Query 035637
Match_columns 126
No_of_seqs 127 out of 405
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 07:38:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035637.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035637hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sxx_A Peroxisomal primary ami 99.2 1.2E-11 4.1E-16 111.6 5.9 53 69-124 14-66 (692)
2 1ksi_A Copper amine oxidase; P 99.1 3.8E-11 1.3E-15 107.4 5.8 47 77-124 2-48 (642)
3 3loy_A Copper amine oxidase; T 99.1 6.2E-11 2.1E-15 106.1 5.3 46 77-124 1-46 (633)
4 1spu_A Copper amine oxidase; o 99.1 1.3E-10 4.4E-15 105.0 5.6 53 70-124 86-138 (727)
5 1w6g_A Phenylethylamine oxidas 99.0 3.5E-10 1.2E-14 101.3 6.1 46 74-121 4-49 (646)
6 1w7c_A Lysyl oxidase; AMNE oxi 98.0 6.4E-06 2.2E-10 75.1 5.4 50 75-124 16-70 (747)
7 1tu5_A Copper amine oxidase, l 97.7 2.2E-05 7.5E-10 71.5 4.8 50 75-124 38-94 (746)
8 3pgb_A Putative uncharacterize 76.5 4 0.00014 37.8 5.8 49 76-124 64-119 (797)
9 3hi7_A Amiloride-sensitive ami 68.5 5.3 0.00018 36.5 4.6 47 78-124 11-64 (731)
10 3dp5_A OMCF, cytochrome C fami 30.2 31 0.0011 22.2 2.3 22 79-100 76-99 (99)
11 2d0s_A Cytochrome C, cytochrom 28.1 45 0.0015 19.9 2.7 19 79-97 59-77 (79)
12 1gks_A Cytochrome C551; haloph 23.1 57 0.002 19.7 2.5 18 81-98 60-77 (78)
13 1a56_A C-551, ferricytochrome 21.8 61 0.0021 19.4 2.4 19 79-97 61-79 (81)
14 2exv_A Cytochrome C-551; alpha 21.8 76 0.0026 18.8 2.8 16 82-97 65-80 (82)
15 3cu4_A Cytochrome C family pro 21.8 57 0.002 19.6 2.3 20 79-98 62-83 (85)
16 1ayg_A Cytochrome C-552; elect 20.3 84 0.0029 18.7 2.8 16 82-97 63-78 (80)
17 2zet_C Melanophilin; complex, 20.2 69 0.0024 23.5 2.7 28 72-99 5-33 (153)
18 1cc5_A Cytochrome C5; electron 20.1 68 0.0023 19.9 2.4 16 82-97 67-82 (83)
No 1
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A*
Probab=99.20 E-value=1.2e-11 Score=111.60 Aligned_cols=53 Identities=26% Similarity=0.396 Sum_probs=45.4
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCeeEEEEecCCCCChhhhh
Q 035637 69 HDHASDTPHHPLDPLTVKEINRVRTILTSHELFKNSFPYAFHSITLTQKITCPELE 124 (126)
Q Consensus 69 ~~~~~~~~~HPLDPLT~~EI~~A~~ILr~~~~~~~~~~~rF~~V~L~EP~K~evl~ 124 (126)
-+..+....|||||||++||++|++||+++++ +..++|++|+|+||+|++|++
T Consensus 14 ~~~~~~~~~HPLDpLs~~Ei~~a~~iv~~~~~---~~~~~F~~i~L~EP~K~~v~~ 66 (692)
T 3sxx_A 14 ASAAPARPAHPLDPLSTAEIKAATNTVKSYFA---GKKISFNTVTLREPARKAYIQ 66 (692)
T ss_dssp -CCSCCCCSSTTSCCCHHHHHHHHHHHHHHTT---TSCEEEEEEEEECCCHHHHHH
T ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHhhCC---CCCcEEEEEECCCCCHHHHHH
Confidence 33444556799999999999999999999876 478999999999999999985
No 2
>1ksi_A Copper amine oxidase; PEA seedling, oxidoreductase; HET: TPQ NAG; 2.20A {Pisum sativum} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w2z_A*
Probab=99.13 E-value=3.8e-11 Score=107.43 Aligned_cols=47 Identities=36% Similarity=0.441 Sum_probs=42.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCeeEEEEecCCCCChhhhh
Q 035637 77 HHPLDPLTVKEINRVRTILTSHELFKNSFPYAFHSITLTQKITCPELE 124 (126)
Q Consensus 77 ~HPLDPLT~~EI~~A~~ILr~~~~~~~~~~~rF~~V~L~EP~K~evl~ 124 (126)
.|||||||++||++|++||+++++++ +..++|++|+|+||+|++|++
T Consensus 2 ~HPldpLs~~Ei~~a~~iv~~~~~~~-~~~~~F~~i~L~EP~K~~v~~ 48 (642)
T 1ksi_A 2 QHPLDPLTKEEFLAVQTIVQNKYPIS-NNRLAFHYIGLDDPEKDHVLR 48 (642)
T ss_dssp CSTTCCCCHHHHHHHHHHHHHHSCTT-TCCEEEEEEEECCCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhcccCC-CCceEEEEEECCCCCHHHHHH
Confidence 59999999999999999999998753 457899999999999999985
No 3
>3loy_A Copper amine oxidase; TPQ, oxidoreductase; HET: TPQ TLA; 2.00A {Pichia angusta}
Probab=99.09 E-value=6.2e-11 Score=106.06 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=41.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCeeEEEEecCCCCChhhhh
Q 035637 77 HHPLDPLTVKEINRVRTILTSHELFKNSFPYAFHSITLTQKITCPELE 124 (126)
Q Consensus 77 ~HPLDPLT~~EI~~A~~ILr~~~~~~~~~~~rF~~V~L~EP~K~evl~ 124 (126)
-|||||||++||++|++||+++++. +..++|++|+|+||+|++|++
T Consensus 1 ~HPLdpLs~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~EP~K~~v~~ 46 (633)
T 3loy_A 1 VHPYDPISDAELQLTSQLIKDATKG--PERPHFIQIDRLDPPKKDMIR 46 (633)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHCCS--SSCEEEEEEEECCCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhhccC--CCCcEEEEEECCCCCHHHHHH
Confidence 3999999999999999999998762 368999999999999999985
No 4
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A*
Probab=99.05 E-value=1.3e-10 Score=105.02 Aligned_cols=53 Identities=23% Similarity=0.270 Sum_probs=46.4
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCeeEEEEecCCCCChhhhh
Q 035637 70 DHASDTPHHPLDPLTVKEINRVRTILTSHELFKNSFPYAFHSITLTQKITCPELE 124 (126)
Q Consensus 70 ~~~~~~~~HPLDPLT~~EI~~A~~ILr~~~~~~~~~~~rF~~V~L~EP~K~evl~ 124 (126)
.+++....|||||||++||++|++||+++..+ +++++|.+|+|+||+|++||+
T Consensus 86 T~~~~~~~HPLdpLs~~Ei~~a~~il~~~~~~--~~~~~F~~i~L~eP~K~~vl~ 138 (727)
T 1spu_A 86 TFQVEKRPHPLNALTADEIKQAVEIVKASADF--KPNTRFTEISLLPPDKEAVWA 138 (727)
T ss_dssp TEECCSSCCTTCCCCHHHHHHHHHHHHTSTTC--CTTCEEEEEEEECCCHHHHHH
T ss_pred EEeecccCCCCCcCCHHHHHHHHHHHHhcccC--CCCcEEEEEEecCCCHHHHHh
Confidence 35556678999999999999999999998765 468999999999999999985
No 5
>1w6g_A Phenylethylamine oxidase; copper containing, metal-binding, oxidoreductase, TPQ, quinone, holoenzyme; HET: TPQ GOL; 1.55A {Arthrobacter globiformis} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w6c_A* 1rjo_A* 2bt3_A* 2cfd_A* 2cfg_A* 2cfk_A* 2cfl_A* 2cfw_A* 2cg0_A* 2cg1_A* 1w4n_A* 1sih_A* 1sii_A* 1w5z_A* 3kii_A* 3kn4_A* 1iqy_A* 1avl_A* 1av4_A* 1iqx_A* ...
Probab=99.00 E-value=3.5e-10 Score=101.32 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=40.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCeeEEEEecCCCCChh
Q 035637 74 DTPHHPLDPLTVKEINRVRTILTSHELFKNSFPYAFHSITLTQKITCP 121 (126)
Q Consensus 74 ~~~~HPLDPLT~~EI~~A~~ILr~~~~~~~~~~~rF~~V~L~EP~K~e 121 (126)
....|||||||++||++|++||++++++ +..++|++|+|+||+|++
T Consensus 4 ~~~~HPldpLs~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~eP~K~~ 49 (646)
T 1w6g_A 4 IQTASPFRLASAGEISEVQGILRTAGLL--GPEKRIAYLGVLDPARGA 49 (646)
T ss_dssp ---CCTTCCCCHHHHHHHHHHHHHTTCC--CTTEEEEEEEECCCCSCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcccC--CCCcEEEEEEccCCchhh
Confidence 3456999999999999999999999876 468999999999999986
No 6
>1w7c_A Lysyl oxidase; AMNE oxidase, copper, oxidoreductase, quinoprotein, topaquinone enzyme, TPQ; HET: BMA NAG TPQ IMD; 1.23A {Pichia pastoris} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1rky_A* 1n9e_A*
Probab=97.97 E-value=6.4e-06 Score=75.05 Aligned_cols=50 Identities=14% Similarity=0.079 Sum_probs=40.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCCC--CCe---eEEEEecCCCCChhhhh
Q 035637 75 TPHHPLDPLTVKEINRVRTILTSHELFKNS--FPY---AFHSITLTQKITCPELE 124 (126)
Q Consensus 75 ~~~HPLDPLT~~EI~~A~~ILr~~~~~~~~--~~~---rF~~V~L~EP~K~evl~ 124 (126)
...||||+||++||++|+++|++...++.. ..+ .|.+|+|.||+|++||+
T Consensus 16 ~~~~p~~~Ls~~E~~aV~~~L~~~l~l~~~~~~~~~dN~i~~VeL~~P~K~~vL~ 70 (747)
T 1w7c_A 16 PKTNIWTSLAKEEVQEVLDLLHSTYNITEVTKADFFSNYVLWIETLKPNKTEALT 70 (747)
T ss_dssp SSCCTTCCCCHHHHHHHHHHHHHHSCCCCGGGCCTTSEEEEEEEEECCCHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhccCCCccccCccccceEEEEECcCCCHHHHHh
Confidence 346999999999999999999888324311 234 68999999999999985
No 7
>1tu5_A Copper amine oxidase, liver isozyme; oxidoreductase, quinoenzyme, TPQ; HET: TPQ NAG NDG; 2.37A {Bos taurus} PDB: 2pnc_A* 3ala_A* 2y73_A* 1pu4_A* 1us1_A* 2y74_A* 2c10_A* 2c11_A*
Probab=97.74 E-value=2.2e-05 Score=71.54 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=37.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcC---CCCCC----CCeeEEEEecCCCCChhhhh
Q 035637 75 TPHHPLDPLTVKEINRVRTILTSHE---LFKNS----FPYAFHSITLTQKITCPELE 124 (126)
Q Consensus 75 ~~~HPLDPLT~~EI~~A~~ILr~~~---~~~~~----~~~rF~~V~L~EP~K~evl~ 124 (126)
...||||+||++||++++++|.+.. +..+. .+-.+.+|+|.||+|++||+
T Consensus 38 ~~~~~~~~Ls~~E~~~V~~~L~~~~~l~L~~~~~a~~~dn~i~~IeL~~P~K~~vL~ 94 (746)
T 1tu5_A 38 DQSQLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAALA 94 (746)
T ss_dssp ---CCSSCCCHHHHHHHHHHHHHHHCSSCBCTTTCCTTSEEEEEEEEECCCHHHHHH
T ss_pred CCCCcCCCCCHHHHHHHHHHHhccCccCccccccCCccccEEEEEECCCCCHHHhhh
Confidence 4569999999999999999998775 22211 12457789999999999985
No 8
>3pgb_A Putative uncharacterized protein; oxidoreductase, copper amine oxidase, CAO, topaquinone, TPQ; HET: TPQ NAG BMA MAN; 2.45A {Emericella nidulans}
Probab=76.53 E-value=4 Score=37.78 Aligned_cols=49 Identities=14% Similarity=0.097 Sum_probs=37.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCC--CC-----CCeeEEEEecCCCCChhhhh
Q 035637 76 PHHPLDPLTVKEINRVRTILTSHELFK--NS-----FPYAFHSITLTQKITCPELE 124 (126)
Q Consensus 76 ~~HPLDPLT~~EI~~A~~ILr~~~~~~--~~-----~~~rF~~V~L~EP~K~evl~ 124 (126)
-..++..||++|+.++++.|.+...+. .. .+=..-.|+|.-|.|+++|+
T Consensus 64 ~~~vfadLs~~E~~aV~~~L~~~~~l~Lt~~~~a~~~dN~i~~iEl~~P~K~~vL~ 119 (797)
T 3pgb_A 64 KENVWYGLTDDETADVAKWLFGRPELNLTTTENAGEWDNTIALIELHRPNKSEAIP 119 (797)
T ss_dssp SCCSSSCCCHHHHHHHHHHHHTCTTTCCCCTTTCCSSSEEEEEEEEECCCHHHHHH
T ss_pred CCCcccccCHHHHHHHHHHHhcCCCCCCcccccCCccCCeEEEEEeeCCCHHHHHH
Confidence 458999999999999999998764321 01 12246779999999999986
No 9
>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, DIAM oxidase, DAO, human, glycoprotein, heparin-binding; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* 3k5t_A* 3mph_A*
Probab=68.53 E-value=5.3 Score=36.49 Aligned_cols=47 Identities=17% Similarity=0.139 Sum_probs=35.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCC--CCC-----CCeeEEEEecCCCCChhhhh
Q 035637 78 HPLDPLTVKEINRVRTILTSHELF--KNS-----FPYAFHSITLTQKITCPELE 124 (126)
Q Consensus 78 HPLDPLT~~EI~~A~~ILr~~~~~--~~~-----~~~rF~~V~L~EP~K~evl~ 124 (126)
-++..||++|+.++++.|.+...+ ... .+=..-.|+|.=|.|+++|+
T Consensus 11 ~vf~dLs~~E~~~V~~~L~~~~~l~Lt~~~~a~~~dN~i~~iEl~~P~K~~vL~ 64 (731)
T 3hi7_A 11 GVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHVLR 64 (731)
T ss_dssp GGGCCCCHHHHHHHHHHHHTCGGGCBCCTTSSCSSSEEEEEEEEECCCHHHHHH
T ss_pred CccccCCHHHHHHHHHHHhcCCCCCCcccccCCccCCeEEEEEecCCCchhhhh
Confidence 468999999999999999876322 111 12245679999999999986
No 10
>3dp5_A OMCF, cytochrome C family protein; C-type cytochrome, Fe SAD phasing, dissimilatory metal reduction, electron transport; HET: HEM; 1.86A {Geobacter sulfurreducens} SCOP: a.3.1.0
Probab=30.18 E-value=31 Score=22.17 Aligned_cols=22 Identities=0% Similarity=0.004 Sum_probs=17.8
Q ss_pred CCC--CCCHHHHHHHHHHHHhcCC
Q 035637 79 PLD--PLTVKEINRVRTILTSHEL 100 (126)
Q Consensus 79 PLD--PLT~~EI~~A~~ILr~~~~ 100 (126)
++. .||++||..+++.|+..++
T Consensus 76 ~~~~~~Lsd~ei~~l~~Yi~~~~p 99 (99)
T 3dp5_A 76 AFGEAMIPPADALKIGEYVVASFP 99 (99)
T ss_dssp CCCTTTSCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCc
Confidence 454 5999999999999987653
No 11
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=28.12 E-value=45 Score=19.89 Aligned_cols=19 Identities=11% Similarity=0.288 Sum_probs=15.7
Q ss_pred CCCCCCHHHHHHHHHHHHh
Q 035637 79 PLDPLTVKEINRVRTILTS 97 (126)
Q Consensus 79 PLDPLT~~EI~~A~~ILr~ 97 (126)
++..||++||...++.|+.
T Consensus 59 ~~~~Ls~~ei~~l~~yl~~ 77 (79)
T 2d0s_A 59 PHPQVAEADIEKIVRWVLT 77 (79)
T ss_dssp CCTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHh
Confidence 3568999999999988765
No 12
>1gks_A Cytochrome C551; halophilic purple phototrophic bacterium, electron transport; HET: HEM; NMR {Halorhodospira halophila} SCOP: a.3.1.1
Probab=23.06 E-value=57 Score=19.68 Aligned_cols=18 Identities=6% Similarity=0.067 Sum_probs=15.1
Q ss_pred CCCCHHHHHHHHHHHHhc
Q 035637 81 DPLTVKEINRVRTILTSH 98 (126)
Q Consensus 81 DPLT~~EI~~A~~ILr~~ 98 (126)
+.||++||..+++.|+..
T Consensus 60 ~~Lsd~ei~~l~~yi~~~ 77 (78)
T 1gks_A 60 GRADREDLVKAIEYMLST 77 (78)
T ss_dssp TTBCHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 469999999999988753
No 13
>1a56_A C-551, ferricytochrome C-552; hemoprotein, prokaryotic electron transport; HET: HEC; NMR {Nitrosomonas europaea} SCOP: a.3.1.1 PDB: 1a8c_A*
Probab=21.81 E-value=61 Score=19.36 Aligned_cols=19 Identities=5% Similarity=0.095 Sum_probs=15.6
Q ss_pred CCCCCCHHHHHHHHHHHHh
Q 035637 79 PLDPLTVKEINRVRTILTS 97 (126)
Q Consensus 79 PLDPLT~~EI~~A~~ILr~ 97 (126)
|++.||++||...++-|+.
T Consensus 61 ~~~~Ls~~ei~~l~~yl~~ 79 (81)
T 1a56_A 61 PNVNVSDADAKALADWILT 79 (81)
T ss_dssp SCCSSSSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHh
Confidence 3478999999999888764
No 14
>2exv_A Cytochrome C-551; alpha helix, heme C, electron transport; HET: HEC; 1.86A {Pseudomonas aeruginosa} PDB: 2pac_A* 351c_A* 451c_A* 1dvv_A*
Probab=21.80 E-value=76 Score=18.76 Aligned_cols=16 Identities=13% Similarity=0.142 Sum_probs=14.2
Q ss_pred CCCHHHHHHHHHHHHh
Q 035637 82 PLTVKEINRVRTILTS 97 (126)
Q Consensus 82 PLT~~EI~~A~~ILr~ 97 (126)
.||++||...++.|+.
T Consensus 65 ~ls~~ei~~l~~yl~~ 80 (82)
T 2exv_A 65 AVSDDEAQTLAKWVLS 80 (82)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh
Confidence 8999999999988875
No 15
>3cu4_A Cytochrome C family protein; monoheme cytochrome, electron transport; HET: HEM; 1.30A {Geobacter sulfurreducens}
Probab=21.75 E-value=57 Score=19.63 Aligned_cols=20 Identities=0% Similarity=0.107 Sum_probs=16.4
Q ss_pred CCC--CCCHHHHHHHHHHHHhc
Q 035637 79 PLD--PLTVKEINRVRTILTSH 98 (126)
Q Consensus 79 PLD--PLT~~EI~~A~~ILr~~ 98 (126)
++. .||++||..+++.|+..
T Consensus 62 ~~~~~~ls~~ei~~l~~yi~~~ 83 (85)
T 3cu4_A 62 AFGEAMIPPADALKIGEYVVAS 83 (85)
T ss_dssp CCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHh
Confidence 454 69999999999988764
No 16
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=20.30 E-value=84 Score=18.72 Aligned_cols=16 Identities=19% Similarity=0.175 Sum_probs=14.3
Q ss_pred CCCHHHHHHHHHHHHh
Q 035637 82 PLTVKEINRVRTILTS 97 (126)
Q Consensus 82 PLT~~EI~~A~~ILr~ 97 (126)
.||++||...++.|+.
T Consensus 63 ~Lsd~ei~~l~~yl~~ 78 (80)
T 1ayg_A 63 NVTDAEAKQLAQWILS 78 (80)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 8999999999988875
No 17
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=20.15 E-value=69 Score=23.45 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=18.7
Q ss_pred CCCCCCCC-CCCCCHHHHHHHHHHHHhcC
Q 035637 72 ASDTPHHP-LDPLTVKEINRVRTILTSHE 99 (126)
Q Consensus 72 ~~~~~~HP-LDPLT~~EI~~A~~ILr~~~ 99 (126)
++.|...| |..||++|-+..-+||.++.
T Consensus 5 ~~~m~~~~dLs~LteeEr~~Il~VL~Rd~ 33 (153)
T 2zet_C 5 SSGMGKRLDLSTLTDEEAEHVWAVVQRDF 33 (153)
T ss_dssp ------CCCCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCccCCCcccCCHHHHHHHHHHHHhHH
Confidence 34455555 88999999999999988764
No 18
>1cc5_A Cytochrome C5; electron transport (heme protein); HET: HEM; 2.50A {Azotobacter vinelandii} SCOP: a.3.1.1
Probab=20.15 E-value=68 Score=19.89 Aligned_cols=16 Identities=6% Similarity=0.059 Sum_probs=14.0
Q ss_pred CCCHHHHHHHHHHHHh
Q 035637 82 PLTVKEINRVRTILTS 97 (126)
Q Consensus 82 PLT~~EI~~A~~ILr~ 97 (126)
.||++||..+++.|+.
T Consensus 67 ~Lsd~ei~~v~~yi~~ 82 (83)
T 1cc5_A 67 DCSDDELKAAIGKMSG 82 (83)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHh
Confidence 5999999999988864
Done!