Query 035639
Match_columns 177
No_of_seqs 140 out of 1221
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:40:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035639.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035639hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hb9_A Similarities with proba 99.9 1.7E-24 5.9E-29 179.0 13.7 127 14-154 263-392 (412)
2 3rp8_A Flavoprotein monooxygen 99.9 1.6E-21 5.5E-26 162.6 14.0 129 13-159 252-381 (407)
3 2vou_A 2,6-dihydroxypyridine h 99.9 5.2E-21 1.8E-25 159.2 12.8 116 15-151 256-371 (397)
4 2xdo_A TETX2 protein; tetracyc 99.8 1.2E-20 4E-25 157.2 13.6 127 13-158 264-396 (398)
5 2x3n_A Probable FAD-dependent 99.8 5.5E-20 1.9E-24 152.7 10.8 123 21-157 245-368 (399)
6 3c4a_A Probable tryptophan hyd 99.8 6.7E-20 2.3E-24 151.8 8.4 115 14-151 219-334 (381)
7 3c96_A Flavin-containing monoo 99.8 5.2E-19 1.8E-23 147.7 10.6 105 19-143 260-367 (410)
8 1pn0_A Phenol 2-monooxygenase; 99.8 2.1E-18 7.3E-23 152.8 9.6 82 60-151 344-426 (665)
9 2qa2_A CABE, polyketide oxygen 99.7 4E-18 1.4E-22 146.5 8.9 81 60-150 272-352 (499)
10 2qa1_A PGAE, polyketide oxygen 99.7 5.7E-18 1.9E-22 145.5 9.8 81 60-150 271-351 (500)
11 3fmw_A Oxygenase; mithramycin, 99.7 4E-18 1.4E-22 148.7 7.9 84 60-153 316-399 (570)
12 3alj_A 2-methyl-3-hydroxypyrid 99.7 6E-19 2E-23 145.8 1.0 107 21-145 238-347 (379)
13 1k0i_A P-hydroxybenzoate hydro 99.7 5.6E-18 1.9E-22 140.2 6.4 79 60-149 273-351 (394)
14 2dkh_A 3-hydroxybenzoate hydro 99.7 8.2E-18 2.8E-22 148.4 7.1 77 65-151 341-417 (639)
15 2r0c_A REBC; flavin adenine di 99.7 7.5E-18 2.5E-22 146.2 5.8 81 60-150 303-383 (549)
16 3ihg_A RDME; flavoenzyme, anth 99.7 1.8E-17 6.1E-22 143.0 7.8 81 60-150 295-375 (535)
17 3ihm_A Styrene monooxygenase A 99.7 1.9E-16 6.7E-21 133.3 11.9 114 13-145 250-375 (430)
18 3e1t_A Halogenase; flavoprotei 99.6 1.3E-14 4.4E-19 124.7 10.4 118 21-148 251-369 (512)
19 3atr_A Conserved archaeal prot 99.5 4.6E-15 1.6E-19 125.5 6.2 81 61-150 277-357 (453)
20 3oz2_A Digeranylgeranylglycero 99.5 4E-14 1.4E-18 115.8 11.4 79 62-149 273-351 (397)
21 3cgv_A Geranylgeranyl reductas 99.5 3.8E-13 1.3E-17 110.6 13.2 81 61-150 272-352 (397)
22 2gmh_A Electron transfer flavo 99.4 4.1E-14 1.4E-18 123.6 4.7 91 61-159 342-437 (584)
23 3i3l_A Alkylhalidase CMLS; fla 99.4 1.9E-12 6.6E-17 113.3 11.1 110 21-145 268-378 (591)
24 2pyx_A Tryptophan halogenase; 99.3 1.4E-12 4.7E-17 112.4 6.4 69 61-141 340-408 (526)
25 2aqj_A Tryptophan halogenase, 99.3 1.6E-12 5.3E-17 112.3 5.0 68 61-141 325-392 (538)
26 2weu_A Tryptophan 5-halogenase 99.3 2.8E-12 9.6E-17 109.7 5.1 73 61-146 333-405 (511)
27 2e4g_A Tryptophan halogenase; 99.2 4.1E-12 1.4E-16 110.1 4.8 72 62-146 357-428 (550)
28 3nix_A Flavoprotein/dehydrogen 99.2 3.4E-11 1.1E-15 100.0 8.9 102 19-137 246-348 (421)
29 2bry_A NEDD9 interacting prote 98.8 2.6E-09 8.9E-14 91.5 4.9 64 59-137 386-451 (497)
30 3kkj_A Amine oxidase, flavin-c 97.3 0.00014 4.6E-09 54.3 3.6 37 64-106 293-329 (336)
31 1yvv_A Amine oxidase, flavin-c 96.1 0.0045 1.5E-07 49.0 4.1 35 65-105 294-328 (336)
32 4g6h_A Rotenone-insensitive NA 57.7 20 0.00069 30.1 6.0 37 64-103 363-399 (502)
33 3i6d_A Protoporphyrinogen oxid 49.1 17 0.00058 29.4 4.2 33 65-103 435-467 (470)
34 3f8d_A Thioredoxin reductase ( 48.7 26 0.00088 26.5 4.9 41 64-106 278-318 (323)
35 3vrd_B FCCB subunit, flavocyto 48.4 24 0.00081 28.1 4.8 40 65-107 286-326 (401)
36 3d1c_A Flavin-containing putat 46.5 26 0.0009 27.2 4.8 39 65-104 300-338 (369)
37 3h28_A Sulfide-quinone reducta 46.0 27 0.00093 28.2 4.9 44 64-107 285-335 (430)
38 2ywl_A Thioredoxin reductase r 44.1 35 0.0012 23.6 4.7 38 64-105 134-171 (180)
39 3sx6_A Sulfide-quinone reducta 43.2 28 0.00094 28.3 4.5 44 64-107 296-346 (437)
40 3cty_A Thioredoxin reductase; 42.6 36 0.0012 25.9 4.9 37 65-105 280-316 (319)
41 3nks_A Protoporphyrinogen oxid 39.2 27 0.00093 28.4 3.9 32 65-102 441-472 (477)
42 1vdc_A NTR, NADPH dependent th 38.8 38 0.0013 25.9 4.5 38 65-106 287-324 (333)
43 3fbs_A Oxidoreductase; structu 38.8 34 0.0012 25.4 4.2 37 64-105 256-292 (297)
44 3h8l_A NADH oxidase; membrane 38.7 32 0.0011 27.4 4.2 37 65-104 299-335 (409)
45 1trb_A Thioredoxin reductase; 38.5 42 0.0014 25.4 4.7 38 65-106 278-315 (320)
46 4dgk_A Phytoene dehydrogenase; 38.0 24 0.00082 29.0 3.4 35 66-105 458-492 (501)
47 3nrn_A Uncharacterized protein 37.3 27 0.00092 28.0 3.5 32 66-100 372-403 (421)
48 2q7v_A Thioredoxin reductase; 36.9 59 0.002 24.7 5.4 38 65-106 276-313 (325)
49 3lzw_A Ferredoxin--NADP reduct 36.7 34 0.0012 25.9 3.9 41 64-106 276-316 (332)
50 3hyw_A Sulfide-quinone reducta 36.5 47 0.0016 26.9 4.9 40 65-107 286-335 (430)
51 2gqw_A Ferredoxin reductase; f 35.4 22 0.00075 28.7 2.7 39 64-102 264-307 (408)
52 1b37_A Protein (polyamine oxid 35.2 45 0.0015 27.2 4.6 38 66-106 423-460 (472)
53 3r9u_A Thioredoxin reductase; 35.0 46 0.0016 25.0 4.4 38 64-105 275-312 (315)
54 2a87_A TRXR, TR, thioredoxin r 34.5 63 0.0022 24.8 5.2 38 65-106 280-317 (335)
55 3itj_A Thioredoxin reductase 1 34.5 40 0.0014 25.6 4.0 37 65-105 299-335 (338)
56 3kd9_A Coenzyme A disulfide re 32.8 35 0.0012 27.8 3.5 39 64-102 271-314 (449)
57 2cul_A Glucose-inhibited divis 31.7 44 0.0015 24.4 3.7 34 64-103 197-230 (232)
58 4a9w_A Monooxygenase; baeyer-v 31.7 51 0.0018 25.1 4.2 37 65-105 314-352 (357)
59 3ka7_A Oxidoreductase; structu 31.6 29 0.001 27.6 2.9 32 66-100 392-423 (425)
60 3lov_A Protoporphyrinogen oxid 31.4 43 0.0015 27.2 3.9 33 66-104 433-465 (475)
61 1sez_A Protoporphyrinogen oxid 31.1 50 0.0017 27.0 4.3 35 65-105 460-494 (504)
62 3fpz_A Thiazole biosynthetic e 30.6 16 0.00055 28.4 1.1 40 64-103 282-323 (326)
63 1q1r_A Putidaredoxin reductase 28.5 31 0.0011 28.0 2.6 38 65-102 276-318 (431)
64 2yg5_A Putrescine oxidase; oxi 28.4 57 0.0019 26.2 4.1 35 65-102 415-449 (453)
65 2zbw_A Thioredoxin reductase; 28.3 60 0.002 24.7 4.1 40 65-106 279-318 (335)
66 3ntd_A FAD-dependent pyridine 28.2 42 0.0014 28.1 3.3 39 64-102 294-337 (565)
67 3fg2_P Putative rubredoxin red 27.8 27 0.00093 28.0 2.0 39 64-102 266-309 (404)
68 2bc0_A NADH oxidase; flavoprot 27.2 42 0.0014 27.8 3.1 38 65-102 318-360 (490)
69 3qj4_A Renalase; FAD/NAD(P)-bi 27.0 52 0.0018 25.4 3.5 32 65-102 309-340 (342)
70 1ryi_A Glycine oxidase; flavop 25.4 26 0.0009 27.4 1.5 39 64-102 318-361 (382)
71 3iwa_A FAD-dependent pyridine 25.3 40 0.0014 27.6 2.7 39 64-102 285-328 (472)
72 2cdu_A NADPH oxidase; flavoenz 24.9 33 0.0011 27.9 2.0 39 64-102 273-316 (452)
73 3klj_A NAD(FAD)-dependent dehy 24.7 56 0.0019 26.2 3.4 38 64-102 256-293 (385)
74 3s5w_A L-ornithine 5-monooxyge 24.6 39 0.0013 27.4 2.4 38 66-103 410-447 (463)
75 2q0l_A TRXR, thioredoxin reduc 23.6 94 0.0032 23.2 4.4 36 65-104 273-308 (311)
76 3cgb_A Pyridine nucleotide-dis 23.0 61 0.0021 26.7 3.4 38 65-102 310-352 (480)
77 2ivd_A PPO, PPOX, protoporphyr 23.0 66 0.0022 26.1 3.5 33 65-103 440-472 (478)
78 3ics_A Coenzyme A-disulfide re 22.6 62 0.0021 27.3 3.4 38 65-102 310-352 (588)
79 1fl2_A Alkyl hydroperoxide red 22.3 1.1E+02 0.0038 22.8 4.5 38 65-106 269-306 (310)
80 2jae_A L-amino acid oxidase; o 22.2 92 0.0031 25.3 4.3 37 65-105 450-486 (489)
81 3lxd_A FAD-dependent pyridine 21.1 54 0.0018 26.3 2.6 38 65-102 277-320 (415)
82 3ab1_A Ferredoxin--NADP reduct 20.8 1.1E+02 0.0037 23.6 4.3 39 65-105 290-328 (360)
83 3ef6_A Toluene 1,2-dioxygenase 20.2 61 0.0021 26.0 2.7 38 64-102 266-308 (410)
No 1
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.92 E-value=1.7e-24 Score=178.98 Aligned_cols=127 Identities=24% Similarity=0.241 Sum_probs=106.2
Q ss_pred CHHHHHH-HHHHHhccCChHHHHHHhhCCCCCcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHH
Q 035639 14 NPELIQK-VLEKYAKVLPPFFLDIVQRSDVSTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALED 92 (177)
Q Consensus 14 ~~~~~~~-~~~~~~~~~~p~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~D 92 (177)
+.+...+ +++.+. +|.|.++.+++.++...+..+.++..++.. +|..|||+|||||||+|+|+.|||+|+||+|
T Consensus 263 ~~~~~~~~~~~~~~-~~~p~~~~li~~~~~~~~~~~~~~~~~~~~----~~~~grv~LiGDAAH~~~P~~GqG~n~ai~D 337 (412)
T 4hb9_A 263 SAEALCDLVQSRMI-SWDPSLHTLVQQSDMENISPLHLRSMPHLL----PWKSSTVTLLGDAIHNMTPMTGSGANTALRD 337 (412)
T ss_dssp CHHHHHHHHHHHTT-TSCHHHHHHHHTSCTTCCEEEEEEECCCCC----CCCCCSEEECTHHHHCSSCCSSSHHHHHHHH
T ss_pred chHHHHHHHHHHhc-cCChHHHHHHHhcccceeccchhccccccc----cccccCEEEEEcccccCCCchhhHHHHHHHH
Confidence 4566677 888888 999999999999886666666666655543 7999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcchH
Q 035639 93 AVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFSGW--LQIGGTLL 154 (177)
Q Consensus 93 A~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~--~~~~~~~~ 154 (177)
|.+|+++|..+..+ .. +++.+|+.||++|++++.+++..|++..+ +++...+.
T Consensus 338 A~~La~~L~~~~~~-------~~--~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~ 392 (412)
T 4hb9_A 338 ALLLTQKLASVASG-------HE--ELVKAISDYEQQMRAYANEIVGISLRSAQNAVIHFSIPP 392 (412)
T ss_dssp HHHHHHHHHHHHTT-------SS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--
T ss_pred HHHHHHHHHHHhcC-------Cc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch
Confidence 99999999998765 24 78899999999999999999999988775 33444443
No 2
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.87 E-value=1.6e-21 Score=162.55 Aligned_cols=129 Identities=28% Similarity=0.407 Sum_probs=108.9
Q ss_pred CCHHHHHH-HHHHHhccCChHHHHHHhhCCCCCcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHH
Q 035639 13 GNPELIQK-VLEKYAKVLPPFFLDIVQRSDVSTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALE 91 (177)
Q Consensus 13 ~~~~~~~~-~~~~~~~~~~p~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~ 91 (177)
.+++...+ +++.+. +|.+.+..+++.+.......+.++...+. ++|..|||+|||||||.|+|+.|||+|+||+
T Consensus 252 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~ 326 (407)
T 3rp8_A 252 EDRDTLRADLSRYFA-GWAPPVQKLIAALDPQTTNRIEIHDIEPF----SRLVRGRVALLGDAGHSTTPDIGQGGCAAME 326 (407)
T ss_dssp CCTTTHHHHHHHHTT-TCCHHHHHHHHHSCGGGCEEEEEEECCCC----SCCEETTEEECGGGTCCCCGGGSCHHHHHHH
T ss_pred CCchhHHHHHHHHhc-CCChHHHHHHHcCCccceeEEeeEecCCC----CceecCCEEEEEcccccCCcchhhhHHHHHH
Confidence 34455566 888998 99999999999886544433555554444 4899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Q 035639 92 DAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFSGWLQIGGTLLGGLLF 159 (177)
Q Consensus 92 DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~ 159 (177)
||..|+++|... . ....+|+.|+++|++++..++..++.+.++++..++....++
T Consensus 327 da~~La~~L~~~-----------~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~R 381 (407)
T 3rp8_A 327 DAVVLGAVFRQT-----------R--DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDMQLTEAW 381 (407)
T ss_dssp HHHHHHHHHHSC-----------C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred HHHHHHHHHhcC-----------C--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCHHHHHHH
Confidence 999999999852 2 577899999999999999999999999999999998876665
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.85 E-value=5.2e-21 Score=159.22 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHhccCChHHHHHHhhCCCCCcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHH
Q 035639 15 PELIQKVLEKYAKVLPPFFLDIVQRSDVSTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAV 94 (177)
Q Consensus 15 ~~~~~~~~~~~~~~~~p~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~ 94 (177)
++...++++.+.+.|++ +.++++.+. ....++++... . ++|..|||+|||||||.|+|+.|||+|+||+||.
T Consensus 256 ~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~-~----~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~ 327 (397)
T 2vou_A 256 PHNLRQFHSKGESLFKP-FRDLVLNAS--SPFVTVVADAT-V----DRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDAR 327 (397)
T ss_dssp HHHHHHHHHHHTTSCHH-HHHHHHHCS--SCEEEEEEEBC-C----SCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhChH-HHHHHhccC--Ccceeeeeeec-C----CceecCcEEEEeccccccCCcchhhHHHHHHHHH
Confidence 44455566776547888 999888764 23355665542 2 3799999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 035639 95 VLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFSGWLQIGG 151 (177)
Q Consensus 95 ~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~~~ 151 (177)
.|++.|.. .. +++.+|+.||++|++++..++..++.+.++++..
T Consensus 328 ~La~~L~~-----------~~--~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~ 371 (397)
T 2vou_A 328 TLAEVFTK-----------NH--DLRGSLQSWETRQLQQGHAYLNKVKKMASRLQHG 371 (397)
T ss_dssp HHHHHHHH-----------CS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHhc-----------CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999985 13 6789999999999999999999999999998854
No 4
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.85 E-value=1.2e-20 Score=157.15 Aligned_cols=127 Identities=17% Similarity=0.159 Sum_probs=99.6
Q ss_pred CCHHHHHH-HHHHHhccCChHHHHHHhhCCCCCcccccccccCCCcccccCccC-C--cEEEeccCCCcCCCCcchhhhh
Q 035639 13 GNPELIQK-VLEKYAKVLPPFFLDIVQRSDVSTLHWAPLMFRHPWNVFFGNLSK-G--NVTVAGDAMHPMTPELGQGGCQ 88 (177)
Q Consensus 13 ~~~~~~~~-~~~~~~~~~~p~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~-g--rv~LiGDAAH~~~P~~GqG~n~ 88 (177)
.+++..++ +.+.|. +|.+.+.++++.. ..+..++++..+.. .+|.. + ||+|||||||.|+|+.|||+|+
T Consensus 264 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ 336 (398)
T 2xdo_A 264 QNRNSVVDFLLKEFS-DWDERYKELIHTT--LSFVGLATRIFPLE----KPWKSKRPLPITMIGDAAHLMPPFAGQGVNS 336 (398)
T ss_dssp TCHHHHHHHHHHHTT-TSCHHHHHHHHHC--SCCEEEEEEECCCC----SCCCSCCSSCEEECTHHHHCCCCTTSCSHHH
T ss_pred CCHHHHHHHHHHHHc-CCChHHHHHHhCc--ccceeeeeEeccCC----CCcccCCCccEEEEeehhccCCCccCccHHH
Confidence 35666677 888898 9999999999873 34555666655433 26765 5 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcchHHHHH
Q 035639 89 ALEDAVVLGRHIGNLLIKTKGHIATTGDNN-VAQAIDGYVKERKWRVTGLVIGSYFSGW-LQIGGTLLGGLL 158 (177)
Q Consensus 89 Al~DA~~La~~L~~~~~~~~~~~~~~~~~~-~~~~l~~Ye~~R~~r~~~~~~~s~~~~~-~~~~~~~~~~~~ 158 (177)
||+||.+|+++|... .. + ++.+|+.|+++|++++..++..+..... ++...++..+++
T Consensus 337 ai~Da~~La~~L~~~----------~~--~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 396 (398)
T 2xdo_A 337 GLVDALILSDNLADG----------KF--NSIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKPDFTFQQLL 396 (398)
T ss_dssp HHHHHHHHHHHHHSC----------CS--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC----
T ss_pred HHHHHHHHHHHHHhc----------cC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccc
Confidence 999999999999873 12 4 7889999999999999999999988775 566666665553
No 5
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.82 E-value=5.5e-20 Score=152.72 Aligned_cols=123 Identities=19% Similarity=0.112 Sum_probs=98.3
Q ss_pred HHHHHhccCChHHH-HHHhhCCCCCcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHH
Q 035639 21 VLEKYAKVLPPFFL-DIVQRSDVSTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRH 99 (177)
Q Consensus 21 ~~~~~~~~~~p~~~-~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~ 99 (177)
+.+.++ .|.+.+. ..++.+.++.+..++++... ..++|..|||+|||||||.|+|+.|||+|+||+||..|+++
T Consensus 245 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~ 319 (399)
T 2x3n_A 245 LRRRLQ-RFVGDESAEAIAAVTGTSRFKGIPIGYL----NLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADA 319 (399)
T ss_dssp HHHHHH-TTCCGGGHHHHHTCCCSTTCEECCCCCE----ECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHh-hcCCcchhhHHhcCCccceEEechhhcc----cccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHH
Confidence 777887 8988873 44455543344555555422 23479999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH
Q 035639 100 IGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFSGWLQIGGTLLGGL 157 (177)
Q Consensus 100 L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~ 157 (177)
|...... .. +++.+|+.|+++|++++..++..++.+.++++..+++...
T Consensus 320 L~~~~~~-------~~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~ 368 (399)
T 2x3n_A 320 LDLALRD-------AC--ALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGV 368 (399)
T ss_dssp HHHHHTT-------SS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhhhcc-------cc--hHHHHHHHHHHHhccHHHHHHHHHHHhhhhhcccCchHHH
Confidence 9987642 13 5788999999999999999999999999999887765543
No 6
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.80 E-value=6.7e-20 Score=151.85 Aligned_cols=115 Identities=14% Similarity=0.028 Sum_probs=88.6
Q ss_pred CHHHHHH-HHHHHhccCChHHHHHHhhCCCCCcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHH
Q 035639 14 NPELIQK-VLEKYAKVLPPFFLDIVQRSDVSTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALED 92 (177)
Q Consensus 14 ~~~~~~~-~~~~~~~~~~p~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~D 92 (177)
+.+..++ +.+.|. +|.+.+ ++++.. . ..++++...+. ++|+.|||+|||||||.|+|+.|||+|+||+|
T Consensus 219 ~~~~~~~~l~~~~~-~~~~~~-~l~~~~---~-~~~~~~~~~~~----~~~~~grv~LvGDAAh~~~P~~GqG~~~al~D 288 (381)
T 3c4a_A 219 SEEASAEYVAKVFQ-AELGGH-GLVSQP---G-LGWRNFMTLSH----DRCHDGKLVLLGDALQSGHFSIGHGTTMAVVV 288 (381)
T ss_dssp CHHHHHHHHHHHTH-HHHTTC-CCBCCT---T-TCSEEEEECCC----SCSEETTEEECGGGTCCCCGGGCCHHHHHHHH
T ss_pred ChHHHHHHHHHHhc-ccCCCc-hhhcCC---C-cceeeeccccC----CCcccCCEEEEEccccccCCCccccHHHHHHH
Confidence 3445555 777777 665442 233211 1 23445444433 48999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 035639 93 AVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFSGWLQIGG 151 (177)
Q Consensus 93 A~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~~~ 151 (177)
|.+|+++|... . +++.+|+.|+++|++++..++..++.+.+++...
T Consensus 289 a~~La~~L~~~-----------~--~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 334 (381)
T 3c4a_A 289 AQLLVKALCTE-----------D--GVPAALKRFEERALPLVQLFRGHADNSRVWFETV 334 (381)
T ss_dssp HHHHHHHHHHS-----------S--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcc-----------c--cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhch
Confidence 99999999873 2 5789999999999999999999999999777653
No 7
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.78 E-value=5.2e-19 Score=147.70 Aligned_cols=105 Identities=25% Similarity=0.368 Sum_probs=86.6
Q ss_pred HHHHHHHhccCCh---HHHHHHhhCCCCCcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHH
Q 035639 19 QKVLEKYAKVLPP---FFLDIVQRSDVSTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVV 95 (177)
Q Consensus 19 ~~~~~~~~~~~~p---~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~ 95 (177)
.++++.+. +|.+ .+..+++.+. .+..+++....+. ++|..|||+|||||||.|+|+.|||+|+||+||.+
T Consensus 260 ~~l~~~~~-~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~----~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~ 332 (410)
T 3c96_A 260 EDVLPFFA-DWDLGWFDIRDLLTRNQ--LILQYPMVDRDPL----PHWGRGRITLLGDAAHLMYPMGANGASQAILDGIE 332 (410)
T ss_dssp HHHHHHHT-TCCBTTBCHHHHHHTCS--EEEEEEEEECCCC----SCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCchhHHHHHHhcCc--ccceeecccCCCc----cccccCCEEEEecccCCCCCccchhHHHHHHHHHH
Confidence 44778887 8864 4677777653 4555666655444 37999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035639 96 LGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYF 143 (177)
Q Consensus 96 La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~ 143 (177)
|+++|... . ..+.+|+.|+++|++++..++..+++
T Consensus 333 La~~L~~~-----------~--~~~~~L~~Ye~~r~~~~~~~~~~s~~ 367 (410)
T 3c96_A 333 LAAALARN-----------A--DVAAALREYEEARRPTANKIILANRE 367 (410)
T ss_dssp HHHHHHHC-----------S--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc-----------C--CHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999862 2 57889999999999999999998884
No 8
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.75 E-value=2.1e-18 Score=152.83 Aligned_cols=82 Identities=27% Similarity=0.298 Sum_probs=74.5
Q ss_pred ccCcc-CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 035639 60 FGNLS-KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLV 138 (177)
Q Consensus 60 ~~~~~-~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~ 138 (177)
.++|. .|||+|+|||||.|+|++|||+|+||+||.+|+++|+.++.+ . ..+.+|+.|+++|++++..++
T Consensus 344 a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g--------~--a~~~lL~tYe~eR~p~a~~~i 413 (665)
T 1pn0_A 344 TEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG--------R--AKRDILKTYEEERQPFAQALI 413 (665)
T ss_dssp CSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT--------C--BCGGGGHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC--------C--CcHHHHHHHHHHHHHHHHHHH
Confidence 45788 799999999999999999999999999999999999998764 2 455789999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 035639 139 IGSYFSGWLQIGG 151 (177)
Q Consensus 139 ~~s~~~~~~~~~~ 151 (177)
..++...++|...
T Consensus 414 ~~s~~~~~l~~~~ 426 (665)
T 1pn0_A 414 DFDHQFSRLFSGR 426 (665)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999998764
No 9
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.74 E-value=4e-18 Score=146.45 Aligned_cols=81 Identities=27% Similarity=0.375 Sum_probs=73.6
Q ss_pred ccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 035639 60 FGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 139 (177)
Q Consensus 60 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~ 139 (177)
.++|..|||+|+|||||.|+|++|||+|+||+||.+|+++|+.++.+ . ..+.+|+.|+++|++++..++.
T Consensus 272 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g--------~--~~~~~L~~Ye~eR~~~~~~~~~ 341 (499)
T 2qa2_A 272 VSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSG--------R--APAGLLDTYHEERHPVGRRLLM 341 (499)
T ss_dssp CSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTT--------S--SCTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcC--------C--CChHHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999998754 2 3567899999999999999999
Q ss_pred HHHHHHHHHhh
Q 035639 140 GSYFSGWLQIG 150 (177)
Q Consensus 140 ~s~~~~~~~~~ 150 (177)
.++....++..
T Consensus 342 ~s~~~~~l~~~ 352 (499)
T 2qa2_A 342 NTQAQGMLFLS 352 (499)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99998888874
No 10
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.74 E-value=5.7e-18 Score=145.54 Aligned_cols=81 Identities=28% Similarity=0.428 Sum_probs=73.9
Q ss_pred ccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 035639 60 FGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 139 (177)
Q Consensus 60 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~ 139 (177)
.++|..|||+|+|||||.|+|++|||+|+||+||.+|+++|+.++.+ . ..+.+|+.|+++|++++..++.
T Consensus 271 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g--------~--~~~~~L~~Y~~eR~~~~~~~~~ 340 (500)
T 2qa1_A 271 VTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNG--------T--ATEELLDSYHSERHAVGKRLLM 340 (500)
T ss_dssp CSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTT--------S--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcC--------C--CChHHHHHHHHHHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999998754 2 4568999999999999999999
Q ss_pred HHHHHHHHHhh
Q 035639 140 GSYFSGWLQIG 150 (177)
Q Consensus 140 ~s~~~~~~~~~ 150 (177)
.++....++..
T Consensus 341 ~s~~~~~l~~~ 351 (500)
T 2qa1_A 341 NTQAQGLLFLS 351 (500)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhcC
Confidence 99998888874
No 11
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.73 E-value=4e-18 Score=148.71 Aligned_cols=84 Identities=26% Similarity=0.241 Sum_probs=76.6
Q ss_pred ccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 035639 60 FGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 139 (177)
Q Consensus 60 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~ 139 (177)
.++|..|||+|+|||||.++|++|||+|+||+||.+|+++|..+..+ . ..+.+|+.|+++|++++..++.
T Consensus 316 a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g--------~--~~~~lL~~Ye~eR~~~~~~~~~ 385 (570)
T 3fmw_A 316 AKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRG--------W--GSEELLDTYHDERHPVAERVLL 385 (570)
T ss_dssp CSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHS--------C--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcC--------C--CcHHHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999998753 2 4578999999999999999999
Q ss_pred HHHHHHHHHhhcch
Q 035639 140 GSYFSGWLQIGGTL 153 (177)
Q Consensus 140 ~s~~~~~~~~~~~~ 153 (177)
.++.+.++|+...+
T Consensus 386 ~s~~~~~l~~~~~~ 399 (570)
T 3fmw_A 386 NTRAQLALMRPDEQ 399 (570)
T ss_dssp HHHHHHHHSCSCTT
T ss_pred HHHHHHHHhcCCch
Confidence 99999999987655
No 12
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.72 E-value=6e-19 Score=145.81 Aligned_cols=107 Identities=19% Similarity=0.147 Sum_probs=82.6
Q ss_pred HHHHHhccCChHHH---HHHhhCCCCCcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHH
Q 035639 21 VLEKYAKVLPPFFL---DIVQRSDVSTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLG 97 (177)
Q Consensus 21 ~~~~~~~~~~p~~~---~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La 97 (177)
+.+.|. +|.+.+. ++++.+....+..++++...+ .++|..|||+|||||||.|+|+.|||+|+||+||..|+
T Consensus 238 l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La 312 (379)
T 3alj_A 238 VPIDLE-VWVEMFPFLEPCLIEAAKLKTARYDKYETTK----LDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLS 312 (379)
T ss_dssp SSCCHH-HHHHHCGGGHHHHHHHHTCTTCCEEEEEEEE----ESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHh-cCCchhccHHHHHhhCCccceEEecccccCC----CCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHH
Confidence 555555 5555544 666654333455566655322 24789999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035639 98 RHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFSG 145 (177)
Q Consensus 98 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~ 145 (177)
++|... . +++.+|+.|+++|++++..++..+....
T Consensus 313 ~~L~~~-----------~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~ 347 (379)
T 3alj_A 313 QDLEEG-----------S--SVEDALVAWETRIRPITDRCQALSGDYA 347 (379)
T ss_dssp HHTTSS-----------S--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccc-----------c--CHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999752 2 5678999999999999999999985433
No 13
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.71 E-value=5.6e-18 Score=140.24 Aligned_cols=79 Identities=19% Similarity=0.153 Sum_probs=70.9
Q ss_pred ccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 035639 60 FGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 139 (177)
Q Consensus 60 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~ 139 (177)
.++|..|||+|||||||.|+|+.|||+|+||+||.+|+++|.....+ ..+.+|+.|+++|++++..++.
T Consensus 273 ~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~-----------~~~~~L~~Y~~~r~~~~~~~~~ 341 (394)
T 1k0i_A 273 VEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYRE-----------GRGELLERYSAICLRRIWKAER 341 (394)
T ss_dssp EECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHH-----------CCGGGGGGHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhcc-----------CchHHHHHHHHHHHHHHHHHHH
Confidence 34788999999999999999999999999999999999999987543 2346899999999999999999
Q ss_pred HHHHHHHHHh
Q 035639 140 GSYFSGWLQI 149 (177)
Q Consensus 140 ~s~~~~~~~~ 149 (177)
.++.+..+++
T Consensus 342 ~s~~~~~~~~ 351 (394)
T 1k0i_A 342 FSWWMTSVLH 351 (394)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 9999888877
No 14
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.71 E-value=8.2e-18 Score=148.39 Aligned_cols=77 Identities=25% Similarity=0.267 Sum_probs=66.9
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFS 144 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~ 144 (177)
.|||+|+|||||.|+|++|||+|+||+||.+|+++|+.++.+ . ..+.+|+.|+++|+++++.++..++..
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g--------~--a~~~lL~~Ye~eR~~~a~~~~~~s~~~ 410 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRK--------Q--CAPELLHTYSSERQVVAQQLIDFDREW 410 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTT--------S--BCGGGGHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcC--------C--CcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999998764 2 345789999999999999999999998
Q ss_pred HHHHhhc
Q 035639 145 GWLQIGG 151 (177)
Q Consensus 145 ~~~~~~~ 151 (177)
.++++..
T Consensus 411 ~~~~~~~ 417 (639)
T 2dkh_A 411 AKMFSDP 417 (639)
T ss_dssp CC-----
T ss_pred HHHhcCC
Confidence 8888754
No 15
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.70 E-value=7.5e-18 Score=146.20 Aligned_cols=81 Identities=21% Similarity=0.217 Sum_probs=65.0
Q ss_pred ccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 035639 60 FGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 139 (177)
Q Consensus 60 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~ 139 (177)
.++|..|||+|+|||||.|+|++|||+|+||+||.+|+++|+.++.+ . ..+.+|+.|+++|++++..++.
T Consensus 303 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g--------~--a~~~lL~~Y~~eR~~~a~~~~~ 372 (549)
T 2r0c_A 303 ADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRG--------W--AGPGLLATYEEERRPVAITSLE 372 (549)
T ss_dssp CSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHT--------C--SCTTTTHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcC--------C--CCHHHHHHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999998764 2 3457899999999999999999
Q ss_pred HHHHHHHHHhh
Q 035639 140 GSYFSGWLQIG 150 (177)
Q Consensus 140 ~s~~~~~~~~~ 150 (177)
.++....+++.
T Consensus 373 ~s~~~~~~~~~ 383 (549)
T 2r0c_A 373 EANVNLRRTMD 383 (549)
T ss_dssp C----------
T ss_pred HHHHHHHhhcc
Confidence 99999888765
No 16
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.70 E-value=1.8e-17 Score=142.97 Aligned_cols=81 Identities=25% Similarity=0.244 Sum_probs=72.7
Q ss_pred ccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 035639 60 FGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 139 (177)
Q Consensus 60 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~ 139 (177)
.++|..|||+|+|||||.|+|++|||+|+||+||.+|+++|..+..+ . ..+.+|+.|+++|++++..++.
T Consensus 295 a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g--------~--~~~~lL~~Ye~eR~p~a~~~~~ 364 (535)
T 3ihg_A 295 AERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQG--------Q--AGAGLLDTYEDERKVAAELVVA 364 (535)
T ss_dssp ESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTT--------S--SCTTHHHHHHHHHHHHHHHHHH
T ss_pred ECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcC--------C--CcHHHHHhhHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999998754 2 4457899999999999999999
Q ss_pred HHHHHHHHHhh
Q 035639 140 GSYFSGWLQIG 150 (177)
Q Consensus 140 ~s~~~~~~~~~ 150 (177)
.|....+.+..
T Consensus 365 ~s~~~~~~~~~ 375 (535)
T 3ihg_A 365 EALAIYAQRMA 375 (535)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHhhHhhcc
Confidence 99998876653
No 17
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.68 E-value=1.9e-16 Score=133.34 Aligned_cols=114 Identities=21% Similarity=0.252 Sum_probs=88.0
Q ss_pred CCHHHHHH-HHHHHhccCChHHHHHHhhCC------CCCc---ccccccccCCCcccccCccCCcEEE-eccCCCcCCCC
Q 035639 13 GNPELIQK-VLEKYAKVLPPFFLDIVQRSD------VSTL---HWAPLMFRHPWNVFFGNLSKGNVTV-AGDAMHPMTPE 81 (177)
Q Consensus 13 ~~~~~~~~-~~~~~~~~~~p~~~~~i~~~~------~~~~---~~~~l~~~~~~~~~~~~~~~grv~L-iGDAAH~~~P~ 81 (177)
.++++..+ +++.|+ +|.|.+..+++... +..+ ..+++.. .+ ..+|..||++| +|||||.|+|+
T Consensus 250 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~----~~~~~~~~~~ll~GDAah~~~p~ 323 (430)
T 3ihm_A 250 DDPRAFLDLMLEKLG-KHHPSVAERIDPAEFDLANSSLDILQGGVVPAFR-DG----HATLNNGKTIIGLGDIQATVDPV 323 (430)
T ss_dssp TCHHHHHHHHHHHHH-HHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEB-CS----EEECTTSCEEEECGGGTEECCGG
T ss_pred CCHHHHHHHHHHHHH-HhCccHHHHHhhchhccccCccceeecceeeccc-cc----ccccCCCCEEEEecCccccCCCc
Confidence 36776777 899998 99999998887765 2222 1222221 22 34789999999 99999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 035639 82 LGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERK-WRVTGLVIGSYFSG 145 (177)
Q Consensus 82 ~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~-~r~~~~~~~s~~~~ 145 (177)
.|||+|+||+||.+|+++|... . +.+.+|..|+.+|+ +++....+.++.+.
T Consensus 324 ~g~G~~~a~~da~~l~~~l~~~-----------~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 375 (430)
T 3ihm_A 324 LGQGANMASYAAWILGEEILAH-----------S--VYDLRFSEHLERRRQDRVLCATRWTNFTL 375 (430)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHC-----------S--CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHhc-----------C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999973 2 46689999999998 77777776666554
No 18
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.56 E-value=1.3e-14 Score=124.72 Aligned_cols=118 Identities=14% Similarity=0.132 Sum_probs=85.9
Q ss_pred HHHHHhccCChHHHHHHhhCCCC-CcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHH
Q 035639 21 VLEKYAKVLPPFFLDIVQRSDVS-TLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRH 99 (177)
Q Consensus 21 ~~~~~~~~~~p~~~~~i~~~~~~-~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~ 99 (177)
.++.+. .+.|.+.+++.....- ......+...........+|..+||+|||||||.++|+.|||+|+||+||..|++.
T Consensus 251 ~~~~~l-~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~ 329 (512)
T 3e1t_A 251 ALLRYI-DRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARA 329 (512)
T ss_dssp HHHHHH-HTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHH
Confidence 444555 6788888888764311 11111111111111123478889999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035639 100 IGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFSGWLQ 148 (177)
Q Consensus 100 L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~ 148 (177)
|...+.+ .. +...+|+.|++.|+++...+.........+.
T Consensus 330 L~~~l~~-------~~--~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~ 369 (512)
T 3e1t_A 330 INTCLAG-------EM--SEQRCFEEFERRYRREYGNFYQFLVAFYDMN 369 (512)
T ss_dssp HHHHTTT-------CS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcC-------Cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9987654 23 6778999999999999999988777655554
No 19
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.54 E-value=4.6e-15 Score=125.46 Aligned_cols=81 Identities=11% Similarity=-0.026 Sum_probs=70.7
Q ss_pred cCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 035639 61 GNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 140 (177)
Q Consensus 61 ~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~ 140 (177)
++|+.|||+|+|||||.++|+.|||+|+||+||..||++|...+.. .+ ....+|+.|+++|++++...+..
T Consensus 277 ~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~-------~~--~~~~~L~~Y~~~r~~~~~~~~~~ 347 (453)
T 3atr_A 277 YTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFET-------GD--FSASGLWDMNICYVNEYGAKQAS 347 (453)
T ss_dssp SCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH-------TC--CSTTTTTHHHHHHHHHTHHHHHH
T ss_pred CceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHc-------CC--ccHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999987653 11 22568999999999999999999
Q ss_pred HHHHHHHHhh
Q 035639 141 SYFSGWLQIG 150 (177)
Q Consensus 141 s~~~~~~~~~ 150 (177)
++...+++..
T Consensus 348 ~~~~~~~~~~ 357 (453)
T 3atr_A 348 LDIFRRFLQK 357 (453)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 9888887663
No 20
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.54 E-value=4e-14 Score=115.80 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=65.7
Q ss_pred CccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 035639 62 NLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGS 141 (177)
Q Consensus 62 ~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s 141 (177)
+|+.+||+|+|||||.++|+.|||+|+||+||..||+.|.+++.+ .+ ..+.+|+.||+.++++..+.+...
T Consensus 273 ~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~-------~~--~~~~~L~~Ye~~~~~~~~~~~~~~ 343 (397)
T 3oz2_A 273 PITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES-------ND--YSPQMMQKYEKLIKERFERKHLRN 343 (397)
T ss_dssp CCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH-------TC--CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHc-------CC--ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999998775 22 457899999999888876666555
Q ss_pred HHHHHHHh
Q 035639 142 YFSGWLQI 149 (177)
Q Consensus 142 ~~~~~~~~ 149 (177)
....+.+.
T Consensus 344 ~~~~~~~~ 351 (397)
T 3oz2_A 344 WVAKEKLA 351 (397)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554444
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.49 E-value=3.8e-13 Score=110.62 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=71.7
Q ss_pred cCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 035639 61 GNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 140 (177)
Q Consensus 61 ~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~ 140 (177)
.+|..+||+|+|||||.++|+.|||+|+|++||..|++.|...... .. ....+|+.|++.|+++..+.+..
T Consensus 272 ~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~-------~~--~~~~~l~~Y~~~~~~~~~~~~~~ 342 (397)
T 3cgv_A 272 MPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES-------ND--YSPQMMQKYEKLIKERFERKHLR 342 (397)
T ss_dssp SCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH-------TC--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc-------CC--ccHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999987653 12 45678999999999999999999
Q ss_pred HHHHHHHHhh
Q 035639 141 SYFSGWLQIG 150 (177)
Q Consensus 141 s~~~~~~~~~ 150 (177)
++...+++..
T Consensus 343 ~~~~~~~~~~ 352 (397)
T 3cgv_A 343 NWVAKEKLAM 352 (397)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9998887754
No 22
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.44 E-value=4.1e-14 Score=123.64 Aligned_cols=91 Identities=15% Similarity=0.060 Sum_probs=73.8
Q ss_pred cCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHH---HHHHHHHHHHH-HHH
Q 035639 61 GNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQA---IDGYVKERKWR-VTG 136 (177)
Q Consensus 61 ~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~---l~~Ye~~R~~r-~~~ 136 (177)
++|..+||+|||||||.++|+.|||+|+||+||..||+.|..++.. .+...+.+ |+.|+++|+++ +.+
T Consensus 342 ~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~--------g~~~~~~a~~~L~~Ye~~r~~~~v~~ 413 (584)
T 2gmh_A 342 PKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTS--------ENLQSKTIGLHVTEYEDNLKNSWVWK 413 (584)
T ss_dssp CCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTC--------CCCCCSSSSCCCTHHHHHHHTSHHHH
T ss_pred CccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHc--------CCcchhhhhhhHHHHHHHHHHhHHHH
Confidence 4789999999999999999999999999999999999999987642 10001343 89999999998 788
Q ss_pred HHHHHHHHHHHHhhc-chHHHHHH
Q 035639 137 LVIGSYFSGWLQIGG-TLLGGLLF 159 (177)
Q Consensus 137 ~~~~s~~~~~~~~~~-~~~~~~~~ 159 (177)
.+..++.+..+++.. +.+..++.
T Consensus 414 ~l~~~r~~~~~~~~~~g~~~~~~~ 437 (584)
T 2gmh_A 414 ELYSVRNIRPSCHGILGVYGGMIY 437 (584)
T ss_dssp HHHHTTTTTGGGGSTTTHHHHHHH
T ss_pred HHHHHhChhHHHHHhhccHHHHHH
Confidence 888888888877654 66666644
No 23
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.38 E-value=1.9e-12 Score=113.30 Aligned_cols=110 Identities=13% Similarity=-0.033 Sum_probs=84.0
Q ss_pred HHHHHhccCChHHHHHHhhCCC-CCcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHH
Q 035639 21 VLEKYAKVLPPFFLDIVQRSDV-STLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRH 99 (177)
Q Consensus 21 ~~~~~~~~~~p~~~~~i~~~~~-~~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~ 99 (177)
+.+.+. .+.|.+...+..... ......+.+ .....+|..+||+|||||||.++|+.|||+|+|++||..|++.
T Consensus 268 ~~~~l~-~~~p~l~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~ 341 (591)
T 3i3l_A 268 FYSSTL-AKCAKAMDILGGAEQVDEVRIVQDW-----SYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAA 341 (591)
T ss_dssp HHHHHH-TTCHHHHHHHTTCEECSCCEEEEEE-----EEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhCHHHHHHHhcCccccCceEeccc-----ccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHH
Confidence 666666 777888888775431 111111111 1123478899999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035639 100 IGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYFSG 145 (177)
Q Consensus 100 L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~ 145 (177)
|...+.+ .. ..+.+++.|++.|+++...+........
T Consensus 342 L~~~l~~-------~~--~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 342 IDRITRH-------GD--EKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp HHHHHHC-------GG--GHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC-------Cc--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988654 12 5678899999999999999988887666
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.32 E-value=1.4e-12 Score=112.37 Aligned_cols=69 Identities=9% Similarity=-0.114 Sum_probs=59.1
Q ss_pred cCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 035639 61 GNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 140 (177)
Q Consensus 61 ~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~ 140 (177)
++|..|||+|||||||.++|+.|||+|+||+||..|++.|.... . ..+.+++.|+++|+++..++...
T Consensus 340 ~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~~----------~--~~~~~l~~Y~~~~~~~~~~~~~~ 407 (526)
T 2pyx_A 340 AKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPNR----------M--VMDTISARVNERYQQHWQQIIDF 407 (526)
T ss_dssp SCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSCH----------H--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhcC----------C--cCHHHHHHHHHHHHHHHHHHHHH
Confidence 36778999999999999999999999999999999999886311 1 45689999999999998887664
Q ss_pred H
Q 035639 141 S 141 (177)
Q Consensus 141 s 141 (177)
.
T Consensus 408 ~ 408 (526)
T 2pyx_A 408 L 408 (526)
T ss_dssp H
T ss_pred H
Confidence 4
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.29 E-value=1.6e-12 Score=112.26 Aligned_cols=68 Identities=13% Similarity=-0.047 Sum_probs=58.0
Q ss_pred cCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 035639 61 GNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 140 (177)
Q Consensus 61 ~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~ 140 (177)
.+|..|||+|||||||.++|+.|||+|+|++||..|++.|.. .. ..+.+|+.|+++|+++..++...
T Consensus 325 ~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~-----------~~--~~~~~l~~Y~~~~~~~~~~~~~~ 391 (538)
T 2aqj_A 325 KRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD-----------TS--FDPRLSDAFNAEIVHMFDDCRDF 391 (538)
T ss_dssp SCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB-----------TT--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc-----------cC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 367789999999999999999999999999999999988863 12 45678999999999988777653
Q ss_pred H
Q 035639 141 S 141 (177)
Q Consensus 141 s 141 (177)
.
T Consensus 392 ~ 392 (538)
T 2aqj_A 392 V 392 (538)
T ss_dssp H
T ss_pred H
Confidence 3
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.27 E-value=2.8e-12 Score=109.73 Aligned_cols=73 Identities=14% Similarity=-0.035 Sum_probs=61.2
Q ss_pred cCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 035639 61 GNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 140 (177)
Q Consensus 61 ~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~ 140 (177)
++|..|||+|||||||.++|+.|||+|+|++||..|+++|.. .. ..+.+|+.|++.|+++...+...
T Consensus 333 ~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~-----------~~--~~~~~l~~Y~~~~~~~~~~~~~~ 399 (511)
T 2weu_A 333 ERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG-----------ER--WDPVLISAYNERMAHMVDGVKEF 399 (511)
T ss_dssp SCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC-----------TT--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc-----------CC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999874 12 45678999999999999887776
Q ss_pred HHHHHH
Q 035639 141 SYFSGW 146 (177)
Q Consensus 141 s~~~~~ 146 (177)
......
T Consensus 400 ~~~~y~ 405 (511)
T 2weu_A 400 LVLHYK 405 (511)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 544433
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.24 E-value=4.1e-12 Score=110.09 Aligned_cols=72 Identities=11% Similarity=-0.051 Sum_probs=61.2
Q ss_pred CccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 035639 62 NLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGS 141 (177)
Q Consensus 62 ~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s 141 (177)
+|..+||+|||||||.++|+.|||+|+|++||..|+++|.. .. ..+.+|+.|+++|+++...+....
T Consensus 357 ~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~-----------~~--~~~~~l~~Y~~~~~~~~~~i~~~~ 423 (550)
T 2e4g_A 357 RAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD-----------KS--LNPVLTARFNREIETMFDDTRDFI 423 (550)
T ss_dssp CSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC-----------TT--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc-----------cC--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999988863 12 456799999999999999887766
Q ss_pred HHHHH
Q 035639 142 YFSGW 146 (177)
Q Consensus 142 ~~~~~ 146 (177)
.....
T Consensus 424 ~~~y~ 428 (550)
T 2e4g_A 424 QAHFY 428 (550)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 28
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.21 E-value=3.4e-11 Score=100.01 Aligned_cols=102 Identities=10% Similarity=0.076 Sum_probs=70.1
Q ss_pred HHHHHHHhccCChHHHHHHhhCCCC-CcccccccccCCCcccccCccCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHH
Q 035639 19 QKVLEKYAKVLPPFFLDIVQRSDVS-TLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLG 97 (177)
Q Consensus 19 ~~~~~~~~~~~~p~~~~~i~~~~~~-~~~~~~l~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La 97 (177)
.++++.+. .+.|.+...++..... .+..++.+ .....+|..+|++|||||||.++|+.|||+|+|++||..|+
T Consensus 246 ~~~l~~~~-~~~p~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la 319 (421)
T 3nix_A 246 EERMRAMI-ANEGHIAERFKSEEFLFEPRTIEGY-----AISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGG 319 (421)
T ss_dssp HHHHHHHH-HTCTTTHHHHTTCCBSSCCEEEECC-----CBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HhCcHHHHHHhcCccccCceeeccc-----ceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHH
Confidence 33445555 5667777777765422 22222222 11234678899999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 035639 98 RHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGL 137 (177)
Q Consensus 98 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~ 137 (177)
+.|.....+ + ....++.|++.++......
T Consensus 320 ~~l~~~~~~--------~---~~~~~~~y~~~~~~~~~~~ 348 (421)
T 3nix_A 320 KLAVQFLKG--------E---EVNWEKDFVEHMMQGIDTF 348 (421)
T ss_dssp HHHHHHHTT--------C---CCCHHHHTHHHHHHHHHHH
T ss_pred HHHHHHhcC--------C---chhHHHHHHHHHHHHHHHH
Confidence 999987653 1 1125667777776654433
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.82 E-value=2.6e-09 Score=91.50 Aligned_cols=64 Identities=17% Similarity=0.172 Sum_probs=50.6
Q ss_pred cccCccCCc-EEEeccCCC-cCCCCcchhhhhHHHHHHHHHHHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 035639 59 FFGNLSKGN-VTVAGDAMH-PMTPELGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTG 136 (177)
Q Consensus 59 ~~~~~~~gr-v~LiGDAAH-~~~P~~GqG~n~Al~DA~~La~~L~~~~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~ 136 (177)
..++|..|| |+|+||||| .+.| .|||+|++|+||..|+++|+....+ . .....| .+|++.+..
T Consensus 386 ~a~~~~~gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~l~~~l~~~~~g--------~--~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 386 VQEKHGARLLLGLVGDCLVEPFWP-LGTGVARGFLAAFDAAWMVKRWAEG--------A--GPLEVL----AERESLYQL 450 (497)
T ss_dssp EEEETTEEEEEEECGGGTBCCCGG-GCCHHHHHHHHHHHHHHHHHHHHTT--------C--CHHHHH----HHHHHHHTT
T ss_pred HHHhcCCcccceEeccccccCcCc-cccchhhHHHHHHHHHHHHHHHhCC--------C--Cccchh----hhHHHHhhh
Confidence 456788998 999999999 4555 9999999999999999999998654 2 344555 777776654
Q ss_pred H
Q 035639 137 L 137 (177)
Q Consensus 137 ~ 137 (177)
+
T Consensus 451 l 451 (497)
T 2bry_A 451 L 451 (497)
T ss_dssp G
T ss_pred h
Confidence 3
No 30
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.33 E-value=0.00014 Score=54.34 Aligned_cols=37 Identities=16% Similarity=-0.023 Sum_probs=32.9
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
..+||+|+|||++ |.|++.||.++..+|+.|.+.+++
T Consensus 293 ~~~~v~l~GDa~~------g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecccC------CcCHHHHHHHHHHHHHHHHHHhhc
Confidence 4689999999964 679999999999999999998764
No 31
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.12 E-value=0.0045 Score=49.01 Aligned_cols=35 Identities=17% Similarity=-0.014 Sum_probs=30.9
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
.+||+|+|||+|. .|++.|+.++..||+.|.+.+.
T Consensus 294 ~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 294 DLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhh
Confidence 4899999999974 3999999999999999988754
No 32
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=57.69 E-value=20 Score=30.08 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=30.3
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNL 103 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~ 103 (177)
...+|.-+||+|....|-.|| .|.+-|..+|+.|...
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHHH
Confidence 357899999999887777776 6889999999988654
No 33
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=49.12 E-value=17 Score=29.35 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=26.3
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNL 103 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~ 103 (177)
.+++.++||+. .|.|++.|+..+..+|+.|...
T Consensus 435 ~~~l~~aG~~~------~g~gv~~a~~sG~~aA~~i~~~ 467 (470)
T 3i6d_A 435 YPGVYMTGASF------EGVGIPDCIDQGKAAVSDALTY 467 (470)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecC------CCCCHHHHHHHHHHHHHHHHHH
Confidence 37899999964 3667888999999888887653
No 34
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=48.69 E-value=26 Score=26.47 Aligned_cols=41 Identities=17% Similarity=0.026 Sum_probs=29.8
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
...+|..+||++... .....+..|+.++...|..+...+.+
T Consensus 278 ~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 278 SVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp SSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHHHH
Confidence 347899999998753 11234667888999888888876654
No 35
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=48.39 E-value=24 Score=28.11 Aligned_cols=40 Identities=25% Similarity=0.271 Sum_probs=29.9
Q ss_pred CCcEEEeccCCCcC-CCCcchhhhhHHHHHHHHHHHHHHHHhhh
Q 035639 65 KGNVTVAGDAMHPM-TPELGQGGCQALEDAVVLGRHIGNLLIKT 107 (177)
Q Consensus 65 ~grv~LiGDAAH~~-~P~~GqG~n~Al~DA~~La~~L~~~~~~~ 107 (177)
..+|.-+||+|... .|-.| ..|...|.++|+.|...+.++
T Consensus 286 ~p~VfAiGDva~~~~~pk~a---~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 286 QPGIHVIGDACNAAPMPKSA---YSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp STTEEECGGGBCCTTSCBSH---HHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEecccccCCCCCchH---HHHHHHHHHHHHHHHHHhcCC
Confidence 46899999988643 34444 468889999999998877653
No 36
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=46.54 E-value=26 Score=27.20 Aligned_cols=39 Identities=13% Similarity=0.005 Sum_probs=25.1
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLL 104 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~ 104 (177)
..+|..+||++....+..+ +...+-..|..+|+.|....
T Consensus 300 ~~~v~a~GD~~~~~~~~~~-~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 300 YPNIFMIGATVENDNAKLC-YIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp STTEEECSTTCCCSSCCCC-SHHHHGGGHHHHHHHHHHHT
T ss_pred CCCeEEeccccccCCeeEE-EEehhhHHHHHHHHHHhccc
Confidence 4689999999876554433 22334455677777776643
No 37
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=46.04 E-value=27 Score=28.23 Aligned_cols=44 Identities=16% Similarity=0.071 Sum_probs=31.6
Q ss_pred cCCcEEEeccCCCcCCCC-------cchhhhhHHHHHHHHHHHHHHHHhhh
Q 035639 64 SKGNVTVAGDAMHPMTPE-------LGQGGCQALEDAVVLGRHIGNLLIKT 107 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~-------~GqG~n~Al~DA~~La~~L~~~~~~~ 107 (177)
...+|..+||+++...|. .-.-+..|+..+..+|+.|...+.+.
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 357899999999876421 01224578899999999998877654
No 38
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=44.07 E-value=35 Score=23.57 Aligned_cols=38 Identities=21% Similarity=0.081 Sum_probs=28.8
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
...+|..+||++....| -+..|+.++..+|..|...+.
T Consensus 134 ~~~~i~a~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 134 SYPRVYAAGVARGKVPG----HAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp SSTTEEECGGGGTCCSC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCcchh----hHHHHHHhHHHHHHHHHHHhh
Confidence 44789999999987544 345788888888888876554
No 39
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=43.22 E-value=28 Score=28.31 Aligned_cols=44 Identities=18% Similarity=0.009 Sum_probs=31.6
Q ss_pred cCCcEEEeccCCCcCCCC-------cchhhhhHHHHHHHHHHHHHHHHhhh
Q 035639 64 SKGNVTVAGDAMHPMTPE-------LGQGGCQALEDAVVLGRHIGNLLIKT 107 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~-------~GqG~n~Al~DA~~La~~L~~~~~~~ 107 (177)
...+|..+||+++...+. .-.-+..|+..+..+|+.|...+.+.
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 357899999999876421 11224578899999999998876653
No 40
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=42.61 E-value=36 Score=25.89 Aligned_cols=37 Identities=19% Similarity=0.021 Sum_probs=28.2
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
..+|..+||++.... ..+..|+.++...|..|...+.
T Consensus 280 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 280 VPGVYAAGDVTSGNF----AQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp STTEEECSTTBTTCC----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeecccCcch----hhHHHHHHHHHHHHHHHHHHhh
Confidence 468999999997521 2366789999999988877654
No 41
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=39.23 E-value=27 Score=28.36 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=27.1
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~ 102 (177)
.+++.|+||. +.|.|++-++..+..+|+.|..
T Consensus 441 ~~~l~l~G~~------~~G~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 441 RLPLTLAGAS------YEGVAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TCSEEECSTT------TSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccC------CCCCcHHHHHHHHHHHHHHHHh
Confidence 3689999998 3577999999999999988865
No 42
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=38.84 E-value=38 Score=25.87 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=28.8
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
..+|..+||++.... ..+..|+.++...|..|...+.+
T Consensus 287 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~ 324 (333)
T 1vdc_A 287 VPGVFAAGDVQDKKY----RQAITAAGTGCMAALDAEHYLQE 324 (333)
T ss_dssp STTEEECGGGGCSSC----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeeccCCCc----hhHHHHHHhHHHHHHHHHHHHHh
Confidence 468999999987542 23567888999998888876654
No 43
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=38.78 E-value=34 Score=25.43 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=28.4
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
...+|..+||++.. | ..+..|+.++...|..+...+.
T Consensus 256 ~~~~vya~GD~~~~--~---~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 256 TARGIFACGDVARP--A---GSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp SSTTEEECSGGGCT--T---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeecCCc--h---HHHHHHHHhHHHHHHHHHHHHh
Confidence 34689999999875 2 2356788899999888877654
No 44
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=38.73 E-value=32 Score=27.44 Aligned_cols=37 Identities=32% Similarity=0.439 Sum_probs=28.9
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLL 104 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~ 104 (177)
..+|..+||+++...|-.+ ..|...+..+|..|...+
T Consensus 299 ~~~vfa~GD~~~~~~~~~~---~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 299 YDNVYAVGDANSMTVPKLG---YLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp CTTEEECGGGBTTCCSCCH---HHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeehhccCCCCcHH---HHHHHHHHHHHHHHHHHh
Confidence 4689999999986444433 468889999999998876
No 45
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=38.52 E-value=42 Score=25.37 Aligned_cols=38 Identities=16% Similarity=0.111 Sum_probs=29.1
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
..+|..+||++.... ..+..|+.++...|..+...+.+
T Consensus 278 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 278 IPGVFAAGDVMDHIY----RQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp STTEEECGGGGCSSS----CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEcccccCCcc----hhhhhhhccHHHHHHHHHHHHHh
Confidence 468999999987532 23567899999999988887653
No 46
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=38.02 E-value=24 Score=28.96 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=24.2
Q ss_pred CcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 66 GNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 66 grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
.++.|+||..|+ |.|+..++..+...|+.|.+-+.
T Consensus 458 ~gLyl~G~~t~p-----G~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 458 TNLYLVGAGTHP-----GAGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp TTEEECCCH-----------HHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCC-----cccHHHHHHHHHHHHHHHHHHhc
Confidence 579999998874 67889999999998888766544
No 47
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=37.26 E-value=27 Score=27.97 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=26.4
Q ss_pred CcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHH
Q 035639 66 GNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHI 100 (177)
Q Consensus 66 grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L 100 (177)
+++.|+||..+ |..|-.+.-|+..+...|+.|
T Consensus 372 ~gl~laGd~~~---~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 372 NEVLVVGDGYR---PPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp SSEEECSTTCC---CTTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEECCccc---CCCceeeehHHHHHHHHHHHh
Confidence 78999999987 334556688899999999888
No 48
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=36.92 E-value=59 Score=24.73 Aligned_cols=38 Identities=11% Similarity=-0.041 Sum_probs=28.5
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
..+|..+||++....+ -+..|+.++..+|..|...+.+
T Consensus 276 ~~~vya~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 276 IPMLFAAGDVSDYIYR----QLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp STTEEECSTTTCSSCC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCccHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999875322 3567888999988888776554
No 49
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=36.72 E-value=34 Score=25.95 Aligned_cols=41 Identities=10% Similarity=-0.101 Sum_probs=29.2
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
...+|..+||++.... .-.-+..|+.++..+|..+...+.+
T Consensus 276 ~~~~vya~GD~~~~~~--~~~~~~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 276 NIEGFFAAGDICTYEG--KVNLIASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp SSTTEEECGGGEECTT--CCCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred ecCCEEEccceecCCC--CcceEeeehhhHHHHHHHHHHhhCh
Confidence 3468999999986421 1223467888899999988887654
No 50
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=36.52 E-value=47 Score=26.89 Aligned_cols=40 Identities=18% Similarity=0.115 Sum_probs=29.4
Q ss_pred CCcEEEeccCCCcCC----------CCcchhhhhHHHHHHHHHHHHHHHHhhh
Q 035639 65 KGNVTVAGDAMHPMT----------PELGQGGCQALEDAVVLGRHIGNLLIKT 107 (177)
Q Consensus 65 ~grv~LiGDAAH~~~----------P~~GqG~n~Al~DA~~La~~L~~~~~~~ 107 (177)
..+|.-+||+|...+ |-+| ..|.+-|..+|+.|...+.+.
T Consensus 286 ~~~IfAiGD~a~~p~~~~~~~~~~~pk~a---~~A~~qg~~~A~Ni~~~l~g~ 335 (430)
T 3hyw_A 286 YKNIFGVGVVTAIPPIEKTPIPTGVPKTG---MMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp STTEEECSTTBCCCCSSCCSSCCCCCCCH---HHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEeccEEecCCcccCcCcCccchHH---HHHHHHHHHHHHHHHHHhcCC
Confidence 368999999997543 2233 368888999999888776653
No 51
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=35.41 E-value=22 Score=28.71 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=30.9
Q ss_pred cCCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
...+|..+||++....|..|. -...|..++..+|..|..
T Consensus 264 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 264 TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 346899999999987776553 356799999999998874
No 52
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=35.19 E-value=45 Score=27.22 Aligned_cols=38 Identities=16% Similarity=0.028 Sum_probs=27.6
Q ss_pred CcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 66 GNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 66 grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
+|+.|+||+.|.- .+.++.-|++.+...|+.|...+..
T Consensus 423 ~~l~fAG~~t~~~---~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 423 GRVYFTGEHTSEH---YNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp TTEEECSGGGCTT---TTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecccCCC---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence 7999999998763 2335677777777777777665543
No 53
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=34.97 E-value=46 Score=24.96 Aligned_cols=38 Identities=21% Similarity=0.124 Sum_probs=27.9
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
...+|..+||+++.. | ..+..|+.++...|..|...+.
T Consensus 275 ~~~~v~a~GD~~~~~-~---~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 275 SVAGLFAAGDLRKDA-P---KQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp SSTTEEECGGGBTTC-C---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCc-h---hhhhhHHhhHHHHHHHHHHHHH
Confidence 346899999998642 2 2356788888888888877654
No 54
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=34.48 E-value=63 Score=24.75 Aligned_cols=38 Identities=16% Similarity=0.080 Sum_probs=27.7
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
..+|..+||++..... -+..|+.++...|..+...+.+
T Consensus 280 ~~~iya~GD~~~~~~~----~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 280 LPGVFAAGDLVDRTYR----QAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp STTEEECGGGTCCSCC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeecCCccHH----HHHHHHHhHHHHHHHHHHHhhc
Confidence 4689999999875322 2566788888888888776553
No 55
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=34.47 E-value=40 Score=25.56 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=28.3
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
..+|..+||++....+ .+..|+.++...|..+...+.
T Consensus 299 ~~~vya~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 299 VPGFFAAGDVQDSKYR----QAITSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp STTEEECGGGGCSSCC----CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeeccCCCCcc----ceeeehhhhHHHHHHHHHHHh
Confidence 4689999999984322 346788999999988887664
No 56
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=32.80 E-value=35 Score=27.78 Aligned_cols=39 Identities=26% Similarity=0.187 Sum_probs=30.3
Q ss_pred cCCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
...+|..+||++...++..|. -+..|+.++..++..|..
T Consensus 271 ~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 271 SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcC
Confidence 346899999999877766553 457889999999988864
No 57
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=31.75 E-value=44 Score=24.44 Aligned_cols=34 Identities=12% Similarity=0.057 Sum_probs=25.4
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNL 103 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~ 103 (177)
..++|..+||+| . .. -+..+++.+..+|..|...
T Consensus 197 ~~p~iya~G~~a-~-~g----~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 197 RLEGLYAVGLCV-R-EG----DYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp TSBSEEECGGGT-S-CC----CHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeeeecc-c-Cc----cHHHHHHHHHHHHHHHHhh
Confidence 457899999999 3 22 2335689999999988764
No 58
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=31.74 E-value=51 Score=25.09 Aligned_cols=37 Identities=16% Similarity=-0.039 Sum_probs=26.1
Q ss_pred CCcEEEec--cCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 65 KGNVTVAG--DAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 65 ~grv~LiG--DAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
..+|..+| |++. ..|.. +..|+.++..+|..|...+.
T Consensus 314 ~~~vya~Gd~d~~~-~~~~~---~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 314 VPSVWLLGYGDWNG-MASAT---LIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp CTTEEECSSCGGGS-TTCSS---TTTHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEeccccccc-cchhh---hhhhHHHHHHHHHHHHHHHH
Confidence 46899999 5555 22222 33489999999999988654
No 59
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=31.59 E-value=29 Score=27.61 Aligned_cols=32 Identities=13% Similarity=0.075 Sum_probs=26.2
Q ss_pred CcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHH
Q 035639 66 GNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHI 100 (177)
Q Consensus 66 grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L 100 (177)
+++.|+||..+ |.+|.|++-++..|...++.|
T Consensus 392 ~gL~laG~~~~---~~gg~gv~~~~~s~~~~~~~i 423 (425)
T 3ka7_A 392 SGLYVVGDGAK---GKGGIEVEGVALGVMSVMEKV 423 (425)
T ss_dssp BTEEECSTTSC---CTTCCHHHHHHHHHHHHHHC-
T ss_pred CCeEEeCCccC---CCCCCccHHHHHHHHHHHHHh
Confidence 48999999976 458899999999988877665
No 60
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=31.38 E-value=43 Score=27.20 Aligned_cols=33 Identities=21% Similarity=0.126 Sum_probs=27.0
Q ss_pred CcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 035639 66 GNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLL 104 (177)
Q Consensus 66 grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~ 104 (177)
+++.++||+.+ |.|++-|+..+..+|+.|...+
T Consensus 433 ~~l~~aG~~~~------g~g~~~a~~sG~~aA~~i~~~l 465 (475)
T 3lov_A 433 PGIYLAGLAYD------GVGLPDCVASAKTMIESIELEQ 465 (475)
T ss_dssp TTEEECSTTTS------CSSHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEccCCC------CCCHHHHHHHHHHHHHHHHHHh
Confidence 68999999754 4578889999999998887654
No 61
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=31.07 E-value=50 Score=27.04 Aligned_cols=35 Identities=17% Similarity=0.073 Sum_probs=27.9
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
.+++.++||+.| |.|++-|+..+...|+.|...+.
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 378999999975 45788899999888888876543
No 62
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=30.58 E-value=16 Score=28.37 Aligned_cols=40 Identities=15% Similarity=0.032 Sum_probs=23.7
Q ss_pred cCCcEEEeccCCCcCCCCcchhhh--hHHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGC--QALEDAVVLGRHIGNL 103 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n--~Al~DA~~La~~L~~~ 103 (177)
.-++|+.+|||+...++...+|.. .+|.+...-|+.+.+.
T Consensus 282 ~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~ 323 (326)
T 3fpz_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp TSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHH
Confidence 346899999998655554444422 2345555555555554
No 63
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=28.50 E-value=31 Score=28.01 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=30.1
Q ss_pred CCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
..+|..+||++....|..|. -...|...+..+|..|..
T Consensus 276 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 318 (431)
T 1q1r_A 276 DPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCG 318 (431)
T ss_dssp STTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcC
Confidence 46899999999887776553 356789999999988864
No 64
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=28.43 E-value=57 Score=26.23 Aligned_cols=35 Identities=9% Similarity=-0.103 Sum_probs=26.1
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~ 102 (177)
.+++.|+||+.+...| | ++.-|++.+...|+.|..
T Consensus 415 ~~~l~~aG~~~~~~~~--g-~v~gA~~SG~~aA~~i~~ 449 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGY--Q-HVDGAVRMGQRTAADIIA 449 (453)
T ss_dssp BTTEEECCGGGCSTTT--T-SHHHHHHHHHHHHHHHHH
T ss_pred cCceEEeecccccccc--c-chHHHHHHHHHHHHHHHH
Confidence 3799999999876444 3 567778888888777765
No 65
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=28.28 E-value=60 Score=24.72 Aligned_cols=40 Identities=13% Similarity=-0.021 Sum_probs=27.9
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
..+|..+||++.... .-.-+..|+.++..+|..|...+.+
T Consensus 279 ~~~vya~GD~~~~~~--~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (335)
T 2zbw_A 279 IPGVYACGDIVTYPG--KLPLIVLGFGEAAIAANHAAAYANP 318 (335)
T ss_dssp STTEEECSTTEECTT--CCCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEeccccccCc--chhhhhhhHHHHHHHHHHHHHHhhh
Confidence 468999999986432 1123456788888888888776554
No 66
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=28.20 E-value=42 Score=28.13 Aligned_cols=39 Identities=18% Similarity=0.099 Sum_probs=30.0
Q ss_pred cCCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
...+|..+||++...++..|. -+..|..++..+|+.|..
T Consensus 294 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 294 SDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 346899999999766665554 266789999999988864
No 67
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=27.77 E-value=27 Score=27.96 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=30.4
Q ss_pred cCCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
...+|..+||++....|..|. -...|+..+..+|..|..
T Consensus 266 ~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 266 SDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp SSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 347899999999888776654 257788888888888764
No 68
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=27.19 E-value=42 Score=27.75 Aligned_cols=38 Identities=13% Similarity=0.084 Sum_probs=29.6
Q ss_pred CCcEEEeccCCCcCCCCcc-----hhhhhHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELG-----QGGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~G-----qG~n~Al~DA~~La~~L~~ 102 (177)
..+|..+||++....+..| +-+..|+.++..++..|..
T Consensus 318 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 318 IPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp STTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 4689999999987655444 3467899999999988864
No 69
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=27.02 E-value=52 Score=25.37 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=24.9
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~ 102 (177)
..++.|.||+.+ |-|++-|+..+..+|+.|..
T Consensus 309 ~~~l~laGd~~~------g~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 309 KPFLACGGDGFT------QSNFDGCITSALCVLEALKN 340 (342)
T ss_dssp TTEEEECSGGGS------CSSHHHHHHHHHHHHHHHTT
T ss_pred CccEEEEccccC------CCCccHHHHHHHHHHHHHHh
Confidence 478999999975 34888888888888877643
No 70
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=25.36 E-value=26 Score=27.40 Aligned_cols=39 Identities=15% Similarity=0.056 Sum_probs=29.7
Q ss_pred cCCcEEEeccCC-----CcCCCCcchhhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAM-----HPMTPELGQGGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAA-----H~~~P~~GqG~n~Al~DA~~La~~L~~ 102 (177)
..++..++|++. +...++.|.|+.+|..-|..|++.|..
T Consensus 318 t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 318 TKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp CSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred CCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 345667778763 445778999999999988888888864
No 71
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=25.28 E-value=40 Score=27.59 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=29.9
Q ss_pred cCCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
...+|..+||++...++..|. -+..|...+..+|+.|..
T Consensus 285 ~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 285 SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 346899999999776665553 346789999999988864
No 72
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=24.88 E-value=33 Score=27.93 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=30.3
Q ss_pred cCCcEEEeccCCCcCCCCcc-----hhhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELG-----QGGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~G-----qG~n~Al~DA~~La~~L~~ 102 (177)
...+|..+||++...++..| +-+..|+.++..++..|..
T Consensus 273 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 273 SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 34689999999987665555 3467899999999988864
No 73
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=24.72 E-value=56 Score=26.16 Aligned_cols=38 Identities=18% Similarity=0.084 Sum_probs=28.7
Q ss_pred cCCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~ 102 (177)
...+|..+||++....+..+. ...|++.+..+|..|..
T Consensus 256 ~~~~IyA~GD~a~~~~~~~~~-~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 256 SIKDIYACGDVAEFYGKNPGL-INIANKQGEVAGLNACG 293 (385)
T ss_dssp SSTTEEECGGGEEETTBCCCC-HHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeeEecCCCcccH-HHHHHHHHHHHHHHhcC
Confidence 457899999999765543343 56789999999988864
No 74
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=24.58 E-value=39 Score=27.43 Aligned_cols=38 Identities=8% Similarity=-0.069 Sum_probs=26.9
Q ss_pred CcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHH
Q 035639 66 GNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNL 103 (177)
Q Consensus 66 grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~ 103 (177)
++|+.+||++|.......+-...|.+-+..|+..+...
T Consensus 410 ~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~~~ 447 (463)
T 3s5w_A 410 VAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQHL 447 (463)
T ss_dssp SEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHHH
T ss_pred CeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHhhc
Confidence 46999999998655544455567777777777666654
No 75
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=23.60 E-value=94 Score=23.25 Aligned_cols=36 Identities=17% Similarity=0.019 Sum_probs=26.8
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLL 104 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~ 104 (177)
..+|..+||++...++ -+..|+.++..+|..|...+
T Consensus 273 ~~~vya~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 273 VQGLFAAGDIRIFAPK----QVVCAASDGATAALSVISYL 308 (311)
T ss_dssp STTEEECSTTBTTCCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEcccccCcchH----HHHHHHHhHHHHHHHHHHHH
Confidence 4689999999875322 35678888888888887654
No 76
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=23.05 E-value=61 Score=26.65 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=29.9
Q ss_pred CCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
..+|..+||++....+..|. -...|+.++..++..|..
T Consensus 310 ~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 310 VQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp STTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 46899999999876655542 367899999999988864
No 77
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=23.03 E-value=66 Score=26.05 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=25.5
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNL 103 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~ 103 (177)
.+++.++||+. .|.|+.-|+..+...|+.|...
T Consensus 440 ~~~l~~aG~~~------~g~gv~gA~~SG~~aA~~i~~~ 472 (478)
T 2ivd_A 440 LPGLHLIGNAY------KGVGLNDCIRNAAQLADALVAG 472 (478)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHCC-
T ss_pred CCCEEEEccCC------CCCCHHHHHHHHHHHHHHHHHh
Confidence 37999999984 2557888888888888887654
No 78
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=22.62 E-value=62 Score=27.34 Aligned_cols=38 Identities=16% Similarity=0.063 Sum_probs=29.0
Q ss_pred CCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
..+|..+||++....+..|. -+..|...+..+|..|..
T Consensus 310 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 310 DPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp STTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 46899999999766655443 456788999999888764
No 79
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=22.26 E-value=1.1e+02 Score=22.81 Aligned_cols=38 Identities=18% Similarity=0.025 Sum_probs=28.1
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLIK 106 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~~ 106 (177)
..+|..+||++..... -+..|+.++...|..|...+.+
T Consensus 269 ~~~vya~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 269 VKGVFAAGDCTTVPYK----QIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp STTEEECSTTBSCSSC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCCcch----hhhhhHhhHHHHHHHHHHHHHH
Confidence 4689999999876432 2457888888888888776543
No 80
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=22.16 E-value=92 Score=25.33 Aligned_cols=37 Identities=22% Similarity=0.117 Sum_probs=28.7
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
.+|+.++|++.+. .+.|+.-|+..+...|+.|...+.
T Consensus 450 ~~~l~faG~~~~~----~~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 450 VDKIYFAGDHLSN----AIAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp BTTEEECSGGGBS----STTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeEHHhcc----CccHHHHHHHHHHHHHHHHHHHHh
Confidence 4799999998752 466788889999888888876543
No 81
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=21.12 E-value=54 Score=26.26 Aligned_cols=38 Identities=18% Similarity=0.101 Sum_probs=29.8
Q ss_pred CCcEEEeccCCCcCCCCc-ch-----hhhhHHHHHHHHHHHHHH
Q 035639 65 KGNVTVAGDAMHPMTPEL-GQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~-Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
..+|..+||++....|.. |. -...|...+..+|..|..
T Consensus 277 ~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 277 LTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp STTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcC
Confidence 468999999998877665 42 257889999999988864
No 82
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=20.78 E-value=1.1e+02 Score=23.58 Aligned_cols=39 Identities=18% Similarity=0.005 Sum_probs=27.7
Q ss_pred CCcEEEeccCCCcCCCCcchhhhhHHHHHHHHHHHHHHHHh
Q 035639 65 KGNVTVAGDAMHPMTPELGQGGCQALEDAVVLGRHIGNLLI 105 (177)
Q Consensus 65 ~grv~LiGDAAH~~~P~~GqG~n~Al~DA~~La~~L~~~~~ 105 (177)
..+|..+||++..... -.-+..|+.++..+|..|...+.
T Consensus 290 ~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~i~~~l~ 328 (360)
T 3ab1_A 290 VDGLYAAGDIAYYPGK--LKIIQTGLSEATMAVRHSLSYIK 328 (360)
T ss_dssp STTEEECSTTEECTTC--CCSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEecCccCCCCc--cceeehhHHHHHHHHHHHHhhcC
Confidence 4689999999864311 12355688889999988887654
No 83
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=20.17 E-value=61 Score=25.98 Aligned_cols=38 Identities=18% Similarity=0.046 Sum_probs=29.5
Q ss_pred cCCcEEEeccCCCcCCCCcch-----hhhhHHHHHHHHHHHHHH
Q 035639 64 SKGNVTVAGDAMHPMTPELGQ-----GGCQALEDAVVLGRHIGN 102 (177)
Q Consensus 64 ~~grv~LiGDAAH~~~P~~Gq-----G~n~Al~DA~~La~~L~~ 102 (177)
...+|..+||++....+. |. -...|...+..+|..|..
T Consensus 266 ~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 266 LAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp SSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHcC
Confidence 357899999999877665 43 147899999999988864
Done!