: 505 EEDTPNFTGSFYSKTKAMV 523
Score = 43 (20.2 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 434 NVDWCESHRVETIRTNVMGTLTLADVCKEKNVL--LMNFATGCIY-EYDSMHPQGSSIGF 490
+VD + E + N+ GT L + CK + ++ +T +Y E D + + +G
Sbjct: 92 HVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD----EDALVGN 147
Query: 491 KEDDEPNFTRSFYSKTKA 508
E + T YS TKA
Sbjct: 148 HEASQLLPTNP-YSATKA 164
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 2614 (925.2 bits), Expect = 7.4e-272, P = 7.4e-272
Identities = 486/685 (70%), Positives = 575/685 (83%)
Query: 8 ASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
A+YKPK ILITGAAGFI SHV NRL+++YPDY+IV LDKLDYCS+LKNL+PS++SPNFKF
Sbjct: 2 ATYKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKF 61
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+KGDI ADL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK+T
Sbjct: 62 VKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
GQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
ITTRGNNVYGPNQFPEKLIPKFILLAM G+ LPIHG+GSNVRSYLYC DVAEAF+V+LH+
Sbjct: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLG 307
G + HVYN+GT +ER V+DVA DI LF ++P+ TI YV++RPFND RYFLDDQKLK+LG
Sbjct: 242 GEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKLG 301
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVILLTD---SCGNDD-------- 356
W E+T WEEGL+ T+EWY +NP WWGDV+GAL PHP ++++ S G+D+
Sbjct: 302 WCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGNQ 361
Query: 357 AFFLHNGYEI-C-GRSR-LKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLD 413
F + + C G R LKFLIYGKTGW+GGLLGK C+ +GI +E+G GRLED+ SL+
Sbjct: 362 TFTVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIA 421
Query: 414 DMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATG 473
D++ ++P+HV NAAG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E ++L+MNFATG
Sbjct: 422 DIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATG 481
Query: 474 CIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQV 533
CI+EYD+ HP+GS IGFKE+D+PNFT SFYSKTKAMV
Sbjct: 482 CIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMV----------------------- 518
Query: 534 EGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMA 593
E LL+ ++NVCTLR+RMPISSDL+NPRNF+TK++RYNKVVNIPNSMT+LDE+LPI+IEMA
Sbjct: 519 EELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMA 578
Query: 594 RRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVTK 653
+RN RG WNFTNPGV+SHNEILE+YK YI+P KWSNFNLEEQAKV+VAPRSNN MD K
Sbjct: 579 KRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAK 638
Query: 654 LKKEFPEVLSIKDSIIKYVLEPNKK 678
L KEFPE+LSIKDS+IKYV EPNK+
Sbjct: 639 LSKEFPEMLSIKDSLIKYVFEPNKR 663
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 2579 (912.9 bits), Expect = 3.8e-268, P = 3.8e-268
Identities = 482/689 (69%), Positives = 571/689 (82%)
Query: 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF 65
+ +YKPK ILITGAAGFI SHV NRLI+NYPDY+IV LDKLDYCS LKNL PS +SPNF
Sbjct: 2 DDTTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNF 61
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
KF+KGDI DL+NYLL++E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACK
Sbjct: 62 KFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 121
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+TGQ++RFIHVSTDEVYGETD ++ +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGL
Sbjct: 122 VTGQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 181
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P ITTRGNNVYGPNQFPEK+IPKFILLAM G+ LPIHG+GSNVRSYLYC DVAEAF+V+L
Sbjct: 182 PVITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 241
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR 305
H+G IGHVYNVGTK+ER V+DVA DIC LF +PE +I +V++RPFND RYFLDDQKLK+
Sbjct: 242 HKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKK 301
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHPSVIL-----LTD--------SC 352
LGW+E+T WE+GLK T++WY +NP WWGDV+GAL PHP +++ L+D S
Sbjct: 302 LGWQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSS 361
Query: 353 GNDDAFFL---HNGYEICGRSRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKN 409
F + NG + ++ LKFLIYGKTGW+GGLLGK C+ +GI +E+G GRLED+
Sbjct: 362 NTVQTFTVVTPKNG-DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRA 420
Query: 410 SLLDDMKRVRPTHVLNAAGITGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMN 469
SL+ D++ ++PTHV NAAG+TGRPNVDWCESH+ ETIR NV GTLTLADVC+E ++L+MN
Sbjct: 421 SLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMN 480
Query: 470 FATGCIYEYDSMHPQGSSIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLI 529
FATGCI+EYD+ HP+GS IGFKE+D+PNF SFYSKTKAMV
Sbjct: 481 FATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMV------------------- 521
Query: 530 NFQVEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIA 589
E LL+ ++NVCTLR+RMPISSDL+NPRNF+TK++RYNKVV+IPNSMTVLDE+LPI+
Sbjct: 522 ----EELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPIS 577
Query: 590 IEMARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHM 649
IEMA+RN RG WNFTNPGV+SHNEILE+YK YI+P KWSNF +EEQAKV+VA RSNN M
Sbjct: 578 IEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEM 637
Query: 650 DVTKLKKEFPEVLSIKDSIIKYVLEPNKK 678
D +KL KEFPE+LSIK+S++KYV EPNK+
Sbjct: 638 DGSKLSKEFPEMLSIKESLLKYVFEPNKR 666
>TAIR|locus:2015489 [details] [associations]
symbol:NRS/ER "nucleotide-rhamnose
synthase/epimerase-reductase" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA;IDA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0008830 "dTDP-4-dehydrorhamnose 3,5-epimerase
activity" evidence=IDA] [GO:0019305 "dTDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 EMBL:AC011000
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0008831
GO:GO:0045226 GO:GO:0010253 GO:GO:0010489 GO:GO:0010490
GO:GO:0019305 GO:GO:0008830 EMBL:AF332445 EMBL:AY513232
IPI:IPI00546034 PIR:B96655 RefSeq:NP_564806.1 UniGene:At.70069
UniGene:At.71603 ProteinModelPortal:Q9LQ04 SMR:Q9LQ04 IntAct:Q9LQ04
STRING:Q9LQ04 PRIDE:Q9LQ04 DNASU:842603 EnsemblPlants:AT1G63000.1
GeneID:842603 KEGG:ath:AT1G63000 TAIR:At1g63000 InParanoid:Q9LQ04
KO:K12451 OMA:GAISHNE PhylomeDB:Q9LQ04 ProtClustDB:PLN02778
BioCyc:ARA:AT1G63000-MONOMER BioCyc:MetaCyc:AT1G63000-MONOMER
BRENDA:1.1.1.133 ArrayExpress:Q9LQ04 Genevestigator:Q9LQ04
Uniprot:Q9LQ04
Length = 301
Score = 607 (218.7 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 110/146 (75%), Positives = 131/146 (89%)
Query: 533 VEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEM 592
VE LLK YENVCTLR+RMPISSDL+NPRNF+TK+ARY KVV+IPNSMT+LDE+LPI+IEM
Sbjct: 151 VEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYEKVVDIPNSMTILDELLPISIEM 210
Query: 593 ARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVT 652
A+RN G +NFTNPGV+SHNEILE+Y++YIDP W NF LEEQAKV+VAPRSNN +D T
Sbjct: 211 AKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDAT 270
Query: 653 KLKKEFPEVLSIKDSIIKYVLEPNKK 678
KLK EFPE++SIK+S+IK+V EPNKK
Sbjct: 271 KLKTEFPELMSIKESLIKFVFEPNKK 296
Score = 574 (207.1 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 100/141 (70%), Positives = 123/141 (87%)
Query: 370 SRLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGI 429
S FLIYGKTGWIGGLLGK C+ +GI + +G+GRL+D+ S++ D++ V+P+HV NAAG+
Sbjct: 11 SSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNAAGV 70
Query: 430 TGRPNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIG 489
TGRPNVDWCESH+VETIRTNV GTLTLAD+C+EK ++L+N+ATGCI+EYDS HP GS IG
Sbjct: 71 TGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSGIG 130
Query: 490 FKEDDEPNFTRSFYSKTKAMV 510
FKE+D PNFT SFYSKTKAMV
Sbjct: 131 FKEEDTPNFTGSFYSKTKAMV 151
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 173/343 (50%), Positives = 227/343 (66%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SHV L+++YPDY IV LDKLDYC+SLKNL P N+K
Sbjct: 13 PGSFA-KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 72 FIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYE 131
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 132 AG-VEKFIYVSTDEVYGGSLDQEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY ADV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SV+ +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 TKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGWK K PWEEG+K T+EWY+KN H W + AL P P
Sbjct: 307 EKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 701 (251.8 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 143/270 (52%), Positives = 183/270 (67%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KILITG AGFIGSH+ L K + + +I+ LDKLDYCS++ NL NFKF KG+I
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNI 69
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
++L+ + E ID ++H AA THVDNSF S +FT NNI GTH LLE CK ++K+
Sbjct: 70 LDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKK 128
Query: 133 FIHVSTDEVYGETDMESDIGNP--------EASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
FI+VSTDEVYG +E + N E S L PTNPYSA+KAGAE LV +Y++S+
Sbjct: 129 FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LP I TR NN+YGP Q+PEK+IPKFI L + ++ IHG G N R+YLY D+ AFD+I
Sbjct: 189 LPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDII 248
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTL 274
L +G IG+VYN+GT E S LDVA I +
Sbjct: 249 LRKGEIGNVYNIGTDFEISNLDVAKKIINI 278
Score = 178 (67.7 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 277 LEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWW 332
++ +K I+Y+ DRPFNDHRY ++ KL LGWK+ WEEG++ T WYK N ++W
Sbjct: 314 MDYKKFINYIDDRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRNYW 369
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 169/343 (49%), Positives = 228/343 (66%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SHV L+++YP+Y I+ LDKLDYC+SLKNL P N+K
Sbjct: 13 PGSFA-KRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L SE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+
Sbjct: 72 FIQGDICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTA-Y 130
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 131 EARVEKFIYVSTDEVYGGSLDQEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY ADV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SV+ +A ++ L K E E+ + YV DRP ND RY +
Sbjct: 247 TKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGWK K PWEEG+K T+EWY++N H W + AL P P
Sbjct: 307 EKIHSLGWKPKVPWEEGIKKTVEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 168/343 (48%), Positives = 226/343 (65%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SHV L+++YP+Y IV LDKLDYC+SLKNL N+K
Sbjct: 13 PNSFA-KRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVLL A
Sbjct: 72 FIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAH- 130
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 131 EARVEKFIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY DV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SVL +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 KKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGW+ K PW+EG+K T+EWY++N H W + AL P P
Sbjct: 307 EKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 165/343 (48%), Positives = 228/343 (66%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P+S+ K++L+TG AGFI SHV L+++YP+Y I+ LDKLDYC+SLKNL N+K
Sbjct: 13 PSSFA-KRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 72 FIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH- 130
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 131 EARVEKFIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWERYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY DV EAF +L
Sbjct: 187 PAVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SVL +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 KKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K++ LGW+ K PW+EG+K T++WY++N H W + AL P P
Sbjct: 307 EKIQGLGWRPKVPWKEGIKKTIDWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 165/343 (48%), Positives = 225/343 (65%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P S+ K++L+TG AGFI SH+ L+++YP+Y I+ LDKLDYC+SLKNL N+K
Sbjct: 13 PDSFA-KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYK 71
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F++GDI + + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 72 FIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH- 130
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+V++FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y
Sbjct: 131 EARVEKFIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWEQYKF 186
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + TR +NVYGP+Q+PEK+IPKFI L ++ IHG G R++LY DV EAF +L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVL 246
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDD 300
+G G +YN+GT E SVL +A ++ L K E E + YV DRP ND RY +
Sbjct: 247 KKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKS 306
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
+K+ LGW+ K PW+EG+K T+EWY++N H W + AL P P
Sbjct: 307 EKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 163/337 (48%), Positives = 224/337 (66%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K++L+TG AGFI SH+ L+++YP+Y I+ LDKLDYC+SLKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A +V++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 133 FIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
FI+VSTDEVYG + D E D +P+ PTNPY+++KA AE V +Y Y P + TR
Sbjct: 137 FIYVSTDEVYGGSLDKEFDESSPKQ----PTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251
+NVYGP+Q+PEK+IPKFI L ++ IHG+G R++LY DV EAF +L +G G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 252 HVYNVGTKKERSVLDVAADICTLFK-----LEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
+YN+GT E SV+ +A ++ L K E E + YV DRP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 307 GWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
GW+ K PW+EG+K T+EWY++N H W +V AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 162/337 (48%), Positives = 222/337 (65%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K++L+TG AGFI SHV L++NYP+Y I+ LDKLDYC+SLKNL N+KF++GDI
Sbjct: 23 KRLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDI 82
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L +E ID ++HFAAQTHVD SF ++ EFT N+YGT+VL+ A V++
Sbjct: 83 CEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAH-EANVEK 141
Query: 133 FIHVSTDEVYG-ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
F++VSTDEVYG TD E D +P+ PTNPY+++KA AE V +Y Y P + TR
Sbjct: 142 FVYVSTDEVYGGSTDQEFDESSPKC----PTNPYASSKAAAECFVQSYWERYQFPVVITR 197
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIG 251
+NVYGP+Q+PEK+IPKFI L + ++ IHG+G R++LY DV EAF +L G G
Sbjct: 198 SSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKPG 257
Query: 252 HVYNVGTKKERSVLDVAADICTLFKL-----EPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
+YN+GT E S++ +A ++ L K E E + YV+DRP ND RY + +K+ L
Sbjct: 258 EIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTNDLRYPMSSEKMHNL 317
Query: 307 GWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGALCPHP 343
GW+ K PW+EG+K T+EWYK+N H W + AL P P
Sbjct: 318 GWRPKVPWKEGIKKTIEWYKENFHNWKNAEKALEPFP 354
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 568 (205.0 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 125/332 (37%), Positives = 190/332 (57%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-RASPNFKFL 68
Y PK ++ITG GFIGS+ N + +P V +DKL S +N+ S R SP +K +
Sbjct: 3 YTPKNVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLV 62
Query: 69 KGDITC-ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
DI A ++N +E IDT++HFAA + + E NN+ LE +
Sbjct: 63 LTDIKNEAAILNVFEQNE-IDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTY 121
Query: 128 GQVKRFIHVSTDEVYGETDM-ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
G++KRF+H+STDEVYG++D+ E++ G E S+L+P NPY+ATK E V AY Y LP
Sbjct: 122 GKIKRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLP 181
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
+T R NN+YGPNQ+ K++P+FI +A + I G+G +RS+L+ D + +
Sbjct: 182 IVTARMNNIYGPNQWDVKVVPRFIEIAKVRGEYTIQGSGKQLRSWLFVDDASAGLKAVCE 241
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKL------EPEKTIHYVQDRPFNDHRYFLDD 300
+G + +YN+GT E++V D+A I L EP K + DRP+ND RY +
Sbjct: 242 KGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPK-YKSIPDRPYNDLRYLISI 300
Query: 301 QKLKR-LGWKEKTPWEEGLKLTL-EWYKKNPH 330
+K K LGW+ T +++G++ T+ K++ H
Sbjct: 301 EKAKNDLGWEPTTSFDDGMRHTVASALKEHKH 332
Score = 230 (86.0 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 81/309 (26%), Positives = 142/309 (45%)
Query: 371 RLKFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLE-DKNSLLD-DMKRVRPTHVLNAAG 428
++ IYG G++G L D+ I + T ++ D + ++ ++ + THV+ G
Sbjct: 334 KMHVAIYGGKGYVGQELQHVLNDRHIPYVLATKKVGFDSDEEVERELALLGVTHVICVTG 393
Query: 429 ITGRPNVDWCE--SHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGS 486
T P + E R + + NV + A + M G Y Y G+
Sbjct: 394 RTHGPGCNTIEYLEGRADKVFINVRDNMYSATILAH-----MCRKLGLHYTYI-----GT 443
Query: 487 SIGFKEDDEPNFTRSFYSKTKAMVTFLSYLEIFVLVICIECLINFQVEGLLKAYENVCTL 546
F D E + + K + TF V + F G +EN+ +
Sbjct: 444 GYMFAYDKEHPIGGAEF-KEEDEPTFFGSAYSVVKGFTDRQMNYFNQNG----WENL-NV 497
Query: 547 RLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEMARRNCRGAWNFTNP 606
R+ +P+S DL PRN ++K+ +Y ++ +IP S+T+L + + + + G N NP
Sbjct: 498 RITLPLSLDLEQPRNLLSKIIKYKELFDIPVSLTILPDCMNAMCNLMEQRSGGTLNLVNP 557
Query: 607 GVISHNEILELYKEYIDPQLKWSNFNLE-EQAKVLVAPRSNNHMDVTKLKKEFPEVLSIK 665
IS E++++YKE +D + ++ +E E+A+ L+A + N +D KL+ P VLS K
Sbjct: 558 EPISLYEVVKIYKEIVDETVNPTSIGVETERAQHLLATKGNCALDTEKLQSLAP-VLSAK 616
Query: 666 DSIIKYVLE 674
S+IK+ E
Sbjct: 617 QSLIKHFSE 625
>UNIPROTKB|G4MPV2 [details] [associations]
symbol:MGG_09238 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CM001231 GO:GO:0008831
GO:GO:0045226 RefSeq:XP_003709861.1 ProteinModelPortal:G4MPV2
EnsemblFungi:MGG_09238T0 GeneID:2680178 KEGG:mgr:MGG_09238
Uniprot:G4MPV2
Length = 292
Score = 375 (137.1 bits), Expect = 4.3e-70, Sum P(2) = 4.3e-70
Identities = 70/128 (54%), Positives = 96/128 (75%)
Query: 533 VEGLLKAYENVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIEM 592
VE ++K Y N LRLRMP+S DL +PRNFVTK+A+Y++VV+IPNS T+L ++LP+++ M
Sbjct: 141 VEEVMKYYNNCLILRLRMPVSDDL-HPRNFVTKIAKYDRVVDIPNSNTILHDLLPLSLAM 199
Query: 593 ARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDVT 652
A G +NFTNPG ISHNE+L L+++ + P KW NF+LEEQAKV+ A RSN +D T
Sbjct: 200 AEHKDTGVYNFTNPGAISHNEVLTLFRDIVRPSFKWQNFSLEEQAKVIKAGRSNCKLDTT 259
Query: 653 KLKKEFPE 660
KL ++ E
Sbjct: 260 KLTEKAKE 267
Score = 367 (134.2 bits), Expect = 4.3e-70, Sum P(2) = 4.3e-70
Identities = 69/138 (50%), Positives = 92/138 (66%)
Query: 373 KFLIYGKTGWIGGLLGKYCKDKGIAFEFGTGRLEDKNSLLDDMKRVRPTHVLNAAGITGR 432
+FLI+G GW+ G L K +G T R+E++ +L ++++V+PTHVLN AG TGR
Sbjct: 5 RFLIWGGEGWVAGHLASILKSQGKDVYTTTVRMENREGVLAELEKVKPTHVLNCAGCTGR 64
Query: 433 PNVDWCESHRVETIRTNVMGTLTLADVCKEKNVLLMNFATGCIYEYDSMHPQGSSIGFKE 492
PNVDWCE ++ T+R+NV+GTL L D C +K + FATGCIY+YD HP GF E
Sbjct: 65 PNVDWCEDNKEATMRSNVIGTLNLTDACFQKGIHCTVFATGCIYQYDDAHPWDGP-GFLE 123
Query: 493 DDEPNFTRSFYSKTKAMV 510
D+ NF SFYS+TKA V
Sbjct: 124 TDKANFAGSFYSETKAHV 141
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 130/319 (40%), Positives = 203/319 (63%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
IL+TG AGFIGS+ + ++++Y Y+I+ D L Y +L N+ + PN+ F+KG+I
Sbjct: 3 ILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQN 62
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
+L+ +++ + I++FAA++HVD S N F + N+ GT LLE K +K +
Sbjct: 63 GELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIK-LV 121
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
VSTDEVYG E + L P +PYS++KA A+M+ +AY+++Y LP I TR +N
Sbjct: 122 QVSTDEVYGSLGKTGRF--TEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSN 179
Query: 195 VYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVY 254
YGP Q+PEKLIP + A++G++LP++G+G NVR +L+ D A DV+LH+G +G VY
Sbjct: 180 NYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGEVY 239
Query: 255 NVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEKTP 313
N+G E++ ++V I TL + +K I YV DR +D RY ++ +K+K W+ K
Sbjct: 240 NIGGNNEKTNVEVVEQIITLLG-KTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYT 298
Query: 314 WEEGLKLTLEWYKKNPHWW 332
+E+GL+ T++WY+KN WW
Sbjct: 299 FEQGLQETVQWYEKNEEWW 317
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 135/327 (41%), Positives = 206/327 (62%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+ +L+TG AGFIGSH+ L +P + I+ +D L YCS+LKNL +AS ++ F+ GD+
Sbjct: 7 RTVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDV 66
Query: 73 TCADL-MNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
C L + +L +E ID + H AA+THV+NSF F N+ GT VL+ A L V+
Sbjct: 67 -CDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRA-SLEASVQ 124
Query: 132 RFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
RFI++STDEVYG++ D D E S PTNPYS +KA AE +V +Y + P + T
Sbjct: 125 RFIYISTDEVYGDSVDQPFD----ELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVIT 180
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVI 250
R +NVYGP Q EK+IP+F+ L + Q+ I G+G R +LY +DV +AF ++ +G++
Sbjct: 181 RSSNVYGPRQHHEKVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGIL 240
Query: 251 GHVYNVGTKKERSVLDVAADIC--TLFKLEPEKT---IHYVQDRPFNDHRYFLDDQKLKR 305
G +YN+GT E ++ +A ++ T+ + E + +V+DRP + RY ++ KL R
Sbjct: 241 GEIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMNSVKLHR 300
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWW 332
LGW+ K W EG++ T++WY++NP++W
Sbjct: 301 LGWRPKVAWTEGIRRTVQWYEENPNYW 327
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 141/341 (41%), Positives = 205/341 (60%)
Query: 9 SYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
++ P +L+TG AGFIGS+ N + P ++ LD L Y +L+NL +P ++F+
Sbjct: 4 TFSPSAVLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFV 63
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL-- 126
KGDI ADL+ +L E ID ++HFAA++HVD S F N+ GT VLLE +
Sbjct: 64 KGDIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHW 123
Query: 127 -TGQVKRF--IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
+G ++RF +HVSTDEVYG T E+ E + L P +PYSA+KAG+++LV AY+ ++
Sbjct: 124 ESGAIERFRFLHVSTDEVYG-TLGETGYFTEE-TPLAPNSPYSASKAGSDLLVRAYNETF 181
Query: 184 GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDV 243
GLP +TTR +N YGP QFPEKLIP I + G+ LP++G+G NVR +L+ D + A +
Sbjct: 182 GLPVLTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIET 241
Query: 244 ILHRGVIGHVYNVGTKKERSVLDVAADICTLF--KL-----EPEKTIHYVQDRPFNDHRY 296
+L G G V+NVG E +D+ +C L +L E I +V+DR +D RY
Sbjct: 242 VLKGGKPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKDRLGHDRRY 301
Query: 297 FLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDVT 336
+ K+KR LGW+ +E G+ T++WY N W +VT
Sbjct: 302 AISAAKIKRELGWEPSYTFERGIAETVDWYLANRAWVDEVT 342
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 129/317 (40%), Positives = 191/317 (60%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYP-DYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KIL+TG AGFIGS ++ Y D+E++ +DKL Y L+ + R KF K D+
Sbjct: 2 KILVTGGAGFIGS----AFVRKYAYDHELIIVDKLTYAGDLRRIEEVR--DRIKFYKADV 55
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + E + ++HFAA++HVD S + F N+ GT V+L+A + G +++
Sbjct: 56 ADKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYG-IEK 114
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
F+H+STDEVYGE E E S L P +PYS +KA A+ML AYHR+YGLP I R
Sbjct: 115 FVHISTDEVYGELGKEGQF--TEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARP 172
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
N YGP Q+PEKLIP I A+ + +P++G G NVR +LY D EA ++L +G G
Sbjct: 173 CNNYGPWQYPEKLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCIEAVYLLLQKGKPGE 232
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLGWKEK 311
YN+G+ +E+ ++V +I + +PE I +V+DRP +D RY L+ +K+K WK K
Sbjct: 233 AYNIGSGEEKGNIEVVKEILRILG-KPESLITFVEDRPGHDFRYSLNSKKIKMNYAWKHK 291
Query: 312 TPWEEGLKLTLEWYKKN 328
+ EG++ ++WYKK+
Sbjct: 292 VNFNEGIRFVIDWYKKH 308
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 145/340 (42%), Positives = 195/340 (57%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TG AGFIGS V +I N D +V +DKL Y +L++L S + F DI
Sbjct: 2 KILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK-----LTG 128
A M+ + D +MH AA++HVD S F NI GT+VLLEA + L
Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND 120
Query: 129 QVK---RFIHVSTDEVYGETDMESDIGNPEASQLL-------PTNPYSATKAGAEMLVMA 178
+ K RF H+STDEVYG+ + N EA L P++PYSA+KA ++ LV A
Sbjct: 121 EKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
+ R+YGLPTI T +N YGP FPEKLIP IL A++G+ LPI+G G +R +LY D A
Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEP-EKT----IHYVQDRPFN 292
A ++ G G YN+G E+ +DV IC L ++ P EK+ I YV DRP +
Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHW 331
D RY +D K+ R LGWK + +E G++ T+EWY N +W
Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 141/342 (41%), Positives = 201/342 (58%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KIL+TG AGFIGS V +I+N D +V +DKL Y +L++L +P + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDI 60
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK- 131
++ + D +MH AA++HVD S G++ EF NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 132 -------RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
RF H+STDEVYG+ D+ E + P++PYSA+KA ++ LV A+ R+YG
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFT-ETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LPTI T +N YGP FPEKLIP IL A+ G+ LP++G+G +R +L+ D A A +
Sbjct: 180 LPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQV 239
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFK-LEPEKT---------IHYVQDRPFNDH 294
+ GV+G YN+G E++ ++V IC L + L PEK I +VQDRP +D
Sbjct: 240 VTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDV 299
Query: 295 RYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDV 335
RY +D K++R LGW +E GL+ T++WY N WW +V
Sbjct: 300 RYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNV 341
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 147/344 (42%), Positives = 192/344 (55%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KILITG AGFIGS + +I D +V +DKL Y +L +L P S F F K DI
Sbjct: 2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 73 TC--ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK----- 125
C A+L + D +MH AA++HVD S F NI GT+ LLEA +
Sbjct: 61 -CDRAELAR-VFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNA 118
Query: 126 LTGQVK---RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS 182
LT K RF H+STDEVYG+ D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 119 LTEDKKSAFRFHHISTDEVYGDLHSTDDFFT-ETTPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 183 YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242
YGLPT+ T +N YGP FPEKLIP IL A+ G+ LP++GNG +R +LY D A A
Sbjct: 178 YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALY 237
Query: 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFK-LEPEK---TIHY------VQDRPFN 292
+ G +G YN+G ER LDV IC L + L P K HY V DRP +
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGH 297
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDV 335
D RY +D K+ R LGW + +E G++ T++WY N WW V
Sbjct: 298 DLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 341
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 146/348 (41%), Positives = 197/348 (56%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TG AGFIGS V +I N D +V +DKL Y + ++L S + F DI
Sbjct: 2 KILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNRESLADVSDSERYVFEHADIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK-----LTG 128
A M + D +MH AA++HVD S F NI GT+VLLEA + L
Sbjct: 61 DAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120
Query: 129 QVK---RFIHVSTDEVYGETDMESDIGNPEASQLL-------PTNPYSATKAGAEMLVMA 178
K RF H+STDEVYG+ ++ N E L P++PYSA+KA ++ LV A
Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
+ R+YGLPTI T +N YGP FPEKLIP IL A++G+ LPI+G G +R +LY D A
Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEP-EKT----IHYVQDRPFN 292
A ++ G G YN+G E+ +DV IC L ++ P EK+ I YV DRP +
Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDV-TGA 338
D RY +D +K+ R LGWK + +E G++ T+EWY N W +V +GA
Sbjct: 301 DRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGA 348
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 145/348 (41%), Positives = 200/348 (57%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TG AGFIGS V +I N D +V +DKL Y +L++L S + F DI
Sbjct: 2 KILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLAEISDSERYSFENADIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK-----LTG 128
A+ +D +MH AA++HVD S F NI GT+VLLEA + L
Sbjct: 61 DAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120
Query: 129 QVK---RFIHVSTDEVYGETDMESDIGNPEASQLL-------PTNPYSATKAGAEMLVMA 178
+ K RF H+STDEVYG+ ++ + E QL P++PYSA+KA ++ LV A
Sbjct: 121 EKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
+ R+YGLPTI + +N YGP FPEKLIP IL A++G+ LPI+G G +R +LY D A
Sbjct: 181 WKRTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEP-EKT----IHYVQDRPFN 292
A ++ G G YN+G E+ +DV IC L ++ P EK+ I YV DRP +
Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGH 300
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDV-TGA 338
D RY +D K+ R LGWK + +E G++ T+EWY N +W +V +GA
Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWVENVKSGA 348
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 145/348 (41%), Positives = 199/348 (57%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KILITG AGFIGS V +IKN D +V +DKL Y +L++L S + F DI
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK----LTGQ 129
+ + + D +MH AA++HVD S F NI GT+ LLE + G+
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 130 VK----RFIHVSTDEVYGET----DMESDIGNP---EASQLLPTNPYSATKAGAEMLVMA 178
K RF H+STDEVYG+ ++E+ + P E + P++PYSA+KA ++ LV A
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
+ R+YGLPTI T +N YGP FPEKLIP IL A++G+ LPI+G G +R +LY D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLF-KLEPEKT-----IHYVQDRPFN 292
A +++ G G YN+G E+ LDV IC L ++ P+ T I YV DRP +
Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPHWWGDV-TGA 338
D RY +D K+ R LGWK +E G++ T+EWY N W +V +GA
Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGA 348
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 139/335 (41%), Positives = 198/335 (59%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+KIL+TG AGFIGS V +I+N D +V LDKL Y +L++L +P + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 60
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK- 131
++ + D +MH AA++HVD S G++ EF NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 132 -------RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
RF H+STDEVYG+ D+ E + P++PYSA+KA ++ LV A+ R+YG
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFT-ETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LPTI T +N YGP FPEKLIP IL A+ G+ LP++G+G +R +L+ D A A +
Sbjct: 180 LPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQV 239
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFK-LEPEKT---------IHYVQDRPFNDH 294
+ GV+G YN+G E++ ++V IC L + L PEK I +VQDRP +D
Sbjct: 240 VTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDA 299
Query: 295 RYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
RY +D K++R LGW+ +E GL+ T++WY N
Sbjct: 300 RYAVDTAKIRRDLGWQPLETFESGLRKTVQWYLDN 334
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 138/335 (41%), Positives = 197/335 (58%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K IL+TG AGFIGS V +I+N D +V LDKL Y +L++L +P + F + DI
Sbjct: 7 KNILVTGGAGFIGSAVVRHIIQNTRD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 65
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK- 131
++ + D +MH AA++HVD + G++ EF NI GT LLEA + Q
Sbjct: 66 CDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMP 125
Query: 132 -------RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
RF H+STDEVYG+ D+ E + P++PYSA+KA A+ LV A+ R+Y
Sbjct: 126 SEKREAFRFHHISTDEVYGDLHGTDDLFT-ETTPYAPSSPYSASKAAADHLVRAWQRTYR 184
Query: 185 LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVI 244
LP+I + +N YGP QFPEKLIP IL A+ G+ LP++G+G+ +R +L+ D A A +
Sbjct: 185 LPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQV 244
Query: 245 LHRGVIGHVYNVGTKKERSVLDVAADICTLFK-LEPEKT---------IHYVQDRPFNDH 294
+ GV+G YN+G E++ L+V IC L + L PEK I +VQDRP +D
Sbjct: 245 VTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDA 304
Query: 295 RYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
RY +D K++R LGW +E GL+ T++WY N
Sbjct: 305 RYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 130/325 (40%), Positives = 190/325 (58%)
Query: 14 KILITGAAGFIGSHVTNRLIKN-----YPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
KIL+TG AGFIGSH LI P ++ +DKL Y +L+NL + A P F F+
Sbjct: 2 KILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFV 61
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
+GDI L+ L+ DT+ HFAA+THVD S S F +N+ GT VLL+A L
Sbjct: 62 RGDICDEGLIEGLMARH--DTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAA-LRH 118
Query: 129 QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
+ RF+HVSTDEVYG D S E L P +PY+A+KAG+++L +AYH+++G+ +
Sbjct: 119 HIGRFLHVSTDEVYGSIDTGSWA---EGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVV 175
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
TR +N YGP QFPEK+IP F+ + G +P++G+G N+R +L+ +D + L G
Sbjct: 176 VTRCSNNYGPRQFPEKMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAG 235
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLG 307
G VY++G E + L++ +I P I +V DR +D RY LD K+ LG
Sbjct: 236 RAGEVYHIGGGWEATNLELT-EILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGELG 294
Query: 308 WKEKTPWEEGLKLTLEWYKKNPHWW 332
++ + + +G+ T+ WY+ N WW
Sbjct: 295 YRPRVDFTDGIAETVAWYRANRSWW 319
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 388 (141.6 bits), Expect = 5.1e-59, Sum P(2) = 5.1e-59
Identities = 79/184 (42%), Positives = 111/184 (60%)
Query: 155 EASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAM 214
E + P++PYSA+KA ++ LV A+ R+YG PTI T +N YGP FPEKLIP IL A+
Sbjct: 175 ETTPYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNAL 234
Query: 215 KGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTL 274
+G+ LPI+G G +R +LY D A A ++ G +G YN+G E+ L+V IC++
Sbjct: 235 EGKPLPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVVQTICSI 294
Query: 275 F-KLEPEKT-----IHYVQDRPFNDHRYFLDDQKLK-RLGWKEKTPWEEGLKLTLEWYKK 327
L P+ T I YV DRP +D RY +D K+ L W+ + +E GL+ T+EWY
Sbjct: 295 LDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGLRKTVEWYLA 354
Query: 328 NPHW 331
N W
Sbjct: 355 NQEW 358
Score = 248 (92.4 bits), Expect = 5.1e-59, Sum P(2) = 5.1e-59
Identities = 64/154 (41%), Positives = 84/154 (54%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TG AGFIGS V +I N D +V +DKL Y +L++L SP + F K DI
Sbjct: 2 KILVTGGAGFIGSAVVRHIIGNTQDC-VVNVDKLTYAGNLESLTSVADSPRYTFEKVDIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK-----LTG 128
+ + D +MH AA++HVD S S +F NI GT+ LLEA + L
Sbjct: 61 DRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNT 120
Query: 129 QVK---RFIHVSTDEVYGETDMESDIGNPEASQL 159
+ K RF H+STDEVYG+ +I N E S L
Sbjct: 121 ERKSAFRFHHISTDEVYGDLPHPDEI-NVECSML 153
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 133/334 (39%), Positives = 182/334 (54%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TG AGFIG + + +V LD L Y +L L + + F+KGDI
Sbjct: 5 LVTGGAGFIGGNFVLEAVSR--GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDG 62
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVK 131
L+ LL D +++FAA++HVD S F N+ GT LLEA K +
Sbjct: 63 ALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTR 122
Query: 132 R----FIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
R F+HVSTDEVYG + G E + P +PYSA+KA ++ LV A+H +YGLP
Sbjct: 123 RDAFRFLHVSTDEVYGTL---GETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
+TT +N YGP FPEKLIP I A+ G+ LP++G+G VR +L+ +D EA +L
Sbjct: 180 VLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLA 239
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKL-------EP-EKTIHYVQDRPFNDHRYFL 298
+G +G YNVG ER ++V IC L +P E I YV DRP +D RY +
Sbjct: 240 KGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAI 299
Query: 299 DDQKLK-RLGWKEKTPWEEGLKLTLEWYKKNPHW 331
D KLK LGW+ +E+G+ LT++WY N W
Sbjct: 300 DASKLKDELGWEPAYTFEQGIALTVDWYLTNQTW 333
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 132/334 (39%), Positives = 181/334 (54%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TG AGFIG + + +V LD L Y +L L + + F+KGDI
Sbjct: 5 LVTGRAGFIGGNFVLEAVSR--GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDG 62
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC----KLTGQVK 131
L+ LL D +++FAA++HVD S F N+ GT LLEA K +
Sbjct: 63 ALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTR 122
Query: 132 R----FIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
R F+HVSTDEVYG + G E + P +PYSA+KA ++ LV A+H +YGLP
Sbjct: 123 RDAFRFLHVSTDEVYGTL---GETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
+TT +N YGP FPEKLIP I A+ G+ LP++G+G VR +L+ +D EA +L
Sbjct: 180 VLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLA 239
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKL-------EP-EKTIHYVQDRPFNDHRYFL 298
+G +G YNVG ER ++V IC L +P E I YV DRP +D RY +
Sbjct: 240 KGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAI 299
Query: 299 DDQKLK-RLGWKEKTPWEEGLKLTLEWYKKNPHW 331
D KLK LGW+ +E+G+ T++WY N W
Sbjct: 300 DASKLKDELGWEPAYTFEQGIAQTVDWYLTNQTW 333
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 127/322 (39%), Positives = 192/322 (59%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
++L+TG AGFIG++ + ++ +PD + LD L Y ++L + + ++GDIT
Sbjct: 2 RLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESL--ADVEDAIRLVQGDIT 59
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
A+L++ L V+E D ++HFAA++HVDN+ N F + N+ GT +LEA + G R
Sbjct: 60 DAELVSQL-VAES-DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGV--RL 115
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL-PTITTRG 192
H+STDEVYG+ +++ E++ P++PYSATKAGA+MLV A+ RSYG+ TI+
Sbjct: 116 HHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCS 175
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
NN YGP Q EK IP+ I + G++ ++G G+NVR +++ D A IL RG IG
Sbjct: 176 NN-YGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGR 234
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL-KRLGWKEK 311
Y + ++ ER L V + L +P+ H V DR +D RY +D L L W K
Sbjct: 235 TYLISSEGERDNLTVLRTLLRLMDRDPDDFDH-VTDRVGHDLRYAIDPSTLYDELCWAPK 293
Query: 312 -TPWEEGLKLTLEWYKKNPHWW 332
T +EEGL+ T++WY+ N WW
Sbjct: 294 HTDFEEGLRTTIDWYRDNESWW 315
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 128/333 (38%), Positives = 191/333 (57%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
IL+TG +GFIGS + +I + D+ ++ +DKL Y ++ L +P + F K DI
Sbjct: 4 ILVTGGSGFIGSALIRYIINHTQDF-VINIDKLTYAANQSALREVENNPRYVFEKVDICD 62
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK----LTGQV 130
+++ + D +MH AA++HVD S + +F NI GT+ LLE K +
Sbjct: 63 LNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDEA 122
Query: 131 K----RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
K RF H+STDEVYG+ + S+ E S P++PYSA+KA + LV A+HR+YGLP
Sbjct: 123 KKTTFRFHHISTDEVYGDLSL-SEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYGLP 181
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
I T +N YG Q EKLIP I A+ G+ LPI+G+G +R +L+ D +A ++L
Sbjct: 182 VIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYLVLT 241
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFK-LEPEKTIH---------YVQDRPFNDHRY 296
+G +G YN+G E++ L+V IC L + L P K H +V+DRP +D RY
Sbjct: 242 KGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPGHDVRY 301
Query: 297 FLDDQKLK-RLGWKEKTPWEEGLKLTLEWYKKN 328
LD K+ LGW+ + +E+GL+ T++WY N
Sbjct: 302 SLDCSKIHAELGWQPQITFEQGLRQTVKWYLFN 334
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 117/312 (37%), Positives = 183/312 (58%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+I+++G AGFIG H ++K YP++ +DKL+Y S+ + ++ NF+F+ D+
Sbjct: 7 KRIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDL 66
Query: 73 TCADLMNYLL-VSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ D + YLL +++ I++FAA++ VD SF + FT NNI T LLE +L +
Sbjct: 67 S--DNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIG 124
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
F+H+STDEVYG+ E D N E + + PTNPYSA+KA ++++ +Y SY LP R
Sbjct: 125 YFLHISTDEVYGDV-YEGD--NKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--- 248
NNVYGP Q+PEK+IP I + + +P+HG G+N R YLY D+ A + + +
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMT 241
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGW 308
+ +YN+G E LD + I + ++ I +++DR +ND Y +D K+ LGW
Sbjct: 242 TVNQIYNIGGTDE---LDNLSLIKLIMEIFGRGEIQFIKDRNYNDTNYSIDTTKIHNLGW 298
Query: 309 KEKTPWEEGLKL 320
K +GL+L
Sbjct: 299 SPKISLVQGLQL 310
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 117/312 (37%), Positives = 183/312 (58%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+I+++G AGFIG H ++K YP++ +DKL+Y S+ + ++ NF+F+ D+
Sbjct: 7 KRIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDL 66
Query: 73 TCADLMNYLL-VSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ D + YLL +++ I++FAA++ VD SF + FT NNI T LLE +L +
Sbjct: 67 S--DNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIG 124
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
F+H+STDEVYG+ E D N E + + PTNPYSA+KA ++++ +Y SY LP R
Sbjct: 125 YFLHISTDEVYGDV-YEGD--NKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--- 248
NNVYGP Q+PEK+IP I + + +P+HG G+N R YLY D+ A + + +
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMT 241
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGW 308
+ +YN+G E LD + I + ++ I +++DR +ND Y +D K+ LGW
Sbjct: 242 TVNQIYNIGGTDE---LDNLSLIKLIMEIFGRGEIQFIKDRNYNDTNYSIDTTKIHNLGW 298
Query: 309 KEKTPWEEGLKL 320
K +GL+L
Sbjct: 299 SPKISLVQGLQL 310
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 122/326 (37%), Positives = 190/326 (58%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPS-RASPNFKFLK 69
+P +LITG GFIGS+ N + + + + DKL + +S ++ R SP +KF++
Sbjct: 7 EPTCVLITGGCGFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYKFVE 66
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
+ + L +D ++HFAA THVD S+ + +NI T LLE+ +
Sbjct: 67 AALEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPY 126
Query: 130 --VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
VK+ +H+STDEVYG++ ++ + AS PTNPY+A+KA EM++ +Y SY LP
Sbjct: 127 KGVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPY 186
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
+ R NNVYGP Q KLIPKF LA+ G+ P+ G+G + RS++Y D +EA +
Sbjct: 187 VMVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVALE 246
Query: 248 GVIGHVYNVGTKKERSVLDVAADI-CTLFKL---EPEK-TIHYVQDRPFNDHRYFLDDQK 302
G +G +YN+GT E + +++ I T+ KL EP T + DRP++D RY++D K
Sbjct: 247 GTLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREPTAPTFAPIPDRPYHDRRYYIDFSK 306
Query: 303 LKR-LGWKEKTPWEEGLKLTLEWYKK 327
++ +GW+ TP+ EGL T+++Y K
Sbjct: 307 IRNAMGWQCTTPFSEGLMKTIDYYVK 332
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 125/321 (38%), Positives = 182/321 (56%)
Query: 15 ILITGAAGFIGSHVTNRLIK--NYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+L+TGAAGFIGS L+ PD + ALD L Y + NL R P ++F +GDI
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
C D +++ G D ++H AA++HVD S ++ F N++GT LL+A G V
Sbjct: 65 -C-DAPGRRVMA-GQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHG-VAS 120
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
F+ VSTDEVYG + S E L P +PYSA+KA ++L +A+H S+GL TR
Sbjct: 121 FVQVSTDEVYGSLEHGSWT---EDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRC 177
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
+N YGP QFPEKLIP+FI L M G ++P++G+G NVR +L+ D + + RG G
Sbjct: 178 SNNYGPRQFPEKLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGR 237
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LGWKEK 311
VYN+G S ++ + + ++ YV+DR +D RY +D +++R LG+
Sbjct: 238 VYNIGGGATLSNKELVGLLLEAAGAD-WGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPA 296
Query: 312 TPWEEGLKLTLEWYKKNPHWW 332
+GL T+ WY K+ WW
Sbjct: 297 VDLADGLAATVAWYHKHRSWW 317
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 129/334 (38%), Positives = 190/334 (56%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+IL+TG AGFIGS + LI+ + ++ DKL Y S ++L + + F++ DI
Sbjct: 2 RILVTGGAGFIGSALVRMLIEQ-TESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK----LTGQ 129
+ +L D +MH AA++HVD S EF NI GT+ LLEAC+ GQ
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120
Query: 130 VK----RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
+ R H+STDEV+G E+ + + E S P++PYSA+KA A+ LV A+HR+Y L
Sbjct: 121 AQQRRFRLHHISTDEVFGSLT-ETGLFS-ETSAYDPSSPYSASKASADHLVRAWHRTYAL 178
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
P + T +N YGP Q+PEKLIP + A++ + LPI+GNG VR +LY D +A ++
Sbjct: 179 PIVITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKALYLVA 238
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFK----LEPEKT----------IHYVQDRPF 291
+G +G YN+G E++ L V IC+L + P+ I YV DRP
Sbjct: 239 TQGQLGQTYNIGGSCEQTNLTVVRHICSLLEELVPTHPQSLAMGNAGFADLIQYVVDRPG 298
Query: 292 NDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEW 324
+D RY +D K++R LGW+ + +E GL+ T+EW
Sbjct: 299 HDVRYAIDASKIQRELGWRPQESFESGLRKTVEW 332
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 126/322 (39%), Positives = 189/322 (58%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
++L+TG AGFIG++ + ++ I LD L Y S ++L P + + ++GDIT
Sbjct: 2 RLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAP--VADRIRLVQGDIT 59
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
A L+ L V+E D ++HFAA+THVDN+ + F ++N+ GT+ +LEA + R
Sbjct: 60 DAALVGDL-VAES-DAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNV--RL 115
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL-PTITTRG 192
HVSTDEVYG+ ++++ E + P++PYS+TKA A++LV A+ RSYG+ TI+
Sbjct: 116 HHVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCS 175
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
NN YGP Q EK IP+ I + G++ ++G G+NVR +++ D A IL G IG
Sbjct: 176 NN-YGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIGR 234
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLGWKEK 311
Y +G + ER+ L V I L +P+ H V DR +D RY +D L+ LGW K
Sbjct: 235 TYLIGAECERNNLTVMRTILKLMGRDPDDFDH-VTDRAGHDLRYAIDPSTLQDELGWAPK 293
Query: 312 -TPWEEGLKLTLEWYKKNPHWW 332
T +E GL T++WY+ N WW
Sbjct: 294 HTDFEAGLTDTIDWYRANESWW 315
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 417 (151.9 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 108/297 (36%), Positives = 164/297 (55%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR 60
M+G+++ YK LITG AGFIGS+ + + YPD+ +DKL Y S+ + S+
Sbjct: 1 MTGDYK--EYKGYA-LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSK 57
Query: 61 A--SPNFKFLKGDITC--ADLMNYLLVSEGIDTIMH---FAAQTHVDNSFGNSFEFTNNN 113
PNF+FL+ D+ L +++ I+ I H FAA++ VD SF + FT NN
Sbjct: 58 VLNQPNFRFLEMDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNN 117
Query: 114 IYGTHVLLEACK-LTGQVKR------FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYS 166
I T LLE + L G+ + F+HVSTDEVYGE D + + E S+L PT+PY+
Sbjct: 118 ILSTQNLLECVRILLGKKEELRNRLNFVHVSTDEVYGEQDENASVD--EKSKLNPTSPYA 175
Query: 167 ATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIP-------KFI-LLAMKGQQ 218
A+KA ++++ +Y SY + R NNVYGP Q+ EKLIP KFI + K Q
Sbjct: 176 ASKAAVDLIIQSYRYSYKISVTVIRANNVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQ 235
Query: 219 --LPIHGNGSNVRSYLYCADVAEAFDVI-LHRGVIGHVYN--VGTKKERSVLDVAAD 270
+ +HG+G + R YL+ D A D++ + +G VY+ + +K + ++ +D
Sbjct: 236 DKITLHGDGLHKRKYLHIYDFINAIDLVWMKQG--SEVYHSTLESKMSGQIFNIGSD 290
Score = 143 (55.4 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 238 AEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLF--------KLEPEKTIHYVQDR 289
+E + L + G ++N+G+ E L + IC F L+ K I +VQDR
Sbjct: 269 SEVYHSTLESKMSGQIFNIGSDDEIDNLSLVKFICDYFLYRKLSLKNLDYSKYITFVQDR 328
Query: 290 PFNDHRYFLDDQKLKRLGWKEKTPWEEGL-KLTLEWY 325
+ND RY L+ +K+K LGW+ + P E GL KL E+Y
Sbjct: 329 NYNDSRYSLNYEKIKSLGWRPQIPLETGLRKLIDEYY 365
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 124/333 (37%), Positives = 191/333 (57%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K I++TG AGFIGS+ + + N+PD + LDKL Y + NL + + GDI
Sbjct: 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGD-RVELVVGDI 63
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
++L++ L D I+H+AA++H DNS + F N GT++LLEA + R
Sbjct: 64 ADSELVDKLAAKA--DAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDI--R 119
Query: 133 FIHVSTDEVYGETDMESDI-GNPEA--------SQLLPTNPYSATKAGAEMLVMAYHRSY 183
F HVSTDEVYG+ + D+ G+ E ++ P++PYS+TKA ++++V A+ RS+
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSF 179
Query: 184 GLP-TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242
G+ TI+ NN YGP Q EK IP+ I + G + ++G G NVR +++ D +
Sbjct: 180 GVKATISNCSNN-YGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVW 238
Query: 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKL-EPEKTIHYVQDRPFNDHRYFLDDQ 301
IL +G IG Y +G E++ +V I L K+ +P+ +V DR +D RY +D
Sbjct: 239 AILTKGRIGETYLIGADGEKNNKEVLELI--LEKMSQPKNAYDHVTDRAGHDLRYAIDST 296
Query: 302 KLKR-LGWKEK-TPWEEGLKLTLEWYKKNPHWW 332
KL+ LGWK + T +EEGL+ T++WY ++ WW
Sbjct: 297 KLREELGWKPQFTNFEEGLEDTIKWYTEHEDWW 329
>DICTYBASE|DDB_G0274991 [details] [associations]
symbol:DDB_G0274991 "NAD-dependent
epimerase/dehydratase family protein" species:44689 "Dictyostelium
discoideum" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AAFI02000012 RefSeq:XP_644280.1 STRING:Q554P3
EnsemblProtists:DDB0217586 GeneID:8619708 KEGG:ddi:DDB_G0274991
eggNOG:NOG238479 InParanoid:Q554P3 OMA:ILKCGRS
ProtClustDB:CLSZ2431047 Uniprot:Q554P3
Length = 172
Score = 407 (148.3 bits), Expect = 9.1e-43, Sum P(2) = 9.1e-43
Identities = 83/148 (56%), Positives = 105/148 (70%)
Query: 533 VEGLLKAYE-NVCTLRLRMPISSDLSNPRNFVTKLARYNKVVNIPNSMTVLDEMLPIAIE 591
VE L K YE N TLRLRMPIS +L+ PRNF+TK+ Y +VVNIPNS TVL ++LPIAI+
Sbjct: 27 VEKLTKHYESNTLTLRLRMPISENLNEPRNFITKIINYERVVNIPNSCTVLPDLLPIAID 86
Query: 592 MARRNCRGAWNFTNPGVISHNEILELYKEYIDPQLKWSNFNLEEQAKVLVAPRSNNHMDV 651
M+ + +G +NF NPGVISHNEIL+LY I+P K+ NF EQ+K+L RSNNH+D
Sbjct: 87 MSIKQIKGVYNFVNPGVISHNEILDLYTLLINPNFKYQNFTEIEQSKILKCGRSNNHLDT 146
Query: 652 TKLKKEFPEVLSIKDSIIKYVLEPNKKK 679
TKL+ +P + +IK SI L N KK
Sbjct: 147 TKLESLYPTIPNIKKSIENIFL--NSKK 172
Score = 73 (30.8 bits), Expect = 9.1e-43, Sum P(2) = 9.1e-43
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 486 SSIGFKEDDEPNFTRSFYSKTKAMVTFLS 514
S IGFKE++E N+ S YS TK MV L+
Sbjct: 3 SGIGFKEEEEFNYFESHYSVTKQMVEKLT 31
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 368 (134.6 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 104/323 (32%), Positives = 162/323 (50%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K IL+TGA GFIGSH+ L+K +++ AL + + + +L S + + + GD+
Sbjct: 2 KNILVTGADGFIGSHLCESLVKK--GFKVRALSQYNSFNFWGHLEKSPFLKDMEVVSGDL 59
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
D +++ ID I H A + S+ + + N+ GT +LEA K ++
Sbjct: 60 R--DSFFCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK-KNEISH 116
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
FIH ST EVYG T I E L P +PYSA+K A+M+ ++Y+ S+ L R
Sbjct: 117 FIHTSTSEVYG-TAFYVPID--EKHPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARP 173
Query: 193 NNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH 252
N YGP Q +IP I + G + G+ S R + D E F +L+ G
Sbjct: 174 FNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGE 233
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD----RPFNDHRYFL--DDQKLKRL 306
VYN+G+ E S+ +V + + K+ K + +QD RP N + L D KLK+
Sbjct: 234 VYNIGSGVEYSMQEV---LNLIQKILDSK-VKIIQDEQRLRPKNSEVFRLCCDANKLKKA 289
Query: 307 -GWKEKTPWEEGLKLTLEWYKKN 328
W+ K EEGL+ ++E++K+N
Sbjct: 290 TNWQSKISLEEGLRQSIEYFKEN 312
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 342 (125.4 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 100/324 (30%), Positives = 154/324 (47%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKF--LK 69
KK ++ G AG IGSH +RL++ D E++ D + +NL + P K +
Sbjct: 7 KKFVVIGGAGLIGSHTVDRLLQE--DVAEVIIYDNF-VRGTRENLAQALRDPRTKIYDIG 63
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI D++N L +G+D + HFAA + + NI GT +LE C G
Sbjct: 64 GDINQTDILNTAL--KGVDGVFHFAALWLLQ-CYEYPRSAFQTNIQGTFNVLETCVAQG- 119
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
VKR + S+ VYG+ +E + EA Y ATK E + AYH YGLP +
Sbjct: 120 VKRLVFSSSASVYGDA-LEEPM--TEAHPFNSRTFYGATKIAGEAMATAYHHRYGLPFVG 176
Query: 190 TRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
R NVYGP Q +I K + KGQ + ++G+GS ++Y D A A +
Sbjct: 177 LRYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAM 236
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV-QDRPFNDHRYFLDDQKLK 304
+ YNVGT K S+L++A +I + I ++ Q F +R + +
Sbjct: 237 KADTVDEYYNVGTGKRTSILELAKEIQKI--TGTSDNIQFLPQGTTFVKNRIGCPKKAAE 294
Query: 305 RLGWKEKTPWEEGLKLTLEWYKKN 328
++G+K + EGL+ +EW + +
Sbjct: 295 QIGFKAEVGLTEGLQRLIEWRRSH 318
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 286 (105.7 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 74/230 (32%), Positives = 117/230 (50%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-DYCS-SLK--NLHPSRASPNFKFLK 69
K L+TGAAGFIG++V+ RL +E+V +D L DY +LK L P A NF F+K
Sbjct: 2 KYLVTGAAGFIGANVSKRLCAM--GHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
D+ + + L +G ++H AAQ V S N + ++N+ G +LE C+ +
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR-HHK 118
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
++ ++ S+ VYG + + E S P + Y+ATK E++ Y Y LPT
Sbjct: 119 IEHLVYASSSSVYG-LNQKMPFST-EDSVDHPISLYAATKKANELMSHTYSHLYQLPTTG 176
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239
R VYGP P+ + KF + G+ + ++ +G R + Y D+ E
Sbjct: 177 LRFFTVYGPWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVE 226
Score = 68 (29.0 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL-KRLGWKEK 311
V+N+G +LD + +E +K ++ +P + H + D + L K +G+K +
Sbjct: 258 VFNIGNGSPVQLLDFITALERALGIEAKK--QFLPMQPGDVHATWADTEDLFKAVGYKSQ 315
Query: 312 TPWEEGLKLTLEWYK 326
+ G+ ++WY+
Sbjct: 316 VDIDTGVAKFVDWYR 330
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 286 (105.7 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 74/230 (32%), Positives = 117/230 (50%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-DYCS-SLK--NLHPSRASPNFKFLK 69
K L+TGAAGFIG++V+ RL +E+V +D L DY +LK L P A NF F+K
Sbjct: 2 KYLVTGAAGFIGANVSKRLCAM--GHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
D+ + + L +G ++H AAQ V S N + ++N+ G +LE C+ +
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR-HHK 118
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
++ ++ S+ VYG + + E S P + Y+ATK E++ Y Y LPT
Sbjct: 119 IEHLVYASSSSVYG-LNQKMPFST-EDSVDHPISLYAATKKANELMSHTYSHLYQLPTTG 176
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239
R VYGP P+ + KF + G+ + ++ +G R + Y D+ E
Sbjct: 177 LRFFTVYGPWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVE 226
Score = 68 (29.0 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL-KRLGWKEK 311
V+N+G +LD + +E +K ++ +P + H + D + L K +G+K +
Sbjct: 258 VFNIGNGSPVQLLDFITALERALGIEAKK--QFLPMQPGDVHATWADTEDLFKAVGYKSQ 315
Query: 312 TPWEEGLKLTLEWYK 326
+ G+ ++WY+
Sbjct: 316 VDIDTGVAKFVDWYR 330
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 270 (100.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 75/238 (31%), Positives = 114/238 (47%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-DYCS-SLK--NLHPSRASPNFKFLKG 70
IL+TGAAGFIG H+T RL+ D +V LD L DY +LK L F F++
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDR-GD-RVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRT 61
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
+ + L + D +++ AAQ V S N + ++N+ G +LE C+ G V
Sbjct: 62 SLADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHG-V 120
Query: 131 KRFIHVSTDEVYG-ETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
K ++ S+ VYG T M I + P + Y+ATK E++ Y YGLPT
Sbjct: 121 KHLVYASSSSVYGANTAMPFSIHHNVDH---PVSLYAATKKANELMAHTYSSLYGLPTTG 177
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
R VYGP P+ + F ++G+ + ++ G R + Y D+ E ++ R
Sbjct: 178 LRFFTVYGPWGRPDMALFLFTKAILEGRPIDVYNFGKMQRDFTYVDDIVEGVTRVMDR 235
Score = 62 (26.9 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ--DRPFNDHRYFLDDQKLKRLGWKE 310
+YN+G +L I + +K + +Q D P Y D + +G+K
Sbjct: 259 IYNIGNNNPVELLAFIEAIEQNLGITAQKNLLPLQAGDVPAT---YADVDDLMNDVGFKP 315
Query: 311 KTPWEEGLKLTLEWYK 326
TP EG++ +EWY+
Sbjct: 316 ATPIGEGIERFVEWYR 331
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 307 (113.1 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 88/320 (27%), Positives = 154/320 (48%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 88
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 89 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 139
Query: 133 FIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199
Query: 191 RGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 200 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 259
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLG 307
V V N+G +E ++L+ A I L E I ++ + + + D +K K LG
Sbjct: 260 VSSPV-NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 316
Query: 308 WKEKTPWEEGLKLTLEWYKK 327
W+ P EEGL + +++K
Sbjct: 317 WEPVVPLEEGLNKAIHYFRK 336
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 267 (99.0 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 72/229 (31%), Positives = 110/229 (48%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-DYCS-SLKNLHPSRAS-PNFKFLKG 70
K L+TGAAGFIGS V RL +++V +D + DY +LK +R +F F+K
Sbjct: 2 KYLVTGAAGFIGSAVVERLCA--AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKM 59
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
DI ++M L ++ D ++H AAQ V S N + ++N+ G +LE C+ QV
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCR-NNQV 118
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
K I+ S+ VYG + P + Y+ATK E++ +Y Y +PT
Sbjct: 119 KHLIYASSSSVYGLNNKVPFSTKDTVDH--PVSLYAATKKSNELMAHSYSHLYNIPTTGL 176
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239
R VYG P+ F + G + I+ NG R + + D+ E
Sbjct: 177 RFFTVYGSWGRPDMAPYIFTKKILNGDTIDINNNGDMWRDFTHVDDIVE 225
Score = 63 (27.2 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL-KRLGWKEK 311
VYN+G S++D I +E +K +Q P + ++ + D Q L K + K
Sbjct: 257 VYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQ--PGDVYQTYADTQDLFKATNYVPK 314
Query: 312 TPWEEGLKLTLEWYK 326
+EG+ + W+K
Sbjct: 315 ISVKEGVAELVVWFK 329
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 267 (99.0 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 72/229 (31%), Positives = 110/229 (48%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-DYCS-SLKNLHPSRAS-PNFKFLKG 70
K L+TGAAGFIGS V RL +++V +D + DY +LK +R +F F+K
Sbjct: 2 KYLVTGAAGFIGSAVVERLCA--AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKM 59
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
DI ++M L ++ D ++H AAQ V S N + ++N+ G +LE C+ QV
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCR-NNQV 118
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
K I+ S+ VYG + P + Y+ATK E++ +Y Y +PT
Sbjct: 119 KHLIYASSSSVYGLNNKVPFSTKDTVDH--PVSLYAATKKSNELMAHSYSHLYNIPTTGL 176
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAE 239
R VYG P+ F + G + I+ NG R + + D+ E
Sbjct: 177 RFFTVYGSWGRPDMAPYIFTKKILNGDTIDINNNGDMWRDFTHVDDIVE 225
Score = 63 (27.2 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 253 VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL-KRLGWKEK 311
VYN+G S++D I +E +K +Q P + ++ + D Q L K + K
Sbjct: 257 VYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQ--PGDVYQTYADTQDLFKATNYVPK 314
Query: 312 TPWEEGLKLTLEWYK 326
+EG+ + W+K
Sbjct: 315 ISVKEGVAELVVWFK 329
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 305 (112.4 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 88/321 (27%), Positives = 152/321 (47%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 66 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 122
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 123 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 173
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNP---YSATKAGAEMLVMAYHRSYGLPTIT 189
+ ST EVYG+ ++ + + P P Y K AE + AY + G+
Sbjct: 174 LLLASTSEVYGDPEVHPQTED-YWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRV 232
Query: 190 TRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 233 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 292
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RL 306
V V N+G +E ++L+ A I L E I ++ + + + D +K K L
Sbjct: 293 NVSSPV-NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLML 349
Query: 307 GWKEKTPWEEGLKLTLEWYKK 327
GW+ P EEGL + +++K
Sbjct: 350 GWEPVVPLEEGLNKAIHYFRK 370
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 305 (112.4 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 95/319 (29%), Positives = 153/319 (47%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ L+TGAAGFIGS + +RL+ + + +V LD NL + F++ DI
Sbjct: 2 RALVTGAAGFIGSTLVDRLLAD--GHSVVGLDNFA-TGRATNLEHLADNSAHVFVEADIV 58
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
ADL + +L + + H AAQ V S + N+ GT L EA + TG V++
Sbjct: 59 TADL-HAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTG-VRKI 116
Query: 134 IHVSTD-EVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
+H S+ +YG T E PE + P +PY+A K E+ + + YGL
Sbjct: 117 VHTSSGGSIYG-TPPEYP--TPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAP 173
Query: 193 NNVYGPNQFPEK---LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV 249
NVYGP Q P ++ F + G+ + G+G+N R Y++ DV +AF V + V
Sbjct: 174 ANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAF-VRVSADV 232
Query: 250 IGHV-YNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LG 307
G + +N+GT KE S + + + + H R + R LD +R LG
Sbjct: 233 GGGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFH--PPRLGDLKRSCLDIGLAERVLG 290
Query: 308 WKEKTPWEEGLKLTLEWYK 326
W+ + +G++ T+E+++
Sbjct: 291 WRPQIELADGVRRTVEYFR 309
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 304 (112.1 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 95/324 (29%), Positives = 141/324 (43%)
Query: 11 KPKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
K KKIL+TGA GFIGSH+T L+ + Y V + + L +L P +
Sbjct: 4 KGKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLK-SLDVFA 62
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI D +G D ++H AA + S+ + + + N+ GT +++A + G
Sbjct: 63 GDIR--DPHGVREAMKGCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELG- 119
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
V + +H ST EVYG + E L +PYSA+K GA+ + M+++ S+ P
Sbjct: 120 VAKVVHTSTSEVYGTARF---VPITEEHPLQGQSPYSASKIGADQIAMSFYSSFDTPVAI 176
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH-RG 248
R N YGP Q IP I G + G R Y AD F +
Sbjct: 177 IRPFNTYGPRQSARAFIPTVITQIASGARTLRLGALHPTRDLNYVADTVAGFIAVAESEK 236
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH--RYFLDDQKLKRL 306
+G V N+G+ E S+ + A I + + E + RP R + D K KRL
Sbjct: 237 SVGEVINIGSNFEISMGETARMIADVMGADVEIVTDAERLRPDKSEVERLWADTSKAKRL 296
Query: 307 -----GWKEKTPWEEGLKLTLEWY 325
+ K GL T+EW+
Sbjct: 297 LDHGQNYGGKDGLRRGLVETVEWF 320
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 303 (111.7 bits), Expect = 4.7e-26, P = 4.7e-26
Identities = 100/327 (30%), Positives = 159/327 (48%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
KK LITG AGFIGSH+ L+ Y + +D Y KN + + + I
Sbjct: 3 KKCLITGGAGFIGSHLAEELVGR--GYNVTIVDNF-YKG--KNKYHDELMKEIRVIP--I 55
Query: 73 TCADLMN-YLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ D + Y LV++ D + H AA V + S E N GT +L+A L G+ K
Sbjct: 56 SVLDKNSIYELVNQH-DVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAA-LKGK-K 112
Query: 132 RFIHVSTDEVYGETDME-SDIGNP--EASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
+ + ST EVYG+ S+ G+ A+ + + Y+ K E L + Y GLP
Sbjct: 113 KVVFASTSEVYGKAKPPFSEEGDRLYGATSKIRWS-YAICKTLEETLCLGYALE-GLPVT 170
Query: 189 TTRGNNVYGPN--QFPEK-LIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL 245
R N+YGP P +IP+FI A++G+ + ++G+G R + Y +D EA +
Sbjct: 171 IVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAM 230
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKT-IHYVQDRP--FNDHRYFLDD-Q 301
V G + N+G++ E+S+ +VA I L + + + + P F + D
Sbjct: 231 DEKVNGEIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVT 290
Query: 302 KLKRL-GWKEKTPWEEGLKLTLEWYKK 327
KLK L ++ K WE+GLK T++W+++
Sbjct: 291 KLKDLVQFQAKVTWEDGLKETIKWFRE 317
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 303 (111.7 bits), Expect = 4.7e-26, P = 4.7e-26
Identities = 95/320 (29%), Positives = 151/320 (47%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+IL+TG AGFIGSH+ ++L++N + E++ D + S NL P F+ ++ D+T
Sbjct: 32 RILVTGGAGFIGSHLVDKLMQNEKN-EVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 89
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
L V +D I H A N + N+ GT +L K G R
Sbjct: 90 -----EPLFVE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RI 140
Query: 134 IHVSTDEVYGET----DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
+ ST EVYG+ ES GN + + + Y K AE L+ YHR +G+
Sbjct: 141 LLTSTSEVYGDPLVHPQTESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 198
Query: 190 TRGNNVYGP--NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
R N YGP N +++ FI A++G+ L + G+ RS+ Y +D+ E ++
Sbjct: 199 ARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEG 258
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-L 306
G + N+G E +++++A + L K P+ I V++ P + + D K K L
Sbjct: 259 DQTGPI-NIGNPGEFTMVELAETVKELIK--PDVEIKMVENTPDDPRQRKPDISKAKEVL 315
Query: 307 GWKEKTPWEEGLKLTLEWYK 326
GW+ K EGL L E ++
Sbjct: 316 GWEPKVKLREGLPLMEEDFR 335
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 88/320 (27%), Positives = 154/320 (48%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 146 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 133 FIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 191 RGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLG 307
V V N+G +E ++L+ A I L E I ++ + + + D +K K LG
Sbjct: 317 VSSPV-NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WKEKTPWEEGLKLTLEWYKK 327
W+ P EEGL + +++K
Sbjct: 374 WEPVVPLEEGLNKAIHYFRK 393
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 88/320 (27%), Positives = 154/320 (48%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 146 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 133 FIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 191 RGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLG 307
V V N+G +E ++L+ A I L E I ++ + + + D +K K LG
Sbjct: 317 VSSPV-NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WKEKTPWEEGLKLTLEWYKK 327
W+ P EEGL + +++K
Sbjct: 374 WEPVVPLEEGLNKAIHYFRK 393
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 88/320 (27%), Positives = 154/320 (48%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 146 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 133 FIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 191 RGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLG 307
V V N+G +E ++L+ A I L E I ++ + + + D +K K LG
Sbjct: 317 VSSPV-NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WKEKTPWEEGLKLTLEWYKK 327
W+ P EEGL + +++K
Sbjct: 374 WEPVVPLEEGLNKAIHYFRK 393
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 307 (113.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 88/320 (27%), Positives = 154/320 (48%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 146 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 133 FIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 191 RGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLG 307
V V N+G +E ++L+ A I L E I ++ + + + D +K K LG
Sbjct: 317 VSSPV-NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WKEKTPWEEGLKLTLEWYKK 327
W+ P EEGL + +++K
Sbjct: 374 WEPVVPLEEGLNKAIHYFRK 393
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 305 (112.4 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 86/320 (26%), Positives = 152/320 (47%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+IL+TG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 89 KRILVTGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 145
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 146 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 196
Query: 133 FIHVSTDEVYGETDMESDIGN--PEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ ST EVYG+ ++ + + + P Y K AE + AY + G+
Sbjct: 197 LLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 191 RGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLK-RLG 307
V V N+G +E ++L+ A I L E I ++ + + + D +K K LG
Sbjct: 317 VSSPV-NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WKEKTPWEEGLKLTLEWYKK 327
W+ P EEGL + +++K
Sbjct: 374 WEPVVPLEEGLNKAIHYFRK 393
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 296 (109.3 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 94/320 (29%), Positives = 152/320 (47%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ILI+G AGFIGSH+ ++L++N + E+V D + S +NL P F+ ++ D+T
Sbjct: 46 RILISGGAGFIGSHLVDKLMENEKN-EVVVADNY-FTGSKENLKKWIGHPRFELIRHDVT 103
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
LL+ +D I H A N + N+ GT +L K G R
Sbjct: 104 -----EPLLIE--VDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RI 154
Query: 134 IHVSTDEVYGET----DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
+ ST EVYG+ ES GN + + + Y K AE L+ YHR +G+
Sbjct: 155 LLTSTSEVYGDPLIHPQPESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 212
Query: 190 TRGNNVYGP--NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
R N YGP N +++ FI A++G+ L + G+ RS+ Y +D+ + ++
Sbjct: 213 ARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEG 272
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-L 306
G + N+G E +++++A + L + P I V++ P + + D K K L
Sbjct: 273 NDTGPI-NIGNPGEFTMVELAETVKEL--INPSIEIKMVENTPDDPRQRKPDISKAKEVL 329
Query: 307 GWKEKTPWEEGLKLTLEWYK 326
GW+ K EGL L E ++
Sbjct: 330 GWEPKVKLREGLPLMEEDFR 349
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 301 (111.0 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 87/320 (27%), Positives = 153/320 (47%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 83 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 139
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 140 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 190
Query: 133 FIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 191 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 250
Query: 191 RGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG 248
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 251 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 310
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-LG 307
V V N+G +E ++L+ A I L E I ++ + + + D +K K L
Sbjct: 311 VSSPV-NLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIRKAKMMLA 367
Query: 308 WKEKTPWEEGLKLTLEWYKK 327
W+ P EEGL + +++K
Sbjct: 368 WEPVVPLEEGLNKAIHYFRK 387
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 291 (107.5 bits), Expect = 9.3e-25, P = 9.3e-25
Identities = 93/320 (29%), Positives = 151/320 (47%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ILI+G AGFIGSH+ ++L++N + E++ D + S NL P F+ ++ D+T
Sbjct: 30 RILISGGAGFIGSHLVDKLMENEKN-EVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 87
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
LL+ +D I H A N + N+ GT +L K G R
Sbjct: 88 -----EPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RI 138
Query: 134 IHVSTDEVYGET----DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
+ ST EVYG+ ES GN + + + Y K AE L+ YHR +G+
Sbjct: 139 LLTSTSEVYGDPLIHPQPESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 196
Query: 190 TRGNNVYGP--NQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
R N YGP N +++ FI A++G+ L + G+ RS+ Y +D+ + ++
Sbjct: 197 ARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEG 256
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR-L 306
G + N+G E +++++A + L + P I V++ P + + D K K L
Sbjct: 257 DDTGPI-NIGNPGEFTMVELAETVKEL--INPSIEIKMVENTPDDPRQRKPDITKAKEVL 313
Query: 307 GWKEKTPWEEGLKLTLEWYK 326
GW+ K EGL L E ++
Sbjct: 314 GWEPKVKLREGLPLMEEDFR 333
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 298 (110.0 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 87/322 (27%), Positives = 154/322 (47%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 87 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 143
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 144 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 194
Query: 133 FIHVSTDEVYGETDMESDIGNPEA-SQLLPTNP---YSATKAGAEMLVMAYHRSYGLPTI 188
+ ST EVYG+ ++ N + + P P Y K AE + AY + G+
Sbjct: 195 LLLASTSEVYGDPEVHPQ--NEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 252
Query: 189 TTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
R N +G +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 253 VARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMN 312
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
+ V N+G +E ++L+ A I +L + I ++ + + R D +K K L
Sbjct: 313 SNISSPV-NLGNPEEHTILEFAQLIKSL--VASRSHIQFLPEAQDDPQRRRPDIRKAKLL 369
Query: 307 -GWKEKTPWEEGLKLTLEWYKK 327
GW+ P EEGL T++++ +
Sbjct: 370 LGWEPVVPLEEGLNKTIQYFSR 391
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 297 (109.6 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 88/322 (27%), Positives = 152/322 (47%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 90 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 146
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 147 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 197
Query: 133 FIHVSTDEVYGETDMESDIGNPEA-SQLLPTNP---YSATKAGAEMLVMAYHRSYGLPTI 188
+ ST EVYG+ ++ N + + P P Y K AE + AY + G+
Sbjct: 198 LLLASTSEVYGDPEVHPQ--NEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 255
Query: 189 TTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
R N +GP +++ FIL A++G+ L ++G G+ R++ Y +D+ +++
Sbjct: 256 VARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMN 315
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
V V N+G +E ++L+ A I L E I ++ + + + D +K K L
Sbjct: 316 SNVSSPV-NLGNPEEHTILEFAQLIKKLVGSGSE--IQFLSEAQDDPQKRKPDIRKAKLL 372
Query: 307 -GWKEKTPWEEGLKLTLEWYKK 327
GW+ P EEGL + +++K
Sbjct: 373 LGWEPVVPLEEGLNKAIHYFRK 394
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 281 (104.0 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 91/322 (28%), Positives = 157/322 (48%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+IL+TG AGFIGSH+ RL++ ++++ LD + S +N+ F+ ++ DI
Sbjct: 2 RILVTGGAGFIGSHLCERLLEQ--GHDVLCLDNF-FTGSKRNIDRLMDFHRFEVIRHDI- 57
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK-R 132
+ +L+ +D I + A + N + ++ GT +L K +V+ R
Sbjct: 58 ----IEPILLE--VDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAK---RVRAR 108
Query: 133 FIHVSTDEVYGETDM----ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
+ ST EVYG+ + ES GN + + Y K AE L+M YHR G+
Sbjct: 109 ILQASTSEVYGDPTIHPQPESYWGNVNPIGI--RSCYDEGKRVAETLLMDYHRQNGVDIR 166
Query: 189 TTRGNNVYGPN--QFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL- 245
R N YGP + +++ F++ A++G+ L ++G+GS RS+ Y D+ + ++
Sbjct: 167 IARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLME 226
Query: 246 HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR 305
H G V N+G +E +++ A I + + I Y + P +D R D L R
Sbjct: 227 HDQFCGPV-NLGNPEETPIIEFARRIIAMTGSSSQ--IIY-RPLPSDDPRQRQPDITLAR 282
Query: 306 --LGWKEKTPWEEGLKLTLEWY 325
LGW+ + +EGL T+E++
Sbjct: 283 TILGWEPRVSLDEGLAKTIEYF 304
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 85/315 (26%), Positives = 153/315 (48%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
++L+TG GFIGSH+ + L+ +++ +D L SL+NL + + + G++T
Sbjct: 3 EVLVTGGCGFIGSHLVDALLSQ--GFKVRVMDNLSN-GSLENLKCGQRD-KLEIINGNLT 58
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
L++ + +G +T+ H AA +V NS ++ NN TH LLEA + +V R
Sbjct: 59 DKFLLDSAV--KGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMR-RNRVDRL 115
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
+ S+ VYGE+ + + + + LLP + Y A+K E L+ AY YGL R
Sbjct: 116 VFASSAAVYGESGLT--VLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFA 173
Query: 194 NVYGPNQFPEKLIPKFIL-LAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV--I 250
N+ G + +I F+ L L + G+GS + YL+ +D + + +
Sbjct: 174 NIVGSRRH-SGVIYDFVSRLRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKNL 232
Query: 251 GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH--RYFLDDQKLKRLGW 308
G +YN+GT +V D+A + + L+ + +R + + D +++ LG+
Sbjct: 233 G-LYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVRFDISRIRTLGF 291
Query: 309 KEKTPWEEGLKLTLE 323
K K + +KL ++
Sbjct: 292 KPKFTSLQAVKLAIK 306
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 269 (99.8 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 95/337 (28%), Positives = 152/337 (45%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-----DYCSSLKNLHPSRASPNFK 66
PK LITG AGFIGS++ +L+K + ++ LD +++L S F
Sbjct: 15 PKTWLITGVAGFIGSNLLEQLLKL--NQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFS 72
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F+ GDI D V G+D ++H AA V S + NI G +L+A K
Sbjct: 73 FINGDIR--DYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAK- 129
Query: 127 TGQVKRFIHVSTDEVYGE----TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS 182
+VK F + ++ YG+ +E +IGNP +PY+ TK E+ Y R+
Sbjct: 130 EAEVKSFTYAASSSTYGDHPALPKVEQNIGNP-------LSPYAVTKYVNELYASVYART 182
Query: 183 YGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
YG TI R NV+G Q P +IPK+ +KG+ + I+G+G R + Y +V
Sbjct: 183 YGFETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVV 242
Query: 239 EAFDVILHRGVI---GHVYNVGTKKERSVLDV---AADICTLFKLEPEKTIHYVQDRPFN 292
+ +++ VYNV ++ D+ D + + +Y +D
Sbjct: 243 Q-MNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNY-RDFRAG 300
Query: 293 DHRYFLDD--QKLKRLGWKEKTPWEEGLKLTLEWYKK 327
D R+ D + + RLG++ EG+ + WYK+
Sbjct: 301 DVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKE 337
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 269 (99.8 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 95/337 (28%), Positives = 152/337 (45%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-----DYCSSLKNLHPSRASPNFK 66
PK LITG AGFIGS++ +L+K + ++ LD +++L S F
Sbjct: 15 PKTWLITGVAGFIGSNLLEQLLKL--NQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFS 72
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F+ GDI D V G+D ++H AA V S + NI G +L+A K
Sbjct: 73 FINGDIR--DYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAK- 129
Query: 127 TGQVKRFIHVSTDEVYGE----TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS 182
+VK F + ++ YG+ +E +IGNP +PY+ TK E+ Y R+
Sbjct: 130 EAEVKSFTYAASSSTYGDHPALPKVEQNIGNP-------LSPYAVTKYVNELYASVYART 182
Query: 183 YGLPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVA 238
YG TI R NV+G Q P +IPK+ +KG+ + I+G+G R + Y +V
Sbjct: 183 YGFETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVV 242
Query: 239 EAFDVILHRGVI---GHVYNVGTKKERSVLDV---AADICTLFKLEPEKTIHYVQDRPFN 292
+ +++ VYNV ++ D+ D + + +Y +D
Sbjct: 243 Q-MNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNY-RDFRAG 300
Query: 293 DHRYFLDD--QKLKRLGWKEKTPWEEGLKLTLEWYKK 327
D R+ D + + RLG++ EG+ + WYK+
Sbjct: 301 DVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKE 337
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 263 (97.6 bits), Expect = 9.8e-22, P = 9.8e-22
Identities = 94/325 (28%), Positives = 159/325 (48%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+ LITG AGF+G ++ N L + + E+ + +S N PN + + DI
Sbjct: 2 RALITGVAGFVGKYLANHLTEQ--NVEV-------FGTSRNN---EAKLPNVEMISLDIM 49
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+ + ++ D I H AA++ V +S+ N + N++GT +L+A + + R
Sbjct: 50 DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRI 109
Query: 134 IHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
+ + + E YG ES + E +QL P +PY +KA ML Y ++YG+ I TR
Sbjct: 110 LTIGSSEEYGMILPEESPVS--EENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRT 167
Query: 193 NNVYGPNQ---FPEKLIPKFIL-LAMKGQQLPIH-GNGSNVRSYLYCADVAEAFDVILHR 247
N GP Q F + K I+ + M+ Q+ I GN VR + D+ +A+ ++
Sbjct: 168 FNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQY 227
Query: 248 GVIGHVYNV----GTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL 303
G G VYNV GT+ + VLD+ + + K++ E ++ +Q RP +++L
Sbjct: 228 GKTGDVYNVCSGIGTRIQ-DVLDLLLAMANV-KIDTE--LNPLQLRPSEVPTLIGSNKRL 283
Query: 304 K-RLGWKEKTPWEEGLKLTLEWYKK 327
K GWK + P E+ L L+ Y++
Sbjct: 284 KDSTGWKPRIPLEKSLFEILQSYRQ 308
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 262 (97.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 88/333 (26%), Positives = 154/333 (46%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL-DYCS-SLKN--LHPSRASPNFKFLK 69
+ L+TG AGFIG H+T RL+ D+ I+ LD L DY +LK L + P+F F K
Sbjct: 7 RTLVTGCAGFIGFHLTKRLLAR-GDH-ILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 64
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
D+ M L DT++H AAQ V S N + + ++N+ G +LE C+
Sbjct: 65 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQS- 123
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
VK + S+ VYG + + P Y+A+K E++ +Y + LP
Sbjct: 124 VKHLVFASSSSVYGANEKYPFSESDNVDH--PIALYAASKKANELMAHSYAHLFQLPCTG 181
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL-HRG 248
R VYGP P+ + KF + + + ++ +G R + Y D+ + + L H
Sbjct: 182 LRFFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILLTLDHPP 241
Query: 249 VIGHVYNVGTK---KERS---VLDVAAD---ICTLFKLEPEKTIH------YVQDRPFND 293
Y+ K + + ++ ++ + T F EKT++ ++ +P +
Sbjct: 242 EPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKAIKNFLPLQPGDV 301
Query: 294 HRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWY 325
+ D +L++ ++ +TP ++G+K +EWY
Sbjct: 302 PETYADVSQLEKDFQYRPRTPLQKGVKNFVEWY 334
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 278 (102.9 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 87/331 (26%), Positives = 158/331 (47%)
Query: 7 PASYKPK--KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPN 64
P K K ++++TG AGF+GSH+ +RL+ D ++ +D + +N+ ++PN
Sbjct: 111 PLGLKRKGLRVVVTGGAGFVGSHLVDRLMAR-GD-TVIVVDNF-FTGRKENVMHHFSNPN 167
Query: 65 FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTH-VDNSFGNSFEFTNNNIYGTHVLLEA 123
F+ ++ D+ L+ +D I H A V F N + N+ GT +L
Sbjct: 168 FEMIRHDVVEPILLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGL 219
Query: 124 CKLTGQVKRFIHVSTDEVYGET----DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAY 179
K G RF+ ST EVYG+ +E+ GN + + + Y K AE L M Y
Sbjct: 220 AKRVGA--RFLLTSTSEVYGDPLQHPQVETYWGN--VNPIGVRSCYDEGKRTAETLTMDY 275
Query: 180 HRSYGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237
HR + R N YGP + +++ F+ A++ + L ++G+G RS+ + +D+
Sbjct: 276 HRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 335
Query: 238 AEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYF 297
E ++ +G +N+G E ++L++A + ++P I + + + H+
Sbjct: 336 VEGLMRLMEGEHVGP-FNLGNPGEFTMLELAKVVQET--IDPNANIEFRPNTEDDPHKRK 392
Query: 298 LDDQKLKRL-GWKEKTPWEEGLKLTLEWYKK 327
D K K L GW+ K +GL L ++ +++
Sbjct: 393 PDITKAKELLGWEPKVSLRQGLPLMVKDFRQ 423
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 259 (96.2 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 94/334 (28%), Positives = 155/334 (46%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL--DYCSSLKNLHPSRASP---NFK 66
PK LITG AGFIGS++ L+ + ++V LD + + + ++ NF
Sbjct: 15 PKTWLITGCAGFIGSNLLETLL--LLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFY 72
Query: 67 FLKGDIT-CADLMNYLL-VSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
F+KGDI D L G+D I+H AA V S + + NI G +L A
Sbjct: 73 FVKGDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAA 132
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
K T QVK F++ ++ YG+ + E + P +PY+ TK E+ +H++YG
Sbjct: 133 KET-QVKSFVYAASSSTYGD---HPALPKVEDAIGKPLSPYAVTKYVNELYADVFHKTYG 188
Query: 185 LPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
L R NV+G Q P+ +IPK+ + + ++L I+G+G R + + + +A
Sbjct: 189 LNCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQA 248
Query: 241 FDVILHRGVIG--HVYNV--GTKKERSVLDVAADICTLFK-LEPEKTIHYVQDRPFNDHR 295
+ G VYNV G + + L + + ++ +K+ Y QD D R
Sbjct: 249 NILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTY-QDFRAGDVR 307
Query: 296 YFLDD-QKLKRL-GWKEKTPWEEGLKLTLEWYKK 327
+ D K K L G++ + ++G+ + WY K
Sbjct: 308 HSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIK 341
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 259 (96.2 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 94/334 (28%), Positives = 155/334 (46%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL--DYCSSLKNLHPSRASP---NFK 66
PK LITG AGFIGS++ L+ + ++V LD + + + ++ NF
Sbjct: 15 PKTWLITGCAGFIGSNLLETLL--LLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFY 72
Query: 67 FLKGDIT-CADLMNYLL-VSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
F+KGDI D L G+D I+H AA V S + + NI G +L A
Sbjct: 73 FVKGDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAA 132
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
K T QVK F++ ++ YG+ + E + P +PY+ TK E+ +H++YG
Sbjct: 133 KET-QVKSFVYAASSSTYGD---HPALPKVEDAIGKPLSPYAVTKYVNELYADVFHKTYG 188
Query: 185 LPTITTRGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
L R NV+G Q P+ +IPK+ + + ++L I+G+G R + + + +A
Sbjct: 189 LNCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQA 248
Query: 241 FDVILHRGVIG--HVYNV--GTKKERSVLDVAADICTLFK-LEPEKTIHYVQDRPFNDHR 295
+ G VYNV G + + L + + ++ +K+ Y QD D R
Sbjct: 249 NILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTY-QDFRAGDVR 307
Query: 296 YFLDD-QKLKRL-GWKEKTPWEEGLKLTLEWYKK 327
+ D K K L G++ + ++G+ + WY K
Sbjct: 308 HSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIK 341
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 249 (92.7 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 98/340 (28%), Positives = 151/340 (44%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
ILI G AG+IGSH +L+ +V +D +L+ H + KF GD+
Sbjct: 4 ILICGGAGYIGSHAVKKLVDE--GLSVVVVD------NLQTGHEDAITEGAKFYNGDLRD 55
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
+ + E I+ +MHFAA + V S ++ NNN+YG LLE +V +FI
Sbjct: 56 KAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMD-EFKVDKFI 114
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
ST YGE D+ D+ E + PTN Y TK E ++ Y ++ L R N
Sbjct: 115 FSSTAATYGEVDV--DLITEE-TMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFN 171
Query: 195 VYG--PNQF------PEK-LIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCAD-V 237
V G PN PE LIP + +A+ + +++ + G+ G+ +R Y++ D V
Sbjct: 172 VAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLV 231
Query: 238 AEAFDVI--LHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHR 295
A F + L G YN+G SV ++ + + E + R + R
Sbjct: 232 AAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEV--APRRAGDPAR 289
Query: 296 YFLDDQKLK-RLGWKEKTPWEEGLKLTLE----WYKKNPH 330
QK K +LGW P +K +E W++K P+
Sbjct: 290 LVASSQKAKEKLGWD---PRYVNVKTIIEHAWNWHQKQPN 326
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 248 (92.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 86/334 (25%), Positives = 153/334 (45%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSR--ASPNFKFLK 69
KIL+TGAAGFIGS + RL+K + + +D Y LK +R A +F+ +
Sbjct: 2 KILVTGAAGFIGSEMALRLLKE--GHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLER 59
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
I ++ M + + + ++HFAAQ V S + +F + NI G+ +++ + G
Sbjct: 60 IRIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHG- 118
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
+ + ST YG + + +++ P Y+ATK +E++ ++ YG+PT
Sbjct: 119 TQHLVMASTSSAYG-ANQKFPFEERDSAPY-PLTIYAATKLASELIAHSHAHLYGVPTTV 176
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG- 248
R +VYGP P+ F KGQ + + +G +R + Y D+ EA ++
Sbjct: 177 LRFFSVYGPWGRPDMAFFLFTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMDTPP 236
Query: 249 VIG-HV-----------Y---NVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFND 293
V+G H+ Y N+G ++D I + EK + + +P +
Sbjct: 237 VVGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNM--IDMQPGDV 294
Query: 294 HRYFLDDQKLKRL-GWKEKTPWEEGLKLTLEWYK 326
+ F D + L L G+ T + G+ ++WY+
Sbjct: 295 KQTFADVRLLDALTGYTPDTDYRTGIARFVDWYR 328
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 191 (72.3 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 73/255 (28%), Positives = 112/255 (43%)
Query: 12 PKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKL--DYCSSLKNLHP-SRASP----N 64
P +L+TG AG+IGSH ++ Y ++ +D L Y S K SR
Sbjct: 3 PPTVLVTGGAGYIGSHTVLEMLN--AGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKK 60
Query: 65 FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
F + DIT + + + ID + HFAA V S ++ +NN+ GT+VLLEA
Sbjct: 61 VNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAM 120
Query: 125 KLTGQVKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS- 182
V +F++ S+ VYGE + +P + T+PY TK E ++ +S
Sbjct: 121 A-DNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNC---TSPYGKTKYFTEEILKDLCKSD 176
Query: 183 -----YGLPTITTRGNNVYG-----PNQFPEKLIPKFILLAMK--------GQQLPIHGN 224
L G ++ G PN P L+P +A+ G P H +
Sbjct: 177 KRWAVVSLRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTH-D 235
Query: 225 GSNVRSYLYCADVAE 239
G+ VR Y++ D+AE
Sbjct: 236 GTGVRDYIHIVDLAE 250
Score = 118 (46.6 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 212 LAMKGQQLPIHGNGSNVRSYLYCADVAE----AFDVILHRGVIGH-VYNVGTKKERSVLD 266
L++ G P H +G+ VR Y++ D+AE A D + + G YN+GT SVLD
Sbjct: 224 LSVYGSDFPTH-DGTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLD 282
Query: 267 VAADICTLFKLEPEKTIHY-VQDRPFNDHRYFLDDQKL--KRLGWKEKTPWEEGLKLTLE 323
+ F+ K ++Y + DR D D L K+LGWK + ++ + T
Sbjct: 283 MVK----AFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWKAERGIDKMCEDTWR 338
Query: 324 WYKKNPHWWGD 334
W +NP+ + +
Sbjct: 339 WQSQNPNGYAN 349
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 249 (92.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 88/330 (26%), Positives = 143/330 (43%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
KP I +TG AGFIGSH+ + L+ +++ +D L +NL +P+ F
Sbjct: 3 KPIAI-VTGGAGFIGSHMVDLLLDC--GFQVRVIDNLKG-GHRRNLEHRANNPDLTFEIK 58
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
DI C +L + E +D + HFA + S N ++ N+ GT +LE C V
Sbjct: 59 DI-C-ELSAPHPLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLE-CARAANV 115
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
K+ ++ ++ YG D+ + +P A P PY+ +K E + + YGLP +
Sbjct: 116 KKLVYAASSSCYGLADVPTREDHPIA----PQYPYALSKYLGEEAAFHWFQVYGLPVNSI 171
Query: 191 RGNNVYGPNQFPE----KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH 246
R N YG + F + + + G+G+ R +LY DVA AF
Sbjct: 172 RIFNAYGTRVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAE 231
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR- 305
+G +N+G +S+ + L E E Y+ RP + D K+KR
Sbjct: 232 TRKVGETWNLGAGNPQSI----NRLVELIGGEVE----YIPKRPGEPDCTWADISKIKRD 283
Query: 306 LGWKEKTPWEEGLKLTLE----WYKKNPHW 331
LGW+ + +G+ + W+ P W
Sbjct: 284 LGWEPTITFADGVSRMMSEIGVWHDA-PLW 312
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 239 (89.2 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 83/306 (27%), Positives = 136/306 (44%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
K+ ITGA G +GSH+ L+ +++ A YC + PS F + DIT
Sbjct: 2 KVWITGAGGMMGSHLAEMLLA--AGHDVYAT----YCRP--TIDPSDLQ--FNGAEVDIT 51
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+ + + D + H AAQ++ S+ E N+ GT ++ EA + +
Sbjct: 52 DWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKI 111
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
I + YG D S++ E +L P +PY +KA +ML YH+SYG+ T+ R
Sbjct: 112 IVAGSSAEYGFVD-PSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIF 170
Query: 194 NVYGPNQFPEKL---IPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEAFDVILHRGV 249
N GP + + L + + L +Q I GN R+ + D+ A ++L +G
Sbjct: 171 NCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGE 230
Query: 250 IGHVYNVGTKKERSVLDVAADI---CTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL 306
G YNVG + DV + C + PE + RP ++ + D KL +
Sbjct: 231 AGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPE--VDPALLRPTDEKIIYGDCSKLAAI 288
Query: 307 -GWKEK 311
GW+++
Sbjct: 289 TGWQQE 294
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 206 (77.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 58/192 (30%), Positives = 93/192 (48%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDY--CSSLKNLHPSRASPN-FKFLKGD 71
+L+TG AG+IGSH RL+K Y + +D L ++++ L P +F+ D
Sbjct: 73 VLVTGGAGYIGSHAALRLLKE--SYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYAD 130
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ A +N + D +MHFAA +V S ++ +N T V+LE G VK
Sbjct: 131 LGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG-VK 189
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
I+ ST YGE D+ + E + +P NPY K AE +++ + ++ + + R
Sbjct: 190 TLIYSSTCATYGEPDI---MPITEETPQVPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
Query: 192 GNNVYGPNQFPE 203
NV G + PE
Sbjct: 247 YFNVIGSD--PE 256
Score = 93 (37.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 212 LAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV---IGHVYNVGTKKERSVLDVA 268
L +KG +G+ VR Y+ D+ +A L + +G +YNVGT K SV +
Sbjct: 288 LQIKGTDYKT-ADGTCVRDYIDVTDLVDAHVKALQKAKPRKVG-IYNVGTGKGSSVKEFV 345
Query: 269 ADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL-KRLGWKEK-TPWEEGLKLTLEWYK 326
+ C E I Y+ R + + D K+ K L W K T +E L+ W K
Sbjct: 346 -EACKK-ATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQK 403
Query: 327 KNPHWWGDVTGAL 339
+ + +G T ++
Sbjct: 404 LHRNGYGLTTSSV 416
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 252 (93.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 81/321 (25%), Positives = 154/321 (47%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+ ++L+ + +E++ALD + KN+ PNF+ + D+
Sbjct: 137 KRILITGGAGFVGSHLVDKLMLD--GHEVIALDNY-FTGRKKNVEHWIGHPNFEMVHHDV 193
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+N V +D I H A+ + N + N GT +L K +VK
Sbjct: 194 -----VNPYFVE--VDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAK---RVKA 243
Query: 133 FIHV-STDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
+ + ST EVYG+ ++ + + + + P Y K AE L++AY++ +
Sbjct: 244 TVLLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRI 303
Query: 190 TRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
R N +GP +++ FI+ A++ + + I+GNG+ RS+ Y D+ + +++
Sbjct: 304 ARIFNTFGPRMHMNDGRVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNS 363
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV--QDRPFNDHRYFLDDQKLKR 305
V N+G +E ++ A I L + ++ QD P R + + ++
Sbjct: 364 NYSLPV-NIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDP-QQRRPDIR-RAAEQ 420
Query: 306 LGWKEKTPWEEGLKLTLEWYK 326
+ W + ++GL T+++++
Sbjct: 421 ISWAPQVHMKDGLLKTVDYFR 441
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 248 (92.4 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 94/334 (28%), Positives = 143/334 (42%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSRASPNFKFL-KGD 71
+L+TGAAGF+G+HV+ L K D ++ LD + Y SLK + + F+ +GD
Sbjct: 93 VLVTGAAGFVGTHVSAAL-KRRGD-GVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGD 150
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
I A L+ L +MH AAQ V + N + ++NI G LLE CK
Sbjct: 151 INDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQP 210
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQL-LPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ S+ VYG + + + E + P + Y+ATK E + Y+ YGL
Sbjct: 211 AIVWASSSSVYG---LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGL 267
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIH---GNGSNVRSYLYCADVAE----AFDV 243
R VYGP P+ F +KG+ + I +G+ R + Y D+ + A D
Sbjct: 268 RFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDT 327
Query: 244 I--------LHRGVIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH 294
RG V+N+G V D+ + L K++ ++ I + P N
Sbjct: 328 AEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKL---PRNGD 384
Query: 295 RYFLD---DQKLKRLGWKEKTPWEEGLKLTLEWY 325
F + LG+K T + GLK WY
Sbjct: 385 VQFTHANISSAQRELGYKPTTDLQTGLKKFARWY 418
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 248 (92.4 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 88/329 (26%), Positives = 149/329 (45%)
Query: 9 SYKPKK-ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKF 67
+YK +K ILITG AGF+GSH+ + L+ +E++ +D + +N+ NF+
Sbjct: 111 NYKNRKRILITGGAGFVGSHLVDDLMVQ--GHEVIVVDNF-FTGRKRNVEHWLGHENFEL 167
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+ DI +N L + ID I H A+ + N + N GT +L K
Sbjct: 168 IHHDI-----VNPLFIE--IDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRV 220
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEA--SQLLPTNP---YSATKAGAEMLVMAYHRS 182
+ + + ST EVYG+ + PE + P P Y K +E L AY +
Sbjct: 221 --MAKVLIASTSEVYGDPTVHPQ---PETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQ 275
Query: 183 YGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
+ R N YGP +++ FIL A++ + + ++GNG RS+ Y +D+ +
Sbjct: 276 EKVQVRVARIFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDG 335
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPE--KTIHYVQDRPFNDHRYFL 298
++ V N+G E+++ + A I L P K ++D P R
Sbjct: 336 MIALMASNYTQPV-NLGNPVEQTIGEFAEIIKKLVG-GPSVIKQSKAMEDDP---QRRKP 390
Query: 299 DDQKLKRL-GWKEKTPWEEGLKLTLEWYK 326
D + ++L W+ K P E GL+ T+ +++
Sbjct: 391 DITRARQLLHWEPKVPLETGLQRTISYFR 419
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 241 (89.9 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 88/331 (26%), Positives = 142/331 (42%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSRASPNFKFL-KGD 71
+L+TGAAGF+G+HV+ L K D ++ LD + Y +SLK + + F+ +GD
Sbjct: 94 VLVTGAAGFVGTHVSAAL-KRRGD-GVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGD 151
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
I L+ L +MH AAQ V + N + ++NI G LLE CK
Sbjct: 152 INDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQP 211
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQL-LPTNPYSATKAGAEMLVMAYHRSYGLPTITT 190
+ S+ VYG + + + E + P + Y+ATK E + Y+ YGL
Sbjct: 212 AIVWASSSSVYG---LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGL 268
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIH---GNGSNVRSYLYCADVAE----AFDV 243
R VYGP P+ F +KG+ + I +G+ R + Y D+ + A D
Sbjct: 269 RFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCLGALDT 328
Query: 244 I--------LHRGVIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH 294
RG V+N+G V D+ + + L K++ ++ + +
Sbjct: 329 AEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRNGDVPF 388
Query: 295 RYFLDDQKLKRLGWKEKTPWEEGLKLTLEWY 325
+ + G+K T + GLK + WY
Sbjct: 389 THANISSAQREFGYKPSTDLQTGLKKFVRWY 419
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 241 (89.9 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 96/346 (27%), Positives = 148/346 (42%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSRASPNFKFL-KGD 71
+L+TGAAGF+G+HV+ L K D ++ LD + Y SLK + + F+ +GD
Sbjct: 99 VLVTGAAGFVGTHVSAAL-KRRGD-GVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGD 156
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
I +L+ L +MH AAQ V + N + ++NI G LLE CK
Sbjct: 157 INDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQP 216
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
+ S+ VYG + Q P + Y+ATK E + Y+ YGL R
Sbjct: 217 AIVWASSSSVYGLNTKVPFSEKDKTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 274
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIH---GNGSNVRSYLYCADVAE----AFDVI 244
VYGP P+ F +KG+ + I +G+ R + Y D+ + A D
Sbjct: 275 FFTVYGPWGRPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTA 334
Query: 245 --------LHRGVIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFN-DH 294
RG V+N+G V D+ + K++ +K + + P N D
Sbjct: 335 EKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIKM---PRNGDV 391
Query: 295 RYFLDDQKL--KRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTGA 338
+ + L + LG+K T + GLK + WY ++ GD A
Sbjct: 392 PFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLS--YYSGDKKAA 435
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 234 (87.4 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 93/322 (28%), Positives = 147/322 (45%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K LITG G +GS + + L+ N DYE++ + + + + N++ N K + I
Sbjct: 3 KTALITGFTGQVGSQMADFLLAN-TDYEVIGM--MRWQEPMDNIYHLSDRINKKD-RISI 58
Query: 73 TCADLMNY-----LLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
ADL +Y L S+ D I H AAQ++ SF E NI GT +LE ++
Sbjct: 59 FYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRIL 118
Query: 128 GQVKRF---IHV-STDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
+ +HV S+ EVYG + + E + +PYS +K G + L Y +Y
Sbjct: 119 KAKDGYDPVVHVCSSSEVYGRAKVGIKLN--EDTTFHGASPYSISKIGTDYLGRFYGEAY 176
Query: 184 GLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH--GNGSNVRSYLYCADVA 238
+ T TR GP + F E + K I L G Q P+ GN S+VR++ D
Sbjct: 177 NIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARDAI 236
Query: 239 EAFDVIL---HRGVI--GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD----R 289
A+ ++ +G + G +N+ ++ + +V I L K I QD R
Sbjct: 237 RAYYLLSLESQKGKVPCGEAFNIAGEEAFKLPEV---IEILLSFSTRKDIKIEQDEERLR 293
Query: 290 PFN-DHRYFLDDQKLKR-LGWK 309
P + D++ F D+ K+K + WK
Sbjct: 294 PIDADYQMF-DNTKIKSFINWK 314
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 183 (69.5 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 73/258 (28%), Positives = 109/258 (42%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSRASPN---FKF 67
K +L+TG AG+IGSH +L++ Y V +D D S SL+ + A N F
Sbjct: 3 KSVLVTGGAGYIGSHTVLQLLEG--GYSAVVVDNYDNSSAASLQRVK-KLAGENGNRLSF 59
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+ D+ + + D ++HFA V S + NNNI GT LLE
Sbjct: 60 HQVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQY 119
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG-LP 186
G K + S+ VYG ++ E S + TNPY TK E + HRS
Sbjct: 120 G-CKNLVFSSSATVYG---WPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWK 175
Query: 187 TITTRGNNVYG--PNQF--------PEKLIPKFILLAM-KGQQLPIHG------NGSNVR 229
I R N G P+ + P L+P +A+ + L + G +G+ VR
Sbjct: 176 IILLRYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVR 235
Query: 230 SYLYCADVAEAFDVILHR 247
Y++ D+A+ L +
Sbjct: 236 DYIHVMDLADGHIAALRK 253
Score = 97 (39.2 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 224 NGSNVRSYLYCADVAEAFDVILHR----GVIGHVYNVGTKKERSVLDVAADICTLFKLEP 279
+G+ VR Y++ D+A+ L + + VYN+GT SVL++ A F+
Sbjct: 230 DGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVA----AFEKAS 285
Query: 280 EKTIHYVQD--RPFNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNPH 330
K I V RP + + +K +R L WK K EE + W NP+
Sbjct: 286 GKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPY 339
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 233 (87.1 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 92/333 (27%), Positives = 139/333 (41%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSRASPNFKFL-KGD 71
+L+TGA GF+GSHV+ L K +V LD + Y SLK S S F+ +GD
Sbjct: 90 VLVTGATGFVGSHVSLALRKRGDG--VVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGD 147
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ A L+ L +MH AAQ V + N + ++NI G LLE CK
Sbjct: 148 LNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQP 207
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
+ S+ VYG + + Q P + Y+ATK E + Y+ YGL R
Sbjct: 208 AIVWASSSSVYGLNEKVPFSESDRTDQ--PASLYAATKKAGEEITHTYNHIYGLAITGLR 265
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNV---RSYLYCADVAE----AFDVI 244
VYGP P+ F ++G+ + I+ + V R + Y D+ + + D
Sbjct: 266 FFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKGCLGSLDSS 325
Query: 245 --------LHRGVIGH-VYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHR 295
RG + ++N+G +V + DI L+ + ++V+ P N
Sbjct: 326 GKSTGSGGKKRGAAPYRIFNLGNTSPVTV-PILVDILEKH-LKVKAKRNFVE-MPGNGDV 382
Query: 296 YFLD---DQKLKRLGWKEKTPWEEGLKLTLEWY 325
F G+K T E GLK + WY
Sbjct: 383 PFTHANISSARNEFGYKPTTDLETGLKKFVRWY 415
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 225 (84.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 62/162 (38%), Positives = 86/162 (53%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSRASPNFKFLKGD 71
KILI+G AG+IGSH + +K D+EI LD L S ++++L RA FKF + D
Sbjct: 2 KILISGGAGYIGSHTLRQFLKT--DHEICVLDNLSKGSKIAIEDLQKIRA---FKFFEQD 56
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
++ + L E D I+HFAA V S N ++ NN T L+E C TG V
Sbjct: 57 LSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTG-VN 115
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173
+FI ST YGE ++ + + E S L P NPY +K +E
Sbjct: 116 KFIFSSTAATYGEP--QTPVVS-ETSPLAPINPYGRSKLMSE 154
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 176 (67.0 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDY-----CSSLKNLHPSRASPNFKFLK 69
+L+TG AG+IGSH RL+++ Y + +D L +L+ L P +F+
Sbjct: 97 VLVTGGAGYIGSHAALRLLRD--SYRVTIVDNLSRGNLGAVKTLQQLFPQTG--RLQFIY 152
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
D+ + + D +MHFAA +V S ++ +N T +LEA +
Sbjct: 153 ADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMA-RHK 211
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
VK+ I+ ST YGE + + I E + +P NPY K AE +++ + ++ + +
Sbjct: 212 VKKLIYSSTCATYGEPE-KMPI--TEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMI 268
Query: 190 TRGNNVYG 197
R NV G
Sbjct: 269 LRYFNVIG 276
Score = 103 (41.3 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 212 LAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGV---IGHVYNVGTKKERSVLDVA 268
L +KG +G+ +R Y+ D+ +A L + +G +YNVGT K RSV +
Sbjct: 312 LQVKGTDYKT-SDGTCIRDYIDVTDLVDAHVKALEKAQPRKVG-IYNVGTGKGRSVKEFV 369
Query: 269 ADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQK-LKRLGWKEK-TPWEEGLKLTLEWYK 326
+ C E + ++ RP + + D K LK L W + T ++ L++ W K
Sbjct: 370 -EACKK-ATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQK 427
Query: 327 KNPH 330
+PH
Sbjct: 428 IHPH 431
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 222 (83.2 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 97/339 (28%), Positives = 157/339 (46%)
Query: 15 ILITGAAGFIGSHVTNRL-IKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
IL+TG AG+IGSH+ +L +KN +++ +D L K H K + GD
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNE---KVLVVDNLS-----KG-HKKAVDTRAKLIVGDFG 52
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
+L+ + I ++H AAQ+ V S ++ NI T LL+ L VK+
Sbjct: 53 DENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVM-LKANVKKM 111
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
+ ST VYGE + + I E PTN Y +K E + Y + +G ++ R
Sbjct: 112 VFSSTAAVYGEPE-KWPI--TEDFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYF 168
Query: 194 NVYG--PN------QFPEK-LIPK-FILLAMKGQQLPIHG------NGSNVRSYLYCADV 237
N G P+ PE LIP F ++ + ++L + G +G+ +R Y++ D+
Sbjct: 169 NAAGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDL 228
Query: 238 AEAFDVILHR---GVIGHVYNVGTKKERSVLDV--AADICTLFKLEPEKTIHYVQDRPFN 292
AEA + L++ G VYN+G +K SV ++ A+ T K++ + Y Q RP +
Sbjct: 229 AEAHILALNKLNKDESG-VYNLGNQKGFSVKEIIKVAEEVTGVKVK----VRYGQRRPGD 283
Query: 293 DHRYFLDDQKL-KRLGWKEKTPWEEGLKLTL-EWYKKNP 329
+K+ K L + K + + T EW+K NP
Sbjct: 284 PAVLVASSEKIQKELNFTPKFGDIKTIVQTAWEWHKNNP 322
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 223 (83.6 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 94/337 (27%), Positives = 146/337 (43%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR--ASPNFKFLKGDI 72
ILITG AG+IGSH L+ N +Y+I+ +D L SS+++L+ + F+F K ++
Sbjct: 3 ILITGGAGYIGSHTCVELLNN--NYKIIVVDNLSN-SSIESLNRVKEITGKQFEFYKENV 59
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ MN + + I+ ++HFA V S + NNI VL + + VK
Sbjct: 60 LNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQ-KHNVKN 118
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITT-R 191
FI S+ VYG + + E L TNPY TK E ++ ++ +I R
Sbjct: 119 FIFSSSATVYG---IPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLR 175
Query: 192 GNNVYG----------PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYC 234
N +G PN P L+P +A+ K ++L I GN G+ VR Y++
Sbjct: 176 YFNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHV 235
Query: 235 ADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHY--VQDRPFN 292
D+A+ L + + V ++ F+ K I Y + RP +
Sbjct: 236 VDLAKGHVKALEKVLKTKGIEAYNLGTGKGYSVL-EMVKAFEKVSGKKIPYKVIGRRPGD 294
Query: 293 DHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKN 328
F D K KR LGW+ + EE + W N
Sbjct: 295 VAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 227 (85.0 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 94/342 (27%), Positives = 146/342 (42%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSRASPN 64
P S+ +L+TGA+GF+G+HV+ L + D ++ LD + Y LK +
Sbjct: 90 PRSHGGLTVLVTGASGFVGTHVSIAL-RRRGD-GVLGLDNFNRYYDPKLKRARQGLLERS 147
Query: 65 FKFL-KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEA 123
F+ +GDI A L+ L +MH AAQ V + N + N+NI G LLE
Sbjct: 148 GVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEV 207
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQL-LPTNPYSATKAGAEMLVMAYHRS 182
K + S+ VYG + S + E + P + Y+ATK E + Y+
Sbjct: 208 SKSANPQPAIVWASSSSVYG---LNSKVPFSEKDRTDQPASLYAATKKAGEGIAHTYNHI 264
Query: 183 YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN---GSNVRSYLYCADVAE 239
YGL R VYGP P+ F +KG+ + + + GS R + Y D+ +
Sbjct: 265 YGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVK 324
Query: 240 ----AFDVI--------LHRG-VIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYV 286
A D +G + +YN+G V + + L K++ +K I
Sbjct: 325 GCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKI--- 381
Query: 287 QDRPFN-DHRYFLDDQKLKR--LGWKEKTPWEEGLKLTLEWY 325
P N D + + L + LG+K E GLK ++WY
Sbjct: 382 MPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWY 423
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 210 (79.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 81/279 (29%), Positives = 130/279 (46%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
K+L+TG GF+G + RL KN YE+ A + K + KF+ +
Sbjct: 2 KMLVTGGTGFLGQKLAFRL-KNM-GYEVTATGRN------KTIGKVLEQNGIKFVHCPLE 53
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
D L V + D I H A + + +G +F N N+ GT ++E + G +KR
Sbjct: 54 --DRERVLQVCKDKDYIFHSGAHS---SPWGKYEDFYNANVLGTKHIIEGSQKYG-IKRL 107
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPT--NPYSATKAGAEMLV-MAYHRSYGLPTITT 190
IHVST +Y D ++ E ++L T N Y+ TK AE + A+ ++GLP IT
Sbjct: 108 IHVSTPSIYFYYDERQNV--VENAKLPDTFVNHYATTKYMAEQAIDQAF--AHGLPVITI 163
Query: 191 RGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILH--RG 248
R ++GP ++P+ I + KG LP G + + Y +V +A + +H +
Sbjct: 164 RPRALFGPGD--NAILPRLIKVCEKGA-LPRIGTENVLVDITYVENVVDALLLCMHSPKH 220
Query: 249 VIGHVYNVGTKKER-SVLDVAADICTLFKLEPE-KTIHY 285
+G YN+ T ER ++ +V ++ E K I Y
Sbjct: 221 TLGQKYNI-TNDERINLYEVIENVMKRLDKEVRYKKISY 258
Score = 50 (22.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 300 DQKLKRLGWKEKTPWEEGLKLTLEWYK 326
D+ + LG+ K EEG+ ++W+K
Sbjct: 300 DKAKEELGYAPKVSIEEGITKFVDWWK 326
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 219 (82.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 72/256 (28%), Positives = 121/256 (47%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFK-FLKG 70
++L+TG +G+IGSH +L++N ++++ LD L C+S +++ P R F++G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNL--CNSKRSVLPVIERLGGKHPTFVEG 57
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
DI LM +L IDT++HFA V S E+ +NN+ GT L+ A + V
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANV 116
Query: 131 KRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSATKAGAEMLVMAYHRS------- 182
K FI S+ VYG+ + + P + P +PY +K E ++ ++
Sbjct: 117 KNFIFSSSATVYGDQPKIPYVESFPTGT---PQSPYGKSKLMVEQILTDLQKAQPDWSIA 173
Query: 183 ---YGLPT-ITTRGNNVYGPNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSY 231
Y P G+ P P L+P +A+ + L I GN G+ VR Y
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233
Query: 232 LYCADVAEAFDVILHR 247
++ D+A+ V + +
Sbjct: 234 IHVMDLADGHVVAMEK 249
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 218 (81.8 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 80/315 (25%), Positives = 153/315 (48%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
+IL+TG AG++GS + +L++ Y + D L + P + +P ++GDI
Sbjct: 7 RILVTGGAGYVGSALVPQLLEL--GYRVTVYDTLFFGDDFL---P-KENPYLNIVEGDIR 60
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFG-NSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + + D ++ A ++ D SF + T+ N+ +++A K G VKR
Sbjct: 61 DTERLKQCF--KDADAVISLACISN-DASFELDETLSTSINLEAFEPMVKAAKAAG-VKR 116
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
FI+ S+ VYG ++ + D+ E L+P Y+ K E L+ H+S +T R
Sbjct: 117 FIYASSSSVYGVSETK-DV--TEEHPLVPLTLYNKYKGMCEPLLFK-HQSPEFVCVTIRP 172
Query: 193 NNV--YGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVIL---HR 247
+ Y P Q + + A+ ++ + G GS +R L+ D+ + + ++L
Sbjct: 173 ATLCGYAPRQRLDLSVNILTNHAVNNNKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPDE 231
Query: 248 GVIGHVYNVGTKKERSVLDVAADICTLFKLE-PEKTIHYVQDRPFNDHR-YFLDDQKLKR 305
+ G +NVG + +S++++A + + + E PEK + P +D R Y ++ K+KR
Sbjct: 232 KIAGETFNVGYEN-KSIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKR 290
Query: 306 -LGWKEKTPWEEGLK 319
LG++ K E+ ++
Sbjct: 291 CLGFEAKYSIEDAVR 305
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 217 (81.4 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 91/338 (26%), Positives = 149/338 (44%)
Query: 4 EFEPASYKPK---KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR 60
E E Y P KI ITGA GFI SH+ RL K+ Y I + D+ KN H +
Sbjct: 16 ELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIAS----DW---KKNEHMTE 67
Query: 61 ASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSF-GNSFEFTNNNIYGTHV 119
+F D+ + N L V+EG+D + + AA N NN +
Sbjct: 68 DMFCDEFHLVDLRVME--NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN 125
Query: 120 LLEACKLTGQVKRFIHVSTDEVYGE-TDMESDIGNPEASQLLPTNP---YSATKAGAEML 175
++EA ++ G +KRF + S+ +Y E +E+ + + S P P Y K E L
Sbjct: 126 MIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEEL 184
Query: 176 VMAYHRSYGLPTITTRGNNVYGP----NQFPEKLIPKFILLAMKG-QQLPIHGNGSNVRS 230
Y++ +G+ R +N+YGP EK F A + + G+G RS
Sbjct: 185 CKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRS 244
Query: 231 YLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRP 290
+ + + E + L + N+G+ + S+ ++A + + F+ E + IH++ P
Sbjct: 245 FTFIDECVEGV-LRLTKSDFREPVNIGSDEMVSMNEMAEMVLS-FE-EKKLPIHHIPG-P 300
Query: 291 FNDHRYFLDDQKLK-RLGWKEKTPWEEGLKLTLEWYKK 327
D+ +K +LGW +EGL++T W K+
Sbjct: 301 EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKE 338
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 208 (78.3 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 74/248 (29%), Positives = 121/248 (48%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHP--SRASPNFK-FLKG 70
++L+TG +G+IGSH +L+++ +++V LD L C+S +++ P R S F++G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQS--GHDVVILDNL--CNSKRSVLPVIERLSGKQPTFVEG 57
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
DI LM +L I+T++HFA V S E+ +NN+ GT L+ A + V
Sbjct: 58 DIRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMR-AANV 116
Query: 131 KRFIHVSTDEVYGETD----MES-DIGNPEA----SQLLPTNPYS-ATKAGAE--MLVMA 178
K FI S+ VYG+ +ES G P++ S+L+ + KA E + ++
Sbjct: 117 KNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLR 176
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSY 231
Y G G + P P LIP +A+ + L I GN + VR Y
Sbjct: 177 YFNPVGAHPSGDMGED---PQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDY 233
Query: 232 LYCADVAE 239
++ D+A+
Sbjct: 234 IHVMDLAD 241
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 207 (77.9 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 81/272 (29%), Positives = 122/272 (44%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+L+TG AG+IGSHV +L + Y +V D L +H R + GD++
Sbjct: 3 VLVTGGAGYIGSHVVRQLSE--AGYTVVVYDNLSTGFPDALVHGER------LVTGDLSD 54
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
++ L V G T++HFAA S ++ NN T LL AC G V+RFI
Sbjct: 55 TARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHG-VERFI 113
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNN 194
ST VYG D S + E S +P NPY +K +E ++ ++G+ ++ R N
Sbjct: 114 FSSTAAVYGIPD--SGVA-AEESATVPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYFN 170
Query: 195 VYGPN-------QFPEKL-IPKFILLAMKG--QQLPIHG------NGSNVRSYLYCADVA 238
V G + + PE + K A G ++ I G +G+ +R Y++ D+A
Sbjct: 171 VAGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLA 230
Query: 239 EAFDVIL---HRGVIGHVYNVGTKKERSVLDV 267
A L +G NVG SV +V
Sbjct: 231 SAHLAALSYLEKGGESTRINVGYGSGSSVREV 262
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 194 (73.4 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 73/253 (28%), Positives = 117/253 (46%)
Query: 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM 147
D ++H A QT+V +F + N+ GT LL+A K G F+++S+ +VYG+
Sbjct: 55 DAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDVYGQV-- 112
Query: 148 ESDIGNPEASQLLP--TNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKL 205
++ P +L+P NPY+ +K AE L + + + G + R N GP Q +
Sbjct: 113 -AEAALPIHEELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPGQKDSFV 171
Query: 206 IPKFI--LLAMK-GQQ---LPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTK 259
I + MK G Q L + G+ R +L DV A+ +L G G VYNV +
Sbjct: 172 IASAARQIARMKQGLQANRLEV-GDIDVSRDFLDVQDVLSAYLRLLSHGEAGAVYNVCSG 230
Query: 260 KE---RSVLDVAADICTLFKLE----PEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKT 312
+E R ++++ ADI + +LE P + Q R H D GWK +
Sbjct: 231 QEQKIRELIELLADIAQV-ELEIVQDPARMRRAEQRRVRGSHARLHDTT-----GWKPEI 284
Query: 313 PWEEGLKLTL-EW 324
++ L+ L +W
Sbjct: 285 TIKQSLRAILSDW 297
Score = 49 (22.3 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 13 KKILITGAAGFIGSHV 28
+++ +TG +GF+G H+
Sbjct: 3 QRLFVTGLSGFVGKHL 18
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 204 (76.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 87/340 (25%), Positives = 144/340 (42%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK--FLKGD 71
K+L+TG G+IGSH ++I+ V LD L Y S + L + F++GD
Sbjct: 2 KVLVTGGMGYIGSHTCIQMIQ--AGMTPVILDNL-YNSKVTVLDRIEKVIGVRPQFVQGD 58
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
I L+ L+ I+ ++HFA V S E+ +NN+ GT VL+ A + G VK
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAG-VK 117
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
+ S+ VYGE + + E+ NPY +K E + + ++ +IT
Sbjct: 118 SLVFSSSATVYGEP---TSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLL 174
Query: 192 ------GNNVYG-----PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLY 233
G++ G P P L+P +A+ + + L + G+ G+ VR Y++
Sbjct: 175 RYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIH 234
Query: 234 CADVAEAFDVILHR-GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHY--VQDRP 290
D+A+ L + G ++ + D+ F+ +T+ Y V RP
Sbjct: 235 VMDLADGHIAALKKVGTCAGLHIYNLGTGKGYS--VLDVVKAFETASGRTVPYKLVDRRP 292
Query: 291 FNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329
+ Y+ D K + LGWK + W NP
Sbjct: 293 GDIAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNP 332
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 204 (76.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 87/340 (25%), Positives = 144/340 (42%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK--FLKGD 71
K+L+TG G+IGSH ++I+ V LD L Y S + L + F++GD
Sbjct: 2 KVLVTGGMGYIGSHTCIQMIQ--AGMTPVILDNL-YNSKVTVLDRIEKVIGVRPQFVQGD 58
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
I L+ L+ I+ ++HFA V S E+ +NN+ GT VL+ A + G VK
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAG-VK 117
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
+ S+ VYGE + + E+ NPY +K E + + ++ +IT
Sbjct: 118 SLVFSSSATVYGEP---TSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLL 174
Query: 192 ------GNNVYG-----PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLY 233
G++ G P P L+P +A+ + + L + G+ G+ VR Y++
Sbjct: 175 RYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIH 234
Query: 234 CADVAEAFDVILHR-GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHY--VQDRP 290
D+A+ L + G ++ + D+ F+ +T+ Y V RP
Sbjct: 235 VMDLADGHIAALKKVGTCAGLHIYNLGTGKGYS--VLDVVKAFETASGRTVPYKLVDRRP 292
Query: 291 FNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329
+ Y+ D K + LGWK + W NP
Sbjct: 293 GDIAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNP 332
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 203 (76.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 90/324 (27%), Positives = 141/324 (43%)
Query: 13 KKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK-FLK- 69
KK ITG G GS++ L+ K+Y + ++ L +++ + N + FL
Sbjct: 3 KKAFITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHY 62
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNI-YGTHVLLEACKLTG 128
GDIT ++N L+ + + AAQ+HV SF +T I GT +LEA K
Sbjct: 63 GDITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPV-YTMETIGLGTLNILEAIKNAD 121
Query: 129 QVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
K RF S+ E+YG D++S + E++ P +PY+ K A + Y SYGL
Sbjct: 122 NAKEIRFYQASSSEMYG--DVKS-VPQTESTPFNPRSPYACAKVFAHYQTINYRESYGLH 178
Query: 187 TITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEAFD 242
T N P + F + I I + G + I+ GN R + Y D EA
Sbjct: 179 ASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAKRDWGYAKDYVEAMW 238
Query: 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEK--TIHYVQDRPFNDHRYFLDD 300
++L + Y + T + SV ++ L L I RP +
Sbjct: 239 LMLQQDTPDD-YVIATGETWSVKELLEYSFNLVNLNWRDFVVIDPKYYRPAEVDLLLGEP 297
Query: 301 QKLK-RLGWKEKTPWEEGLKLTLE 323
+K K +LGW+ T + + +K+ LE
Sbjct: 298 KKAKEKLGWQPNTSFHKLIKIMLE 321
>ASPGD|ASPL0000028763 [details] [associations]
symbol:AN11081 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:BN001305
ProteinModelPortal:C8VEF0 EnsemblFungi:CADANIAT00002923 OMA:WIAVITE
Uniprot:C8VEF0
Length = 364
Score = 182 (69.1 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 66/252 (26%), Positives = 112/252 (44%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK 66
P+S P +LITG GFI H+ +L+ P+ I +D ++ +N+H AS +
Sbjct: 3 PSSLSP--VLITGGNGFIAYHIIAKLLAEDPNCTIHCID----INTTRNIH---ASDSVT 53
Query: 67 FLKGDITC-ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIY--GTHVLLEA 123
+ +GD++ AD+ + ++ + TI H A+ F + E +++ GTH LL +
Sbjct: 54 YHQGDLSSLADVSRIMELARPV-TIFHTASP-----EFSEAPESAYHDVIVTGTHHLLNS 107
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPT---NPYSATKAGAEMLVMAYH 180
G VK I+ ST V + + G + L P Y KA AE + A +
Sbjct: 108 AASIGTVKALINTSTSGVINDNHTDLVNGTEDMPILRPPVQKRLYCLAKADAEEAIQAAN 167
Query: 181 RSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
R +G T R +G + K + +A G+ G G N ++Y ++A+A
Sbjct: 168 RQHGFLTCALRPCLAFGERD--TNSMGKMVAVARAGRSRFQMGYGKNAYDFVYVGNLADA 225
Query: 241 FDVILHRGVIGH 252
+ H + H
Sbjct: 226 HLLAAHALIDAH 237
Score = 63 (27.2 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 298 LDDQKLKR-LGWKEKTPWEEGLKLTLEWYKKNP 329
L+ +K +R LG++ + +EG++ + W+K+NP
Sbjct: 328 LNCEKARRVLGYQPRVGMQEGIERGVRWFKENP 360
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 187 (70.9 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 59/185 (31%), Positives = 88/185 (47%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHP 58
M+ + + S K +L+TG AG+IGSH LI+N Y+ V D L + S+ L
Sbjct: 1 MTAQLQSESTS-KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEV 57
Query: 59 SRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTH 118
+ F + D+ + + ID+++HFA V S + +NNI GT
Sbjct: 58 L-TKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTV 116
Query: 119 VLLEACKLTGQVKRFIHVSTDEVYGE-TDMESDIGNPEASQLLPTNPYSATKAGAEMLVM 177
VLLE + V +F+ S+ VYG+ T + I PE L PTNPY TK E ++
Sbjct: 117 VLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILN 175
Query: 178 AYHRS 182
+ S
Sbjct: 176 DLYNS 180
Score = 68 (29.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 39/183 (21%), Positives = 75/183 (40%)
Query: 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAM-KGQQLPIHG 223
Y++ K + ++ Y G G + G P L+P +A+ + ++L I G
Sbjct: 178 YNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLG---IPNNLLPYMAQVAVGRREKLYIFG 234
Query: 224 N------GSNVRSYLYCADVAEAFDVIL--------HRGVIGHVYNVGTKKERSVLDVAA 269
+ G+ +R Y++ D+A+ L + G+ +N+G+ K +V +V
Sbjct: 235 DDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCRE-WNLGSGKGSTVFEVYH 293
Query: 270 DICTLFKLE-PEKTIHYVQDRPFND--HRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYK 326
C ++ P K V R D + D+ + L W+ + E+ K +W
Sbjct: 294 AFCKASGIDLPYK----VTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTT 349
Query: 327 KNP 329
+NP
Sbjct: 350 ENP 352
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 198 (74.8 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 70/247 (28%), Positives = 112/247 (45%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-HPSRAS-PNFKFLKGDI 72
IL+TG AG+IG+H L+ E++ LD L SS++ L R + + F +GDI
Sbjct: 3 ILVTGGAGYIGTHTVVELLN--AGSEVIVLDNLSN-SSIEALDRVERITGKSVTFYQGDI 59
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ--V 130
L+ + ID ++HFA V S ++ NN+ GT +L C++ + V
Sbjct: 60 LNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLIL---CQVMAEFKV 116
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS-------- 182
K + S+ VYG+ + + E TNPY +K E ++ H S
Sbjct: 117 KNLVFSSSATVYGDP---ASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSWNIAR 173
Query: 183 --YGLPTITTRGNNVYG--PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSY 231
Y P + + + G PN P L+P +A+ K + L + GN G+ VR Y
Sbjct: 174 LRYFNP-VGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDY 232
Query: 232 LYCADVA 238
++ D+A
Sbjct: 233 IHVVDLA 239
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 205 (77.2 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 77/264 (29%), Positives = 115/264 (43%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSRASPNFKFLKGDI 72
IL+TG AG+IGSH LI N Y++V +D L S ++ + + F DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISN--GYKVVIVDNLSNSSYDAVARIE-FIVKQHVPFYDVDI 62
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ +N + I ++HFAA V S + +NN+ GT LLE CK VK
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKT 121
Query: 133 FIHVSTDEVYGETDMESD---IGNPEASQLLPTNPYSATKAGAEMLVMAYHRS------- 182
+ S+ VYG+ D I PE + PTNPY TK E ++ + S
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVA 181
Query: 183 ---YGLPTITTRGNNVYG--PNQFPEKLIPKFILLAM-KGQQLPIHGNGSNVRSYLYCAD 236
Y P I + + G P P L+P +A+ + ++L I GN N R D
Sbjct: 182 ILRYFNP-IGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIRD 240
Query: 237 VAEAFDVIL-HRGVIGHVYNVGTK 259
D+ H + ++ N+ +K
Sbjct: 241 YIHVVDLAKGHIAALAYLKNLQSK 264
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 205 (77.2 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 77/264 (29%), Positives = 115/264 (43%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSRASPNFKFLKGDI 72
IL+TG AG+IGSH LI N Y++V +D L S ++ + + F DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISN--GYKVVIVDNLSNSSYDAVARIE-FIVKQHVPFYDVDI 62
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ +N + I ++HFAA V S + +NN+ GT LLE CK VK
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKT 121
Query: 133 FIHVSTDEVYGETDMESD---IGNPEASQLLPTNPYSATKAGAEMLVMAYHRS------- 182
+ S+ VYG+ D I PE + PTNPY TK E ++ + S
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVA 181
Query: 183 ---YGLPTITTRGNNVYG--PNQFPEKLIPKFILLAM-KGQQLPIHGNGSNVRSYLYCAD 236
Y P I + + G P P L+P +A+ + ++L I GN N R D
Sbjct: 182 ILRYFNP-IGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIRD 240
Query: 237 VAEAFDVIL-HRGVIGHVYNVGTK 259
D+ H + ++ N+ +K
Sbjct: 241 YIHVVDLAKGHIAALAYLKNLQSK 264
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 201 (75.8 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 89/333 (26%), Positives = 134/333 (40%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLD--YCSSLKNLHPSRASPNFKFL-KGD 71
+L+TGAAGF+GSH + L K ++ D + Y SLK F+ +GD
Sbjct: 114 VLVTGAAGFVGSHCSLALRKRGDG--VLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGD 171
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ L+ L I+H AAQ V + N + +NI G LLE K
Sbjct: 172 LNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQP 231
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
+ S+ VYG + E+ + P + Y+ATK E + Y+ YGL R
Sbjct: 232 AIVWASSSSVYG-LNTENPFSEEHRTDQ-PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 289
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSN---VRSYLYCADVAE----AFDVI 244
VYGP P+ F + G+ + I+ N R + Y D+ + A D
Sbjct: 290 FFTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTA 349
Query: 245 --------LHRGVIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFN-DH 294
RG VYN+G V + + + L + +K H ++ P N D
Sbjct: 350 EKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKK--HLIK-MPRNGDV 406
Query: 295 RYFLDDQKL--KRLGWKEKTPWEEGLKLTLEWY 325
Y + L K G+K T GL+ ++WY
Sbjct: 407 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 439
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 197 (74.4 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 78/267 (29%), Positives = 117/267 (43%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPN--FKFLKGDI 72
+LITG G+IGSH L+++ + EIV +D L SS K L + N F+K D+
Sbjct: 3 LLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSN-SSTKVLERIKQITNKTVTFIKADV 61
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ + + I+ ++HFA V S + NN+ GT LL QVK
Sbjct: 62 CDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKY-QVKN 120
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS---------- 182
+ S+ VYG S + A+ TNPY TK E ++ +S
Sbjct: 121 LVFSSSATVYGNN--VSPLNETMATSA--TNPYGQTKLMVEHVLFDLAKSDASWSIACLR 176
Query: 183 YGLPTITTRGNNVYG--PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLY 233
Y P I + + G PN P L+P +A+ + +QL I G+ G+ VR Y++
Sbjct: 177 YFNP-IGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDYIH 235
Query: 234 CADVAEAFDVILHRGVIGHVYNVGTKK 260
D+A+ L +GH GT K
Sbjct: 236 VVDLAQGHVKALES--LGHAK--GTVK 258
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 190 (71.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 57/173 (32%), Positives = 87/173 (50%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRAS----PNFKFLKG 70
IL+TG AG+IGSH LI + Y+++ +D L C+S + +R + KF K
Sbjct: 8 ILVTGGAGYIGSHTVIELINH--GYKVIIVDNL--CNSCYDA-VARVEFIVRKSIKFFKL 62
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+ + + + + I ++HFAA V S E+ +NNI GT LL + +V
Sbjct: 63 DLRDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMR-EHRV 121
Query: 131 KRFIHVSTDEVYGE-TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS 182
K + S+ VYG+ T ++ I PE+ PTNPY TK E ++ H S
Sbjct: 122 KTVVFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDLHTS 174
Score = 58 (25.5 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 35/149 (23%), Positives = 63/149 (42%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEAFDVIL-HRGV 249
P P L+P +A+ + ++L + G+ G+ +R Y++ D+A+ L +
Sbjct: 201 PLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPIRDYIHVVDLAKGHIAALNYLNK 260
Query: 250 IGH---VY---NVGTKKERSVLDVAADICTLFKLEPEKTIHY-VQDRPFND--HRYFLDD 300
I + +Y N+GT K SV D+ C E K + Y V R D + +
Sbjct: 261 INNSEGMYREWNLGTGKGSSVFDIYHAFCK----EVGKDLPYEVVGRRTGDVLNLTASPN 316
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKKNP 329
+ L WK + + + +W +NP
Sbjct: 317 RANSELKWKAELSITDACRDLWKWTIENP 345
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 183 (69.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 74/276 (26%), Positives = 131/276 (47%)
Query: 71 DITC-ADLMNYLLVSEGIDTIMHFA--AQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
D+T AD+ ++ + + I+ A H +N++ F N I T+V+ A +
Sbjct: 53 DLTRQADVESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQ-TNVIHSAYE-H 110
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL----PTNP-YSATKAGAEMLVMAYHRS 182
G VK+ + + + +Y + + PE++ L PTN Y+ K AY
Sbjct: 111 G-VKKLLFLGSSCIYPKFAPQPI---PESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQ 166
Query: 183 YGLPTITTRGNNVYGPNQ-F-PEK--LIP----KFILLAMKG-QQLPIHGNGSNVRSYLY 233
+G I+ N+YGPN F PE ++P +F + G +++ + G GS +R +L+
Sbjct: 167 HGWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLH 226
Query: 234 CADVAEAFDVILHR-GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFN 292
D+A+A +L R + HV N+G+ +E ++ ++A + + E + + + +P
Sbjct: 227 VDDLADACVFLLDRYSGLEHV-NIGSGQEVTIRELAELVKEVVGFEGK--LGWDCTKPDG 283
Query: 293 DHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKN 328
R +D KL LGW K +GL T +WY KN
Sbjct: 284 TPRKLMDSSKLASLGWTPKVSLRDGLSQTYDWYLKN 319
Score = 48 (22.0 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRL 32
+ E S K KI + G G +GS + +L
Sbjct: 5 IGSEVSSMSDKSAKIFVAGHRGLVGSAIVRKL 36
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 141 (54.7 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 46/162 (28%), Positives = 71/162 (43%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC-----SSLKNLHPSRASPNFKF 67
+ IL+TG AGFIG+H +L+K+ +++ +D D ++ L S F
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLKD--GFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDF 64
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
GD+ + L + D ++HFA V S N + +NN+ GT L E
Sbjct: 65 NLGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKY 124
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATK 169
K + S+ VYG+ + I E +L NPY TK
Sbjct: 125 N-CKMMVFSSSATVYGQPEK---IPCMEDFELKAMNPYGRTK 162
Score = 97 (39.2 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEAFDVILHR--- 247
P P L+P +A+ + +L ++G+ GS VR Y++ D+A+ L +
Sbjct: 202 PKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHVMDLADGHIAALRKLFA 261
Query: 248 -GVIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHR--YFLDDQKL 303
IG YN+GT + SVL++ A K +K + R D Y ++
Sbjct: 262 DPKIGCTAYNLGTGQGTSVLEMVA---AFEKASGKKIPIKLCPRRSGDATAVYASTEKAE 318
Query: 304 KRLGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
K LGWK K +E + +W NP WG
Sbjct: 319 KELGWKAKYGVDEMCRDQWKWANNNP--WG 346
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 189 (71.6 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 94/347 (27%), Positives = 139/347 (40%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSRASPNFKFLKGD 71
+I++TG AG+IGSH LI+ Y V +D L S ++K + S +F D
Sbjct: 7 RIMVTGGAGYIGSHTVIELIE--AGYTPVIVDNLSNSSLEAIKRVE-SITGKEIEFHHVD 63
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
I ++ + + I +++HFA V S ++ NNNI GT LL +VK
Sbjct: 64 IMNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMD-KHRVK 122
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS--------- 182
+ + S+ VYG+ + E L TNPY TK E ++ S
Sbjct: 123 KLVFSSSATVYGDPHT---VPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIML 179
Query: 183 -YGLPTITTRGNNVYG--PNQFPEKLIPKFILLAM-KGQQLPIHGNGSNVRSYLYCADVA 238
Y P + + + G P P L+P A+ K L I GN N D
Sbjct: 180 RYFNP-VGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFI 238
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSV---LDVAADICTL-----FKLEPEKTIHY--VQD 288
D L +G I + ++ +KK+ V L L K K I Y V
Sbjct: 239 HVVD--LAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSR 296
Query: 289 RPFNDHRYFLDDQK-LKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGD 334
R + F D K LK LGWK ++ + +W NP+ + D
Sbjct: 297 RKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGYSD 343
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 189 (71.6 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 85/341 (24%), Positives = 142/341 (41%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR 60
M PA ++ KK+ +TG GF GS + L + AL +L ++ +
Sbjct: 1 MKATVTPAFWQGKKVFLTGHTGFKGSWLALWLQSMGAQVQGFALMP-PTTPALFDV--AN 57
Query: 61 ASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVL 120
+ GDI + + +V D ++H AAQ V S+ E N+ GT +
Sbjct: 58 VVKGMQSCIGDIRDLQAITHSMVGFNPDVLIHMAAQPLVRLSYREPLETYATNVMGTLHV 117
Query: 121 LEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYH 180
LEA +L ++ ++V+TD+ Y + E G E + +PYS +K E++ +Y
Sbjct: 118 LEAARLCPNLRAIVNVTTDKCYENREWEW--GYREDEPMGGHDPYSNSKGCVELITASYR 175
Query: 181 RSY-GLPTI----TTRGNNVYGPNQFPE-KLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234
S+ P + R NV G + E +LIP + KGQ + + N R + +
Sbjct: 176 NSFFNTPQAAALASARAGNVIGGGDWAEDRLIPDILRAFEKGQPVTVR-NPQATRPWQHV 234
Query: 235 ADVAEAFDVIL-HRGVIGHVY----NVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDR 289
+ + V+ H GH + N G K E V + + + H+ DR
Sbjct: 235 LEPLSGYLVLAEHLWKNGHQFAQGWNFGPKDE-DARPVEWILNYMVDSWGDGA-HWQLDR 292
Query: 290 PFNDHR--YF-LDDQKLK-RLGWKEKTPWEEGLKLTLEWYK 326
+ H Y LD K + RL W E+ L ++W++
Sbjct: 293 DSHPHEANYLKLDISKARARLNWAPTWNLEKTLSRIVQWHR 333
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 172 (65.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 52/166 (31%), Positives = 82/166 (49%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR--ASPNFKFLKGDI 72
+L+TG G+IGS T L++ Y++V D L Y SS + L+ + +F + D+
Sbjct: 6 VLVTGGTGYIGSFTTLALLE--AGYKVVVADNL-YNSSAEALNRIELISGKKAEFAQLDV 62
Query: 73 TCADLMNYLLVSE-GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
T + + + ID+++HFAA V S ++ + N+YGT LL + + V
Sbjct: 63 TDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSM-VRHNVT 121
Query: 132 RFIHVSTDEVYGETDMESD-IGNPEASQLLPTNPYSATKAGAEMLV 176
+ S+ VYG+ D I PE L PTNPY TK E+ +
Sbjct: 122 NIVFSSSATVYGDATRFPDMIPIPEHCPLGPTNPYGNTKFAIELAI 167
Score = 60 (26.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 32/145 (22%), Positives = 58/145 (40%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAE----AFDVILH 246
P P L+P +A K ++L + G+ G+ +R Y++ D+A+ A + +
Sbjct: 213 PQGVPYNLLPLLAQVATGKREKLLVFGDDYASHDGTAIRDYIHILDLADGHLKALNYLRA 272
Query: 247 RGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD--QKLK 304
+N+GT + +V ++ I K + V R D + +
Sbjct: 273 NNPGVRAWNLGTGRGSTVYEM---IRAFSKAVGRDLPYEVAPRRAGDVLNLTSNPTRANT 329
Query: 305 RLGWKEKTPWEEGLKLTLEWYKKNP 329
LGWK + E+ + W K NP
Sbjct: 330 ELGWKAQRTLEQACEDLWLWTKNNP 354
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 181 (68.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 62/234 (26%), Positives = 104/234 (44%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
K +LI G +GF+G H+ + P +I D D L + KF KG
Sbjct: 3 KIDSVLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVD-DIKFHKG 61
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+T D M + + ++H A+ H N + ++ N + GT +++ CK G V
Sbjct: 62 DLTSPDDMENAINESKANVVVHCASPMHGQNP--DIYDIVN--VKGTRNVIDMCKKCG-V 116
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNP---YSATKAGAE-MLVMAYHRSYGLP 186
++ S+ V D+ N + + +P P Y+ TKA AE M++ A S
Sbjct: 117 NILVYTSSAGVIFNGQ---DVHNADETWPIPEVPMDAYNETKAIAEDMVLKANDPSSDFY 173
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
T+ R ++GP +L+P +A GQ G+ +N+ + Y +VA+A
Sbjct: 174 TVALRPAGIFGPGD--RQLVPGLRQVAKLGQSKFQIGDNNNLFDWTYAGNVADA 225
Score = 48 (22.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 294 HRYFLDDQKLKRLGWKEKTPWEEGLKLTLEW 324
+RY + K LG+ + EEG+ TL W
Sbjct: 314 YRYHNIAKAKKLLGYTPRVGIEEGINKTLAW 344
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 180 (68.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 65/235 (27%), Positives = 103/235 (43%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI--T 73
++TG GF H+ L++ Y + + D + + N H G +
Sbjct: 13 VVTGGRGFAARHLVEMLVR-YQMFHVRIADLAP--AIVLNPHEETGILGEAIRSGRVQYV 69
Query: 74 CADLMNYLLVSEGI---DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
ADL N V +G + + H AA D+S N + N+ GT +++AC G V
Sbjct: 70 SADLRNKTQVVKGFQGAEVVFHMAAP---DSSINNHQLQYSVNVQGTTNVIDACIEVG-V 125
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNP-----YSATKAGAEMLVMAYHRSYGL 185
KR I+ S+ V + G A + LP P YSATKA E L++ + GL
Sbjct: 126 KRLIYTSSPSVV----FDGVHGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGL 181
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
T R ++++GP + ++P + A G+ I G+GSN + Y +V A
Sbjct: 182 LTCCIRPSSIFGPGD--KLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVVHA 234
Score = 53 (23.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 294 HRYFLDDQKLK-RLGWKEKTPWEEGLKLTLE 323
+R F D K K RLG+ P +EG+K T++
Sbjct: 327 NRTF-DSSKAKDRLGYSPVVPLQEGIKRTID 356
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 58/180 (32%), Positives = 87/180 (48%)
Query: 13 KKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--PSRASPNFKFL 68
KK+ LITG G GS++ L+ K Y + I L + +L+ P NFK
Sbjct: 3 KKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLH 62
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLT 127
GD+T + + +L D + + AQ+HV SF S E+T + + GT LLEA +
Sbjct: 63 YGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSF-QSPEYTADVDAIGTLRLLEAIRFL 121
Query: 128 GQVKR--FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G K+ F ST E+YG + +I E + P +PY+ K A + + Y SYG+
Sbjct: 122 GLTKKTKFYQASTSELYG---LVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 58/180 (32%), Positives = 87/180 (48%)
Query: 13 KKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--PSRASPNFKFL 68
KK+ LITG G GS++ L+ K Y + I L + +L+ P NFK
Sbjct: 3 KKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLH 62
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLT 127
GD+T + + +L D + + AQ+HV SF S E+T + + GT LLEA +
Sbjct: 63 YGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSF-QSPEYTADVDAIGTLRLLEAIRFL 121
Query: 128 GQVKR--FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G K+ F ST E+YG + +I E + P +PY+ K A + + Y SYG+
Sbjct: 122 GLTKKTKFYQASTSELYG---LVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 185 (70.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 75/274 (27%), Positives = 128/274 (46%)
Query: 6 EPASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPS---- 59
E A+++ +K+ LITG +G GS++ L+ K Y + I+ + +++L+ +
Sbjct: 43 ELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITH 102
Query: 60 RASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTH 118
+F GD+T + + L+ + + H AAQ+HV SF E+T + GT
Sbjct: 103 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLP-EYTAEVDAVGTL 161
Query: 119 VLLEA---CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEML 175
LL+A C+LT +V RF ST E+YG+ +I E + P +PY+ K +
Sbjct: 162 RLLDAIHACRLTEKV-RFYQASTSELYGKVQ---EIPQSEKTPFYPRSPYAVAKMYGYWI 217
Query: 176 VMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSY 231
V+ Y +Y + N P + F + I + + GQQ I GN S +R +
Sbjct: 218 VVNYREAYNMFACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDW 277
Query: 232 LYCADVAEA-FDVILHRGVIGHVYNVGTKKERSV 264
+ + EA + ++ H V + T K+ SV
Sbjct: 278 GHAREYVEAMWRILQHDSPDDFV--IATGKQFSV 309
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 185 (70.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 75/274 (27%), Positives = 128/274 (46%)
Query: 6 EPASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPS---- 59
E A+++ +K+ LITG +G GS++ L+ K Y + I+ + +++L+ +
Sbjct: 43 ELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITH 102
Query: 60 RASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTH 118
+F GD+T + + L+ + + H AAQ+HV SF E+T + GT
Sbjct: 103 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLP-EYTAEVDAVGTL 161
Query: 119 VLLEA---CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEML 175
LL+A C+LT +V RF ST E+YG+ +I E + P +PY+ K +
Sbjct: 162 RLLDAIHACRLTEKV-RFYQASTSELYGKVQ---EIPQSEKTPFYPRSPYAVAKMYGYWI 217
Query: 176 VMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSY 231
V+ Y +Y + N P + F + I + + GQQ I GN S +R +
Sbjct: 218 VVNYREAYNMFACNGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDW 277
Query: 232 LYCADVAEA-FDVILHRGVIGHVYNVGTKKERSV 264
+ + EA + ++ H V + T K+ SV
Sbjct: 278 GHAREYVEAMWRILQHDSPDDFV--IATGKQFSV 309
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 186 (70.5 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 67/247 (27%), Positives = 111/247 (44%)
Query: 7 PASYKPKK-ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRA---- 61
PA+ + ++ ++TG GF H+ L++ YE+ + D ++ L P
Sbjct: 3 PAATETERWCVVTGGRGFAARHLVEMLVR----YEMFCVRIADLAPAIM-LDPQEGNGVL 57
Query: 62 -----SPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYG 116
S +++ D+ D + +G + + H AA D+S N + N+ G
Sbjct: 58 DEGLRSGRVQYISADLR--DKSQVVKAFQGAEVVFHMAAP---DSSINNHQLQYSVNVQG 112
Query: 117 THVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP---TNPYSATKAGAE 173
T +++AC G VKR I+ S+ V D I N S P + YSATKA E
Sbjct: 113 TQNVIDACVDVG-VKRLIYTSSPSVV--FDGVHGILNGTESMAYPIKHNDSYSATKAEGE 169
Query: 174 MLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233
L+M + GL T R ++++GP L+P + A G+ I G+G+N+ + Y
Sbjct: 170 ELIMKANGRNGLLTCCIRPSSIFGPGD--RLLVPSLVAAARAGKSKFIIGDGNNLYDFTY 227
Query: 234 CADVAEA 240
+VA A
Sbjct: 228 VENVAHA 234
Score = 47 (21.6 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 299 DDQKLK-RLGWKEKTPWEEGLKLTLE 323
D K K RLG+ P +EG++ T++
Sbjct: 331 DSTKAKDRLGYAPVVPLQEGIRRTID 356
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 180 (68.4 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 87/328 (26%), Positives = 148/328 (45%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL---KG 70
++ ITG AGFIGS + L + + EI+ +DK+ ++ +N + ++ +FK L G
Sbjct: 2 RVAITGGAGFIGSQLALNLQEKH---EILIIDKMRSSATFENGN-LQSFGHFKNLLEFDG 57
Query: 71 DITCADLMNYLLVSEGID----TIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
++ D+ + ++ + D I H AA + TN N + + L + L
Sbjct: 58 ELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTNLNTFKDFIEL-SIDL 116
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
++ I+ S+ VYG+ +G E P NPY+ +K + L Y+ L
Sbjct: 117 NAKL---IYASSASVYGDAKSPQTVGKDEE----PKNPYAFSKLMMDKLAKKYYDKAHL- 168
Query: 187 TITTRGNNVYGPNQFPEKLIPKFIL------LAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
+ R NVYG +F + +L LA K +L G+ R + Y DV A
Sbjct: 169 -VGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRL-FEGSDQIYRDFTYIKDVINA 226
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD 300
++I G VYNVG+ K R+ D+ DI +L+ + Y+ + P+ F +
Sbjct: 227 -NLIALDSKCG-VYNVGSGKARTFQDIV-DILQK-ELKTDLPCEYIPN-PYVKSYQFHTE 281
Query: 301 QKLKRL-GWKEKTPWEEGLKLTLEWYKK 327
KL + ++ K EEG+K L+ K+
Sbjct: 282 AKLDQTWDYQPKFSLEEGIKDYLDEIKR 309
>UNIPROTKB|Q5IFP1 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9615 "Canis lupus familiaris" [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
CTD:3284 EMBL:AY739720 RefSeq:NP_001010954.1 UniGene:Cfa.13172
ProteinModelPortal:Q5IFP1 STRING:Q5IFP1 GeneID:483146
KEGG:cfa:483146 InParanoid:Q5IFP1 NextBio:20857590 Uniprot:Q5IFP1
Length = 373
Score = 165 (63.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 63/233 (27%), Positives = 100/233 (42%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + + L + EI ALDK L+ ++ ++GDI
Sbjct: 7 LVTGAGGFLGQRIVHLLAEEKELQEIRALDKAFRPELLEEFSKLQSKTKLTMVEGDILDE 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +G ++H A+ V N N N+ GT +LLEAC V FI+
Sbjct: 67 QCLKR--ACQGTSVVIHTASVIDVMNVIHRE-TIMNVNLKGTQLLLEACA-QASVPIFIY 122
Query: 136 VSTDEVYGETDMESDIGNPEASQLLPTN---PYSATKAGAEMLVMAYH----RSYG-LPT 187
ST EV G I N + L + PY +K AE V+A + ++ G L T
Sbjct: 123 TSTIEVAGPNSYRDIIQNAHEEEHLESTWSAPYPYSKKLAEKAVLAANGWALKNGGTLHT 182
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
R +YG + +I A++ + H + ++ + +Y +VA A
Sbjct: 183 CALRPMYIYGEGSI---FLYNYIYKALRNNGILTHHSKFSIVNPVYVGNVAWA 232
Score = 58 (25.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 285 YVQDRPFNDHRYFLDD-------QKLKR-LGWKEKTPWEEGLKLTLEW 324
Y PFN H L + +K +R LG+K WEE + T EW
Sbjct: 309 YKYQPPFNRHMVTLSNSIFTFSYKKAQRDLGYKPLFSWEEAKQKTTEW 356
>UNIPROTKB|F1PED8 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:AAEX03011027 Ensembl:ENSCAFT00000015969 Uniprot:F1PED8
Length = 377
Score = 165 (63.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 63/233 (27%), Positives = 100/233 (42%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + + L + EI ALDK L+ ++ ++GDI
Sbjct: 11 LVTGAGGFLGQRIVHLLAEEKELQEIRALDKAFRPELLEEFSKLQSKTKLTMVEGDILDE 70
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +G ++H A+ V N N N+ GT +LLEAC V FI+
Sbjct: 71 QCLKR--ACQGTSVVIHTASVIDVMNVIHRE-TIMNVNLKGTQLLLEACA-QASVPIFIY 126
Query: 136 VSTDEVYGETDMESDIGNPEASQLLPTN---PYSATKAGAEMLVMAYH----RSYG-LPT 187
ST EV G I N + L + PY +K AE V+A + ++ G L T
Sbjct: 127 TSTIEVAGPNSYRDIIQNAHEEEHLESTWSAPYPYSKKLAEKAVLAANGWALKNGGTLHT 186
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
R +YG + +I A++ + H + ++ + +Y +VA A
Sbjct: 187 CALRPMYIYGEGSI---FLYNYIYKALRNNGILTHHSKFSIVNPVYVGNVAWA 236
Score = 58 (25.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 285 YVQDRPFNDHRYFLDD-------QKLKR-LGWKEKTPWEEGLKLTLEW 324
Y PFN H L + +K +R LG+K WEE + T EW
Sbjct: 313 YKYQPPFNRHMVTLSNSIFTFSYKKAQRDLGYKPLFSWEEAKQKTTEW 360
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 70/244 (28%), Positives = 113/244 (46%)
Query: 13 KKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK-FLK- 69
K+ LITG +G GS++ L+ K Y + ++ + +L+ P+ + FL
Sbjct: 2 KRALITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHY 61
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLTG 128
GD+ A +N +L D I + AQ+HV SF E+T + GT LLE + TG
Sbjct: 62 GDLNDASSINRVLREVRPDEIYNLGAQSHVRVSFDVP-EYTGEIDALGTVRLLEGIRETG 120
Query: 129 QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
RF S+ E+YG+ +E+ E + P +PY+ KA A + + Y SYG+
Sbjct: 121 LNTRFYQASSSELYGKV-VETP--QKETTPFYPRSPYACAKAYAYYITVNYRESYGMYAC 177
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLA---MK-GQQLPIH-GNGSNVRSYLYCADVAEAFDV 243
N P + E + + I A +K G Q ++ GN R + + D EA +
Sbjct: 178 NGILFNHESPRR-GETFVTRKITRAAGRIKTGLQDRLYLGNLDAKRDWGFAGDYVEAMWL 236
Query: 244 ILHR 247
+L +
Sbjct: 237 MLQQ 240
>TIGR_CMR|CPS_0589 [details] [associations]
symbol:CPS_0589 "sugar epimerase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0005975
"carbohydrate metabolic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 RefSeq:YP_267339.1
ProteinModelPortal:Q489C5 STRING:Q489C5 GeneID:3522305
KEGG:cps:CPS_0589 PATRIC:21464507 HOGENOM:HOG000167991 OMA:CAARAHI
BioCyc:CPSY167879:GI48-676-MONOMER Uniprot:Q489C5
Length = 321
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 70/224 (31%), Positives = 97/224 (43%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI- 72
KI ITGA GF+G +T L + + D I + L+NL + N + GDI
Sbjct: 2 KIAITGATGFLGKPLTKELSERFCDDSIAPI--------LRNLSQEFNNVNC-IVVGDIG 52
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNS--FEFTNNNIYGTHVLLEACKLTGQV 130
D N L E I ++H AA+ HV N F N+ GT V +A +G V
Sbjct: 53 PMTDWSNKL---EDIGCVIHCAARVHVMNEKNEDPLDAFREVNVRGTLVFAKAAAKSG-V 108
Query: 131 KRFIHVSTDEVYGE-TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
KRFI VS+ +V GE T + N + P +PY +K+ AE + G+ +
Sbjct: 109 KRFIFVSSIKVNGESTTSKKPYKNSDEPS--PKDPYGISKSEAEAGLKLIADETGMEVVI 166
Query: 190 TRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLY 233
R VYGP + + A G LP N RS +Y
Sbjct: 167 IRPPLVYGPGV--KANFAAMLKFASTGIPLPFGCISHNKRSMVY 208
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 76/278 (27%), Positives = 127/278 (45%)
Query: 1 MSGEFEPASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHP 58
+S E +++ +K+ LITG G GS++ L+ K Y + I+ + +++L+
Sbjct: 21 LSSFAELKAFRERKVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYG 80
Query: 59 S----RASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-N 113
+ S +F GD+T + + L+ + I H AAQ+HV SF E+T +
Sbjct: 81 NPVTHNGSASFSLHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLP-EYTAEVD 139
Query: 114 IYGTHVLLEA---CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170
GT LL+A C+LT +V RF ST E+YG+ +I E + P +PY+ K
Sbjct: 140 AVGTLRLLDAIHACRLTEKV-RFYQASTSELYGKVQ---EIPQSELTPFYPRSPYAVAKM 195
Query: 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGS 226
+V+ Y +Y + N P + F + I + + QQ I GN S
Sbjct: 196 YGYWIVVNYREAYKMFACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNLS 255
Query: 227 NVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSV 264
+R + + + EA IL + + + T K+ SV
Sbjct: 256 ALRDWGHAKEYVEAMWRILQQDTPDD-FVIATGKQFSV 292
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 76/278 (27%), Positives = 127/278 (45%)
Query: 1 MSGEFEPASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHP 58
+S E +++ +K+ LITG G GS++ L+ K Y + I+ + +++L+
Sbjct: 21 LSSFAELKAFRERKVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYG 80
Query: 59 S----RASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-N 113
+ S +F GD+T + + L+ + I H AAQ+HV SF E+T +
Sbjct: 81 NPVTHNGSASFSLHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLP-EYTAEVD 139
Query: 114 IYGTHVLLEA---CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKA 170
GT LL+A C+LT +V RF ST E+YG+ +I E + P +PY+ K
Sbjct: 140 AVGTLRLLDAIHACRLTEKV-RFYQASTSELYGKVQ---EIPQSELTPFYPRSPYAVAKM 195
Query: 171 GAEMLVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGS 226
+V+ Y +Y + N P + F + I + + QQ I GN S
Sbjct: 196 YGYWIVVNYREAYKMFACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNLS 255
Query: 227 NVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSV 264
+R + + + EA IL + + + T K+ SV
Sbjct: 256 ALRDWGHAKEYVEAMWRILQQDTPDD-FVIATGKQFSV 292
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 174 (66.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 69/259 (26%), Positives = 113/259 (43%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRA------SPNFK 66
+ IL+TG AGFIG+H +L+ +++ +D LD S ++ +H R S +
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLNQ--GFKVTIIDNLDN-SVVEAVHRVRELVGPDLSTKLE 63
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F GD+ + L ++ D ++HFA V S GN + +NN+ GT L E
Sbjct: 64 FNLGDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAK 123
Query: 127 TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG-L 185
K + S+ VYG+ ++ + E +L NPY TK E + H +
Sbjct: 124 YN-CKMMVFSSSATVYGQPEIVPCV---EDFELQAMNPYGRTKLFLEEIARDIHAAEPEW 179
Query: 186 PTITTRGNNVYG----------PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNV 228
I R N G P P L+P +A+ + +L + G+ GS V
Sbjct: 180 KIILLRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAV 239
Query: 229 RSYLYCADVAEAFDVILHR 247
R Y++ D+A+ L++
Sbjct: 240 RDYIHVMDLADGHVAALNK 258
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 175 (66.7 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 52/177 (29%), Positives = 85/177 (48%)
Query: 159 LLPTNP-YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ-FP-EK------LIPKF 209
L PTN Y+ K L +Y+R YG I N+YGPN F EK LI KF
Sbjct: 130 LEPTNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLYGPNDNFDLEKSHVLPALIRKF 189
Query: 210 ILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVA 268
+ G + + G G+ +R +++ DVA+A ++ + N+G+ +E S+ D+A
Sbjct: 190 HEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRHHEGNDIVNIGSGEEISIRDLA 249
Query: 269 ADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWY 325
+ + E E + + +P R D +L LGW+ + E+G++ T EW+
Sbjct: 250 LLVKIVVGFEGE--LVFDASKPDGTPRKLSDVSRLHSLGWRHRIGLEDGVRETYEWF 304
Score = 37 (18.1 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 14 KILITGAAGFIGSHVTNRL 32
+I + G G +GS + +L
Sbjct: 6 RIYVAGHRGLVGSAIVRKL 24
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 169 (64.5 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 70/250 (28%), Positives = 114/250 (45%)
Query: 11 KPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P-SRASPNF 65
KP+K+ +ITG G GS++ L+ K Y + I+ +++L+ P + N
Sbjct: 19 KPRKVAVITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQNPQTHTEGNM 78
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEA- 123
K GD+T + + ++ I + AQ+HV SF + E+T N + GT LL+A
Sbjct: 79 KLHYGDLTDSTCLVKIINQVKPTEIYNLGAQSHVKISFELA-EYTANVDGVGTLRLLDAI 137
Query: 124 --CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHR 181
C LT VK F ST E+YG+ +I E + P +PY A K A +V+ +
Sbjct: 138 KTCGLTNSVK-FYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 193
Query: 182 SYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADV 237
+Y L + N P + F + I + + GQ GN + R + + D
Sbjct: 194 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQLESFSLGNLDSKRDWGHAKDY 253
Query: 238 AEAFDVILHR 247
EA ++L +
Sbjct: 254 VEAMWLMLQQ 263
Score = 48 (22.0 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 299 DDQK-LKRLGWKEKTPWEEGLK----LTLEWYKKNPH 330
D K L +LGWK K +EE +K + K NP+
Sbjct: 333 DSTKALTKLGWKAKITFEELVKEMVDADIHLMKNNPN 369
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 164 (62.8 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 63/232 (27%), Positives = 103/232 (44%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+ +LI G +GF+G H+ + ++ P+ I D L S +F KGD+
Sbjct: 6 QSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPS-KIQFFKGDL 64
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE-FTNNNIYGTHVLLE-ACKLTGQV 130
T ++ + D I+H A+ H G E + N+ GT LL A KL V
Sbjct: 65 TSDKDVSDAINQSKCDVIVHSASPMH-----GLPQEIYEKVNVQGTKNLLSVAQKL--HV 117
Query: 131 KRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
K ++ S+ V G+ + +D P + + Y+ TKA AE VM + + L T+
Sbjct: 118 KALVYTSSAGVIFNGQDVINADETWPYPE--VHMDGYNETKAAAEEAVMKANDNDQLRTV 175
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
R ++GP +L+P A GQ G+ +N+ + Y +VA+A
Sbjct: 176 CLRPAGIFGPGD--RQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADA 225
Score = 52 (23.4 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 295 RYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKN 328
RY + K LG+K + E G+ TL+W ++
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGINYTLDWMNED 349
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 164 (62.8 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 63/232 (27%), Positives = 103/232 (44%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
+ +LI G +GF+G H+ + ++ P+ I D L S +F KGD+
Sbjct: 6 QSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRPLPEKLSKYFTFDPS-KIQFFKGDL 64
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE-FTNNNIYGTHVLLE-ACKLTGQV 130
T ++ + D I+H A+ H G E + N+ GT LL A KL V
Sbjct: 65 TSDKDVSDAINQSKCDVIVHSASPMH-----GLPQEIYEKVNVQGTKNLLSVAQKL--HV 117
Query: 131 KRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 188
K ++ S+ V G+ + +D P + + Y+ TKA AE VM + + L T+
Sbjct: 118 KALVYTSSAGVIFNGQDVINADETWPYPE--VHMDGYNETKAAAEEAVMKANDNDQLRTV 175
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
R ++GP +L+P A GQ G+ +N+ + Y +VA+A
Sbjct: 176 CLRPAGIFGPGD--RQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADA 225
Score = 52 (23.4 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 295 RYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKN 328
RY + K LG+K + E G+ TL+W ++
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGINYTLDWMNED 349
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 152 (58.6 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 48/169 (28%), Positives = 79/169 (46%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ILITG AGF+GSH+T++L+ + +E+ +D + +N+ NF+ + D+
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 88
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
+ L + +D I H A+ N N + N GT +L K G R
Sbjct: 89 -----VEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 139
Query: 133 FIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAY 179
+ ST EVYG+ ++ +S+ + + P Y K AE + AY
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 126 (49.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 48/172 (27%), Positives = 75/172 (43%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC----SSL-KNLHPSR--ASPNF 65
+K+L+TG AG+IGSH L++ Y V +D SS+ ++L + +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSV 60
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
+F + DI + L ++HFA V S ++ N+ GT LLE K
Sbjct: 61 EFEEMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 126 LTGQVKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNPYSATKAGAEMLV 176
G VK + S+ VYG + D +P TNPY +K E ++
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC---TNPYGKSKFFIEEMI 168
Score = 92 (37.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 39/148 (26%), Positives = 62/148 (41%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEAFDVILHR--G 248
P P L+P +A+ + + L + GN G+ VR Y++ D+A+ L +
Sbjct: 201 PQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE 260
Query: 249 VIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHR--YFLDDQKLKR 305
G +YN+GT SVL + + + K +K + V R D Y LK
Sbjct: 261 QCGCRIYNLGTGTGYSVLQM---VRAMEKASGKKIPYKVVARREGDVAACYANPSLALKE 317
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
LGW + + W K+NP +G
Sbjct: 318 LGWTAALGLDRMCEDLWRWQKQNPSGFG 345
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 171 (65.3 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 73/260 (28%), Positives = 114/260 (43%)
Query: 7 PASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--------SLKNLHP 58
PA+ ++IL+TG AG+IGSH +L + YE V +D L + SL+ +
Sbjct: 2 PAAMA-ERILVTGGAGYIGSHCVLQLAE--AGYEPVVIDNLRNAARGPGALPESLQRVQR 58
Query: 59 SRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTH 118
+P F + DIT + L + +MHFA V S E+ N N+ GT
Sbjct: 59 IAQTP-IAFQELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTI 117
Query: 119 VLLEACKLTGQVKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNPYSATKAGAEMLVM 177
LLEA + V+ + S+ VYG+ + D +P TNPY +K E ++
Sbjct: 118 RLLEAMEAYS-VRNIVFSSSATVYGDPQYLPLDEKHPVGGC---TNPYGKSKYFIEEMIQ 173
Query: 178 AYHRSY-GLPTITTRGNNVYG----------PNQFPEKLIPKFILLAMKGQQ-LPIHGN- 224
++ G I R N G P P L+P +A+ Q+ L + GN
Sbjct: 174 DLCKAEKGWNAILLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGND 233
Query: 225 -----GSNVRSYLYCADVAE 239
G+ +R Y++ D+A+
Sbjct: 234 YETADGTGIRDYIHVVDLAK 253
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 171 (65.3 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 68/258 (26%), Positives = 104/258 (40%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSRAS--PNFKFL 68
+ +L++G AG+IGSH +L+ Y +V +D LD S SL+ + A F
Sbjct: 4 RNVLVSGGAGYIGSHTVLQLLLG--GYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFH 61
Query: 69 KGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
+ D+ + + D ++HFA V S + NNN+ GT LLE G
Sbjct: 62 QVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHG 121
Query: 129 QVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM-AYHRSYGLPT 187
K + S+ VYG ++ E + NPY TK E + Y
Sbjct: 122 -CKNLVFSSSATVYGSP---KEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKI 177
Query: 188 ITTRGNNVYG----------PNQFPEKLIPKFILLAMKGQQ--LPIHGN------GSNVR 229
I R N G P P L+P F+ G++ L + GN G+ VR
Sbjct: 178 ILLRYFNPVGAHPSGDIGEDPRGIPNNLMP-FVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236
Query: 230 SYLYCADVAEAFDVILHR 247
Y++ D+A+ L +
Sbjct: 237 DYIHVIDLADGHIAALRK 254
>RGD|1592771 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid
dehydrogenase/delta-5-delta-4 isomerase type II" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:1592771 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 163 (62.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 69/244 (28%), Positives = 109/244 (44%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ E+ ALDK+ + + + L+GDI A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +GI ++H A+ + N+ GT LLEA + V FI+
Sbjct: 67 QYLRR--ACQGISVVIHTASVMDFSRVLPRQ-TILDVNLKGTQNLLEA-GIHASVPAFIY 122
Query: 136 VSTDEVYGETDMESDIGN---PEASQLLPTNPYSATKAGAEMLVMAYHRSY----G-LPT 187
ST +V G + I N E + +NPY +K AE V+A + S G L T
Sbjct: 123 CSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEKAVLAANGSILKNGGTLHT 182
Query: 188 ITTRGNNVYGPN-QFPEKLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVIL 245
R +YG QF + + I++A+K + L + G S V +Y +VA A ++
Sbjct: 183 CALRPMYIYGERGQF----LSRIIIMALKNKGVLNVTGKFSIVNP-VYVGNVAWAH-ILA 236
Query: 246 HRGV 249
RG+
Sbjct: 237 ARGL 240
Score = 52 (23.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 290 PFNDHRYFLDDQKL----KR----LGWKEKTPWEEGLKLTLEW 324
PFN H L + K K+ LG++ WEE + T EW
Sbjct: 314 PFNCHLVTLSNSKFTFSYKKAQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P22072 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:1592771
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 163 (62.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 69/244 (28%), Positives = 109/244 (44%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ E+ ALDK+ + + + L+GDI A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +GI ++H A+ + N+ GT LLEA + V FI+
Sbjct: 67 QYLRR--ACQGISVVIHTASVMDFSRVLPRQ-TILDVNLKGTQNLLEA-GIHASVPAFIY 122
Query: 136 VSTDEVYGETDMESDIGN---PEASQLLPTNPYSATKAGAEMLVMAYHRSY----G-LPT 187
ST +V G + I N E + +NPY +K AE V+A + S G L T
Sbjct: 123 CSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEKAVLAANGSILKNGGTLHT 182
Query: 188 ITTRGNNVYGPN-QFPEKLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVIL 245
R +YG QF + + I++A+K + L + G S V +Y +VA A ++
Sbjct: 183 CALRPMYIYGERGQF----LSRIIIMALKNKGVLNVTGKFSIVNP-VYVGNVAWAH-ILA 236
Query: 246 HRGV 249
RG+
Sbjct: 237 ARGL 240
Score = 52 (23.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 290 PFNDHRYFLDDQKL----KR----LGWKEKTPWEEGLKLTLEW 324
PFN H L + K K+ LG++ WEE + T EW
Sbjct: 314 PFNCHLVTLSNSKFTFSYKKAQRDLGYEPLVSWEEAKQKTSEW 356
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 67/260 (25%), Positives = 121/260 (46%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TG+ G++G+ + + L++ + + AL + S L +L P P + GD+T
Sbjct: 14 KILVTGSTGYLGARLCHVLLRR--GHSVRALVRRT--SDLSDL-P----PEVELAYGDVT 64
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
D + G D + H AA V+ + F + N+ G +LEA K T V++
Sbjct: 65 --DYRSLTDACSGCDIVFHAAAL--VEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKI 120
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGN 193
I+ S+ G TD N ++ Y +KA A+ + + S G+P I
Sbjct: 121 IYTSSFFALGSTDGSVANENQVHNERFFCTEYERSKAVADKMALNA-ASEGVPIILLYPG 179
Query: 194 NVYGPNQFPE-KLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEAFDVILHRGVIG 251
++GP + ++ + ++ G+ LP + G+G++ S+ + DV E + +G +G
Sbjct: 180 VIFGPGKLTSANMVARMLIERFNGR-LPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGRLG 238
Query: 252 HVYNV-GTKKE-RSVLDVAA 269
Y + G + V D+AA
Sbjct: 239 ERYLLTGENASFKLVFDMAA 258
>RGD|67377 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA]
[GO:0004769 "steroid delta-isomerase activity" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006700
"C21-steroid hormone biosynthetic process" evidence=IDA] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=TAS]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030283
"testosterone dehydrogenase [NAD(P)] activity" evidence=TAS]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEP] [GO:0034698 "response to
gonadotropin stimulus" evidence=IEP] [GO:0034757 "negative
regulation of iron ion transport" evidence=IMP] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:67377
GO:GO:0016021 GO:GO:0046686 GO:GO:0021766 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 GO:GO:0006702
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0033327 GO:GO:0051412 GO:GO:0010288
GeneTree:ENSGT00550000074557 EMBL:L17138 EMBL:BC089937
IPI:IPI00555268 PIR:A48769 RefSeq:NP_058961.4 RefSeq:XP_003749409.1
UniGene:Rn.109394 ProteinModelPortal:Q62878 STRING:Q62878
Ensembl:ENSRNOT00000026306 GeneID:100911154 GeneID:29632
KEGG:rno:100911154 KEGG:rno:29632 UCSC:RGD:67377 CTD:15497
InParanoid:Q62878 NextBio:609864 Genevestigator:Q62878
GermOnline:ENSRNOG00000019441 GO:GO:0030283 GO:GO:0006700
GO:GO:0034757 GO:GO:0034698 Uniprot:Q62878
Length = 373
Score = 160 (61.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 71/243 (29%), Positives = 107/243 (44%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ E+ LDK+ + + S L+GDI
Sbjct: 7 LVTGAGGFLGQRIVQLLVQEKDLKEVRVLDKVFRPETREEFFNLGTSIKVTVLEGDIL-- 64
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
D +GI ++H AA V + N+ GT LLEAC + V FI+
Sbjct: 65 DTQCLRRACQGISVVIHTAALIDV-TGVNPRQTILDVNLKGTQNLLEAC-VQASVPAFIY 122
Query: 136 VSTDEVYGETDMESDIGN---PEASQLLPTNPYSATKAGAEMLVMAYHRSY----G-LPT 187
ST +V G + I N E + +NPY +K AE V+A + S G L T
Sbjct: 123 CSTVDVAGPNSYKKIILNGHEEEHHESTWSNPYPYSKKMAEKAVLAANGSILKNGGTLHT 182
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVILH 246
R +YG P + IL A+K + L + G S + + +Y +VA A ++
Sbjct: 183 CALRPMYIYGERS-P--FLSVMILAALKSKGILNVTGKFS-IANPVYVGNVAWAH-ILAA 237
Query: 247 RGV 249
RG+
Sbjct: 238 RGL 240
Score = 55 (24.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 283 IHYVQD-RP-FNDHRYFLDDQKL----KR----LGWKEKTPWEEGLKLTLEW 324
+H V + RP FN H L + K K+ LG+K WEE + T EW
Sbjct: 305 LHPVYNYRPSFNRHLVTLSNSKFTFSYKKAQRDLGYKPLVSWEEAKQKTSEW 356
>MGI|MGI:96234 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96234 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 CTD:3284 EMBL:AL606755 EMBL:BC026757 EMBL:BC040397
EMBL:M75886 IPI:IPI00230105 RefSeq:NP_694873.2 UniGene:Mm.482364
ProteinModelPortal:P26149 SMR:P26149 STRING:P26149
PhosphoSite:P26149 PaxDb:P26149 PRIDE:P26149
Ensembl:ENSMUST00000107021 Ensembl:ENSMUST00000107022
Ensembl:ENSMUST00000177651 GeneID:15493 KEGG:mmu:15493
GeneTree:ENSGT00550000074557 InParanoid:B1ARN7 OMA:HEEECHE
NextBio:288370 Bgee:P26149 Genevestigator:P26149
GermOnline:ENSMUSG00000063730 Uniprot:P26149
Length = 373
Score = 164 (62.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 70/243 (28%), Positives = 107/243 (44%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ EI LDK+ + K S L+GDI
Sbjct: 7 LVTGAGGFLGQRIIQLLVQEEDLEEIRVLDKVFRPETRKEFFNLETSIKVTVLEGDIL-- 64
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
D +GI ++H AA V + N+ GT LLEAC + V FI
Sbjct: 65 DTQYLRRACQGISVVIHTAAIIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAFIF 122
Query: 136 VSTDEVYGETDMESDIGN---PEASQLLPTNPYSATKAGAEMLVMAYHRSY----G-LPT 187
S+ +V G + + N E + ++PY +K AE V+A + S G L T
Sbjct: 123 SSSVDVAGPNSYKEIVLNGHEEECHESTWSDPYPYSKKMAEKAVLAANGSMLKNGGTLQT 182
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS-NVRSYLYCADVAEAFDVILH 246
R +YG P LI I++A+K + + + G N + +Y +VA A ++
Sbjct: 183 CALRPMCIYGERS-P--LISNIIIMALKHKGI-LRSFGKFNTANPVYVGNVAWAH-ILAA 237
Query: 247 RGV 249
RG+
Sbjct: 238 RGL 240
Score = 50 (22.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 290 PFNDHRYFLDD-------QKLKR-LGWKEKTPWEEGLKLTLEW 324
PFN H L +K +R LG++ WEE + T EW
Sbjct: 314 PFNRHLVTLSGSTFTFSYKKAQRDLGYEPLVSWEEAKQKTSEW 356
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 89/334 (26%), Positives = 147/334 (44%)
Query: 11 KPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
KP+KI L+TG G GS++T L+ K Y + ++ L +++ + N +
Sbjct: 14 KPRKIALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNVNKALM 73
Query: 69 K---GDITCAD-LMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIY-GTHVLLEA 123
K GD++ A L +L V + D + + AAQ+HV SF ++T + + G LLEA
Sbjct: 74 KLHYGDLSDASSLRRWLDVIKP-DEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEA 131
Query: 124 CKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAY 179
+ G+ ++ + E++G T E + P +PY+A+K A + Y
Sbjct: 132 VRSHNIDNGRAIKYYQAGSSEMFGSTPPPQS----ETTPFHPRSPYAASKCAAHWYTVNY 187
Query: 180 HRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMK----GQQLPIH-GNGSNVRSYLYC 234
+YGL N P + E + + I A+ G Q + GN R + +
Sbjct: 188 REAYGLYACNGILFNHESPRR-GENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFA 246
Query: 235 ADVAEAFDVILHRGVIGHVYNVGTKKERSV---LDVAADICTL-FKLEPEKTIHYVQDRP 290
D EA ++L + Y V T++ +V LDV+ L +K E Y RP
Sbjct: 247 GDYVEAMWLMLQQEKPDD-YVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYF--RP 303
Query: 291 FNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLE 323
D K K LGWK K +E+ +K+ ++
Sbjct: 304 TEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVD 337
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 117 (46.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 45/171 (26%), Positives = 73/171 (42%)
Query: 13 KKILITGAAGFIGSHVTNRLIKN--YP----DYEIVALDKLDYCSSLKNLHPSRASPNFK 66
+KIL+TG G+IGSH LI+ +P ++ + D SL+ + + +
Sbjct: 3 QKILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDT-QIE 61
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
F + D+ + + +MHFA V S + N+ GT LLE +
Sbjct: 62 FHELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQS 121
Query: 127 TGQVKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNPYSATKAGAEMLV 176
G V+ + S+ VYG+ + D +P TNPY TK E ++
Sbjct: 122 HG-VRNLVFSSSATVYGDPQKLPIDEQHPVGGC---TNPYGKTKYFIEEMI 168
Score = 100 (40.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 38/144 (26%), Positives = 60/144 (41%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEAFDVILHR--G 248
P P L+P +A+ + + L + GN G+ VR Y++ D+A+ + +
Sbjct: 201 PQGIPNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTGVRDYIHVVDLAKGHIAAVRKLKD 260
Query: 249 VIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL--KR 305
G VYN+GT SVL + + + K K + + R D D L K
Sbjct: 261 SCGCKVYNLGTGTGYSVLQM---VSAMEKASGRKIAYQIAPRRSGDVASCYADASLAEKE 317
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNP 329
LGWK + E + W +NP
Sbjct: 318 LGWKAEFDLERMCEDLWRWQSQNP 341
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 163 (62.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSS-LKNLHPSRASPNFK--FLKGD 71
+L+TG AG+IGSH L++ Y++V +D L C+S ++ +H K F + D
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEK--GYDVVIVDNL--CNSRVEAVHRIEKLTGKKVIFHQVD 64
Query: 72 ITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
+ ++ + ++ I ++HFA V S + NNI GT L+E C V+
Sbjct: 65 LLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIE-CMKKYNVR 123
Query: 132 RFIHVSTDEVYGE-TDMESDIGNPEASQLLPTNPYSATKAGAEMLV 176
F+ S+ VYG+ T I PE+ T+PY TK E ++
Sbjct: 124 DFVFSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENII 169
Score = 50 (22.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 20/81 (24%), Positives = 36/81 (44%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEA----FDVILH 246
P P L+P +A+ + L + G+ G+ +R Y++ D+AEA D +
Sbjct: 202 PLGIPNNLLPYIAQVAVGRLDHLNVFGDDYPTSDGTPIRDYIHVCDLAEAHVAALDYLRQ 261
Query: 247 RGVIGHVYNVGTKKERSVLDV 267
V +N+G+ +V V
Sbjct: 262 HFVSCRPWNLGSGTGSTVFQV 282
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 81/290 (27%), Positives = 131/290 (45%)
Query: 11 KPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P-SRASPNF 65
KP+K+ LITG G GS++ L+ K Y + IV +++L+ P + N
Sbjct: 21 KPRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNM 80
Query: 66 KFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEA 123
K GD+T + + +++E T I + AQ+HV SF + E+T + + GT LL+A
Sbjct: 81 KLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDA 138
Query: 124 CKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHR 181
K G + +F ST E+YG+ +I E + P +PY A K A +V+ +
Sbjct: 139 IKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 182 SYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADV 237
+Y L + N P + F + I + + GQ + GN R + + D
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 238 AEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
EA ++L VI G V++V E+S + + I K E E
Sbjct: 256 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENE 305
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 123 (48.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 45/173 (26%), Positives = 72/173 (41%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--------SSLKNLHPSRASPN 64
+K+L+TG AG+IGSH L++ Y + +D SL+ + +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPMVIDNFHNAIRGGGSMPESLRRVQ-DLTGRS 59
Query: 65 FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
+F + DI + L ++HFA V S ++ N+ GT LLE
Sbjct: 60 VEFEEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 125 KLTGQVKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNPYSATKAGAEMLV 176
+ G VK + S+ VYG + D +P TNPY +K E ++
Sbjct: 120 RAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC---TNPYGKSKFFIEEMI 168
Score = 92 (37.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/148 (26%), Positives = 62/148 (41%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEAFDVILHR--G 248
P P L+P +A+ + + L + GN G+ VR Y++ D+A+ L +
Sbjct: 201 PQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE 260
Query: 249 VIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHR--YFLDDQKLKR 305
G +YN+GT SVL + + + K +K + V R D Y LK
Sbjct: 261 QCGCRIYNLGTGTGYSVLQM---VQAMEKASGKKIPYKVVARREGDVAACYANPSLALKE 317
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
LGW + + W K+NP +G
Sbjct: 318 LGWSAALGLDRMCEDLWRWQKQNPSGFG 345
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/180 (31%), Positives = 85/180 (47%)
Query: 13 KKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK- 69
KK+ LITG G GS++ L+ K Y + I + +++ N KF
Sbjct: 4 KKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLH 63
Query: 70 -GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLT 127
GD+T + + +L D + + AQ+HV SF E+T + + GT LLEA +
Sbjct: 64 YGDLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSF-ECPEYTADVDAIGTLRLLEAIRFL 122
Query: 128 GQVKR--FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 185
G K+ F ST E+YGE +I E + P +PY+ K A +V+ Y SYG+
Sbjct: 123 GLEKKTKFYQASTSELYGEVQ---EIPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYGM 179
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 167 (63.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 84/299 (28%), Positives = 134/299 (44%)
Query: 2 SGEFEPASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH-- 57
SG+ E KP+ + LITG G GS++ L+ K Y + IV +++L+
Sbjct: 14 SGDGEMG--KPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN 71
Query: 58 P-SRASPNFKFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NI 114
P + N K GD+T + + +++E T I + AQ+HV SF + E+T + +
Sbjct: 72 PQAHIEGNMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDG 129
Query: 115 YGTHVLLEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172
GT LL+A K G + +F ST E+YG+ +I E + P +PY A K A
Sbjct: 130 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYA 186
Query: 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNV 228
+V+ + +Y L + N P + F + I + + GQ + GN
Sbjct: 187 YWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK 246
Query: 229 RSYLYCADVAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
R + + D EA ++L VI G V++V E+S L + I K E E
Sbjct: 247 RDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE 305
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 126 (49.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 45/172 (26%), Positives = 70/172 (40%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR-------ASPNF 65
+K+L+TG AG+IGSH L++ Y V +D K P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSV 60
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
+F + DI + L ++HFA V S ++ N+ G+ LLE +
Sbjct: 61 EFEEMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMR 120
Query: 126 LTGQVKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNPYSATKAGAEMLV 176
G VK + S+ VYG + D +P TNPY +K E ++
Sbjct: 121 AHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC---TNPYGKSKYFIEEMI 168
Score = 86 (35.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 38/148 (25%), Positives = 61/148 (41%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEAFDVILHR--G 248
P P L+P +A+ + + L + GN G+ VR Y++ D+A+ L +
Sbjct: 201 PQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE 260
Query: 249 VIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHR--YFLDDQKLKR 305
G +YN+GT SVL + + K ++ + V R D Y LK
Sbjct: 261 QCGCRIYNLGTGTGYSVLQMVE---AMKKASGQEIPYKVVARREGDVAACYANPSLALKE 317
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
LGW + + W K+NP +G
Sbjct: 318 LGWTAVLGLDRMCEDLWRWQKQNPSGFG 345
>RGD|1308676 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISO;IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISO;IDA] [GO:0005496 "steroid binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006082 "organic
acid metabolic process" evidence=IEP] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISO] [GO:0006701 "progesterone
biosynthetic process" evidence=IEP;IDA] [GO:0006703 "estrogen
biosynthetic process" evidence=IEP] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0008207 "C21-steroid hormone metabolic
process" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0008585 "female gonad development" evidence=IEP]
[GO:0009635 "response to herbicide" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0010038 "response
to metal ion" evidence=IEP] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0010288 "response to lead ion" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0014823 "response to activity" evidence=IEP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016101 "diterpenoid
metabolic process" evidence=IEP] [GO:0017143 "insecticide metabolic
process" evidence=IEP] [GO:0018879 "biphenyl metabolic process"
evidence=IEP] [GO:0018894 "dibenzo-p-dioxin metabolic process"
evidence=IEP] [GO:0018958 "phenol-containing compound metabolic
process" evidence=IEP] [GO:0018970 "toluene metabolic process"
evidence=IEP] [GO:0021766 "hippocampus development" evidence=IEP]
[GO:0030061 "mitochondrial crista" evidence=IDA] [GO:0030325
"adrenal gland development" evidence=IEP] [GO:0030728 "ovulation"
evidence=IEP] [GO:0030851 "granulocyte differentiation"
evidence=IEP] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0033197 "response to vitamin E" evidence=IEP]
[GO:0033327 "Leydig cell differentiation" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0035410
"dihydrotestosterone 17-beta-dehydrogenase activity" evidence=IDA]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046470 "phosphatidylcholine metabolic process" evidence=IEP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0050756 "fractalkine metabolic process" evidence=IEP]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] [GO:0051592 "response to
calcium ion" evidence=IEP] [GO:0060135 "maternal process involved
in female pregnancy" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0061370 "testosterone biosynthetic
process" evidence=IEP] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEP] [GO:0070542 "response to fatty acid"
evidence=IEP] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IEP] [GO:0071320 "cellular response to cAMP" evidence=IEP]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0071371 "cellular response to gonadotropin stimulus"
evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071373
"cellular response to luteinizing hormone stimulus" evidence=IEP]
[GO:0071406 "cellular response to methylmercury" evidence=IEP]
[GO:0071549 "cellular response to dexamethasone stimulus"
evidence=IEP] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEP] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:1308676 GO:GO:0016021
GO:GO:0046686 GO:GO:0021766 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0004769 GO:GO:0006703 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:M38178 EMBL:BC086578 EMBL:DQ515797 IPI:IPI00362470 PIR:A39051
RefSeq:NP_001007720.3 UniGene:Rn.128814 ProteinModelPortal:P22071
STRING:P22071 Ensembl:ENSRNOT00000026325 GeneID:360348
KEGG:rno:360348 UCSC:RGD:1308676 InParanoid:P22071 OMA:WVFPRIA
BRENDA:5.3.3.1 NextBio:672781 ArrayExpress:P22071
Genevestigator:P22071 GermOnline:ENSRNOG00000019454 GO:GO:0030061
GO:GO:0035410 GO:GO:0051287 GO:GO:0005496 GO:GO:0030325
GO:GO:0018879 GO:GO:0071236 GO:GO:0071320 GO:GO:0071549
GO:GO:0044344 GO:GO:0071372 GO:GO:0071333 GO:GO:0070301
GO:GO:0032869 GO:GO:0071373 GO:GO:0071288 GO:GO:0071406
GO:GO:0071560 GO:GO:0018894 GO:GO:0016101 GO:GO:0008585
GO:GO:0050756 GO:GO:0030851 GO:GO:0017143 GO:GO:0033327
GO:GO:0060135 GO:GO:0006082 GO:GO:0030728 GO:GO:0018958
GO:GO:0046470 GO:GO:0006701 GO:GO:0014823 GO:GO:0043279
GO:GO:0046685 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0032355 GO:GO:0045471 GO:GO:0070542 GO:GO:0060992
GO:GO:0009635 GO:GO:0033591 GO:GO:0010288 GO:GO:0010226
GO:GO:0033197 GO:GO:0061370 GO:GO:0018970 Uniprot:P22071
Length = 373
Score = 161 (61.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 68/243 (27%), Positives = 109/243 (44%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ E+ ALDK+ + + + L+GDI A
Sbjct: 7 LVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLEGDILDA 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +GI ++H AA V + + N+ GT +LEAC + V FI+
Sbjct: 67 QYLRR--ACQGISVVIHTAAVIDVSHVLPRQ-TILDVNLKGTQNILEAC-VEASVPAFIY 122
Query: 136 VSTDEVYGETDMESDIGN---PEASQLLPTNPYSATKAGAEMLVMAYHRSY----G-LPT 187
ST +V G + I N E + ++ Y +K AE V+A + S G L T
Sbjct: 123 CSTVDVAGPNSYKKIILNGHEEEHHESTWSDAYPYSKRMAEKAVLAANGSILKNGGTLHT 182
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVILH 246
R +YG P + IL A+K + L + G S + + +Y +VA A ++
Sbjct: 183 CALRPMYIYGERS-P--FLSVMILAALKNKGILNVTGKFS-IANPVYVGNVAWAH-ILAA 237
Query: 247 RGV 249
RG+
Sbjct: 238 RGL 240
Score = 49 (22.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 290 PFNDHRYFLDDQKL----KR----LGWKEKTPWEEGLKLTLEW 324
PFN H L + K K+ LG+ WEE + T EW
Sbjct: 314 PFNCHLVTLSNSKFTFSYKKAQRDLGYVPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 169 (64.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 71/251 (28%), Positives = 116/251 (46%)
Query: 8 ASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P-SRAS 62
+S KP+K+ LITG G GS++ L+ K Y + IV +++L+ P +
Sbjct: 15 SSGKPRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHTE 74
Query: 63 PNFKFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVL 120
N K GD+T + + +++E T I + AQ+HV SF + E+T + + GT L
Sbjct: 75 GNMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGLGTLRL 132
Query: 121 LEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMA 178
L+A K G + +F ST E+YG+ +I E + P +PY A K A +V+
Sbjct: 133 LDATKTCGLINTVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVN 189
Query: 179 YHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYC 234
+ +Y L + N P + F + I + + GQ GN R + +
Sbjct: 190 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMESFSLGNLDAKRDWGHA 249
Query: 235 ADVAEAFDVIL 245
D EA ++L
Sbjct: 250 KDYVEAMWLML 260
Score = 39 (18.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 301 QKLKRLGWKEKTPWEEGLKLTLE 323
Q +LGW K ++E +K +E
Sbjct: 335 QAKNKLGWTPKVSFDELVKEMVE 357
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 165 (63.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 80/328 (24%), Positives = 133/328 (40%)
Query: 11 KPKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--PSRASPNFKF 67
K K +L+TG G GS+++ L+ K Y + I+ + +L+ P +
Sbjct: 3 KSKVVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRL 62
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNI-YGTHVLLEACK- 125
GD+T + +L I + AQ+HV SF +S E+T +++ GT LLEA +
Sbjct: 63 HYGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSF-DSPEYTVDSVAMGTLRLLEAIRD 121
Query: 126 ---LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRS 182
TG RF + E++G+ +I E + P +PY+ K + Y S
Sbjct: 122 YQHRTGIQVRFYQAGSSEMFGKVQ---EIPQKETTPFYPRSPYACAKVYGHWQTVNYRES 178
Query: 183 YGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVA 238
Y L N P + F + I + I + G Q ++ GN + R + Y D
Sbjct: 179 YDLFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYV 238
Query: 239 EAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQD--RPFNDHRY 296
A +L + Y V T + V + L + + + + RP
Sbjct: 239 RAMWAMLQQEQPDD-YVVATGETHEVKEFLEIAFGYVNLNWQNYVAFDERYLRPAEVDLL 297
Query: 297 FLDDQKLK-RLGWKEKTPWEEGLKLTLE 323
D K K +LGW+ + E + L +E
Sbjct: 298 IGDPAKTKAQLGWEPSVTFTELVHLMVE 325
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 165 (63.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 83/299 (27%), Positives = 134/299 (44%)
Query: 2 SGEFEPASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH-- 57
SG+ E KP+ + LITG G GS++ L+ K Y + IV +++L+
Sbjct: 14 SGDGEMG--KPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN 71
Query: 58 P-SRASPNFKFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NI 114
P + N K GD+T + + +++E T I + AQ+HV SF + E+T + +
Sbjct: 72 PQAHIEGNMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDG 129
Query: 115 YGTHVLLEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172
GT LL+A K G + +F ST E+YG+ +I E + P +PY A K A
Sbjct: 130 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYA 186
Query: 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNV 228
+V+ + +Y L + N P + F + I + + GQ + GN
Sbjct: 187 YWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK 246
Query: 229 RSYLYCADVAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
R + + D EA ++L VI G V++V E+S + + I K E E
Sbjct: 247 RDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENE 305
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 161 (61.7 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 68/276 (24%), Positives = 126/276 (45%)
Query: 71 DITC-ADLMNYLLVSEGIDTIMHFA--AQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
D+T +D+ ++ + + I+ A H +N++ F N I T+V+ A T
Sbjct: 56 DLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQ-TNVIHSA--YT 112
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLL----PTNP-YSATKAGAEMLVMAYHRS 182
VK+ + + + +Y + + PE++ L PTN Y+ K + AY
Sbjct: 113 HGVKKLLFLGSSCIYPKFAPQPI---PESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQ 169
Query: 183 YGLPTITTRGNNVYGPNQ-F-PEK--LIPKFI-----LLAMKGQQLPIHGNGSNVRSYLY 233
+ I+ N+YG N F PE ++P + A ++ + G+GS +R +L+
Sbjct: 170 HQWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLH 229
Query: 234 CADVAEAFDVILHR-GVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFN 292
D+A+A ++ + HV NVG+ E ++ ++A + + + + + + +P
Sbjct: 230 VDDLADACVFLMDQYSGFEHV-NVGSGVEVTIKELAELVKEVVGFKGK--LVWDTTKPDG 286
Query: 293 DHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKN 328
R +D KL LGW K ++GL T EWY +N
Sbjct: 287 TPRKLMDSSKLASLGWTPKISLKDGLSQTYEWYLEN 322
Score = 44 (20.5 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 11 KPKKILITGAAGFIGSHVTNRL 32
K KI + G G +GS + +L
Sbjct: 18 KSAKIFVAGHRGLVGSAIVRKL 39
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 167 (63.8 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 84/299 (28%), Positives = 134/299 (44%)
Query: 2 SGEFEPASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH-- 57
SG+ E KP+ + LITG G GS++ L+ K Y + IV +++L+
Sbjct: 14 SGDGEMG--KPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN 71
Query: 58 P-SRASPNFKFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NI 114
P + N K GD+T + + +++E T I + AQ+HV SF + E+T + +
Sbjct: 72 PQAHIEGNMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDG 129
Query: 115 YGTHVLLEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172
GT LL+A K G + +F ST E+YG+ +I E + P +PY A K A
Sbjct: 130 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYA 186
Query: 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNV 228
+V+ + +Y L + N P + F + I + + GQ + GN
Sbjct: 187 YWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK 246
Query: 229 RSYLYCADVAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
R + + D EA ++L VI G V++V E+S L + I K E E
Sbjct: 247 RDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE 305
Score = 40 (19.1 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 299 DDQKLK-RLGWKEKTPWEE 316
D K K +L WK + P++E
Sbjct: 335 DCTKAKQKLNWKPRVPFDE 353
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 164 (62.8 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 67/263 (25%), Positives = 118/263 (44%)
Query: 1 MSGEFEPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR 60
+ G E Y PK +L+TGA F+G ++T RL +N ++A+D + + K++ R
Sbjct: 13 VGGSSEHPQY-PKVVLVTGACRFLGGYLTARLAQNPLINRVIAVDAI---APSKDM--LR 66
Query: 61 ASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVL 120
+F++ DI + + E +DT++H AA ++ S G S N+ G L
Sbjct: 67 RMGRAEFVRADIRNPFIAKVIRNGE-VDTVVHAAAASYAPRS-GGSAALKELNVMGAMQL 124
Query: 121 LEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYH 180
AC+ V+R + ST EVYG + + + ++S P+S + + Y
Sbjct: 125 FAACQKAPSVRRVVLKSTSEVYGSSPHDPVMFTEDSSS---RRPFSQGFPKDSLDIEGYV 181
Query: 181 RSYGL--PTITT---RGNNVYGPNQFPEKLIPKFILLAMKGQQLP-IHGNGSNVRSYLYC 234
R+ G P I R N+ GP + + +++ G +P I G + ++ L+
Sbjct: 182 RALGRRRPDIAVTILRLANMIGPAM--DTTLSRYLA----GPLVPTIFGRDARLQ-LLHE 234
Query: 235 ADVAEAFDVILHRGVIGHVYNVG 257
D A + G G +N+G
Sbjct: 235 QDALGALERAAMAGKAG-TFNIG 256
>UNIPROTKB|Q9KV94 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237
GO:GO:0003978 GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS
PIR:D82345 RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94
DNASU:2614880 GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 162 (62.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 84/337 (24%), Positives = 142/337 (42%)
Query: 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF 65
EP + P KIL+TGA+GF+G V + +N Y +VA + S+ +F
Sbjct: 2 EPDNQTPLKILVTGASGFVGLRVLTQA-QNI-GYALVAQSR------------SQQPYSF 47
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTH-VDNSFGNSFE-FTNNNIYGTHVLLEA 123
+ + DIT LV G+D ++H AA+ H + + ++ + + + N GT L +
Sbjct: 48 EQVLLDITPNTDWERALV--GVDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQ 105
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
G VKRFI +S+ +V GE + Q +P++PY +K AE ++
Sbjct: 106 AVSAG-VKRFIFLSSIKVNGEQTKAGSAFQHD-DQHIPSDPYGLSKYEAEQQLLELAAET 163
Query: 184 GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDV 243
GL + R VYG L + K LP+ G N+RS +Y ++ + V
Sbjct: 164 GLEVVIIRPPLVYGEGVKANFL--SMMNWVKKQIPLPLGAVG-NMRSLVYLDNLVDLILV 220
Query: 244 IL-HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPE---------KTIHYVQDRPFND 293
H G ++ V + S+ + I ++ P + + + +P
Sbjct: 221 CCQHPKAAGEIFLVSDNHDVSLTTLLRTIAQAMQIRPRLLPIPQTGLQWLLRLLGKPELG 280
Query: 294 HRYF----LD-DQKLKRLGWKEKTPWEEGLKLTLEWY 325
R LD K L W +E+G+ T+ +Y
Sbjct: 281 QRLCGNLQLDIAHTQKTLHWSPPVSFEQGIARTVNFY 317
>TIGR_CMR|VC_0262 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS PIR:D82345
RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94 DNASU:2614880
GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 162 (62.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 84/337 (24%), Positives = 142/337 (42%)
Query: 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF 65
EP + P KIL+TGA+GF+G V + +N Y +VA + S+ +F
Sbjct: 2 EPDNQTPLKILVTGASGFVGLRVLTQA-QNI-GYALVAQSR------------SQQPYSF 47
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTH-VDNSFGNSFE-FTNNNIYGTHVLLEA 123
+ + DIT LV G+D ++H AA+ H + + ++ + + + N GT L +
Sbjct: 48 EQVLLDITPNTDWERALV--GVDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQ 105
Query: 124 CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 183
G VKRFI +S+ +V GE + Q +P++PY +K AE ++
Sbjct: 106 AVSAG-VKRFIFLSSIKVNGEQTKAGSAFQHD-DQHIPSDPYGLSKYEAEQQLLELAAET 163
Query: 184 GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDV 243
GL + R VYG L + K LP+ G N+RS +Y ++ + V
Sbjct: 164 GLEVVIIRPPLVYGEGVKANFL--SMMNWVKKQIPLPLGAVG-NMRSLVYLDNLVDLILV 220
Query: 244 IL-HRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPE---------KTIHYVQDRPFND 293
H G ++ V + S+ + I ++ P + + + +P
Sbjct: 221 CCQHPKAAGEIFLVSDNHDVSLTTLLRTIAQAMQIRPRLLPIPQTGLQWLLRLLGKPELG 280
Query: 294 HRYF----LD-DQKLKRLGWKEKTPWEEGLKLTLEWY 325
R LD K L W +E+G+ T+ +Y
Sbjct: 281 QRLCGNLQLDIAHTQKTLHWSPPVSFEQGIARTVNFY 317
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 162 (62.1 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 77/298 (25%), Positives = 134/298 (44%)
Query: 9 SYKPKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPS----RASP 63
S + K LITG G GS++T LI K Y + I+ + + +KN++ +
Sbjct: 2 SEERKVALITGITGQDGSYLTEFLISKGYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKE 61
Query: 64 NFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLE 122
+ GD+T A ++ ++ I + AQ+HV SF S E+T + + G LL+
Sbjct: 62 SLTLHYGDLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSFDMS-EYTGDVDGLGCLRLLD 120
Query: 123 ACKLTGQVKR--FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYH 180
A + G K+ + ST E+YG+ +I E + P +PY+ K A +V+ Y
Sbjct: 121 AIRSCGMEKKVKYYQASTSELYGKVQ---EIPQSETTPFYPRSPYAVAKQYAYWIVVNYR 177
Query: 181 RSYGLPTITTRGNNVYGPNQFPE---KLIPKFIL-LAMKGQQLPIHGNGSNVRSYLYCAD 236
+Y + N P + P + I +F+ +A ++ GN + R + + D
Sbjct: 178 EAYDMYACNGILFNHESPRRGPTFVTRKITRFVAGIACGRDEILYLGNINAKRDWGHARD 237
Query: 237 VAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQ 287
EA ++L + VI G ++V E+S ++ DI ++ E EK Y +
Sbjct: 238 YVEAMWLMLQQEKPEDFVIATGETHSVREFVEKSFKEI--DIIIKWRGEAEKEEGYCE 293
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 130 (50.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/173 (26%), Positives = 73/173 (42%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--------SSLKNLHPSRASPN 64
+K+L+TG AG+IGSH L++ Y V +D SL+ + +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNSIRGEDSMPESLRRVQ-ELTGRS 59
Query: 65 FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
+F + DI + +L ++HFA V S ++ N+ GT LLE
Sbjct: 60 VEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 125 KLTGQVKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNPYSATKAGAEMLV 176
+ G VK + S+ VYG + D +P TNPY +K E ++
Sbjct: 120 RAHG-VKSLVFSSSATVYGNPQYLPLDEAHPTGGC---TNPYGKSKFFIEEMI 168
Score = 77 (32.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 36/148 (24%), Positives = 62/148 (41%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEAFDVILHR--G 248
P P L+P +A+ + + L + G+ G+ VR Y++ D+A+ L +
Sbjct: 201 PQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKE 260
Query: 249 VIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL--KR 305
G +YN+GT SVL + + + K +K + V R D + L +
Sbjct: 261 QCGCRIYNLGTGTGYSVLQM---VQAMEKASGKKIPYKVVARREGDVAACYANPSLAHEE 317
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
LGW + + W K+NP +G
Sbjct: 318 LGWTAALGLDRMCEDLWRWQKQNPSGFG 345
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 82/298 (27%), Positives = 132/298 (44%)
Query: 2 SGEFEPASYKPKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P 58
SG+ E + K LITG G GS++ L+ K Y + IV +++L+ P
Sbjct: 14 SGDGEMGKLR-KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP 72
Query: 59 -SRASPNFKFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIY 115
+ N K GD+T + + +++E T I + AQ+HV SF + E+T + +
Sbjct: 73 QAHIEGNMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGV 130
Query: 116 GTHVLLEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173
GT LL+A K G + +F ST E+YG+ +I E + P +PY A K A
Sbjct: 131 GTLRLLDAIKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAY 187
Query: 174 MLVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVR 229
+V+ + +Y L + N P + F + I + + GQ + GN R
Sbjct: 188 WIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR 247
Query: 230 SYLYCADVAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
+ + D EA ++L VI G V++V E+S + + I K E E
Sbjct: 248 DWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENE 305
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 82/298 (27%), Positives = 132/298 (44%)
Query: 2 SGEFEPASYKPKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P 58
SG+ E + K LITG G GS++ L+ K Y + IV +++L+ P
Sbjct: 14 SGDGEMGKLR-KVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP 72
Query: 59 -SRASPNFKFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIY 115
+ N K GD+T + + +++E T I + AQ+HV SF + E+T + +
Sbjct: 73 QAHIEGNMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGV 130
Query: 116 GTHVLLEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAE 173
GT LL+A K G + +F ST E+YG+ +I E + P +PY A K A
Sbjct: 131 GTLRLLDAIKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAY 187
Query: 174 MLVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVR 229
+V+ + +Y L + N P + F + I + + GQ + GN R
Sbjct: 188 WIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR 247
Query: 230 SYLYCADVAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
+ + D EA ++L VI G V++V E+S + + I K E E
Sbjct: 248 DWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENE 305
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/236 (26%), Positives = 105/236 (44%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-H----PSRASPNFKF 67
K LITG G GS++ L++ YE+ + + + + + H P +P F
Sbjct: 3 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL 60
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKL 126
GD++ + +L D + + A +HV SF S E+T + + GT LLEA +
Sbjct: 61 HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSF-ESPEYTADVDAMGTLRLLEAIRF 119
Query: 127 TGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
G K RF ST E+YG + +I E + P +PY+ K A + + Y SYG
Sbjct: 120 LGLEKKTRFYQASTSELYG---LVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG 176
Query: 185 LPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCAD 236
+ N P + F + I + I +G + ++ GN ++R + + D
Sbjct: 177 MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 232
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 132 (51.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 46/173 (26%), Positives = 73/173 (42%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYC--------SSLKNLHPSRASPN 64
+K+L+TG AG+IGSH L++ Y V +D SL+ + +
Sbjct: 2 EKVLVTGGAGYIGSHTVLELLE--AGYSPVVIDNFHNAIRGEDSMPESLRRVQ-ELTGRS 58
Query: 65 FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 124
+F + DI + +L ++HFA V S ++ N+ GT LLE
Sbjct: 59 VEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 118
Query: 125 KLTGQVKRFIHVSTDEVYGETD-MESDIGNPEASQLLPTNPYSATKAGAEMLV 176
+ G VK + S+ VYG + D +P TNPY +K E ++
Sbjct: 119 RAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGC---TNPYGKSKFFIEEMI 167
Score = 74 (31.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 198 PNQFPEKLIPKFILLAM-KGQQLPIHGN------GSNVRSYLYCADVAEAFDVILHR--G 248
P P L+P +A+ + + L + G+ G+ VR Y++ D+A+ L +
Sbjct: 200 PQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKE 259
Query: 249 VIG-HVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKL--KR 305
G YN+GT SVL + + + K +K + V R D + L +
Sbjct: 260 QCGCRTYNLGTGTGYSVLQM---VQAMEKASGKKIPYKVVARREGDVAACYANPSLAHEE 316
Query: 306 LGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
LGW + + W K+NP +G
Sbjct: 317 LGWTAALGLDRMCEDLWRWQKQNPSGFG 344
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 68/252 (26%), Positives = 107/252 (42%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
+I G GF+G+HV + L K I+ +D K + ++ N ++K
Sbjct: 5 VIVGGGGFLGAHVISALQKIGCKERIIVVDPCP--QEFKTIKIDKS--NISYIKASFLDD 60
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
++ +L G ++H AA H G+ N N+ GT L++ CK G VKRF++
Sbjct: 61 KVLENIL--NGASAVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALG-VKRFLY 117
Query: 136 VSTDEV--YGET--DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTR 191
S+ V GE ++ D P+ + L YSA+KA AE V++ + T+ R
Sbjct: 118 ASSVAVSFIGEPLDNVTEDDPLPDPKKYLDF--YSASKAEAETYVLS-QSTPDFKTVCLR 174
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQ---QLPIHGNGSN--VRSYLYCADVAEAFDVILH 246
+YGP P + K L G + HG S S + CA D +L
Sbjct: 175 FRGIYGPED-PNVTL-KVANLIKNGLFIGMVSAHGRESVSCASSGVNCAKAFALADQMLQ 232
Query: 247 R--GVIGHVYNV 256
G+ G Y +
Sbjct: 233 NPDGLHGRAYYI 244
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 81/299 (27%), Positives = 133/299 (44%)
Query: 2 SGEFEPASYKPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH-- 57
SG + K +K+ LITG G GS++ L+ K Y + IV +++L+
Sbjct: 23 SGSPSNGAGKSRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN 82
Query: 58 P-SRASPNFKFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NI 114
P + N K GD+T + + +++E T I + AQ+HV SF + E+T + +
Sbjct: 83 PHAHIEGNMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDG 140
Query: 115 YGTHVLLEACKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGA 172
GT LL+A K G + +F ST E+YG+ +I E + P +PY A K A
Sbjct: 141 LGTLRLLDATKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYA 197
Query: 173 EMLVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNV 228
+V+ + +Y L + N P + F + I + + GQ + GN
Sbjct: 198 YWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMEFVSLGNLDAK 257
Query: 229 RSYLYCADVAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
R + + D EA ++L VI G V++V E++ + + I K E E
Sbjct: 258 RDWGHAKDYVEAMWLMLQTDEPEDFVISTGEVHSVREFVEKAFMHIGKTIVWEGKNENE 316
>TIGR_CMR|SO_3173 [details] [associations]
symbol:SO_3173 "UDP-galactose 4-epimerase, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 HOGENOM:HOG000167991
RefSeq:NP_718729.1 ProteinModelPortal:Q8ECG9 GeneID:1170867
KEGG:son:SO_3173 PATRIC:23526030 OMA:HAMSGAP Uniprot:Q8ECG9
Length = 309
Score = 145 (56.1 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 56/205 (27%), Positives = 88/205 (42%)
Query: 67 FLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE--FTNNNIYGTHVLLEAC 124
F G++T +Y G+D ++H AA+ HV N N+ + N T L E
Sbjct: 41 FFAGELTANT--DYRSALSGVDVVIHCAARAHVMNETANNAAQLYQEVNTLVTLALAEQA 98
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNP-EASQLLPTNPYSATKAGAEMLVMAYHRSY 183
G VKRFI +ST +V GE + + +A Q P + Y +KA AE+ + R
Sbjct: 99 AAAG-VKRFIFISTIKVNGEATIAGQLFRASDARQ--PLDHYGESKAKAEIGLFDIARKT 155
Query: 184 GLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAF-D 242
+ + R VYGPN + + LA K LP G N RS + ++ +
Sbjct: 156 EIEVVIIRPPLVYGPNV--KANFATMLNLAKKNLPLPF-GAIHNKRSMVALDNLVDLIVT 212
Query: 243 VILHRGVIGHVYNVGTKKERSVLDV 267
I H ++ V ++ S ++
Sbjct: 213 CIEHPNAANQIFLVSDDQDVSTTEL 237
Score = 54 (24.1 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 13 KKILITGAAGFIGSHVTNRL 32
+ IL+TGA GF+G + +L
Sbjct: 4 QSILLTGATGFVGQQILRQL 23
Score = 37 (18.1 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 570 NKVVNIPNSMTVLDEMLPIAIEMARRNC 597
N V+I ++ L PI +E R C
Sbjct: 278 NLQVDITHTKNTLSWQPPITVEEGVRRC 305
>MGI|MGI:96233 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96233 GO:GO:0016021 GO:GO:0005739
CTD:3283 eggNOG:COG0451 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 EMBL:M58567
EMBL:BC052659 IPI:IPI00229070 PIR:I49762 RefSeq:NP_032319.1
UniGene:Mm.140811 ProteinModelPortal:P24815 SMR:P24815
STRING:P24815 PhosphoSite:P24815 PaxDb:P24815 PRIDE:P24815
Ensembl:ENSMUST00000107016 GeneID:15492 KEGG:mmu:15492
InParanoid:P24815 OMA:MAGWSCL SABIO-RK:P24815 NextBio:288366
Bgee:P24815 Genevestigator:P24815 GermOnline:ENSMUSG00000027871
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 Uniprot:P24815
Length = 373
Score = 155 (59.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 68/243 (27%), Positives = 110/243 (45%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ E+ ALDK+ + + + L+GDI A
Sbjct: 7 LVTGAGGFVGQRIIKMLVQEKELQEVRALDKVFRPETKEEFSKLQTKTKVTVLEGDILDA 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +GI ++H AA V + N+ GT LLEAC + V FI
Sbjct: 67 QCLRR--ACQGISVVIHTAAVIDVTGVIPRQ-TILDVNLKGTQNLLEAC-VQASVPAFIF 122
Query: 136 VSTDEVYGETDMESDI--GNPEAS-QLLPTNPYSATKAGAEMLVMAYHRSY----G-LPT 187
S+ +V G + + G+ E + + ++PY +K AE V+A + S G L T
Sbjct: 123 CSSVDVAGPNSYKKIVLNGHEEQNHESTWSDPYPYSKKMAEKAVLAANGSMLKNGGTLNT 182
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVILH 246
R +YG P I I+ A+K + L + G S + + +Y +VA A ++
Sbjct: 183 CALRPMYIYGERS-P--FIFNAIIRALKNKGILCVTGKFS-IANPVYVENVAWAH-ILAA 237
Query: 247 RGV 249
RG+
Sbjct: 238 RGL 240
Score = 47 (21.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEW 324
+K +R LG++ WEE + T EW
Sbjct: 332 KKAQRDLGYEPLVNWEEAKQKTSEW 356
>TIGR_CMR|CJE_1612 [details] [associations]
symbol:CJE_1612 "GDP-L-fucose synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0009242 "colanic acid
biosynthetic process" evidence=ISS] [GO:0050577 "GDP-L-fucose
synthase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GO:GO:0042350 RefSeq:YP_179593.1 ProteinModelPortal:Q5HSZ2
STRING:Q5HSZ2 GeneID:3232240 KEGG:cjr:CJE1612 PATRIC:20045021
BioCyc:CJEJ195099:GJC0-1642-MONOMER Uniprot:Q5HSZ2
Length = 349
Score = 134 (52.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 211 LLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHV---------YNVGTKKE 261
+L +K + I G+G+ R +LY D+A A I+ I H+ N+G +K
Sbjct: 221 ILGVKENSIEIWGSGNPKREFLYSDDLANACIHIMQNINIEHINKIDRDNPHINIGPEKN 280
Query: 262 RSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLT 321
S+ ++A + T+ + E E Y +P + K+K++ W+ T E+G++ T
Sbjct: 281 YSIKELAYLLKTVIQFEGE--FRYNLSKPDGTYEKLTCCDKIKQMNWQAYTKLEDGIRST 338
Query: 322 LEWYKKN 328
WYK N
Sbjct: 339 FHWYKSN 345
Score = 68 (29.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 29/117 (24%), Positives = 48/117 (41%)
Query: 86 GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGE- 144
G+D F A+ DN + NN I+ +++ VK+ + +S+ VY E
Sbjct: 69 GMDAHRKFRAEFIYDN-----LQIQNNVIHQSYI--------NNVKKLLFISSTSVYPEH 115
Query: 145 --TDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPN 199
++ + Q L PY+ K + AY YG+ I+ +YGPN
Sbjct: 116 ASLPIKEECLLSGKLQYLH-EPYAIAKIAGMKMCEAYSDRYGVNFISVCPTTLYGPN 171
Score = 63 (27.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 31/134 (23%), Positives = 57/134 (42%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKN-YPDYEIVALDKLDYCS-SLKNLHPSRASPNFKFL 68
K KI I G G +GS + +L N Y + +LD S + P+F FL
Sbjct: 3 KNDKIYIAGHRGLVGSAILRKLKDNGYENLIYKTHSELDLTDQSAVKFFFEKEKPDFVFL 62
Query: 69 ---K-GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL--- 121
K G + + + + + Q++++N F ++ ++Y H L
Sbjct: 63 CAAKLGGMDAHRKFRAEFIYDNLQIQNNVIHQSYINNVKKLLF-ISSTSVYPEHASLPIK 121
Query: 122 EACKLTGQVKRFIH 135
E C L+G+++ ++H
Sbjct: 122 EECLLSGKLQ-YLH 134
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 60/219 (27%), Positives = 102/219 (46%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
++L+TG AGF+G+++ L+ + + + D+ +L P A P + L+GDIT
Sbjct: 16 RVLVTGGAGFVGANLVTTLLDR--GHWVRSFDRAP------SLLP--AHPQLEVLQGDIT 65
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN----NIYGTHVLLEACKLTGQ 129
AD+ + +GIDTI H AA + + E+ N+ GT LL A + G
Sbjct: 66 DADVCAAAV--DGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG- 122
Query: 130 VKRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT 187
V+RF++ S++ V G+ D P + + Y+ TK AE V+A + G+ T
Sbjct: 123 VQRFVYTSSNSVVMGGQNIAGGDETLPYTDRF--NDLYTETKVVAERFVLAQNGVDGMLT 180
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226
R + ++G + + K +KG + G S
Sbjct: 181 CAIRPSGIWGNGD--QTMFRKLFESVLKGHVKVLVGRKS 217
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 156 (60.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 69/250 (27%), Positives = 103/250 (41%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCS--SLKNLHPSRAS--PNFKFLKG 70
IL+TG AG+IGSH +L+ Y V +D LD S S++ + N +
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLG--GYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQV 62
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+ + + D +MHFA V S + NNN+ T LLE G
Sbjct: 63 DLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHG-C 121
Query: 131 KRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPT--- 187
K+ + S+ VYG ++ E S L +PY TK E + R G P
Sbjct: 122 KKLVFSSSATVYG---WPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQR--GDPEWRI 176
Query: 188 ITTRGNNVYG----------PNQFPEKLIPKFILLAMKGQ--QLPIHG------NGSNVR 229
I R N G P P L+P ++ + G+ L I+G +G+ VR
Sbjct: 177 IMLRYFNPVGAHPSGRIGEDPCGTPNNLMP-YVQQVVVGRLPNLKIYGTDYTTKDGTGVR 235
Query: 230 SYLYCADVAE 239
Y++ D+A+
Sbjct: 236 DYIHVVDLAD 245
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 136 (52.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 132 RFIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
R + ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 40 RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 99
Query: 190 TRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 100 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 159
Query: 248 GV 249
V
Sbjct: 160 NV 161
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 136 (52.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 105 NSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDM--ESDIGNPEASQLLPT 162
N + N GT +L K G R + ST EVYG+ ++ +S+ + + P
Sbjct: 3 NPIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR 60
Query: 163 NPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPE--KLIPKFILLAMKGQQLP 220
Y K AE + AY + G+ R N +GP +++ FIL A++G+ L
Sbjct: 61 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 120
Query: 221 IHGNGSNVRSYLY 233
++G+GS R++ Y
Sbjct: 121 VYGSGSQTRAFQY 133
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 136 (52.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 132 RFIHVSTDEVYGETDM--ESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
R + ST EVYG+ ++ +S+ + + P Y K AE + AY + G+
Sbjct: 40 RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 99
Query: 190 TRGNNVYGPNQFPE--KLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHR 247
R N +GP +++ FIL A++G+ L ++G+GS R++ Y +D+ +++
Sbjct: 100 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 159
Query: 248 GV 249
V
Sbjct: 160 NV 161
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 155 (59.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 61/234 (26%), Positives = 100/234 (42%)
Query: 13 KKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFK-FLK- 69
K+ LITG G GS++ L+ K Y + ++ S + +L+ P + FL
Sbjct: 2 KRALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GD+ + LL + D + + AAQ+HV SF + G+ LLEA +L+
Sbjct: 62 GDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 130 VKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 189
RF S+ E++G + + E + P +PY A K + Y +YGL +
Sbjct: 122 HCRFYQASSSEMFGASPPPQN----ELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVN 177
Query: 190 TRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAE 239
N P + F + I + + G Q ++ GN VR + Y + E
Sbjct: 178 GILFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVE 231
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 144 (55.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSR--ASPNFKFLKGDI 72
+LITG G+IGS + L++N DY++V +D L Y SS + F DI
Sbjct: 6 VLITGGTGYIGSFTSLALLEN--DYDVVIVDNL-YNSSAVAIDRIELICGKRPAFHNVDI 62
Query: 73 TCADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
T ++ + + ID+++HFAA V S E+ N+ G+ LL + + V
Sbjct: 63 TDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQ-KHNVC 121
Query: 132 RFIHVSTDEVYGE-TDMESDIGNPEASQLLPTNPYSATKAGAEMLV 176
+ S+ VYG+ T + + I PE + PTN Y TK+ E ++
Sbjct: 122 NIVFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGRTKSTIEDVI 167
Score = 56 (24.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 304 KRLGWKEKTPWEEGLKLTLEWYKKNP 329
K LGWK + E+ + +W K NP
Sbjct: 327 KELGWKTELRMEDACQDLWKWVKNNP 352
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 155 (59.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 69/248 (27%), Positives = 114/248 (45%)
Query: 11 KPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P-SRASPNF 65
K +K+ LITG G GS++ L+ K Y + IV +++L+ P + N
Sbjct: 21 KSRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNM 80
Query: 66 KFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEA 123
K GD+T + + +++E T I + AQ+HV SF + E+T + + GT LL+A
Sbjct: 81 KLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDA 138
Query: 124 CKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHR 181
K G + +F ST E+YG+ +I E + P +PY A K A +V+ +
Sbjct: 139 IKTCGLINSVKFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 182 SYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADV 237
+Y L + N P + F + I + + GQ + GN R + + D
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 238 AEAFDVIL 245
EA ++L
Sbjct: 256 VEAMWLML 263
>UNIPROTKB|Q5HTB4 [details] [associations]
symbol:flmA "Polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 143 (55.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
+ K ILITG G G T L++NY +I+ + D + AS ++
Sbjct: 2 FNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSR-DELKQFEMASVFNASC-MRYFI 59
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GD+ + ++ + +D ++H AA HV + N E NI+G +++AC G
Sbjct: 60 GDVRDKERLSTAM--RDVDFVIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENG- 116
Query: 130 VKRFIHVSTDE------VYGETDMESD 150
VK+ I +STD+ +YG T + SD
Sbjct: 117 VKKCIALSTDKACNPVNLYGATKLASD 143
Score = 55 (24.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 161 PTNPYSATKAGAEMLVMAYHRSYGLPTI---TTRGNNVYGPNQFPEKLIPKFILLAMKG- 216
P N Y ATK ++ L +A + G TR NV G ++P F L +G
Sbjct: 131 PVNLYGATKLASDKLFVAANNIAGNKQTRFGVTRYGNVVGSRG---SVVPFFKKLISEGA 187
Query: 217 QQLPI 221
++LPI
Sbjct: 188 KELPI 192
>TIGR_CMR|CJE_1485 [details] [associations]
symbol:CJE_1485 "polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 143 (55.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
+ K ILITG G G T L++NY +I+ + D + AS ++
Sbjct: 2 FNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSR-DELKQFEMASVFNASC-MRYFI 59
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GD+ + ++ + +D ++H AA HV + N E NI+G +++AC G
Sbjct: 60 GDVRDKERLSTAM--RDVDFVIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENG- 116
Query: 130 VKRFIHVSTDE------VYGETDMESD 150
VK+ I +STD+ +YG T + SD
Sbjct: 117 VKKCIALSTDKACNPVNLYGATKLASD 143
Score = 55 (24.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 161 PTNPYSATKAGAEMLVMAYHRSYGLPTI---TTRGNNVYGPNQFPEKLIPKFILLAMKG- 216
P N Y ATK ++ L +A + G TR NV G ++P F L +G
Sbjct: 131 PVNLYGATKLASDKLFVAANNIAGNKQTRFGVTRYGNVVGSRG---SVVPFFKKLISEGA 187
Query: 217 QQLPI 221
++LPI
Sbjct: 188 KELPI 192
>TAIR|locus:2051018 [details] [associations]
symbol:CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like
2" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009809 "lignin biosynthetic process"
evidence=ISS] [GO:0016621 "cinnamoyl-CoA reductase activity"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
HOGENOM:HOG000167998 EMBL:AC002332 ProtClustDB:CLSN2683499
EMBL:AY093143 EMBL:BT008718 IPI:IPI00521551 PIR:E84747
RefSeq:NP_180918.1 UniGene:At.42953 ProteinModelPortal:O22810
SMR:O22810 PaxDb:O22810 PRIDE:O22810 EnsemblPlants:AT2G33600.1
GeneID:817926 KEGG:ath:AT2G33600 TAIR:At2g33600 InParanoid:O22810
OMA:EIDIGEH PhylomeDB:O22810 ArrayExpress:O22810
Genevestigator:O22810 Uniprot:O22810
Length = 321
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 80/327 (24%), Positives = 144/327 (44%)
Query: 14 KILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
K+ +TGA GF+GS V N L+ ++Y + V + + LK L +A K K
Sbjct: 8 KVCVTGAGGFLGSWVVNHLLSRDYFVHGTVRDPGNEKYAHLKKL--DKAGDKLKLFK--- 62
Query: 73 TCADLMNY-LLVSE--GIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
ADL+NY L S G + H A + + + GT +L+AC + +
Sbjct: 63 --ADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKAC-VEAK 119
Query: 130 VKRFIHVST------DEVYGETDMESDIGNPEASQLLPT-NPYSATKAGAEMLVMAYHRS 182
VKR ++VS+ + ++ ++ + + + T N YS +K AE + +
Sbjct: 120 VKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAFEFAKR 179
Query: 183 YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFD 242
GL ++ V GP + + L+ +K + + R + DVA+A
Sbjct: 180 TGLDLVSVCPTLVLGP-VLQQHTVNASSLVLLKLLKEGYESRNNQERHLVDVRDVAQALL 238
Query: 243 VILHRGVI-GHVYNVG-TKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDD 300
++ + G +G T +E+ +VA + +L+ L Y++ D + +
Sbjct: 239 LVYEKAEAEGRYICIGHTVREQ---EVAEKLKSLY-LNYNYPKRYIEA----DGKVKVSS 290
Query: 301 QKLKRLGWKEKTPWEEGLKLTLEWYKK 327
+KL++LGW + P EE L ++E Y+K
Sbjct: 291 EKLQKLGWTYR-PLEETLVDSVESYRK 316
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 154 (59.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 86/329 (26%), Positives = 140/329 (42%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDI 72
++ILITGA GF+G ++ L+ Y+ L L + ++L +A + D+
Sbjct: 4 RRILITGANGFVGGYMIRELVA--AGYQHSELHTLTVSGAEQSLRIGQAH------RCDL 55
Query: 73 TCADLMNYLLVSEGIDTIMHFAA-----QTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+ ++ LL I+H AA Q D S + F G VL AC
Sbjct: 56 RDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVL--ACSPH 113
Query: 128 GQVKRFIHVSTDEVYGET-DMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 186
+ + + E YG + + + N E + L P PY+ATKA A++ + R+ GL
Sbjct: 114 AVL---VFAGSSESYGASFNTVAGAVN-EGTALRPLTPYAATKAAADV-ALGQMRNDGLN 168
Query: 187 TITTRGNNVYGPNQFPEKLIPKF---ILLAMKGQQLPIH--GNGSNVRSYLYCADVAEAF 241
+ R N GP Q P+ ++ F I + G P+ GN +R ++ DV +
Sbjct: 169 AVRFRAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVRDVVRGY 228
Query: 242 DVILHRG---VIGHVYNV--GTKKE-RSVLDVAADICTL-FKLEPEKTIHYVQDRPFNDH 294
+ L V V+N+ GT + RS+L+ DI + +E + D P
Sbjct: 229 RLALETELDPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRKNDVP---- 284
Query: 295 RYFLDDQKLK-RLGWKEKTPWEEGLKLTL 322
R + D + + LGW +E+ L TL
Sbjct: 285 RTWGDANRARTELGWVPYLAFEQTLVDTL 313
>MGI|MGI:96235 [details] [associations]
symbol:Hsd3b3 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 3" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96235 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0005743 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:M77015 IPI:IPI00111855
RefSeq:NP_001155214.1 RefSeq:NP_001155215.1 RefSeq:NP_001155216.1
RefSeq:NP_001155217.1 UniGene:Mm.158717 ProteinModelPortal:P26150
SMR:P26150 STRING:P26150 PaxDb:P26150 PRIDE:P26150
Ensembl:ENSMUST00000090743 Ensembl:ENSMUST00000107018
Ensembl:ENSMUST00000107019 GeneID:15494 KEGG:mmu:15494 CTD:15494
InParanoid:P26150 SABIO-RK:P26150 NextBio:288374 Bgee:P26150
Genevestigator:P26150 GermOnline:ENSMUSG00000062410 Uniprot:P26150
Length = 373
Score = 150 (57.9 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 66/243 (27%), Positives = 106/243 (43%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ EI LDK+ + + S L+GDI
Sbjct: 7 LVTGAGGFLGQRIIQLLVQEKDLEEIRVLDKVFKPETREQFFNLGTSIKVTVLEGDIL-- 64
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
D +GI ++H AA V + N+ GT LLEAC + V FI
Sbjct: 65 DTQYLRRACQGISVVIHTAAIIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAFIF 122
Query: 136 VSTDEVYGETDMESDIGN---PEASQLLPTNPYSATKAGAEMLVMAYHRSY----G-LPT 187
S+ +V G + + N E + ++PY +K AE V+A + S G L T
Sbjct: 123 SSSVDVAGPNSYKDIVLNGHEDEHRESTWSDPYPYSKKMAEKAVLAANGSMLKNGGTLQT 182
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS-NVRSYLYCADVAEAFDVILH 246
R +YG + + I+ A+K + + + G G + + +Y +VA A ++
Sbjct: 183 CALRPMCIYGERS---QFLSNTIIKALKNKFI-LRGGGKFSTANPVYVGNVAWAH-ILAA 237
Query: 247 RGV 249
RG+
Sbjct: 238 RGL 240
Score = 49 (22.3 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 290 PFNDH-------RYFLDDQKLKR-LGWKEKTPWEEGLKLTLEW 324
PFN H + +K +R LG++ WEE + T EW
Sbjct: 314 PFNRHLVTLTASTFTFSYKKAQRDLGYEPLVSWEEAKQKTSEW 356
>MGI|MGI:109598 [details] [associations]
symbol:Hsd3b6 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 6" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006700 "C21-steroid
hormone biosynthetic process" evidence=ISO] [GO:0006702 "androgen
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0034757 "negative regulation of iron ion transport"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:109598 GO:GO:0016021
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 EMBL:AL606755 GeneTree:ENSGT00550000074557 CTD:15497
EMBL:AF031170 EMBL:AK142267 EMBL:CH466620 IPI:IPI00420666
RefSeq:NP_038849.2 UniGene:Mm.14435 ProteinModelPortal:O35469
SMR:O35469 STRING:O35469 PRIDE:O35469 Ensembl:ENSMUST00000029463
Ensembl:ENSMUST00000170847 GeneID:15497 KEGG:mmu:15497
InParanoid:Q3UQN7 OMA:FIHISST NextBio:288386 Bgee:O35469
Genevestigator:O35469 GermOnline:ENSMUSG00000027869 Uniprot:O35469
Length = 373
Score = 150 (57.9 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 70/243 (28%), Positives = 104/243 (42%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ EI LDK + + + L+GDI
Sbjct: 7 LVTGAGGFLGQRIVQLLMQEKDLEEIRVLDKFFRPETREQFFNLDTNIKVTVLEGDIL-- 64
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
D +GI ++H AA V + N+ GT LLEAC + V FI
Sbjct: 65 DTQYLRKACQGISVVIHTAAVIDVTGVIPRQ-TILDVNLKGTQNLLEAC-IQASVPAFIF 122
Query: 136 VSTDEVYGETDMESDI--GNPEAS-QLLPTNPYSATKAGAEMLVMAYHRSY----G-LPT 187
S+ +V G + I GN E + + ++PY +K AE V+A + S G L T
Sbjct: 123 SSSVDVAGPNSYKEIILNGNEEEHHESIWSDPYPYSKKMAEKAVLAANGSMLKIGGTLHT 182
Query: 188 ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVILH 246
R +YG P I I+ A+K + L G S +Y +VA A ++
Sbjct: 183 CALRPMYIYGERS-P--FISNTIITALKNKNILGCTGKFSTANP-VYVGNVAWAH-ILAA 237
Query: 247 RGV 249
RG+
Sbjct: 238 RGL 240
Score = 49 (22.3 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 290 PFNDHRYFLDD-------QKLKR-LGWKEKTPWEEGLKLTLEW 324
PFN H L +K +R LG++ WEE + T EW
Sbjct: 314 PFNRHLVTLTGSTFTFSYKKAQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q32L94 [details] [associations]
symbol:SDR42E1 "Short-chain dehydrogenase/reductase family
42E member 1" species:9913 "Bos taurus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:BT021824
EMBL:BC109694 IPI:IPI00689930 RefSeq:NP_001073761.1
UniGene:Bt.35781 ProteinModelPortal:Q32L94 GeneID:532489
KEGG:bta:532489 CTD:93517 HOGENOM:HOG000168007 InParanoid:Q32L94
OrthoDB:EOG40ZQZ0 NextBio:20875710 Uniprot:Q32L94
Length = 393
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 66/246 (26%), Positives = 111/246 (45%)
Query: 9 SYK-PKK-ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPN-F 65
S+K PK+ +LITG G+ G + L N ++ D S HP++ P
Sbjct: 3 SHKSPKETVLITGGGGYFGFRLGCAL--NLLGVHVILFD----IS-----HPAQTIPEGI 51
Query: 66 KFLKGDITC-ADLMNYLLVSEGIDT--IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLE 122
+F+ GDI C +D+ N +G+D + H A+ N N+ GT +L+
Sbjct: 52 RFILGDIRCLSDIENAF---QGVDVACVFHIASYGMSGREQLNRSLIEEINVGGTDNILQ 108
Query: 123 ACKLTGQVKRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM--- 177
AC+ G V R ++ ST V G+ D P L + YS TK+ AE V+
Sbjct: 109 ACRRRG-VPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLSAN 167
Query: 178 --AYHRSYG-LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234
A R G L T R +YGP + ++ +P+ + KG ++G+ ++ +++
Sbjct: 168 GTALERGGGVLSTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHV 225
Query: 235 ADVAEA 240
++ +A
Sbjct: 226 DNLVQA 231
>TIGR_CMR|CPS_2092 [details] [associations]
symbol:CPS_2092 "polysaccharide biosynthesis protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG1086
RefSeq:YP_268819.1 ProteinModelPortal:Q483E8 SMR:Q483E8
STRING:Q483E8 GeneID:3520969 KEGG:cps:CPS_2092 PATRIC:21467297
HOGENOM:HOG000257079 OMA:ICIHAAA ProtClustDB:CLSK825821
BioCyc:CPSY167879:GI48-2162-MONOMER InterPro:IPR020025
TIGRFAMs:TIGR03589 Uniprot:Q483E8
Length = 337
Score = 152 (58.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 46/147 (31%), Positives = 67/147 (45%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYE---IVALDKLDYCSSLKNLHPSRASPNFKFLK 69
K +LITG G G ++ YPD + I + D+L S +K +P P +F
Sbjct: 5 KVVLITGGTGSFGKKFIETILDRYPDVKKIIIFSRDELKQ-SIIKQKYPEYDFPQLRFFI 63
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GD+ D EG+D I+H AA VD + N E N+ G ++ A G
Sbjct: 64 GDVR--DRSRITQACEGVDVIIHAAAIKQVDTAEYNPTECIRTNVDGAENVIHAALACG- 120
Query: 130 VKRFIHVSTDE------VYGETDMESD 150
VK + +STD+ +YG T + SD
Sbjct: 121 VKDVVALSTDKACAPINLYGATKLVSD 147
Score = 44 (20.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 22/64 (34%), Positives = 27/64 (42%)
Query: 161 PTNPYSATKAGAEMLVMAYHRSYGLPTI---TTRGNNVYGPNQFPEKLIPKFILLAMKGQ 217
P N Y ATK ++ L A + G I R NV G +IP FI +G
Sbjct: 135 PINLYGATKLVSDKLFAAANNIRGSKDIKFSAVRYGNVMGSRG---SVIPFFIDKKKEGI 191
Query: 218 QLPI 221
LPI
Sbjct: 192 -LPI 194
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 154 (59.3 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 67/245 (27%), Positives = 111/245 (45%)
Query: 13 KKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHP-SRA--SPNFKF 67
KK+ LITG G GS++ L+ K Y + IV +++L+ S+A N K
Sbjct: 9 KKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIEGNMKL 68
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKL 126
GD+T + + ++ + I + AQ+HV SF + E+T + + GT LL+A K
Sbjct: 69 HYGDLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAIKT 127
Query: 127 TGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYG 184
G + +F ST E++G+ +I E + P +PY A K A +V+ + +Y
Sbjct: 128 CGLINSVKFYQASTSELFGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN 184
Query: 185 LPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQQLPIH-GNGSNVRSYLYCADVAEA 240
L + N P + F + I + + GQ GN R + + D EA
Sbjct: 185 LFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMDSFSLGNLDAKRDWGHARDYVEA 244
Query: 241 FDVIL 245
++L
Sbjct: 245 MWLML 249
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 160 (61.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 60/232 (25%), Positives = 103/232 (44%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDY-CSSLKNLHPSRASPNFKFLKGDIT 73
+L+ G GF+GSH+ L+ DY+ A+ +D C+ +N ++ DIT
Sbjct: 13 VLVVGGCGFLGSHIVRMLLD---DYKCSAVSAVDLRCT--RNRREG-----VQYHDADIT 62
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRF 133
A+ + + D ++H A+ NS + F N+ GT ++EACK G VK
Sbjct: 63 NAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAG-VKAL 121
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLL-----PTNPYSATKAGAEMLVMAYHRSYGLPTI 188
+ S+ V +D SD+ N + + T YS TKA AE +V+ + L T
Sbjct: 122 VFTSSASVI--SDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKANEPGKLLTA 179
Query: 189 TTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
R + ++G + + +G+ G+ +N+ + Y +VA A
Sbjct: 180 AIRPSGIFGEGD--SMVTANLVKTYREGKWKVQVGDNNNLFDFTYAGNVAHA 229
Score = 37 (18.1 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 295 RYFLDDQKLKRLGWKEKTPWEEGLKLTLEW 324
RY+ + +RLG+ EEG++ +++
Sbjct: 329 RYYNITKAKQRLGYAPIVSMEEGVRRGVQY 358
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 153 (58.9 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 51/191 (26%), Positives = 92/191 (48%)
Query: 49 YCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE 108
Y ++ ++ + P F +GD+ C L + + E + + H A+ + G F+
Sbjct: 34 YTVNVFDIRQAYELPGVTFYQGDL-CDKLALVMALKE-VSIVFHCASPAPGSDD-GALFQ 90
Query: 109 FTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSA 167
N I GT +++AC G K + S V+ TD+++ + P A + P + Y+
Sbjct: 91 RVN--IDGTRTVIQACHEAGVQKLILTSSASVVFEGTDIKNGKEDLPYAKK--PIDYYTE 146
Query: 168 TKAGAEMLVM-AYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226
TK E LV+ A + G T+ R + ++GP P+ L+P + A +G+ I G+GS
Sbjct: 147 TKIKQEKLVLEACSKEKGFLTVAIRPHGIFGPRD-PQ-LVPILVDTARRGKMKFIIGDGS 204
Query: 227 NVRSYLYCADV 237
N+ + Y +V
Sbjct: 205 NLVDFTYVENV 215
Score = 43 (20.2 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 294 HRYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPH 330
H Y+ + + +G++ P +E + T+E Y PH
Sbjct: 307 HHYYSCARAKQDMGYRPLVPLQEAVVRTVESY---PH 340
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 86/334 (25%), Positives = 147/334 (44%)
Query: 11 KPKKI-LITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
+P+KI LITG G GS++T L+ K Y + ++ + +++ + N +
Sbjct: 26 EPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALM 85
Query: 69 K---GDITCAD-LMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIY-GTHVLLEA 123
K D+T A L ++ V + D + + AAQ+HV SF ++T + + G LLEA
Sbjct: 86 KLHYADLTDASSLRRWIDVIKP-DEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEA 143
Query: 124 CKL----TGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAY 179
+ +G+ ++ + E++G T E + P +PY+A+K A + Y
Sbjct: 144 VRSHTIDSGRTVKYYQAGSSEMFGSTPPPQS----ETTPFHPRSPYAASKCAAHWYTVNY 199
Query: 180 HRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMK----GQQLPIH-GNGSNVRSYLYC 234
+YGL N P + E + + I A+ G Q + GN R + +
Sbjct: 200 REAYGLFACNGILFNHESPRR-GENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFA 258
Query: 235 ADVAEAFDVILHRGVIGHVYNVGTKKERSV---LDVAADICTL-FKLEPEKTIHYVQDRP 290
D EA ++L + Y V T++ +V LDV+ L +K E Y RP
Sbjct: 259 GDYVEAMWLMLQQEKPDD-YVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF--RP 315
Query: 291 FNDHRYFLDDQKLKR-LGWKEKTPWEEGLKLTLE 323
D K K LGWK + +E+ +K+ ++
Sbjct: 316 AEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVD 349
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 71/252 (28%), Positives = 107/252 (42%)
Query: 88 DTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHV-STDEVYGETD 146
+ ++H AA + V + G + N+ GT LLEA + R + + S+ VYG
Sbjct: 70 EVVVHLAAISFV--AHGEADAIYRANVVGTRNLLEALAGLSRTPRAVLLASSANVYGNAP 127
Query: 147 MESDIGNPEASQLLPTNPYSATKAGAEMLVMAY-HRSYGLPTITTRGNNVYGPNQFPEKL 205
+E E+ L P N Y+ +K E + + HR LP + R N G Q L
Sbjct: 128 VELI---DESVSLAPANDYAVSKLAMEYMARLWMHR---LPIVIARPFNYTGVGQASHFL 181
Query: 206 IPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVL 265
IPK + + + GN R + VA A+ +L G V NVG+ + S+
Sbjct: 182 IPKIVSHFQRRASVIELGNLDVERDFSDVRVVALAYVRLLEVVPAGQVVNVGSGQVVSLR 241
Query: 266 DVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRL-GWKEKTPWEEGLKLTLEW 324
+V A + + E E ++ R R D +LK L G + TP E TLEW
Sbjct: 242 EVLAMMSGISGHEIEVRVNPEFVRANEVKRLQGDVSRLKELIGGYQPTPLME----TLEW 297
Query: 325 -YKKNPHWWGDV 335
++ P G V
Sbjct: 298 MFRNGPECIGSV 309
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 151 (58.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 56/193 (29%), Positives = 89/193 (46%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASP-NFKFLKGDITC 74
L+TG GF+G H+ L++ P + + L S L+ L +A P ++GD+T
Sbjct: 13 LVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEEL---KAGPVQVTAIQGDVTQ 69
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN--NIYGTHVLLEACKLTGQVKR 132
A G ++H A V FG + T + N+ GT +++AC TG +
Sbjct: 70 AH--EVAAAMSGSHVVIHTAGLVDV---FGKASPKTIHKVNVQGTQNVIDACVQTG-TQY 123
Query: 133 FIHVSTDEVYGETDMESDI--GNPEAS-QLLPTNPYSATKAGAEMLVM-AYHRSY--GLP 186
++ S+ EV G GN + + + ++PY +KA AE LV+ A R GLP
Sbjct: 124 LVYTSSMEVVGPNIKGHPFYRGNEDTPYEAVHSHPYPCSKALAEQLVLEANGRKVNGGLP 183
Query: 187 TITT--RGNNVYG 197
+T R +YG
Sbjct: 184 LVTCALRPTGIYG 196
Score = 45 (20.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 304 KRLGWKEKTPWEEGLKLTLEW 324
+ G+K WEE T++W
Sbjct: 340 RHFGYKPLFSWEESRTRTIQW 360
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 54/174 (31%), Positives = 81/174 (46%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRAS-PNFKFLKG-DI 72
IL+TGAAGFIGSH L+ + Y ++ +D S+ + H + S L G D+
Sbjct: 3 ILVTGAAGFIGSHTVLELLNS--GYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDV 60
Query: 73 ------TCADLMNYLLVSEG-IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
C + + SE D I+H AA V S ++ +NN+ + L++ C
Sbjct: 61 PFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMC- 119
Query: 126 LTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP--TNPYSATKAGAEMLVM 177
L VK F+ S+ VYG S++ E SQ TNPY TK E +++
Sbjct: 120 LKYNVKNFVFSSSATVYGPP---SELPITEKSQTGQGITNPYGQTKYMMEQILI 170
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 134 (52.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 54/196 (27%), Positives = 91/196 (46%)
Query: 54 KNLHPSRASPNFK-----FLKGDIT-CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSF 107
KN+H +F+ F GDI DL + +GI T+ H A+ TH G +
Sbjct: 28 KNVHVFDIRKSFEDDRVTFHIGDIRKTEDLES---ACKGITTVFHTASPTH-----GMGY 79
Query: 108 E-FTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNP 164
+ + + N+ GT L+EAC G VK+ ++ S+ V G+ + D P + + +P
Sbjct: 80 DIYYSVNVIGTERLIEACIKCG-VKQLVYTSSSSVVFNGKDIVNGDETLPYVDKHI--DP 136
Query: 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGN 224
Y+ TK E V+ S L R ++GP + P+F+ A +G+ + G+
Sbjct: 137 YNKTKELGERAVLKAKGS-NLLVCALRPAGIFGPREVQGW--PQFLKAAKEGKNKFMFGD 193
Query: 225 GSNVRSYLYCADVAEA 240
G+N+ + Y +V A
Sbjct: 194 GNNLCDWTYIDNVVHA 209
Score = 62 (26.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 264 VLDVAADICTLF-KLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTL 322
++D+ + + F KL P TI + N RYF ++ K L +K +G++ T
Sbjct: 269 MIDLITLLLSPFVKLHP--TISLFRIIYTNSTRYFNIEKAKKELKYKPIVSLRDGMEKTK 326
Query: 323 EWY-KKNP 329
EW+ ++NP
Sbjct: 327 EWFLQQNP 334
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 106 (42.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 41/138 (29%), Positives = 65/138 (47%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-HPSRA--SPNFKF 67
KP I + GA GFIGSH+ +L+ P ++++ALD Y +K+L P + +F
Sbjct: 16 KPMTICMIGAGGFIGSHLCEKLMTETP-HKVLALDV--YNDKIKHLLEPDTVQWAGRIQF 72
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
+ +I + L+ + TI A T D + + +N +++ C
Sbjct: 73 HRINIKHDSRLEGLIKMADL-TINLAAICTPADYNT-RPLDTIYSNFIDALPVVKYCSEN 130
Query: 128 GQVKRFIHVSTDEVYGET 145
KR IH ST EVYG+T
Sbjct: 131 N--KRLIHFSTCEVYGKT 146
Score = 90 (36.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 45/186 (24%), Positives = 78/186 (41%)
Query: 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ-F------PEKLIPKFILL----A 213
Y+ K E LV A GL R N GP F P + +P+ +
Sbjct: 185 YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Query: 214 MKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--VIGHVYNVGT-KKERSVLDVAAD 270
++ + L + G + R+++Y D EA +++ GH++NVG E +V +A
Sbjct: 245 LRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEM 304
Query: 271 ICTLF-KLEPEKTIHY----VQDRPFNDHRYFLDDQKL-------KRLGWKEKTPWEEGL 318
+ ++ K+ E I V + F Y D+++ ++LGW KT + L
Sbjct: 305 MTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLL 364
Query: 319 KLTLEW 324
+ TL +
Sbjct: 365 ESTLTY 370
>DICTYBASE|DDB_G0276473 [details] [associations]
symbol:DDB_G0276473 "NAD-dependent
epimerase/dehydratase family protein" species:44689 "Dictyostelium
discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 dictyBase:DDB_G0276473
GO:GO:0045335 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AAFI02000015 eggNOG:COG1088
OMA:ETMKLLW RefSeq:XP_643167.1 ProteinModelPortal:Q86HU8
PRIDE:Q86HU8 EnsemblProtists:DDB0234265 GeneID:8620575
KEGG:ddi:DDB_G0276473 InParanoid:Q86HU8 ProtClustDB:CLSZ2430901
Uniprot:Q86HU8
Length = 363
Score = 154 (59.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 68/278 (24%), Positives = 123/278 (44%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK-LDYCSSLKNLH-PSRASPNFKFL 68
KP +LI G GFIG ++ L++ +I DK L + L H + A P+ +++
Sbjct: 3 KPN-VLILGGVGFIGRNLVQYLVEQKCCNKIRVADKVLPATAFLGAKHLEAFADPSVEYM 61
Query: 69 KGDITCADLMNYLLVSEG--IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHV--LLEAC 124
+G++ A + EG + + + A +T +G + N +Y V EA
Sbjct: 62 QGNLASAASITKCFTLEGGKFNIVFNLAGET----KYGQTDAVYNEKVYDVSVKCATEAA 117
Query: 125 KLTGQVKRFIHVSTDEVYGETDMESDIGNP-EASQLLPTNPYSATKAGAEMLVMAYHRSY 183
K+ G V +FI VST ++Y S G+ + L+ ++ A KA E+
Sbjct: 118 KV-G-VDKFIEVSTAQIYSSNKKPSKEGDKTDPWTLIASHKLKAEKALKEI--------N 167
Query: 184 GLPTITTRGNNVYGPNQFPEKLIPKFILLAM---KGQQLPIHGNGSNVRSYLYCADVAEA 240
GL I R + VYGP + P+ I A+ +++ +G + ++ DV +A
Sbjct: 168 GLNLIIVRPSVVYGPGDILG-ISPRIITGAVYKHTNEKMKFLWDGDLKYNTVHVNDVCKA 226
Query: 241 FDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLE 278
+ G +G VYN+ K + ++ + +F ++
Sbjct: 227 LWFLSQNGKVGDVYNLSDKGDTDAQTISKILEKIFAIK 264
Score = 37 (18.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 443 VETIRTNVMGTLTLADVCKEKN 464
V + +NV +L + DVC+E N
Sbjct: 268 VGNMLSNV-ASLKMKDVCEEVN 288
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 147 (56.8 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 49/191 (25%), Positives = 88/191 (46%)
Query: 49 YCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE 108
Y ++ ++ +P +F GD+ C+ Y + +G+ T+ H A+ +N N
Sbjct: 45 YAVNVFDIRQGFDNPRVQFFLGDL-CSQQDLYPAL-KGVSTVFHCASPPPFNN---NKEL 99
Query: 109 FTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSA 167
F N GT ++E CK G K + S ++ D+++ + P A++ P + Y+
Sbjct: 100 FYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNGTEDLPYATK--PIDYYTE 157
Query: 168 TKAGAEMLVMAYHR-SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226
TK E V+ H T R + ++GP P+ L+P I A KG+ + GNG
Sbjct: 158 TKILQERAVLGAHDPEKNFLTTAIRPHGIFGPRD-PQ-LVPILIEAAKKGKMKFMIGNGK 215
Query: 227 NVRSYLYCADV 237
N+ + + +V
Sbjct: 216 NLVDFTFVENV 226
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 107 (42.7 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 42/139 (30%), Positives = 68/139 (48%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNL-HPSRA--SPNFKF 67
+P I + GA GFIGSH+ +L+ P ++++ALD Y +K+L P S +F
Sbjct: 16 QPLTICMIGAGGFIGSHLCEKLLTETP-HKVLALDV--YNDKIKHLLEPDTVEWSGRIQF 72
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQ-THVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
+ +I + L+ + D I++ AA T D + + +N +++ C
Sbjct: 73 HRINIKHDSRLEGLV--KMADLIINLAAICTPADYNT-RPLDTIYSNFIDALPVVKYCSE 129
Query: 127 TGQVKRFIHVSTDEVYGET 145
KR IH ST EVYG+T
Sbjct: 130 NN--KRLIHFSTCEVYGKT 146
Score = 87 (35.7 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 45/186 (24%), Positives = 78/186 (41%)
Query: 165 YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ-F------PEKLIPKFILL----A 213
Y+ K E LV A GL R N GP F P + +P+ +
Sbjct: 185 YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Query: 214 MKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--VIGHVYNVGT-KKERSVLDVAAD 270
++ + L + G + R+++Y D EA +++ GH++NVG E +V +A
Sbjct: 245 LRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEM 304
Query: 271 ICTLF-KLEPEKTIHY----VQDRPFNDHRYFLDDQKL-------KRLGWKEKTPWEEGL 318
+ ++ K+ E I V + F Y D+++ ++LGW KT + L
Sbjct: 305 MTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLL 364
Query: 319 KLTLEW 324
+ TL +
Sbjct: 365 ESTLTY 370
>UNIPROTKB|G3X7Y2 [details] [associations]
symbol:SDR42E1 "Short-chain dehydrogenase/reductase family
42E member 1" species:9913 "Bos taurus" [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:DAAA02046125 EMBL:DAAA02046126
Ensembl:ENSBTAT00000048714 Uniprot:G3X7Y2
Length = 393
Score = 147 (56.8 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 65/246 (26%), Positives = 110/246 (44%)
Query: 9 SYK-PKK-ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPN-F 65
S+K PK+ +LITG G+ G + L N ++ D S P++ P
Sbjct: 3 SHKSPKETVLITGGGGYFGFRLGCAL--NLLGVHVILFD----IS-----RPAQTIPEGI 51
Query: 66 KFLKGDITC-ADLMNYLLVSEGIDT--IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLE 122
+F+ GDI C +D+ N +G+D + H A+ N N+ GT +L+
Sbjct: 52 RFILGDIRCLSDIENAF---QGVDVACVFHIASYGMSGREQLNRSLIEEINVGGTDNILQ 108
Query: 123 ACKLTGQVKRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM--- 177
AC+ G V R ++ ST V G+ D P L + YS TK+ AE V+
Sbjct: 109 ACRRRG-VPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLSAN 167
Query: 178 --AYHRSYG-LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234
A R G L T R +YGP + ++ +P+ + KG ++G+ ++ +++
Sbjct: 168 GTALERGGGVLSTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHV 225
Query: 235 ADVAEA 240
++ +A
Sbjct: 226 DNLVQA 231
>UNIPROTKB|F1MDX4 [details] [associations]
symbol:SDR42E1 "Short-chain dehydrogenase/reductase family
42E member 1" species:9913 "Bos taurus" [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:FVWDGLL EMBL:DAAA02046125
EMBL:DAAA02046126 IPI:IPI00840690 Ensembl:ENSBTAT00000024475
Uniprot:F1MDX4
Length = 398
Score = 147 (56.8 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 65/246 (26%), Positives = 110/246 (44%)
Query: 9 SYK-PKK-ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPN-F 65
S+K PK+ +LITG G+ G + L N ++ D S P++ P
Sbjct: 3 SHKSPKETVLITGGGGYFGFRLGCAL--NLLGVHVILFD----IS-----RPAQTIPEGI 51
Query: 66 KFLKGDITC-ADLMNYLLVSEGIDT--IMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLE 122
+F+ GDI C +D+ N +G+D + H A+ N N+ GT +L+
Sbjct: 52 RFILGDIRCLSDIENAF---QGVDVACVFHIASYGMSGREQLNRSLIEEINVGGTDNILQ 108
Query: 123 ACKLTGQVKRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM--- 177
AC+ G V R ++ ST V G+ D P L + YS TK+ AE V+
Sbjct: 109 ACRRRG-VPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLSAN 167
Query: 178 --AYHRSYG-LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYC 234
A R G L T R +YGP + ++ +P+ + KG ++G+ ++ +++
Sbjct: 168 GTALERGGGVLSTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHV 225
Query: 235 ADVAEA 240
++ +A
Sbjct: 226 DNLVQA 231
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 150 (57.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 78/288 (27%), Positives = 128/288 (44%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALD-KLDYCSSLKNLHPSRASPNFKFLKGDI 72
++LI G GFIG+H+T RL++ YE+ LD D S N HP +F F++GDI
Sbjct: 317 RVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLN-HP-----HFHFVEGDI 369
Query: 73 TC-ADLMNYLLVSEGIDTIMHFAA-QTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
+ ++ + Y + + D ++ A T ++ + N + ++ C
Sbjct: 370 SIHSEWIEYHV--KKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLRIIRYC--VKYR 424
Query: 131 KRFIHVSTDEVYGETDMESD-IGNPEASQLL--PTN-P---YSATKAGAEMLVMAYHRSY 183
KR I ST EVYG M SD + + S L+ P N P YS +K + ++ AY
Sbjct: 425 KRIIFPSTSEVYG---MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 481
Query: 184 GLPTITTRGNNVYGP---NQFPEKL-----IPKFILLAMKGQQLPIHGNGSNVRSYLYCA 235
GL R N GP N ++ I + IL ++G + + G R +
Sbjct: 482 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR 541
Query: 236 DVAEA-FDVILHRG--VIGHVYNVGT-KKERSVLDVAADICTLFKLEP 279
D EA + +I + G G + N+G + E S+ ++ + F+ P
Sbjct: 542 DGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 589
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 83/331 (25%), Positives = 141/331 (42%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TGA G +G ++ L+ S K+ H + +P+ K L +
Sbjct: 2 KILLTGANGMVGKNI------------------LELAS--KHQH-TFLTPSSKVLNL-LD 39
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTH-VDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
A YL V D I+H A + + + +F +N+ +L + K G +K+
Sbjct: 40 AASTQAYL-VEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCG-IKQ 97
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLL------PTNP-YSATK-AGAEMLVMAYHRSYG 184
F+++S+ +Y D NP + +L+ PTN Y+ K A + H
Sbjct: 98 FLNLSSSCMYPR-----DALNPLSEELILKGELEPTNEGYALAKIASTRLCEYISHEEPE 152
Query: 185 LPTITTRGNNVYGPN-QF-PEK--LIPKFILLAMKGQQ-----LPIHGNGSNVRSYLYCA 235
L T N+YG + +F P +IP I + +Q + I G+G R ++Y
Sbjct: 153 LLYKTIIPCNLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAG 212
Query: 236 DVAE-AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH 294
D+A+ F I + + NVG ++ ++ D I + T + +P
Sbjct: 213 DLADFIFYAIANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSG--TFKHDLTKPVGMK 270
Query: 295 RYFLDDQKLKRLGWKEKTPWEEGLKLTLEWY 325
+ +DD KL GW KT EGLK T++++
Sbjct: 271 QKLIDDNKLNAFGWSYKTDLTEGLKNTVQFF 301
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 83/331 (25%), Positives = 141/331 (42%)
Query: 14 KILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDIT 73
KIL+TGA G +G ++ L+ S K+ H + +P+ K L +
Sbjct: 2 KILLTGANGMVGKNI------------------LELAS--KHQH-TFLTPSSKVLNL-LD 39
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTH-VDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKR 132
A YL V D I+H A + + + +F +N+ +L + K G +K+
Sbjct: 40 AASTQAYL-VEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCG-IKQ 97
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLL------PTNP-YSATK-AGAEMLVMAYHRSYG 184
F+++S+ +Y D NP + +L+ PTN Y+ K A + H
Sbjct: 98 FLNLSSSCMYPR-----DALNPLSEELILKGELEPTNEGYALAKIASTRLCEYISHEEPE 152
Query: 185 LPTITTRGNNVYGPN-QF-PEK--LIPKFILLAMKGQQ-----LPIHGNGSNVRSYLYCA 235
L T N+YG + +F P +IP I + +Q + I G+G R ++Y
Sbjct: 153 LLYKTIIPCNLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAG 212
Query: 236 DVAE-AFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH 294
D+A+ F I + + NVG ++ ++ D I + T + +P
Sbjct: 213 DLADFIFYAIANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSG--TFKHDLTKPVGMK 270
Query: 295 RYFLDDQKLKRLGWKEKTPWEEGLKLTLEWY 325
+ +DD KL GW KT EGLK T++++
Sbjct: 271 QKLIDDNKLNAFGWSYKTDLTEGLKNTVQFF 301
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 146 (56.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 68/267 (25%), Positives = 113/267 (42%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPN------ 64
+ K LITG G GS++ L+K DYE+ + + + + A P
Sbjct: 45 RDKVALITGITGQDGSYLAEFLLKK--DYEVHGIIRRASTFNTTRIEHLYADPKAHKGGR 102
Query: 65 FKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEA 123
K GD+T + + ++ I + AAQ+HV SF S E+T + GT +L+A
Sbjct: 103 MKLHYGDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLS-EYTAEVDAVGTLRILDA 161
Query: 124 CKLTGQVK--RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHR 181
+ G K RF ST E+YG+ +E+ E + P +PY+ K +V+ Y
Sbjct: 162 IRTCGMEKNVRFYQASTSELYGKV-VETP--QNEQTPFYPRSPYACAKMYGFWIVINYRE 218
Query: 182 SYGLPT----ITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237
+Y + + + G N K+ + K + GN + R + + +D
Sbjct: 219 AYNMYACNGILFNHESPRRGENFVTRKITRSVAKIYHKQMEYFELGNLDSKRDWGHASDY 278
Query: 238 AEAFDVILHRGVIGHVYNVGTKKERSV 264
EA ++L R Y + T + SV
Sbjct: 279 VEAMWMMLQRESPSD-YVIATGETHSV 304
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 150 (57.9 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 75/325 (23%), Positives = 139/325 (42%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+L+TGA G+IGS + +L+ Y + A+D+ + S + HP + + + D+
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNK--GYHVKAVDRFYFGSDKLSQHP-----HLELINEDVR- 57
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ--VKR 132
L L + +D ++ AA ++ D S G+ FE I +++ L Q VKR
Sbjct: 58 -RLQPSLFTN--VDYVIDLAAVSN-DPS-GDIFEKATWEI-NHQARVQSATLAKQQKVKR 111
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
+I S+ +YG D E ++ P Y+ AE ++ T+ +
Sbjct: 112 YILPSSCSIYGFQKGAVD----ETAKTNPLTTYAKANEKAEKEILPLATDDFTVTVMRQA 167
Query: 193 NNV-YGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--- 248
Y P + I + A + + +P+ +G+ R ++ D + ++L
Sbjct: 168 TVYGYSPRMRFDLAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASE 227
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLF---KLEPEKTIHYVQDRPFNDHR-YFLDDQKLK 304
+ G + NVG +++ L + KL+ + I + D P DHR Y++ K+K
Sbjct: 228 INGQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGD-P--DHRSYYVSFDKIK 284
Query: 305 R-LGWKEKTPWEEGLKLTLEWYKKN 328
R L W+ + +G +E K N
Sbjct: 285 RILNWQPQWDAAKGAVELIEKLKNN 309
Score = 37 (18.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 320 LTLEWYKKNPHW 331
+TL WY++ W
Sbjct: 318 ITLNWYQELEKW 329
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 150 (57.9 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 75/325 (23%), Positives = 139/325 (42%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+L+TGA G+IGS + +L+ Y + A+D+ + S + HP + + + D+
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNK--GYHVKAVDRFYFGSDKLSQHP-----HLELINEDVR- 57
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ--VKR 132
L L + +D ++ AA ++ D S G+ FE I +++ L Q VKR
Sbjct: 58 -RLQPSLFTN--VDYVIDLAAVSN-DPS-GDIFEKATWEI-NHQARVQSATLAKQQKVKR 111
Query: 133 FIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRG 192
+I S+ +YG D E ++ P Y+ AE ++ T+ +
Sbjct: 112 YILPSSCSIYGFQKGAVD----ETAKTNPLTTYAKANEKAEKEILPLATDDFTVTVMRQA 167
Query: 193 NNV-YGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRG--- 248
Y P + I + A + + +P+ +G+ R ++ D + ++L
Sbjct: 168 TVYGYSPRMRFDLAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASE 227
Query: 249 VIGHVYNVGTKKERSVLDVAADICTLF---KLEPEKTIHYVQDRPFNDHR-YFLDDQKLK 304
+ G + NVG +++ L + KL+ + I + D P DHR Y++ K+K
Sbjct: 228 INGQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGD-P--DHRSYYVSFDKIK 284
Query: 305 R-LGWKEKTPWEEGLKLTLEWYKKN 328
R L W+ + +G +E K N
Sbjct: 285 RILNWQPQWDAAKGAVELIEKLKNN 309
Score = 37 (18.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 320 LTLEWYKKNPHW 331
+TL WY++ W
Sbjct: 318 ITLNWYQELEKW 329
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 51/184 (27%), Positives = 83/184 (45%)
Query: 164 PYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGP--NQFPEK--LIPKFI-----LLAM 214
PY+ K L +Y+R YG + N+YGP N P +IP + A
Sbjct: 135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQ 194
Query: 215 KGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGH-VYNVGTKKERSVLDVAADI-C 272
+ + G+G+ +R +L+ D+A A +H + H V+ T+ S ++V + C
Sbjct: 195 NAPDVVVWGSGTPMREFLHVDDMAAAS---IHVMELAHEVWLENTQPMLSHINVGTGVDC 251
Query: 273 TLFKLEPE--KTIHY----VQD--RPFNDHRYFLDDQKLKRLGWKEKTPWEEGLKLTLEW 324
T+ +L K + Y V D +P R LD +L +LGW + E GL T +W
Sbjct: 252 TIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQW 311
Query: 325 YKKN 328
+ +N
Sbjct: 312 FLEN 315
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIV--ALDKLDYCSSLKNLHPSRAS 62
+++ I G G +GS + R ++ D E+V D+L+ S + +H AS
Sbjct: 4 QRVFIAGHRGMVGSAI-RRQLEQRGDVELVLRTRDELNLLDS-RAVHDFFAS 53
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 138 (53.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 59/191 (30%), Positives = 88/191 (46%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
L+TG GF+G HV L++ P E+ D L L+ L ++GD+T
Sbjct: 13 LVTGGCGFLGEHVVRMLLQQEPRLCELRVFD-LHLGPWLEELETGPVQVTA--IQGDVTQ 69
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN--NIYGTHVLLEACKLTGQVKR 132
A + + G ++H A V FG + T + N+ GT ++EAC G R
Sbjct: 70 AHEVAAAVA--GAHVVIHTAGLVDV---FGRASPETIHEVNVQGTQNVIEACVQNGT--R 122
Query: 133 F-IHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM-AYHRSY--GLPTI 188
F ++ S+ EV G T ++ EA+ +PY +KA AE LV+ A R GLP +
Sbjct: 123 FLVYTSSMEVVGPTTRGNENTPYEAAH---RHPYPRSKALAERLVLEANGRKVRGGLPLV 179
Query: 189 TT--RGNNVYG 197
T R +YG
Sbjct: 180 TCALRPTGIYG 190
Score = 49 (22.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 300 DQKLKRLGWKEKTPWEEGLKLTLEW 324
D+ L+ G++ WEE T+ W
Sbjct: 330 DKALRHFGYEPLFSWEESRARTIRW 354
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 127 (49.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/171 (29%), Positives = 80/171 (46%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDY-EIVALDKL--DYCSSLKNLHPSRASPNFKFLKGDI 72
L+TG GF+G HV L++ P E+ D+ + LK P R + ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT-GPVRVTA----IQGDV 67
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN--NIYGTHVLLEACKLTGQV 130
T A + + G ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVA--GAHVVIHTAGLVDV---FGRASPKTIHEVNVQGTRNVIEACVQTGT- 121
Query: 131 KRF-IHVSTDEVYGETDMESDI--GNPEAS-QLLPTNPYSATKAGAEMLVM 177
RF ++ S+ EV G GN + + + +PY +KA AE LV+
Sbjct: 122 -RFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVL 171
>UNIPROTKB|Q5QP01 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AL359553 UniGene:Hs.654399 HGNC:HGNC:5218 GO:GO:0016853
IPI:IPI00642070 SMR:Q5QP01 STRING:Q5QP01 Ensembl:ENST00000433745
Uniprot:Q5QP01
Length = 195
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/193 (29%), Positives = 82/193 (42%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA G +G + L++ EI ALDK + + L+GDI
Sbjct: 6 LVTGAGGLLGQRIVRLLVEEKELKEIRALDKAFRPELREEFSKLQNRTKLTVLEGDILDE 65
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE--FTNNNIYGTHVLLEACKLTGQVKRF 133
+ + + ++H A V FG + N N+ GT +LLEAC + V F
Sbjct: 66 PFLKR--ACQDVSVVIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVPVF 119
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLL----PTNPYSATKAGAEMLVMA---YHRSYG-- 184
I+ S+ EV G + I N + L PT PY +K AE V+A ++ G
Sbjct: 120 IYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPT-PYPYSKKLAEKAVLAANGWNLKNGDT 178
Query: 185 LPTITTRGNNVYG 197
L T R +YG
Sbjct: 179 LYTCALRPTYIYG 191
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 49 YCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE 108
Y ++ ++H +P +F GD+ C Y + +G+ T+ H A+ N N
Sbjct: 51 YTVNVFDIHQGFDNPRVQFFIGDL-CNQQDLYPAL-KGVSTVFHCASPPPYSN---NKEL 105
Query: 109 FTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSA 167
F N GT ++E C+ G K + S V+ D+++ + P A + P + Y+
Sbjct: 106 FYRVNFIGTKTVIETCREAGVQKLILTSSASVVFEGVDIKNGTEDLPYAMK--PIDYYTE 163
Query: 168 TKAGAEMLVM-AYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226
TK E V+ A T R + ++GP P+ L+P I A KG+ + GNG
Sbjct: 164 TKILQERAVLDANDPKKNFLTAAIRPHGIFGPRD-PQ-LVPILIDAARKGKMKFMIGNGE 221
Query: 227 NVRSYLYCADV 237
N+ + + +V
Sbjct: 222 NLVDFTFVENV 232
>UNIPROTKB|P14060 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006703 "estrogen biosynthetic process"
evidence=TAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0030868 "smooth endoplasmic
reticulum membrane" evidence=ISS] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic
process" evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic
process" evidence=TAS] [GO:0008202 "steroid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 EMBL:M27137
EMBL:M28392 EMBL:M28162 EMBL:M28391 EMBL:X53321 EMBL:M35493
EMBL:M63397 EMBL:M63395 EMBL:M63396 EMBL:M38180 EMBL:X55997
EMBL:S45679 EMBL:AK291556 EMBL:BC031999 IPI:IPI00843838 PIR:A36551
RefSeq:NP_000853.1 UniGene:Hs.364941 ProteinModelPortal:P14060
SMR:P14060 STRING:P14060 PhosphoSite:P14060 DMDM:112767
PRIDE:P14060 DNASU:3283 Ensembl:ENST00000369413
Ensembl:ENST00000528909 GeneID:3283 KEGG:hsa:3283 UCSC:uc001ehv.1
CTD:3283 GeneCards:GC01P120049 H-InvDB:HIX0028579 HGNC:HGNC:5217
MIM:109715 neXtProt:NX_P14060 PharmGKB:PA29486 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 InParanoid:P14060 KO:K00070
OrthoDB:EOG4K3KWG PhylomeDB:P14060 BioCyc:MetaCyc:HS08829-MONOMER
BRENDA:1.1.1.145 Reactome:REACT_15493 SABIO-RK:P14060
BindingDB:P14060 ChEMBL:CHEMBL1958 DrugBank:DB00157
DrugBank:DB01108 GenomeRNAi:3283 NextBio:13031 ArrayExpress:P14060
Bgee:P14060 CleanEx:HS_HSD3B1 Genevestigator:P14060
GermOnline:ENSG00000203857 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006703 GO:GO:0006704 GO:GO:0006705
GO:GO:0044281 Gene3D:3.40.50.720 Uniprot:P14060
Length = 373
Score = 135 (52.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 50/168 (29%), Positives = 71/168 (42%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L+K EI LDK + + L+GDI
Sbjct: 7 LVTGAGGFLGQRIIRLLVKEKELKEIRVLDKAFGPELREEFSKLQNKTKLTVLEGDILDE 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE--FTNNNIYGTHVLLEACKLTGQVKRF 133
+ + + I+H A V FG + N N+ GT +LLEAC + V F
Sbjct: 67 PFLKR--ACQDVSVIIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVPVF 120
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTN---PYSATKAGAEMLVMA 178
I+ S+ EV G + I N + L PY +K AE V+A
Sbjct: 121 IYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLA 168
Score = 52 (23.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 285 YVQDRPFNDHRYFLDD-------QKLKR-LGWKEKTPWEEGLKLTLEW 324
Y PFN H L + +K +R L +K WEE + T+EW
Sbjct: 309 YTYRPPFNRHIVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEW 356
>UNIPROTKB|P26439 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IDA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IDA] [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=NAS] [GO:0005783 "endoplasmic
reticulum" evidence=NAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic process"
evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic process"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451
HOVERGEN:HBG000014 KO:K00070 BRENDA:1.1.1.145 Reactome:REACT_15493
DrugBank:DB00157 DrugBank:DB01108 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006704 GO:GO:0006705 GO:GO:0044281
Gene3D:3.40.50.720 OMA:WVFPRIA EMBL:M77144 EMBL:M67466
EMBL:CR627415 EMBL:AK222997 EMBL:AL359553 EMBL:CH471122
EMBL:BC038419 EMBL:BC131488 EMBL:S80140 EMBL:S60309 EMBL:S60310
IPI:IPI00218494 IPI:IPI00465001 PIR:A39488 RefSeq:NP_000189.1
RefSeq:NP_001159592.1 UniGene:Hs.654399 ProteinModelPortal:P26439
SMR:P26439 STRING:P26439 PhosphoSite:P26439 DMDM:112770
PRIDE:P26439 DNASU:3284 Ensembl:ENST00000369416
Ensembl:ENST00000543831 GeneID:3284 KEGG:hsa:3284 UCSC:uc001ehs.3
UCSC:uc001ehu.3 CTD:3284 GeneCards:GC01P119957 HGNC:HGNC:5218
MIM:201810 MIM:613890 neXtProt:NX_P26439 Orphanet:90791
Orphanet:1331 Orphanet:3185 PharmGKB:PA29487 InParanoid:P26439
PhylomeDB:P26439 BioCyc:MetaCyc:HS10943-MONOMER BindingDB:P26439
ChEMBL:CHEMBL3670 GenomeRNAi:3284 NextBio:13035 ArrayExpress:P26439
Bgee:P26439 CleanEx:HS_HSD3B2 Genevestigator:P26439
GermOnline:ENSG00000203859 Uniprot:P26439
Length = 372
Score = 133 (51.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 56/193 (29%), Positives = 82/193 (42%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA G +G + L++ EI ALDK + + L+GDI
Sbjct: 6 LVTGAGGLLGQRIVRLLVEEKELKEIRALDKAFRPELREEFSKLQNRTKLTVLEGDILDE 65
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE--FTNNNIYGTHVLLEACKLTGQVKRF 133
+ + + ++H A V FG + N N+ GT +LLEAC + V F
Sbjct: 66 PFLKR--ACQDVSVVIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVPVF 119
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLL----PTNPYSATKAGAEMLVMA---YHRSYG-- 184
I+ S+ EV G + I N + L PT PY +K AE V+A ++ G
Sbjct: 120 IYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPT-PYPYSKKLAEKAVLAANGWNLKNGDT 178
Query: 185 LPTITTRGNNVYG 197
L T R +YG
Sbjct: 179 LYTCALRPTYIYG 191
Score = 54 (24.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 285 YVQDRPFNDHRYFLDD-------QKLKR-LGWKEKTPWEEGLKLTLEW 324
Y PFN H L + +K +R L +K WEE + T+EW
Sbjct: 308 YSYQPPFNRHTVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEW 355
>UNIPROTKB|Q5TDG2 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
UniGene:Hs.364941 HGNC:HGNC:5217 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GO:GO:0016853 EMBL:AL121995
IPI:IPI00246994 ProteinModelPortal:Q5TDG2 SMR:Q5TDG2 STRING:Q5TDG2
PRIDE:Q5TDG2 Ensembl:ENST00000235547 ArrayExpress:Q5TDG2
Bgee:Q5TDG2 Uniprot:Q5TDG2
Length = 375
Score = 135 (52.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 50/168 (29%), Positives = 71/168 (42%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L+K EI LDK + + L+GDI
Sbjct: 9 LVTGAGGFLGQRIIRLLVKEKELKEIRVLDKAFGPELREEFSKLQNKTKLTVLEGDILDE 68
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE--FTNNNIYGTHVLLEACKLTGQVKRF 133
+ + + I+H A V FG + N N+ GT +LLEAC + V F
Sbjct: 69 PFLKR--ACQDVSVIIHTACIIDV---FGVTHRESIMNVNVKGTQLLLEAC-VQASVPVF 122
Query: 134 IHVSTDEVYGETDMESDIGNPEASQLLPTN---PYSATKAGAEMLVMA 178
I+ S+ EV G + I N + L PY +K AE V+A
Sbjct: 123 IYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLA 170
Score = 52 (23.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 285 YVQDRPFNDHRYFLDD-------QKLKR-LGWKEKTPWEEGLKLTLEW 324
Y PFN H L + +K +R L +K WEE + T+EW
Sbjct: 311 YTYRPPFNRHIVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEW 358
>UNIPROTKB|Q9N119 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9823 "Sus scrofa" [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0006694 GeneTree:ENSGT00550000074557 EMBL:AF232699
RefSeq:NP_001004049.1 UniGene:Ssc.14393 ProteinModelPortal:Q9N119
STRING:Q9N119 Ensembl:ENSSSCT00000007360 Ensembl:ENSSSCT00000033231
Ensembl:ENSSSCT00000036493 GeneID:445539 KEGG:ssc:445539
SABIO-RK:Q9N119 ArrayExpress:Q9N119 Uniprot:Q9N119
Length = 373
Score = 145 (56.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 54/190 (28%), Positives = 78/190 (41%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TG GF+G + + L++ EI LDK+ + ++ L+GDI
Sbjct: 7 LVTGGGGFLGQRIVHLLLEEKDLQEIRVLDKVFKPEVREEFSKLQSKIKLTMLEGDILDE 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +G ++H A+ V N+ G N+ GT +LLEAC + V FIH
Sbjct: 67 QCLKG--ACQGASVVIHTASIIDVVNAVGRE-TVMKVNVKGTQLLLEAC-VQASVPVFIH 122
Query: 136 VSTDEVYGETDMESDIGNPEASQLLPTN---PYSATKAGAEMLVM-----AYHRSYGLPT 187
S+ EV G I N L T PY +K AE V+ A L T
Sbjct: 123 TSSIEVAGPNSYREVIQNACEEDRLETAWSAPYPLSKKLAEKAVLEANGWALQNGGTLHT 182
Query: 188 ITTRGNNVYG 197
R +YG
Sbjct: 183 CALRPMYIYG 192
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 285 YVQDRPFNDHRYFLDD-------QKLKR-LGWKEKTPWEEGLKLTLEW 324
Y PFN H L + +K +R LG++ WEE + T W
Sbjct: 309 YNYQPPFNRHFVTLCNSVFTVSYKKAQRDLGYEPLFTWEEAKQKTKAW 356
>UNIPROTKB|P14893 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9913 "Bos taurus" [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0031966 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:X17614 EMBL:BC111203
IPI:IPI00703764 PIR:S07102 RefSeq:NP_776768.1 UniGene:Bt.111390
ProteinModelPortal:P14893 STRING:P14893 PRIDE:P14893
Ensembl:ENSBTAT00000010992 GeneID:281824 KEGG:bta:281824
InParanoid:P14893 NextBio:20805734 Uniprot:P14893
Length = 373
Score = 140 (54.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 48/165 (29%), Positives = 72/165 (43%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TG GF+G + L++ EI LDK+ + ++ L+GDI
Sbjct: 7 LVTGGGGFLGQRIICLLVEEKDLQEIRVLDKVFRPEVREEFSKLQSKIKLTLLEGDILDE 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +G ++H A+ V N+ N N+ GT +LLEAC + V FIH
Sbjct: 67 QCLKG--ACQGTSVVIHTASVIDVRNAVPRE-TIMNVNVKGTQLLLEAC-VQASVPVFIH 122
Query: 136 VSTDEVYGETDMESDI--GNPEAS-QLLPTNPYSATKAGAEMLVM 177
ST EV G I G E + ++PY +K AE V+
Sbjct: 123 TSTIEVAGPNSYREIIQDGREEEHHESAWSSPYPYSKKLAEKAVL 167
Score = 46 (21.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEW 324
+K +R LG++ WEE + T EW
Sbjct: 332 KKAQRDLGYEPLYTWEEAKQKTKEW 356
>RGD|2838 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 5" species:10116 "Rattus norvegicus"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0005496 "steroid binding" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;IDA;TAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016229 "steroid dehydrogenase activity"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0042448 "progesterone metabolic process" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=IDA] [GO:0051287 "NAD binding" evidence=IDA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:2838 GO:GO:0043231 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 GO:GO:0051287 GO:GO:0005496
GeneTree:ENSGT00550000074557 CTD:15496 EMBL:M67465 EMBL:BC092571
IPI:IPI00231782 PIR:A37404 RefSeq:NP_036716.1 RefSeq:XP_003749408.1
UniGene:Rn.34902 ProteinModelPortal:P27364 STRING:P27364
PhosphoSite:P27364 PRIDE:P27364 Ensembl:ENSRNOT00000026290
GeneID:100911116 GeneID:24470 KEGG:rno:100911116 KEGG:rno:24470
UCSC:RGD:2838 InParanoid:P27364 BindingDB:P27364 ChEMBL:CHEMBL4490
NextBio:603409 Genevestigator:P27364 GermOnline:ENSRNOG00000019417
GO:GO:0042448 GO:GO:0050810 Uniprot:P27364
Length = 373
Score = 138 (53.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ E+ L + + L + L+GDI A
Sbjct: 7 LVTGAGGFLGQRIVQMLVQEKELQEVRVLYRTFSPKHKEELSKLQTKAKVTVLRGDIVDA 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+ +G+ I+H AA + + N+ GT +LL+AC + V FI+
Sbjct: 67 QFLRR--ACQGMSVIIHTAAALDIAGFLPRQ-TILDVNVKGTQLLLDAC-VEASVPAFIY 122
Query: 136 VSTDEVYGETDMESDIGNP---EASQLLPTNPYSATKAGAEMLVMAYHRS 182
S+ V G + I N E + +NPY +K AE V+A + S
Sbjct: 123 SSSTGVAGPNSYKETILNDREEEHRESTWSNPYPYSKRMAEKAVLAANGS 172
Score = 48 (22.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEW 324
+K +R LG++ WEE + T EW
Sbjct: 332 KKAQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|E2RC02 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070401 "NADP+ binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0005622 GO:GO:0070401 GO:GO:0019673
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:DAIRDWG EMBL:AAEX03017462 Ensembl:ENSCAFT00000014648
Uniprot:E2RC02
Length = 300
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 74/275 (26%), Positives = 121/275 (44%)
Query: 25 GSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P-SRASPNFKFLKGDITCADLMNY 80
GS++ L+ K Y + IV +++L+ P + N K GD+T + +
Sbjct: 7 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCL-V 65
Query: 81 LLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLTGQVK--RFIHV 136
+++E T I + AQ+HV SF + E+T + + GT LL+A K G + +F
Sbjct: 66 KIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVKTCGLINSVKFYQA 124
Query: 137 STDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVY 196
ST E+YG+ +I E + P +PY A K A +V+ + +Y L + N
Sbjct: 125 STSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHE 181
Query: 197 GPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADVAEAFDVILHRG---- 248
P + F + I + + GQ + GN R + + D EA ++L
Sbjct: 182 SPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPED 241
Query: 249 -VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
VI G V++V E+S L + I K E E
Sbjct: 242 FVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE 276
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 142 (55.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 59/194 (30%), Positives = 88/194 (45%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASP-NFKFLKGDITC 74
L+TG GF+G HV L++ P + + L L+ L + P ++GD+T
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEEL---KTGPVQVTAIQGDVTQ 69
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN--NIYGTHVLLEACKLTGQVKR 132
A + + G ++H A V FG + T + N+ GT ++EAC TG R
Sbjct: 70 AHEVAAAVA--GAHVVIHTAGLVDV---FGKTSPETIHEVNVQGTQNVIEACVQTGT--R 122
Query: 133 F-IHVSTDEVYGETDMESDI--GNPEAS-QLLPTNPYSATKAGAEMLVM-AYHRSY--GL 185
F I+ S+ EV G GN + + +PY +KA AE LV+ A R GL
Sbjct: 123 FLIYTSSMEVVGPNIKGQPFYRGNENTPYEAVHRHPYPCSKALAEQLVLEANGREVLGGL 182
Query: 186 PTITT--RGNNVYG 197
P +T R +YG
Sbjct: 183 PLVTCALRPTGIYG 196
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 300 DQKLKRLGWKEKTPWEEGLKLTLEW 324
D+ + G++ WEE T+ W
Sbjct: 336 DKARRHFGYEPLFSWEESRTRTIRW 360
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 142 (55.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 81/305 (26%), Positives = 136/305 (44%)
Query: 11 KPKKILITGAAGFIGSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--PSR------- 60
K K +ITG G GS++ L+ K Y + I+ +++L+ P
Sbjct: 20 KRKVAIITGITGQDGSYLAELLLAKGYEVHGILRRSSSFNTGRIEHLYHNPQTHTEGSIG 79
Query: 61 -ASPNFKFLKGDITCADLMNYLLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIYGT 117
+ K GD+T + + +++E T I + AQ+HV SF + E+T + + GT
Sbjct: 80 ATKDHMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGT 137
Query: 118 HVLLEA---CKLTGQVKRFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEM 174
LL+A C LT V RF ST E+YG+ +I E + P +PY A K A
Sbjct: 138 LRLLDAVKTCGLTDTV-RFYQASTSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYW 193
Query: 175 LVMAYHRSYGLPTITTRGNNVYGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVRS 230
+V+ + +Y L + N P + F + I + + GQ + GN ++R
Sbjct: 194 IVINFREAYNLFAVNGILFNHESPRRGSNFVTRKISRSVAKIHLGQLECFSLGNLDSMRD 253
Query: 231 YLYCADVAEAFDVILHRG-----VI--GHVYNVGTKKERSVLDVAADICTLFKLEPEKTI 283
+ + D EA ++L + VI G V++V ER+ V I +++ + EK +
Sbjct: 254 WGHAKDYVEAMWLMLQQEEPVDFVIATGEVHSVREFVERAFKHVGKTI--VWEGKDEKEV 311
Query: 284 HYVQD 288
Q+
Sbjct: 312 GRCQE 316
Score = 43 (20.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 299 DDQK-LKRLGWKEKTPWEEGLK 319
D K K LGWK + +EE +K
Sbjct: 340 DSSKAFKVLGWKPRVTFEELVK 361
>MGI|MGI:1921282 [details] [associations]
symbol:Sdr42e1 "short chain dehydrogenase/reductase family
42E, member 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006694 "steroid biosynthetic
process" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
MGI:MGI:1921282 GO:GO:0016021 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 CTD:93517 HOGENOM:HOG000168007
OrthoDB:EOG40ZQZ0 EMBL:AK014586 EMBL:BC018550 EMBL:BC038819
IPI:IPI00108565 RefSeq:NP_083001.1 UniGene:Mm.296302
ProteinModelPortal:Q9D665 SMR:Q9D665 PhosphoSite:Q9D665
PaxDb:Q9D665 PRIDE:Q9D665 Ensembl:ENSMUST00000037955
Ensembl:ENSMUST00000173522 GeneID:74032 KEGG:mmu:74032
UCSC:uc009npd.1 InParanoid:Q9D665 OMA:FYNFQPF NextBio:339586
Bgee:Q9D665 Genevestigator:Q9D665 Uniprot:Q9D665
Length = 394
Score = 136 (52.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 59/240 (24%), Positives = 103/240 (42%)
Query: 10 YKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLK 69
+ + +LITG G+ G + L N ++ D +NL P KF+
Sbjct: 6 FPEETVLITGGGGYFGFRLGCAL--NQKGARVILFD---ITQPAQNL-PE----GIKFVC 55
Query: 70 GDITC-ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTG 128
GDI C AD+ +E + + H A+ N + N+ GT +L AC G
Sbjct: 56 GDIRCLADVETAFQDAEKVACVFHVASYGMSGREQLNKTQIEEVNVGGTENILRACLERG 115
Query: 129 QVKRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM-----AYHR 181
V R ++ ST V G+ D P L + YS TK+ AE V+ A+ +
Sbjct: 116 -VPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEANGLAFKQ 174
Query: 182 SYG-LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
G L T R +YG + ++ +P+ + +G ++G+ ++ +++ ++A+A
Sbjct: 175 GDGILRTCAIRPAGIYGAGE--QRHLPRIVSYIERGLFRFVYGDPQSLVEFVHVDNLAKA 232
Score = 50 (22.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 296 YFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWG 333
YF ++ K LG+ E P++ L+ +EW+K + H G
Sbjct: 325 YFSLEKAKKELGF-EPQPFD--LQEVVEWFKAHGHGRG 359
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 75/292 (25%), Positives = 126/292 (43%)
Query: 11 KPKK--ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFL 68
KP++ +LI G GFIG+H++ RL+++ Y++ LD +++ L R+ PNF F+
Sbjct: 315 KPRRTRVLILGVNGFIGNHLSERLLRD-DKYDVYGLDIGS--DAIERL---RSHPNFHFV 368
Query: 69 KGDITC-ADLMNYLLVSEGIDTIMHFAA-QTHVDNSFGNSFEFTNNNIYGTHVLLEACKL 126
+GDI+ ++ + Y + + D ++ A T ++ + N + L+ C
Sbjct: 369 EGDISIHSEWIEYHI--KKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLKLVRYCVK 425
Query: 127 TGQVKRFIHVSTDEVYGET-DMESDIGNPEASQLL--PTNP----YSATKAGAEMLVMAY 179
KR I ST EVYG D D + S L+ P N YS +K + ++ AY
Sbjct: 426 YN--KRVIFPSTSEVYGMCQDKNFD---EDTSNLIVGPINKQRWIYSVSKQLLDRVIWAY 480
Query: 180 HRSYGLPTITTRGNNVYGPNQF--------PEKLIPKFILLAMKGQQLPIHGNGSNVRSY 231
GL R N GP + I + IL ++G + + G R +
Sbjct: 481 GAK-GLNFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCF 539
Query: 232 LYCADVAEAFDVILHRG---VIGHVYNVGTK-KERSVLDVAADICTLFKLEP 279
AD EA I+ G + N+G E S+ + ++ F+ P
Sbjct: 540 TDIADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGEELLRQFEAHP 591
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 74/275 (26%), Positives = 121/275 (44%)
Query: 25 GSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P-SRASPNFKFLKGDITCADLMNY 80
GS++ L+ K Y + IV +++L+ P + N K GD+T + +
Sbjct: 6 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCL-V 64
Query: 81 LLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLTGQVK--RFIHV 136
+++E T I + AQ+HV SF + E+T + + GT LL+A K G + +F
Sbjct: 65 KIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVKTCGLINSVKFYQA 123
Query: 137 STDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVY 196
ST E+YG+ +I E + P +PY A K A +V+ + +Y L + N
Sbjct: 124 STSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHE 180
Query: 197 GPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADVAEAFDVILHRG---- 248
P + F + I + + GQ + GN R + + D EA ++L
Sbjct: 181 SPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPED 240
Query: 249 -VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
VI G V++V E+S L + I K E E
Sbjct: 241 FVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE 275
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 74/275 (26%), Positives = 121/275 (44%)
Query: 25 GSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P-SRASPNFKFLKGDITCADLMNY 80
GS++ L+ K Y + IV +++L+ P + N K GD+T + +
Sbjct: 7 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCL-V 65
Query: 81 LLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEACKLTGQVK--RFIHV 136
+++E T I + AQ+HV SF + E+T + + GT LL+A K G + +F
Sbjct: 66 KIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVKTCGLINSVKFYQA 124
Query: 137 STDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVY 196
ST E+YG+ +I E + P +PY A K A +V+ + +Y L + N
Sbjct: 125 STSELYGKVQ---EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHE 181
Query: 197 GPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADVAEAFDVILHRG---- 248
P + F + I + + GQ + GN R + + D EA ++L
Sbjct: 182 SPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPED 241
Query: 249 -VI--GHVYNVGTKKERSVLDVAADICTLFKLEPE 280
VI G V++V E+S L + I K E E
Sbjct: 242 FVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE 276
>UNIPROTKB|I3L900 [details] [associations]
symbol:SDR42E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:FYNFQPF Ensembl:ENSSSCT00000025649
Uniprot:I3L900
Length = 390
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/235 (24%), Positives = 102/235 (43%)
Query: 12 PKK-ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPN-FKFLK 69
PK+ +LITG G+ G + L N ++ D SS P+ P KF++
Sbjct: 7 PKETVLITGGGGYFGFRLGCAL--NQKGLRVILFD----VSS-----PAHTIPEGVKFIR 55
Query: 70 GDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQ 129
GDI + + + H A+ N + N+ GT +L+AC+ G
Sbjct: 56 GDIRLLADVERAFEDADVTCVFHIASYGMSGREQLNRSRIEDVNVGGTDNVLQACRSRG- 114
Query: 130 VKRFIHVSTDEVY--GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVM-AYHRSYG-L 185
V R ++ ST V G+ D P L + YS TK+ AE V+ A ++ L
Sbjct: 115 VPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSVAEKKVLEANGKALAXL 174
Query: 186 PTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
T R +YGP + ++ +P+ + KG ++G+ ++ +++ ++ +A
Sbjct: 175 RTCALRPAGIYGPGE--QRHLPRIVSYLEKGLFRFVYGDPKSLVEFVHVDNLVQA 227
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 48/191 (25%), Positives = 86/191 (45%)
Query: 49 YCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE 108
Y ++ ++ +P +F GD+ C+ Y + +G++T+ H A+ N N
Sbjct: 62 YAVNVFDIQQGFDNPQVRFFLGDL-CSRQDLYPAL-KGVNTVFHCASPPPSSN---NKEL 116
Query: 109 FTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSA 167
F N GT ++E CK G K + S ++ D+++ + P A + P + Y+
Sbjct: 117 FYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNGTEDLPYAMK--PIDYYTE 174
Query: 168 TKAGAEMLVM-AYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226
TK E V+ A T R + ++GP P+ L+P I A G+ + GNG
Sbjct: 175 TKILQERAVLGANDPEKNFLTTAIRPHGIFGPRD-PQ-LVPILIEAARNGKMKFVIGNGK 232
Query: 227 NVRSYLYCADV 237
N+ + + +V
Sbjct: 233 NLVDFTFVENV 243
>ASPGD|ASPL0000064017 [details] [associations]
symbol:AN7575 species:162425 "Emericella nidulans"
[GO:0016125 "sterol metabolic process" evidence=RCA] [GO:0004769
"steroid delta-isomerase activity" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 EMBL:AACD01000129 EMBL:BN001304
KO:K07748 RefSeq:XP_680844.1 ProteinModelPortal:Q5AVV5
STRING:Q5AVV5 EnsemblFungi:CADANIAT00000683 GeneID:2869367
KEGG:ani:AN7575.2 OMA:NEDWPLI OrthoDB:EOG4J9R7N Uniprot:Q5AVV5
Length = 410
Score = 110 (43.8 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 48/190 (25%), Positives = 84/190 (44%)
Query: 63 PNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLE 122
P + +GD+T A+ M + D ++H A+ D + ++ N+ GT LLE
Sbjct: 81 PGADYYEGDLTSAESMLSVFRKVKPDVVIHTASAMLTDKNL--LYQL---NVEGTKTLLE 135
Query: 123 AC-----KLTGQVKRFIHVSTDEVYGETDMESDIGN-----PEASQLLPTNPYSATKAGA 172
G+ K F++ S+ V +T +SD+ N P L YS TKA A
Sbjct: 136 VAGGARGDWGGKCKAFVYTSSASVIHDT--QSDLLNVNEDWPLIRGKLQQEYYSDTKAEA 193
Query: 173 EMLVMAYHRSY--GLPTITTRGNNVYGPN--QFPEKLIPKFILLAMKGQQLPIHGNGSNV 228
E V+ Y+R + T R + +YG Q K++ + + +++ + G +N+
Sbjct: 194 EEAVLKYNRKSPSSMLTCALRPSGIYGEKDGQLIIKMLSHGVNASPTVRKMQL-GENNNL 252
Query: 229 RSYLYCADVA 238
+ Y +VA
Sbjct: 253 FDFTYVGNVA 262
Score = 66 (28.3 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYP 37
+L+ G GF+GSH+ ++L+ N+P
Sbjct: 13 VLVVGGCGFLGSHIVDQLL-NFP 34
Score = 49 (22.3 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 295 RYFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPHWWGDVTG 337
RY+ D+ RLG+ P +EGL + ++ + G+ G
Sbjct: 367 RYYSCDKAKDRLGYTPIVPLDEGLARAVGYFLERWRLEGEKKG 409
>TAIR|locus:2058223 [details] [associations]
symbol:AT2G43420 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISS] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA;ISS]
[GO:0016616 "oxidoreductase activity, acting on the CH-OH group of
donors, NAD or NADP as acceptor" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0016126 EMBL:AC002335 GO:GO:0047012 UniGene:At.12188
EMBL:DQ415280 EMBL:AK117930 EMBL:AY045841 IPI:IPI00543388
PIR:H84865 RefSeq:NP_565998.1 UniGene:At.59216
ProteinModelPortal:A9X4U2 SMR:A9X4U2 PaxDb:A9X4U2 PRIDE:A9X4U2
EnsemblPlants:AT2G43420.1 GeneID:818943 KEGG:ath:AT2G43420
TAIR:At2g43420 InParanoid:Q94AR9 OMA:HAHICAA PhylomeDB:A9X4U2
ProtClustDB:CLSN2688905 Genevestigator:A9X4U2 Uniprot:A9X4U2
Length = 561
Score = 137 (53.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 56/234 (23%), Positives = 104/234 (44%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK-----LDYCSSLKNLHPSRASPNFKF 67
K ++ G GFIG + +RL++ ++ + D LD SL L + +S +
Sbjct: 13 KTCVVLGGRGFIGRSLVSRLLR-LGNWTVRVADSGHTLHLDESDSL--LEDALSSGRASY 69
Query: 68 LKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLT 127
D+ D + V+EG + + A + + + ++ + GT ++ AC+ +
Sbjct: 70 HCVDVR--DKPQIVKVTEGSYVVFYMGATDLRSHDYFDCYKVI---VQGTRNVISACRES 124
Query: 128 GQVKRFIHVSTDEVYGETDMESDIGNPEASQLLP-TNPYSATKAGAEMLVMAYHRSYGLP 186
G V++ I+ ST +V + G+ + L + + KA AE L+ + GL
Sbjct: 125 G-VRKLIYNSTADVVFDGSQPIRDGDESLRRPLKFQSMLTDFKAQAEALIKLANNRDGLL 183
Query: 187 TITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
T R + V+GP + +P + LA G I G+G N+ + Y +V+ A
Sbjct: 184 TCALRSSIVFGPGD--TEFVPFLVNLAKSGYAKFILGSGENISDFTYSENVSHA 235
Score = 50 (22.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 304 KRLGWKEKTPWEEGLKLTLEWYKKN 328
K LG+ E+G+ TL+W+ ++
Sbjct: 333 KHLGYTPVVTLEDGIASTLQWFSRD 357
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 139 (54.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 69/254 (27%), Positives = 108/254 (42%)
Query: 90 IMHFAAQTHVDNSFGN---SFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETD 146
++H AA+ V F N EF NI +L CK VK +ST +T
Sbjct: 65 VIHLAAR--VGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVSCLSTCIFPDKTT 122
Query: 147 MESDIGNPEASQLLPTNP-YSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQ----F 201
D P+N Y+ K ++L AY+ YG + N+YGP+
Sbjct: 123 YPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDNYHLT 182
Query: 202 PEKLIPKFI---LLAMKGQQ-LPIHGNGSNVRSYLYCADVAEAFDVIL--HRGVIGHVYN 255
+IP I LAMK Q L I G G +R ++Y D+A+ F L + + + +
Sbjct: 183 DGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAKYFVWTLNNYEEMSPLILS 242
Query: 256 VGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKRLGWKEK-TPW 314
VG + E S+ DVA I + + K I + + ++ + KLK L TP
Sbjct: 243 VGEEDEISIADVARLITEAMEFKG-KLI-FDTSKADGQYKKTASNLKLKSLVPDLTFTPI 300
Query: 315 EEGLKLTLEWYKKN 328
++ +K + +W+ N
Sbjct: 301 QQAIKESCQWFIDN 314
Score = 39 (18.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 13 KKILITGAAGFIGSHV 28
+ +L+TG +G +G +
Sbjct: 8 RTVLVTGGSGLVGKGI 23
>MGI|MGI:104645 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 5" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:104645 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0005743 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:L41519 EMBL:BC012715
IPI:IPI00314189 PIR:A57559 RefSeq:NP_032321.2 UniGene:Mm.17910
ProteinModelPortal:Q61694 SMR:Q61694 STRING:Q61694
PhosphoSite:Q61694 PaxDb:Q61694 PRIDE:Q61694
Ensembl:ENSMUST00000044094 GeneID:15496 KEGG:mmu:15496
UCSC:uc008qpw.2 CTD:15496 InParanoid:Q61694 OMA:DACVEAS
NextBio:288382 Bgee:Q61694 Genevestigator:Q61694
GermOnline:ENSMUSG00000038092 GO:GO:0035634 Uniprot:Q61694
Length = 373
Score = 133 (51.9 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 48/167 (28%), Positives = 76/167 (45%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
L+TGA GF+G + L++ EI AL + + L + + LKGDI A
Sbjct: 7 LVTGAGGFLGQRIVRMLVQEEELQEIRALFRTFGRKHEEELSKLQTKAKVRVLKGDILDA 66
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE-FTNNNIYGTHVLLEACKLTGQVKRFI 134
+ +G+ ++H AA +D S + + N+ GT +LL+AC + V FI
Sbjct: 67 QCLKR--ACQGMSAVIHTAAA--IDPLGAASRQTILDVNLKGTQLLLDAC-VEASVPTFI 121
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPT---NPYSATKAGAEMLVMA 178
+ S+ V G + I N + + NPY +K AE V+A
Sbjct: 122 YSSSVLVAGPNSYKEIILNAHEEEHRESTWPNPYPYSKRMAEKAVLA 168
Score = 48 (22.0 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEW 324
+K +R LG++ WEE + T EW
Sbjct: 332 KKAQRDLGYQPLVSWEEAKQKTSEW 356
>TIGR_CMR|BA_1231 [details] [associations]
symbol:BA_1231 "dTDP-4-dehydrorhamnose reductase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=ISS]
[GO:0009243 "O antigen biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008831 GO:GO:0045226 KO:K00067
TIGRFAMs:TIGR01214 HOGENOM:HOG000227711 OMA:ETHWHAY
RefSeq:NP_843703.1 RefSeq:YP_017845.1 RefSeq:YP_027410.1 PDB:3SC6
PDBsum:3SC6 ProteinModelPortal:Q81TN9 IntAct:Q81TN9 DNASU:1087655
EnsemblBacteria:EBBACT00000012169 EnsemblBacteria:EBBACT00000017132
EnsemblBacteria:EBBACT00000023236 GeneID:1087655 GeneID:2817044
GeneID:2848637 KEGG:ban:BA_1231 KEGG:bar:GBAA_1231 KEGG:bat:BAS1138
ProtClustDB:CLSK916142 BioCyc:BANT260799:GJAJ-1214-MONOMER
BioCyc:BANT261594:GJ7F-1268-MONOMER Uniprot:Q81TN9
Length = 284
Score = 122 (48.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 58/238 (24%), Positives = 101/238 (42%)
Query: 90 IMHFAAQTHVDNSFGN-SFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDME 148
I+H AA T VD + + N I +V + A +L G + +++STD V+ + D
Sbjct: 57 IIHCAAYTKVDQAEKERDLAYVINAIGARNVAV-ASQLVGA--KLVYISTDYVF-QGDRP 112
Query: 149 SDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQFPEKLIPK 208
G E P N Y A+K E V H Y + R + +YG ++ +
Sbjct: 113 E--GYDEFHNPAPINIYGASKYAGEQFVKELHNKYFI----VRTSWLYG--KYGNNFVKT 164
Query: 209 FILLAMKGQQLPIHGNGSNVRSYLYCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVA 268
I L + +++ + + + S Y AD+ + ++H + G Y+V S + A
Sbjct: 165 MIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSLYG-TYHVSNTGSCSWFEFA 221
Query: 269 ADICTLFKLE----PEKTIHY--VQDRPFNDHRYFLDDQKLKRL-GWKEKTPWEEGLK 319
I + ++ P T + RP +Y + + RL G+ + WEEGL+
Sbjct: 222 KKIFSYANMKVNVLPVSTEEFGAAAARP----KYSIFQHNMLRLNGFLQMPSWEEGLE 275
Score = 55 (24.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVALDK 46
++++ITGA G +G + L N +Y+I DK
Sbjct: 3 ERVIITGANGQLGKQLQEEL--NPEEYDIYPFDK 34
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 140 (54.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 60/195 (30%), Positives = 90/195 (46%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDY-EIVALDKLDYCSSLKNLHPSRASP-NFKFLKGDIT 73
L+TG GF+G HV L++ P E+ D L + L+ L + P ++GD+T
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLLELRVFD-LHLGAWLEEL---KTGPVQVTAIQGDVT 68
Query: 74 CADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFT--NNNIYGTHVLLEACKLTGQVK 131
A + + G ++H A V FG + T N+ GT ++EAC TG
Sbjct: 69 QAHEVAAAVA--GAHVVIHTAGLVDV---FGRASPETIYEVNVQGTKNVIEACVQTGT-- 121
Query: 132 RF-IHVSTDEVYGETDMESDI--GNPEAS-QLLPTNPYSATKAGAEMLVM-AYHRSY--G 184
RF ++ S+ EV G GN + + + +PY +KA AE LV+ A R G
Sbjct: 122 RFLVYTSSMEVVGPNIKGHHFYRGNEDTPYEAVHRHPYPCSKAQAERLVLEANGRKVHGG 181
Query: 185 LPTITT--RGNNVYG 197
LP +T R +YG
Sbjct: 182 LPLVTCALRPTGIYG 196
Score = 40 (19.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 300 DQKLKRLGWKEKTPWEEGLKLTLEW 324
D+ + G++ WE+ T+ W
Sbjct: 336 DKARRHFGYEPLFSWEDSRTRTIRW 360
>ZFIN|ZDB-GENE-081105-30 [details] [associations]
symbol:hsd3b1 "hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase 1" species:7955
"Danio rerio" [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
ZFIN:ZDB-GENE-081105-30 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OMA:DACVEAS EMBL:BC074074
IPI:IPI00809590 UniGene:Dr.32164 ProteinModelPortal:Q6GMH6
STRING:Q6GMH6 InParanoid:Q6GMH6 Bgee:Q6GMH6 Uniprot:Q6GMH6
Length = 402
Score = 130 (50.8 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 55/193 (28%), Positives = 84/193 (43%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
++TGA GF+G + L+K EI LD+ +++L R +GDI
Sbjct: 37 VVTGACGFLGERLVRLLLKEEKLAEIRLLDRNIRSELIQSLDDCRGETKVSVFEGDIRNP 96
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+L+ +G + H A+ V + S E N+ T +LLE C + V FI+
Sbjct: 97 ELLRR--ACKGAALVFHTASLIDVIGAVEYS-ELYGVNVKATKLLLETC-IQENVPSFIY 152
Query: 136 VSTDEVYGETDMESDI--GN---PEASQLLPTNPYSATKAGAEMLVMAYHRSY----G-L 185
S+ EV G I GN P +S+L + YS TK AE + + + G L
Sbjct: 153 TSSIEVAGPNPSGEPIINGNEDTPYSSRLKFS--YSKTKKEAEEICLQANGDLLCNGGQL 210
Query: 186 PTITTRGNNVYGP 198
T R ++GP
Sbjct: 211 ATCALRPMYIFGP 223
Score = 52 (23.4 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 301 QKLKR-LGWKEKTPWEEGLKLTLEWY 325
QK R G+ + WEE K T +W+
Sbjct: 363 QKAHRDFGYTPRYEWEEARKCTTDWF 388
>POMBASE|SPAC513.07 [details] [associations]
symbol:SPAC513.07 "flavonol reductase/cinnamoyl-CoA
reductase family" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 PomBase:SPAC513.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0033554 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016491 GO:GO:0044237
OrthoDB:EOG480N5D HOGENOM:HOG000167998 HSSP:Q9UUN9 PIR:T38902
RefSeq:NP_593981.1 ProteinModelPortal:Q9UT59 PRIDE:Q9UT59
EnsemblFungi:SPAC513.07.1 GeneID:2543471 KEGG:spo:SPAC513.07
OMA:YDICTIN NextBio:20804483 Uniprot:Q9UT59
Length = 336
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 79/320 (24%), Positives = 131/320 (40%)
Query: 13 KKILITGAAGFIGSHVTNRLIKNYPDYEIVA-LDKLDYCSSLKNLHPS-RASPNFKFLKG 70
K +L+TG GFIG+HV +L++ Y + + ++ L L+P + F +K
Sbjct: 4 KLVLVTGVTGFIGAHVAEQLLQ--AGYRVRGTVRSMEKADELIRLNPGLKDKIEFVIVK- 60
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D++ ++ + +L + ++ I H A+ V+N N + + + GT +LEA + +
Sbjct: 61 DVSASNAFDGVL--KDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKSI 118
Query: 131 KRFIHVSTDEVYGETDM---------ESDIGNPEA-SQLLPTN----PYSATKAGAEMLV 176
KR + S+ G + E D NP + L T+ Y A+K AE
Sbjct: 119 KRIVITSSFAAVGNFQIDPHNNKVYTEKD-WNPITYEEALTTDNGIVAYCASKKLAEEAA 177
Query: 177 MAYHR----SYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYL 232
Y + SY + TI VYGP P K + +L I G+ Y
Sbjct: 178 REYVKEKKPSYDICTINPP--YVYGPPIHPMKNMDSLNTSNQIFWKL-IDGSKEATPFYY 234
Query: 233 YCADVAEAFDVILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLE-PEKTIHYVQDRPF 291
Y DV + + + N + V DIC + + E P K+ +
Sbjct: 235 YYVDVRDVAAAHVFALENAKLSNGRMLVSKGVF-TTGDICKVLRKEFPNKSDVIAEPVDI 293
Query: 292 N-DHRYF-LDDQKLKRLGWK 309
D +F LD+ K LG+K
Sbjct: 294 TVDPSFFKLDNSFSKSLGFK 313
>TIGR_CMR|SO_1745 [details] [associations]
symbol:SO_1745 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0016229 "steroid dehydrogenase activity"
evidence=ISS] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GO:GO:0016853 EMBL:AE014299 GenomeReviews:AE014299_GR
OMA:PQVTRYR ProtClustDB:CLSK906403 RefSeq:NP_717355.1
ProteinModelPortal:Q8EG63 GeneID:1169523 KEGG:son:SO_1745
PATRIC:23523115 BioCyc:MetaCyc:MONOMER-17300 Uniprot:Q8EG63
Length = 387
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 11 KPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKG 70
K +TGA GF+G + RLI ++ + Y L+ L ++G
Sbjct: 52 KVSHAFVTGAGGFLGKAICQRLIA--AGIKVTGFARGRYLE-LEAL-------GVTMVQG 101
Query: 71 DITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQV 130
D+ + + + +G D + H A++ V +G+ + N+ G ++ ACK ++
Sbjct: 102 DLVNPEQVKQAM--QGCDIVFHVASKAGV---WGDRDSYFCPNVKGAANVIAACKAL-KI 155
Query: 131 KRFIHVSTDEVYGETDMESDIGN--PEASQLLPTNPYSATKAGAEMLVMAYHRS------ 182
+ ++ ST V + ES I P AS+ L N Y+ +KA AE +++ ++S
Sbjct: 156 NKLVYTSTPSVTFAGEDESGINESTPYASRFL--NYYAHSKAIAEKMMLDANQSSSTNAA 213
Query: 183 YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
Y L T+ R + ++GPN P L+P+ + G+ L + G + +Y + A A
Sbjct: 214 YVLKTVALRPHLIWGPND-PH-LVPRVLARGRLGK-LKLVGREDKLVDTIYIDNAAYA 268
>UNIPROTKB|E1C6D8 [details] [associations]
symbol:SDR42E1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 CTD:93517 EMBL:AADN02032353
IPI:IPI00597762 RefSeq:XP_414167.1 UniGene:Gga.10919
ProteinModelPortal:E1C6D8 Ensembl:ENSGALT00000008756 GeneID:415806
KEGG:gga:415806 OMA:GLKMSKN NextBio:20819352 Uniprot:E1C6D8
Length = 391
Score = 137 (53.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 58/243 (23%), Positives = 108/243 (44%)
Query: 6 EPASYKPKKILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNF 65
E S + +LITG G+ G + + K D ++ D K L P
Sbjct: 2 EAGSSAKETVLITGGGGYFGFRLGCTIYKKGVD--VILFDVT------KPLQP--VPEGI 51
Query: 66 KFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACK 125
KF++G++ C + L + + + H A+ N + N+ GT +++ACK
Sbjct: 52 KFMQGNVCCLAEVEEAL--KDVICVFHIASYGMSGREQLNRKLIEDVNVKGTENVIQACK 109
Query: 126 LTGQVKRFIHVST-DEVYGETDMES-DIGNPEASQLLPTNPYSATKAGAEMLVM-AYHRS 182
TG V ++ ST + ++G +E+ D P L + YS TK+ AEM V+ A
Sbjct: 110 STG-VSSLVYTSTYNVIFGGQIIENGDESLPYLPLHLHPDHYSRTKSLAEMKVLKANGTE 168
Query: 183 YG-----LPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237
G L T R +YGP + ++ +P+ + +G ++G+ ++ +++ ++
Sbjct: 169 LGNGKGVLRTCALRPAGIYGPGE--QRHLPRIVSYIERGLFKFVYGDPLSLVEFVHVDNL 226
Query: 238 AEA 240
+A
Sbjct: 227 VQA 229
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 136 (52.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 73/267 (27%), Positives = 118/267 (44%)
Query: 25 GSHVTNRLI-KNYPDYEIVALDKLDYCSSLKNLH--P-SRASPNFKFLKGDITCADLMNY 80
GS++ L+ K Y + IV +++L+ P + N K GD+T + +
Sbjct: 14 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCL-V 72
Query: 81 LLVSEGIDT-IMHFAAQTHVDNSFGNSFEFTNN-NIYGTHVLLEA---CKLTGQVKRFIH 135
+++E T I + AQ+HV SF + E+T + + GT LL+A C L G V RF
Sbjct: 73 KIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVKTCGLIGSV-RFYQ 130
Query: 136 VSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNV 195
ST E+YG+ + E + P +PY A K A +V+ + +Y L + N
Sbjct: 131 ASTSELYGKVQ---ETPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187
Query: 196 YGPNQ---FPEKLIPKFILLAMKGQ-QLPIHGNGSNVRSYLYCADVAEAFDVILHRG--- 248
P + F + I + + GQ + GN R + + D EA ++L
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQSDEPE 247
Query: 249 --VI--GHVYNVGTKKERSVLDVAADI 271
VI G V++V E+S L + I
Sbjct: 248 DFVIATGEVHSVREFVEKSFLHIGKTI 274
>FB|FBgn0036698 [details] [associations]
symbol:CG7724 species:7227 "Drosophila melanogaster"
[GO:0016614 "oxidoreductase activity, acting on CH-OH group of
donors" evidence=ISS] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 KO:K00070 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:AY069197 RefSeq:NP_648957.1
UniGene:Dm.7711 SMR:Q9VVE3 IntAct:Q9VVE3 MINT:MINT-971239
EnsemblMetazoa:FBtr0075284 GeneID:39918 KEGG:dme:Dmel_CG7724
UCSC:CG7724-RA FlyBase:FBgn0036698 InParanoid:Q9VVE3
OrthoDB:EOG4Z34W5 GenomeRNAi:39918 NextBio:816080 Uniprot:Q9VVE3
Length = 398
Score = 137 (53.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 80/320 (25%), Positives = 131/320 (40%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+L+TG +GF+G H+ +L++ + I + LD N+ S ++ DI
Sbjct: 9 LLVTGGSGFLGQHLIKQLLERKEELGIKEIRSLDIVPYKNNIGHEETSLLRTYV-ADIG- 66
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
DL + G+D + H AA ++ N E N+ GT +++ C + VKR +
Sbjct: 67 GDLKALSPIFNGVDGVFHCAASVKIEYP-PNYEELERVNVNGTLAVVDLC-IQNNVKRLV 124
Query: 135 HVSTDEVY-----GETDMESDIGNPEASQLLPTNPYSAT-KAGAEMLVMAYHRSYGLPTI 188
+ S V G + + I + E+ PT S + + L+ Y S
Sbjct: 125 YTSCTSVCFVPFKGRSTFSAVINSTESKTDTPTLDSSTLWEQDNQFLIPGYASS------ 178
Query: 189 TTRGNN-VYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCAD--VAEAFDVIL 245
R N V N P ++ LA + P+ +Y C + E FD +
Sbjct: 179 KLRAENIVLNSNGAPLHNQKEY--LATSAMRAPL--------TYGECDSHFITEIFDFLS 228
Query: 246 HRG-VIGHVYNVGTKKERSVL-DVA-ADICTLFKLE-PEKTIH----YV-QDRPFNDHRY 296
RG V + VG K++ +VA IC L+ +K ++ +V D ND
Sbjct: 229 TRGWVFPRIAGVGGKQQLVYAGNVAWGHICAYKALKVSDKAVNGLPVFVTDDTGINDVSR 288
Query: 297 FLDDQKLKRLG--WKEKTPW 314
F+ QK+ LG +K KT W
Sbjct: 289 FV--QKMAVLGERFKVKTSW 306
>RGD|1359337 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005811
"lipid particle" evidence=IEA;ISO] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008203 "cholesterol
metabolic process" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA;ISO] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 RGD:1359337 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 KO:K07748 GO:GO:0047012 CTD:50814 HOVERGEN:HBG054675
OrthoDB:EOG4NKBVW EMBL:BC087626 IPI:IPI00360954
RefSeq:NP_001009399.1 UniGene:Rn.23620 ProteinModelPortal:Q5PPL3
STRING:Q5PPL3 PRIDE:Q5PPL3 Ensembl:ENSRNOT00000022985 GeneID:309262
KEGG:rno:309262 InParanoid:Q5PPL3 SABIO-RK:Q5PPL3 NextBio:660517
Genevestigator:Q5PPL3 Uniprot:Q5PPL3
Length = 362
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 50/178 (28%), Positives = 81/178 (45%)
Query: 62 SPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL 121
+P +F GD+ C Y + +G+ T+ H A+ NS N F N GT ++
Sbjct: 64 NPRVQFFIGDL-CNQQDLYPAL-KGVSTVFHCASPP--SNS-NNKELFYRVNSTGTKTVI 118
Query: 122 EACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSATKAGAEMLVM-AY 179
E CK G K + S V+ D+++ + P A + P + Y+ TK E V+ A
Sbjct: 119 ETCKEAGVQKLILTSSASVVFEGVDIKNGTEDLPYAMK--PIDYYTETKILQERAVLDAN 176
Query: 180 HRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237
T R + ++GP P+ L+P I A KG+ + GNG N+ + + +V
Sbjct: 177 DPKKNFLTAAIRPHGIFGPRD-PQ-LVPVLIDAARKGKMKFMIGNGKNLVDFTFVENV 232
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 142 (55.0 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 60/196 (30%), Positives = 91/196 (46%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDY-EIVALDKL--DYCSSLKNLHPSRASPNFKFLKGDI 72
L+TG GF+G HV L++ P E+ D+ + LK P R + ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT-GPVRVTA----IQGDV 67
Query: 73 TCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNN--NIYGTHVLLEACKLTGQV 130
T A + + G ++H A V FG + T + N+ GT ++EAC TG
Sbjct: 68 TQAHEVAAAVA--GAHVVIHTAGLVDV---FGRASPKTIHEVNVQGTRNVIEACVQTGT- 121
Query: 131 KRF-IHVSTDEVYGETDMESDI--GNPEAS-QLLPTNPYSATKAGAEMLVM-AYHRSY-- 183
RF ++ S+ EV G GN + + + +PY +KA AE LV+ A R
Sbjct: 122 -RFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKVRG 180
Query: 184 GLPTITT--RGNNVYG 197
GLP +T R +YG
Sbjct: 181 GLPLVTCALRPTGIYG 196
Score = 37 (18.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 300 DQKLKRLGWKEKTPWEEGLKLTLEW 324
D+ + G++ WE+ T+ W
Sbjct: 336 DKAQRHFGYEPLFSWEDSRTRTILW 360
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 121 (47.7 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 51/196 (26%), Positives = 84/196 (42%)
Query: 44 LDKLDYCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSF 103
LDK Y ++ ++ +F GD+ + + L + + H A+ S
Sbjct: 30 LDK-GYSVNVFDIQKRFDHDRVQFFLGDLCNKEAL--LPALQDVSVAFHCASPAP---SS 83
Query: 104 GNSFEFTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPT 162
N F N GT ++EACK G K + S V+ TD+++ + P A + P
Sbjct: 84 DNKELFYKVNFMGTKAVIEACKEAGVQKLVLTSSASVVFEGTDIKNGTEDLPYAKK--PI 141
Query: 163 NPYSATKAGAEMLVM-AYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPI 221
+ Y+ TK E V+ A T R + ++GP P+ L+P I A G+ I
Sbjct: 142 DYYTETKILQEKEVLSANDPDNNFFTTAIRPHGIFGPRD-PQ-LVPILIQAAKSGKMKFI 199
Query: 222 HGNGSNVRSYLYCADV 237
G+G N+ + Y +V
Sbjct: 200 IGDGKNLVDFTYVENV 215
Score = 59 (25.8 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 13 KKILITGAAGFIGSHVTNRLI-KNY 36
KK ++ G +GF+G H+ +L+ K Y
Sbjct: 10 KKCVVIGGSGFLGQHMVEKLLDKGY 34
Score = 37 (18.1 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 296 YFLDDQKLKRLGWKEKTPWEEGLKLTLEWYKKNPH 330
Y+ ++ + +G+K +E + TL+ Y PH
Sbjct: 309 YYSCERAKRDMGYKPVVSLDEAIDRTLQSY---PH 340
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 134 (52.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 77/292 (26%), Positives = 118/292 (40%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
I++TG AG IGS++ L + +I+ +D L KNL + + ++ D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGIT-DILVVDHLKNGRKFKNLVDLQIAD---YMDRD--- 54
Query: 75 ADLMNYLLVSEG---IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
D + ++ + ID I H A + + + NN Y LL C L ++
Sbjct: 55 -DFLAQIMAGDDFGFIDAIFHEGACS-ATTEWDGKYVMLNNYEYSKE-LLHYC-LDREIP 110
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG---AEMLVMAYHRSYGLPTI 188
F++ S+ YGETD + I P+ L YS + + + A L I
Sbjct: 111 -FLYASSAATYGETD--TFIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETLSQI 167
Query: 189 TT-RGNNVYGPNQFPEKLIPK--FILLAMK--GQQLPIHGNGSNV-RSYLYCADVAEAFD 242
T R NVYGP + + + F L G+ + N R ++Y DVA
Sbjct: 168 TGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNL 227
Query: 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH 294
L GV G ++N GT K S +VA + +TI PF DH
Sbjct: 228 WFLDHGVSG-IFNCGTGKAESFNEVAKAVIAFHGRGEVETI------PFPDH 272
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 134 (52.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 77/292 (26%), Positives = 118/292 (40%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
I++TG AG IGS++ L + +I+ +D L KNL + + ++ D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGIT-DILVVDHLKNGRKFKNLVDLQIAD---YMDRD--- 54
Query: 75 ADLMNYLLVSEG---IDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVK 131
D + ++ + ID I H A + + + NN Y LL C L ++
Sbjct: 55 -DFLAQIMAGDDFGFIDAIFHEGACS-ATTEWDGKYVMLNNYEYSKE-LLHYC-LDREIP 110
Query: 132 RFIHVSTDEVYGETDMESDIGNPEASQLLPTNPYSATKAG---AEMLVMAYHRSYGLPTI 188
F++ S+ YGETD + I P+ L YS + + + A L I
Sbjct: 111 -FLYASSAATYGETD--TFIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETLSQI 167
Query: 189 TT-RGNNVYGPNQFPEKLIPK--FILLAMK--GQQLPIHGNGSNV-RSYLYCADVAEAFD 242
T R NVYGP + + + F L G+ + N R ++Y DVA
Sbjct: 168 TGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNL 227
Query: 243 VILHRGVIGHVYNVGTKKERSVLDVAADICTLFKLEPEKTIHYVQDRPFNDH 294
L GV G ++N GT K S +VA + +TI PF DH
Sbjct: 228 WFLDHGVSG-IFNCGTGKAESFNEVAKAVIAFHGRGEVETI------PFPDH 272
>ZFIN|ZDB-GENE-030828-2 [details] [associations]
symbol:hsd3b2 "hydroxy-delta-5-steroid dehydrogenase,
3 beta- and steroid delta-isomerase 2" species:7955 "Danio rerio"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;IMP] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
ZFIN:ZDB-GENE-030828-2 CTD:3283 HOVERGEN:HBG000014 KO:K00070
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AY279108 IPI:IPI00500056 RefSeq:NP_997962.1 UniGene:Dr.119436
ProteinModelPortal:Q7ZZC3 STRING:Q7ZZC3 GeneID:373131
KEGG:dre:373131 InParanoid:Q7ZZC3 NextBio:20813390
ArrayExpress:Q7ZZC3 Uniprot:Q7ZZC3
Length = 374
Score = 135 (52.6 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 53/193 (27%), Positives = 83/193 (43%)
Query: 16 LITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITCA 75
++TGA GF+G + L++ EI LD+ ++ L R ++GDI
Sbjct: 9 VVTGACGFLGEKLVRLLLEEENLSEIRLLDRNIRSELIQTLEDGRGETKVSVIEGDIRDR 68
Query: 76 DLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFIH 135
+L+ +G + H A+ + + S E N+ T +LLE C + V FI+
Sbjct: 69 ELLRR--ACKGATLVFHTASLIDYNGAVEYS-ELHAVNVKATRLLLETC-IQQSVSSFIY 124
Query: 136 VSTDEVY-----GETDMESDIGNPEASQLLPTNPYSATKAGAEMLVMAYH----RSYG-L 185
S+ EV GE + P +S P + YS TK AE + + + R G L
Sbjct: 125 TSSIEVACPNRSGEPIINGHEDTPYSSY--PISNYSKTKQEAEQICLQANGELLRDGGHL 182
Query: 186 PTITTRGNNVYGP 198
T R +YGP
Sbjct: 183 ATCALRPMFIYGP 195
Score = 44 (20.5 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 304 KRLGWKEKTPWEEGLKLTLEW 324
+ G+ + WEE + T +W
Sbjct: 339 REFGYSPRYDWEEARRSTTDW 359
>DICTYBASE|DDB_G0278797 [details] [associations]
symbol:DDB_G0278797 species:44689 "Dictyostelium
discoideum" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
dictyBase:DDB_G0278797 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AAFI02000024 GO:GO:0044237
RefSeq:XP_641969.1 ProteinModelPortal:Q54XR1
EnsemblProtists:DDB0206198 GeneID:8621701 KEGG:ddi:DDB_G0278797
InParanoid:Q54XR1 OMA:TGFLGCN Uniprot:Q54XR1
Length = 410
Score = 136 (52.9 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 73/260 (28%), Positives = 113/260 (43%)
Query: 13 KKILITGAAGFIGSHVTNRL-IKNYPDYEIVA-LDK-LDYCSSLKNLHPSRASPNFKFLK 69
KK +TG+ GF+G ++ +L I+ Y Y + +K L+ S K L+ +K
Sbjct: 32 KKCFVTGSTGFLGCNIVEQLLIQGYQVYALYRNKNKVLELNSIAKRLNKQ---DQLILVK 88
Query: 70 GDITCADLMNYLLVSEGI-DTIM---HFAAQTHVDNSFGNS------FEFTNNNIYGTHV 119
GD+T NY + +GI D + H AA +D S + N+ GT
Sbjct: 89 GDVT-----NYKSLLKGIPDECLYCFHAAALIDLDASESQQSMKEQQIQQYETNVNGTAN 143
Query: 120 LLEACKLTGQVKRFIHVSTDEVYGETDMESDIGNPEA-SQLLPTNPYSATKAGAEMLVMA 178
++EAC G VKR I+ ST Y D++ I N + + LP + YS TK E+ V
Sbjct: 144 VVEACFKKG-VKRLIYTSTIACY---DVKDRIINEQCPKENLPRSGYSRTKRIGELYVED 199
Query: 179 YHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILL-AMKGQQLPIHGNGSNVRSYLYCADV 237
R GL + + G ++ E + FIL+ A + Q G G ++ +V
Sbjct: 200 AIRR-GLEAVIISPGFIIG--KYDENSVGSFILMVAHQASQTVSVGVGKT--NFSSADEV 254
Query: 238 AEAFDVILHRGVIGHVYNVG 257
A+A G Y +G
Sbjct: 255 AKAHITAAQVAPNGSDYCIG 274
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/191 (25%), Positives = 86/191 (45%)
Query: 49 YCSSLKNLHPSRASPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFE 108
Y ++ ++ +P +F GD+ C+ Y + +G++T+ H A+ N N
Sbjct: 62 YAVNVFDIQQGFDNPQVRFFLGDL-CSRQDLYPAL-KGVNTVFHCASPPPSSN---NKEL 116
Query: 109 FTNNNIYGTHVLLEACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSA 167
F N GT ++E CK G K + S ++ D+++ + P A + P + Y+
Sbjct: 117 FYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNGTEDLPYAMK--PIDYYTE 174
Query: 168 TKAGAEMLVM-AYHRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGS 226
TK E V+ A T R + ++GP P+ L+P I A G+ + GNG
Sbjct: 175 TKILQERAVLGANDPEKNFLTTAIRPHGIFGPRD-PQ-LVPILIEAARNGKMKFVIGNGK 232
Query: 227 NVRSYLYCADV 237
N+ + + +V
Sbjct: 233 NLVDFTFVENV 243
>POMBASE|SPBC3F6.02c [details] [associations]
symbol:SPBC3F6.02c "3 beta-hydroxysteroid
dehydrogenase/delta 5-->4-isomerase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000252 "C-3 sterol dehydrogenase
(C-4 sterol decarboxylase) activity" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006696 "ergosterol
biosynthetic process" evidence=ISO] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IEA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 PomBase:SPBC3F6.02c GO:GO:0005783
GO:GO:0005794 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006696 PIR:T40392
RefSeq:NP_596741.1 ProteinModelPortal:O43050 STRING:O43050
PRIDE:O43050 EnsemblFungi:SPBC3F6.02c.1 GeneID:2540634
KEGG:spo:SPBC3F6.02c KO:K07748 OMA:PQVTRYR OrthoDB:EOG4DNJD4
NextBio:20801759 GO:GO:0000252 GO:GO:0047012 Uniprot:O43050
Length = 340
Score = 119 (46.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 55/229 (24%), Positives = 97/229 (42%)
Query: 15 ILITGAAGFIGSHVTNRLIKNYPDYEIVALDKLDYCSSLKNLHPSRASPNFKFLKGDITC 74
+L+ G+ GF+G H+ +L + + I A D + L LH F GD+T
Sbjct: 6 VLVIGS-GFLGGHIIRQLCER-ENLRIAAFDLFENEKLLHELHGQ-----FTMYTGDLTK 58
Query: 75 ADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKLTGQVKRFI 134
+ + ++H A+ H + F N+ GT +++AC+ V +
Sbjct: 59 QGDIERVFEEFHPRVVIHTASPVH---NLARDIYF-EVNVDGTANIIKACQKFN-VDALV 113
Query: 135 HVSTDEVYGETDMESDIGNPEASQLLPT---NPYSATKAGAEMLVMAYHRSYGLPTITTR 191
+ S+ G +D+ N + SQ +P + Y+ +KA AE V+ S L T R
Sbjct: 114 YTSSA---GVVFNGADLINVDESQPIPEVHMDAYNESKALAEKQVLEAS-SESLKTAALR 169
Query: 192 GNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADVAEA 240
++GP +L+P + + GQ G+ N+ + Y + A A
Sbjct: 170 VAGLFGPGD--RQLVPGMLSVLKNGQTKFQLGDNLNLFDFTYIENAAYA 216
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/79 (36%), Positives = 36/79 (45%)
Query: 251 GHVYNVGTKKERSV---LDVAAD-ICTLFKLEPEKTIHYVQDRPFNDHRYFLDDQKLKR- 305
GHV K R V L AA+ +C K EP T VQ N RYF + QK +
Sbjct: 258 GHVPPYIIKFPRPVGMLLATAAEWVCYFLKKEPGFTRFRVQFSCAN--RYF-NIQKAEDV 314
Query: 306 LGWKEKTPWEEGLKLTLEW 324
L + EEG++ TL W
Sbjct: 315 LKYHPIVDLEEGIRRTLAW 333
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/178 (26%), Positives = 82/178 (46%)
Query: 62 SPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL 121
+P +F GD+ C+ Y + +G+ T+ H A+ N N F N GT ++
Sbjct: 63 NPRVQFFLGDL-CSQQDLYPAL-KGVSTVFHCASPPPSSN---NKELFYRVNYIGTKNVI 117
Query: 122 EACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSATKAGAEMLVM-AY 179
E CK G K + S ++ ++++ + P A + P + Y+ TK E V+ A
Sbjct: 118 ETCKEAGVQKLILTSSASVIFEGVNIKNGTEDLPYAMK--PIDYYTETKILQERAVLDAN 175
Query: 180 HRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237
T+ R + ++GP P+ L+P I A KG+ + GNG N+ + + +V
Sbjct: 176 DPKRNFLTMAIRPHGIFGPRD-PQ-LVPILIEAARKGKMKFMIGNGENLVDFTFVENV 231
>UNIPROTKB|F1S2D0 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0008203 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224
EMBL:CU468868 Ensembl:ENSSSCT00000013948 Uniprot:F1S2D0
Length = 361
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/178 (26%), Positives = 80/178 (44%)
Query: 62 SPNFKFLKGDITCADLMNYLLVSEGIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLL 121
+P +F GD+ C Y + +G+ T+ H A+ N N F N GT ++
Sbjct: 63 NPRVQFFLGDL-CNQQDLYPAL-KGVSTVFHCASPAPSSN---NKELFYRVNYIGTKNVI 117
Query: 122 EACKLTGQVKRFIHVSTDEVYGETDMESDIGN-PEASQLLPTNPYSATKAGAEMLVM-AY 179
E C+ G K + S ++ D+++ + P A + P + Y+ TK E V+ A
Sbjct: 118 ETCREAGVQKLILTSSASVIFEGVDIKNGTEDLPYAMK--PIDYYTETKILQEKTVLGAN 175
Query: 180 HRSYGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGQQLPIHGNGSNVRSYLYCADV 237
T R + ++GP P+ L+P I A KG+ + GNG N+ + + +V
Sbjct: 176 DPDKNFLTTAIRPHGIFGPRD-PQ-LVPILIEAARKGKMKFVIGNGKNLVDFTFVENV 231
WARNING: HSPs involving 45 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 684 684 0.00079 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 295
No. of states in DFA: 621 (66 KB)
Total size of DFA: 395 KB (2192 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.39u 0.10s 55.49t Elapsed: 00:00:02
Total cpu time: 55.44u 0.10s 55.54t Elapsed: 00:00:02
Start: Fri May 10 01:13:24 2013 End: Fri May 10 01:13:26 2013
WARNINGS ISSUED: 2