Query 035640
Match_columns 596
No_of_seqs 327 out of 1830
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 07:41:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035640.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035640hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 1.1E-72 3.6E-77 644.1 44.6 456 52-596 168-655 (656)
2 2xn4_A Kelch-like protein 2; s 100.0 3.3E-33 1.1E-37 286.7 29.3 271 81-445 14-302 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 5.4E-33 1.9E-37 286.7 28.7 274 73-439 16-308 (308)
4 3ii7_A Kelch-like protein 7; p 100.0 5.4E-32 1.9E-36 278.1 28.2 252 123-442 26-296 (306)
5 2vpj_A Kelch-like protein 12; 100.0 1.2E-31 4E-36 274.8 29.0 269 81-439 13-299 (301)
6 1zgk_A Kelch-like ECH-associat 100.0 1.3E-30 4.4E-35 268.9 29.3 256 143-476 15-288 (308)
7 2xn4_A Kelch-like protein 2; s 100.0 2.2E-30 7.7E-35 265.6 28.3 250 151-476 14-277 (302)
8 3ii7_A Kelch-like protein 7; p 100.0 2.6E-30 8.9E-35 265.6 28.1 250 152-476 11-273 (306)
9 2woz_A Kelch repeat and BTB do 100.0 9.2E-31 3.2E-35 270.9 22.9 263 123-449 26-314 (318)
10 4asc_A Kelch repeat and BTB do 100.0 5.8E-31 2E-35 272.1 19.7 263 123-451 15-306 (315)
11 2vpj_A Kelch-like protein 12; 100.0 2.6E-29 8.7E-34 257.3 30.4 248 151-476 13-279 (301)
12 2uvk_A YJHT; unknown function, 100.0 4.6E-29 1.6E-33 261.8 26.4 261 136-454 3-328 (357)
13 4asc_A Kelch repeat and BTB do 100.0 3.2E-28 1.1E-32 251.5 22.9 249 152-476 4-278 (315)
14 2woz_A Kelch repeat and BTB do 100.0 9.7E-28 3.3E-32 248.2 23.7 251 152-476 15-288 (318)
15 1k3i_A Galactose oxidase precu 99.9 3.4E-27 1.2E-31 268.7 21.5 293 123-475 168-497 (656)
16 2uvk_A YJHT; unknown function, 99.9 1.5E-26 5.2E-31 242.7 24.0 275 74-428 12-352 (357)
17 2zwa_A Leucine carboxyl methyl 99.9 6.5E-24 2.2E-28 243.5 28.0 268 61-452 378-675 (695)
18 2zwa_A Leucine carboxyl methyl 99.9 2.1E-21 7.2E-26 222.6 24.2 223 147-476 392-636 (695)
19 4ery_A WD repeat-containing pr 97.7 0.026 8.7E-07 56.1 28.4 246 123-451 47-299 (312)
20 3dsm_A Uncharacterized protein 97.7 0.024 8.2E-07 57.7 27.2 269 122-474 18-301 (328)
21 3ow8_A WD repeat-containing pr 97.6 0.024 8.1E-07 57.4 26.2 221 148-452 87-311 (321)
22 1gxr_A ESG1, transducin-like e 97.5 0.03 1E-06 55.4 25.1 221 147-452 103-327 (337)
23 3no2_A Uncharacterized protein 97.5 0.02 7E-07 57.1 22.9 216 152-450 4-231 (276)
24 3zwl_B Eukaryotic translation 97.4 0.055 1.9E-06 54.1 26.1 271 123-453 56-337 (369)
25 3bws_A Protein LP49; two-domai 97.4 0.052 1.8E-06 56.4 26.3 255 123-451 146-420 (433)
26 1k8k_C P40, ARP2/3 complex 41 97.4 0.028 9.7E-07 56.6 23.3 90 123-217 32-123 (372)
27 3no2_A Uncharacterized protein 97.4 0.014 4.7E-07 58.4 20.6 205 123-389 17-230 (276)
28 3vgz_A Uncharacterized protein 97.4 0.13 4.6E-06 51.2 28.8 248 122-451 70-334 (353)
29 2z2n_A Virginiamycin B lyase; 97.4 0.12 4E-06 50.3 28.4 240 123-450 38-284 (299)
30 1got_B GT-beta; complex (GTP-b 97.4 0.035 1.2E-06 56.3 23.6 248 123-453 79-334 (340)
31 1vyh_C Platelet-activating fac 97.3 0.033 1.1E-06 58.3 23.2 256 123-453 132-402 (410)
32 3hfq_A Uncharacterized protein 97.2 0.025 8.5E-07 57.2 20.3 93 122-217 19-113 (347)
33 2pbi_B Guanine nucleotide-bind 97.1 0.17 5.8E-06 51.7 25.9 250 122-452 87-347 (354)
34 2pbi_B Guanine nucleotide-bind 97.1 0.18 6.3E-06 51.4 25.8 231 149-453 72-306 (354)
35 4aez_A CDC20, WD repeat-contai 97.1 0.1 3.5E-06 54.1 24.0 252 122-452 114-370 (401)
36 1l0q_A Surface layer protein; 97.1 0.21 7.2E-06 50.8 26.1 243 123-451 14-264 (391)
37 2ynn_A Coatomer subunit beta'; 97.0 0.099 3.4E-06 52.0 22.3 87 123-217 37-124 (304)
38 3u4y_A Uncharacterized protein 97.0 0.19 6.6E-06 49.8 24.0 91 122-220 21-117 (331)
39 3dsm_A Uncharacterized protein 96.9 0.21 7.2E-06 50.6 24.2 215 165-449 16-243 (328)
40 2qc5_A Streptogramin B lactona 96.9 0.33 1.1E-05 47.0 27.0 241 123-450 43-290 (300)
41 4e54_B DNA damage-binding prot 96.9 0.26 8.9E-06 51.6 25.6 90 123-217 144-236 (435)
42 3vl1_A 26S proteasome regulato 96.9 0.37 1.3E-05 49.4 26.1 88 122-217 120-208 (420)
43 3vl1_A 26S proteasome regulato 96.9 0.13 4.6E-06 52.8 22.5 235 149-452 105-355 (420)
44 1r5m_A SIR4-interacting protei 96.8 0.11 3.7E-06 53.1 21.0 51 123-178 132-182 (425)
45 3q7m_A Lipoprotein YFGL, BAMB; 96.8 0.58 2E-05 47.7 28.2 128 262-450 237-367 (376)
46 4ery_A WD repeat-containing pr 96.8 0.31 1.1E-05 48.1 23.5 222 149-453 31-259 (312)
47 3u4y_A Uncharacterized protein 96.8 0.37 1.3E-05 47.7 24.0 141 122-285 63-210 (331)
48 3dwl_C Actin-related protein 2 96.7 0.026 8.8E-07 57.5 15.4 234 148-452 18-272 (377)
49 3jrp_A Fusion protein of prote 96.7 0.066 2.2E-06 53.8 18.3 244 149-453 19-278 (379)
50 3ei3_B DNA damage-binding prot 96.7 0.36 1.2E-05 49.1 23.7 90 123-217 98-190 (383)
51 3hfq_A Uncharacterized protein 96.7 0.25 8.6E-06 49.6 22.2 132 55-217 23-167 (347)
52 2ymu_A WD-40 repeat protein; u 96.6 0.31 1E-05 52.5 24.1 241 123-452 327-570 (577)
53 3fvz_A Peptidyl-glycine alpha- 96.6 0.66 2.2E-05 46.7 25.2 150 122-289 70-234 (329)
54 1got_B GT-beta; complex (GTP-b 96.6 0.39 1.4E-05 48.4 23.5 225 149-452 63-291 (340)
55 1q7f_A NHL, brain tumor CG1071 96.6 0.57 1.9E-05 45.5 26.7 221 149-449 37-268 (286)
56 1gxr_A ESG1, transducin-like e 96.6 0.28 9.5E-06 48.2 21.6 222 148-452 58-286 (337)
57 3iz6_a 40S ribosomal protein R 96.6 0.48 1.6E-05 48.7 24.1 238 148-453 73-320 (380)
58 3iz6_a 40S ribosomal protein R 96.6 0.46 1.6E-05 48.8 24.0 50 122-174 89-138 (380)
59 3scy_A Hypothetical bacterial 96.6 0.78 2.7E-05 46.3 25.5 93 122-217 30-125 (361)
60 2ynn_A Coatomer subunit beta'; 96.5 0.11 3.9E-06 51.5 18.5 225 148-453 20-250 (304)
61 2aq5_A Coronin-1A; WD40 repeat 96.5 0.12 4.2E-06 53.3 19.3 233 149-451 89-333 (402)
62 3fm0_A Protein CIAO1; WDR39,SG 96.5 0.17 5.7E-06 51.4 20.1 139 123-286 40-185 (345)
63 3sfz_A APAF-1, apoptotic pepti 96.5 0.33 1.1E-05 58.0 25.1 254 123-453 639-904 (1249)
64 4g56_B MGC81050 protein; prote 96.5 0.29 9.9E-06 50.0 21.5 64 148-217 101-166 (357)
65 1ri6_A Putative isomerase YBHE 96.5 0.59 2E-05 46.0 23.1 66 350-430 254-322 (343)
66 1k8k_C P40, ARP2/3 complex 41 96.4 0.09 3.1E-06 52.9 17.2 64 148-217 15-79 (372)
67 1erj_A Transcriptional repress 96.4 0.38 1.3E-05 49.7 22.2 52 123-178 147-198 (393)
68 1nr0_A Actin interacting prote 96.4 1 3.6E-05 49.5 27.0 89 123-217 214-309 (611)
69 2ovr_B FBW7, F-BOX/WD repeat p 96.4 0.73 2.5E-05 48.1 24.4 243 122-454 180-430 (445)
70 1pgu_A Actin interacting prote 96.4 0.51 1.8E-05 50.9 23.9 251 123-453 41-319 (615)
71 3jrp_A Fusion protein of prote 96.3 0.23 8E-06 49.7 19.5 89 123-217 35-130 (379)
72 2hes_X YDR267CP; beta-propelle 96.3 0.27 9.4E-06 49.4 20.0 261 123-453 36-319 (330)
73 3ow8_A WD repeat-containing pr 96.3 1 3.5E-05 45.1 25.0 135 122-286 103-241 (321)
74 2pm9_A Protein WEB1, protein t 96.3 0.94 3.2E-05 46.1 24.3 267 122-452 46-327 (416)
75 1ri6_A Putative isomerase YBHE 96.3 0.52 1.8E-05 46.4 21.5 68 147-217 43-111 (343)
76 1rwi_B Serine/threonine-protei 96.3 0.85 2.9E-05 43.6 26.0 226 148-475 30-264 (270)
77 1rwi_B Serine/threonine-protei 96.3 0.86 3E-05 43.5 24.9 132 123-285 48-183 (270)
78 1r5m_A SIR4-interacting protei 96.2 0.63 2.2E-05 47.2 22.5 63 147-217 114-176 (425)
79 3dwl_C Actin-related protein 2 96.2 0.12 4.1E-06 52.4 16.9 89 123-217 35-127 (377)
80 3v9f_A Two-component system se 96.2 2.4 8.1E-05 48.2 36.5 249 123-451 385-647 (781)
81 4gga_A P55CDC, cell division c 96.2 0.39 1.3E-05 49.9 21.1 82 122-211 126-209 (420)
82 3mkq_A Coatomer beta'-subunit; 96.2 0.41 1.4E-05 54.0 22.6 87 123-217 37-124 (814)
83 2ymu_A WD-40 repeat protein; u 96.1 1.2 4E-05 47.8 24.6 242 123-452 286-529 (577)
84 3scy_A Hypothetical bacterial 96.1 1.4 4.9E-05 44.2 24.9 27 259-285 216-245 (361)
85 3jro_A Fusion protein of prote 96.1 0.079 2.7E-06 60.5 15.8 244 149-453 17-276 (753)
86 1l0q_A Surface layer protein; 96.0 0.93 3.2E-05 45.9 22.3 209 153-450 2-218 (391)
87 3odt_A Protein DOA1; ubiquitin 96.0 1 3.5E-05 43.5 21.8 89 123-217 41-129 (313)
88 1nir_A Nitrite reductase; hemo 96.0 0.34 1.2E-05 53.1 19.9 280 122-477 160-460 (543)
89 2pm7_B Protein transport prote 96.0 1.1 3.8E-05 44.0 22.0 68 149-222 17-88 (297)
90 3fm0_A Protein CIAO1; WDR39,SG 95.9 0.13 4.6E-06 52.1 15.4 60 378-453 157-216 (345)
91 4ggc_A P55CDC, cell division c 95.9 1.2 4.1E-05 43.2 21.9 57 147-211 73-129 (318)
92 1vyh_C Platelet-activating fac 95.9 0.8 2.7E-05 47.6 21.6 87 123-217 174-261 (410)
93 1p22_A F-BOX/WD-repeat protein 95.8 1.4 4.7E-05 45.9 23.2 135 123-289 155-292 (435)
94 1nr0_A Actin interacting prote 95.8 2.2 7.6E-05 46.8 26.0 59 147-210 65-124 (611)
95 3i2n_A WD repeat-containing pr 95.8 0.62 2.1E-05 46.2 19.5 141 122-285 45-202 (357)
96 3sfz_A APAF-1, apoptotic pepti 95.8 0.5 1.7E-05 56.4 21.9 246 123-453 985-1240(1249)
97 2pm7_B Protein transport prote 95.8 1.6 5.4E-05 42.9 22.1 60 152-217 66-128 (297)
98 3vgz_A Uncharacterized protein 95.7 1.3 4.6E-05 43.7 21.5 123 149-290 48-181 (353)
99 3bws_A Protein LP49; two-domai 95.4 1.7 5.7E-05 44.7 21.8 138 122-289 192-341 (433)
100 2ovr_B FBW7, F-BOX/WD repeat p 95.3 3.1 0.00011 43.1 23.7 235 123-452 141-381 (445)
101 4aez_A CDC20, WD repeat-contai 95.3 3 0.0001 42.7 25.5 215 122-416 157-381 (401)
102 2z2n_A Virginiamycin B lyase; 95.3 2.2 7.4E-05 41.0 25.0 131 123-286 80-216 (299)
103 2pm9_A Protein WEB1, protein t 95.2 1.2 4.2E-05 45.2 19.9 116 147-289 171-301 (416)
104 3mkq_A Coatomer beta'-subunit; 95.2 1.3 4.4E-05 49.8 21.5 223 148-453 20-250 (814)
105 1sq9_A Antiviral protein SKI8; 95.1 1.7 5.9E-05 43.8 20.4 58 154-217 82-153 (397)
106 1nir_A Nitrite reductase; hemo 95.1 1.7 5.7E-05 47.5 21.3 228 149-450 145-389 (543)
107 4d9s_A UVB-resistance protein 95.0 1.3 4.4E-05 46.5 19.5 72 374-454 287-359 (406)
108 3jro_A Fusion protein of prote 94.9 0.73 2.5E-05 52.4 18.5 89 123-217 33-128 (753)
109 3k26_A Polycomb protein EED; W 94.9 1 3.4E-05 44.7 17.6 90 123-217 97-188 (366)
110 1yfq_A Cell cycle arrest prote 94.9 3.2 0.00011 40.7 22.5 63 148-217 63-127 (342)
111 4gqb_B Methylosome protein 50; 94.8 1.7 5.7E-05 44.3 19.3 226 148-453 89-322 (344)
112 4e54_B DNA damage-binding prot 94.7 3.8 0.00013 42.5 22.2 87 122-217 188-278 (435)
113 3dm0_A Maltose-binding peripla 94.7 3.7 0.00013 45.7 23.2 50 122-174 453-502 (694)
114 3zwl_B Eukaryotic translation 94.6 1.3 4.3E-05 43.9 17.6 230 148-454 39-282 (369)
115 3mmy_A MRNA export factor; mRN 94.6 3.7 0.00013 40.3 22.9 87 123-217 66-156 (368)
116 1jmx_B Amine dehydrogenase; ox 94.6 1.8 6E-05 42.7 18.5 66 149-220 7-74 (349)
117 3v7d_B Cell division control p 94.6 5.1 0.00017 41.5 25.4 134 260-450 275-410 (464)
118 3lrv_A PRE-mRNA-splicing facto 94.6 4.2 0.00014 40.6 22.3 136 123-284 106-246 (343)
119 4h5i_A Guanine nucleotide-exch 94.5 4.7 0.00016 41.0 25.5 58 378-453 276-334 (365)
120 4g56_B MGC81050 protein; prote 94.5 1.5 5.3E-05 44.5 18.0 120 147-287 48-175 (357)
121 2xbg_A YCF48-like protein; pho 94.4 4.8 0.00016 40.5 23.6 75 360-451 193-269 (327)
122 4a11_B DNA excision repair pro 94.4 3.6 0.00012 41.2 20.5 61 149-217 107-171 (408)
123 3v7d_B Cell division control p 94.3 5.6 0.00019 41.2 26.6 103 261-416 318-422 (464)
124 3bg1_A Protein SEC13 homolog; 94.3 1.2 4.1E-05 44.3 16.3 66 150-221 22-91 (316)
125 4a2l_A BT_4663, two-component 94.2 9.4 0.00032 43.3 36.6 252 123-451 379-650 (795)
126 3q7m_A Lipoprotein YFGL, BAMB; 94.0 5.9 0.0002 40.0 22.7 218 147-450 48-285 (376)
127 1q7f_A NHL, brain tumor CG1071 93.7 2.9 9.8E-05 40.4 17.5 140 256-451 78-226 (286)
128 1erj_A Transcriptional repress 93.7 6.3 0.00022 40.2 21.1 111 148-286 71-200 (393)
129 2hqs_A Protein TOLB; TOLB, PAL 93.6 7.7 0.00026 40.2 21.9 60 377-453 316-375 (415)
130 4aow_A Guanine nucleotide-bind 93.5 5.1 0.00018 39.0 19.2 58 149-211 46-108 (340)
131 3nol_A Glutamine cyclotransfer 93.5 6.5 0.00022 38.9 19.5 37 141-180 42-78 (262)
132 2iwa_A Glutamine cyclotransfer 93.1 5.1 0.00017 39.7 18.3 187 193-453 24-228 (266)
133 3i2n_A WD repeat-containing pr 93.0 2.8 9.7E-05 41.2 16.5 66 149-217 26-95 (357)
134 4gga_A P55CDC, cell division c 92.9 9.4 0.00032 39.2 23.9 87 122-217 170-257 (420)
135 2vdu_B TRNA (guanine-N(7)-)-me 92.7 11 0.00036 39.2 23.8 60 147-211 108-171 (450)
136 1pgu_A Actin interacting prote 92.7 7.5 0.00025 41.5 20.5 65 144-217 21-93 (615)
137 3dm0_A Maltose-binding peripla 92.7 12 0.0004 41.5 22.7 55 378-451 568-622 (694)
138 2dg1_A DRP35, lactonase; beta 92.6 8.3 0.00028 37.9 25.0 56 147-208 50-105 (333)
139 1pjx_A Dfpase, DIISOPROPYLFLUO 92.6 7.8 0.00027 37.5 22.9 65 149-219 25-100 (314)
140 2ojh_A Uncharacterized protein 92.6 6.8 0.00023 36.8 21.8 81 122-209 23-104 (297)
141 4h5i_A Guanine nucleotide-exch 92.5 10 0.00035 38.4 20.6 143 261-453 141-291 (365)
142 3mbr_X Glutamine cyclotransfer 92.5 8.6 0.00029 37.6 20.7 61 141-206 20-80 (243)
143 2xbg_A YCF48-like protein; pho 92.5 9.7 0.00033 38.2 25.9 74 360-451 235-312 (327)
144 2vdu_B TRNA (guanine-N(7)-)-me 92.1 11 0.00037 39.2 20.3 22 382-416 251-272 (450)
145 1pby_B Quinohemoprotein amine 92.1 9.1 0.00031 37.0 21.8 30 260-289 141-170 (337)
146 1p22_A F-BOX/WD-repeat protein 92.1 9.6 0.00033 39.3 19.8 58 151-217 141-198 (435)
147 3odt_A Protein DOA1; ubiquitin 92.0 8.8 0.0003 36.7 20.0 60 151-217 27-86 (313)
148 3gre_A Serine/threonine-protei 91.6 5.5 0.00019 40.9 17.2 65 147-217 69-138 (437)
149 3frx_A Guanine nucleotide-bind 91.6 11 0.00039 37.0 21.6 136 122-287 88-232 (319)
150 4a11_B DNA excision repair pro 91.3 4 0.00014 40.9 15.4 25 147-174 49-74 (408)
151 1sq9_A Antiviral protein SKI8; 91.3 7 0.00024 39.2 17.3 29 261-289 241-274 (397)
152 3hrp_A Uncharacterized protein 91.2 16 0.00053 38.0 22.9 111 147-285 136-252 (409)
153 3fvz_A Peptidyl-glycine alpha- 91.1 13 0.00044 36.9 30.7 245 147-452 29-312 (329)
154 1jmx_B Amine dehydrogenase; ox 91.1 3.6 0.00012 40.4 14.5 140 123-289 23-182 (349)
155 2bkl_A Prolyl endopeptidase; m 91.0 20 0.00069 39.7 22.2 117 75-217 125-255 (695)
156 3ei3_B DNA damage-binding prot 90.4 16 0.00053 36.6 23.7 87 123-217 143-232 (383)
157 4aow_A Guanine nucleotide-bind 90.1 14 0.00049 35.7 24.2 64 147-217 92-155 (340)
158 2xzm_R RACK1; ribosome, transl 89.9 16 0.00056 36.1 21.3 50 122-174 99-148 (343)
159 3mmy_A MRNA export factor; mRN 89.7 5 0.00017 39.4 14.3 105 153-285 54-163 (368)
160 3lrv_A PRE-mRNA-splicing facto 89.7 13 0.00045 36.8 17.5 87 123-217 151-240 (343)
161 3f3f_A Nucleoporin SEH1; struc 89.6 15 0.00051 35.2 23.7 60 152-217 70-139 (351)
162 3frx_A Guanine nucleotide-bind 89.3 18 0.0006 35.6 20.0 62 148-217 72-134 (319)
163 3e5z_A Putative gluconolactona 89.0 6.1 0.00021 38.3 14.1 135 123-284 92-248 (296)
164 1yfq_A Cell cycle arrest prote 88.9 18 0.00061 35.1 18.4 62 148-217 18-84 (342)
165 2hqs_A Protein TOLB; TOLB, PAL 88.6 17 0.00057 37.6 18.0 136 122-286 204-348 (415)
166 2qc5_A Streptogramin B lactona 88.4 17 0.0006 34.4 25.9 218 148-451 26-249 (300)
167 3nok_A Glutaminyl cyclase; bet 88.2 21 0.00073 35.2 20.9 178 198-451 62-255 (268)
168 2iwa_A Glutamine cyclotransfer 87.4 19 0.00066 35.5 16.4 108 256-416 22-136 (266)
169 3vu4_A KMHSV2; beta-propeller 86.2 29 0.00099 34.7 21.1 59 378-453 202-262 (355)
170 2ecf_A Dipeptidyl peptidase IV 85.7 23 0.00077 39.2 18.0 116 148-286 43-185 (741)
171 2ecf_A Dipeptidyl peptidase IV 85.7 47 0.0016 36.6 26.8 110 74-217 40-177 (741)
172 3nol_A Glutamine cyclotransfer 85.3 18 0.0006 35.7 14.7 101 262-416 50-156 (262)
173 2hes_X YDR267CP; beta-propelle 84.7 11 0.00036 37.5 13.3 100 321-453 118-221 (330)
174 1pjx_A Dfpase, DIISOPROPYLFLUO 84.1 31 0.001 33.1 19.9 80 123-208 48-135 (314)
175 4gqb_B Methylosome protein 50; 83.5 16 0.00054 36.8 14.1 93 122-220 150-246 (344)
176 3a72_A EXO-arabinanase; arabin 81.9 15 0.00051 37.8 13.2 170 254-448 23-221 (355)
177 3mbr_X Glutamine cyclotransfer 81.8 32 0.0011 33.4 14.9 106 259-416 25-134 (243)
178 3g4e_A Regucalcin; six bladed 80.8 15 0.0005 35.9 12.4 143 123-289 75-236 (297)
179 1pby_B Quinohemoprotein amine 79.8 44 0.0015 32.0 19.4 61 154-220 2-65 (337)
180 3e5z_A Putative gluconolactona 79.3 45 0.0015 31.9 24.6 67 146-221 32-100 (296)
181 2dg1_A DRP35, lactonase; beta 77.9 18 0.00061 35.4 12.0 83 123-207 68-152 (333)
182 3pe7_A Oligogalacturonate lyas 77.7 58 0.002 32.2 21.6 79 122-205 61-140 (388)
183 3f3f_A Nucleoporin SEH1; struc 76.3 8.8 0.0003 36.9 9.0 103 321-453 22-134 (351)
184 3nok_A Glutaminyl cyclase; bet 75.9 37 0.0013 33.5 13.3 102 261-416 61-165 (268)
185 2aq5_A Coronin-1A; WD40 repeat 75.9 19 0.00065 36.4 11.9 94 122-217 199-295 (402)
186 3ott_A Two-component system se 73.9 1.2E+02 0.004 33.9 25.2 132 263-451 481-617 (758)
187 3k26_A Polycomb protein EED; W 73.4 35 0.0012 33.1 12.8 60 378-453 122-183 (366)
188 2xyi_A Probable histone-bindin 72.6 88 0.003 31.9 18.2 64 148-217 135-209 (430)
189 3bg1_A Protein SEC13 homolog; 69.6 8.8 0.0003 37.8 7.3 56 382-453 70-127 (316)
190 3hrp_A Uncharacterized protein 67.7 1.1E+02 0.0039 31.3 18.4 31 256-286 132-165 (409)
191 3v9f_A Two-component system se 66.5 1.7E+02 0.0057 32.7 21.4 138 123-289 471-617 (781)
192 2p9w_A MAL S 1 allergenic prot 65.4 88 0.003 31.8 13.7 92 348-451 99-204 (334)
193 1w8o_A Bacterial sialidase; 3D 65.3 19 0.00066 39.3 9.6 133 415-581 305-438 (601)
194 3dr2_A Exported gluconolactona 64.6 49 0.0017 32.1 11.6 137 123-285 109-270 (305)
195 2oaj_A Protein SNI1; WD40 repe 63.9 2.1E+02 0.0071 32.9 22.6 106 148-285 24-132 (902)
196 3g4e_A Regucalcin; six bladed 62.3 49 0.0017 32.0 11.1 55 377-449 59-115 (297)
197 2xzm_R RACK1; ribosome, transl 62.2 1E+02 0.0034 30.2 13.6 26 378-416 125-150 (343)
198 2ojh_A Uncharacterized protein 61.6 99 0.0034 28.4 15.2 90 122-217 111-200 (297)
199 4ggc_A P55CDC, cell division c 61.4 1.1E+02 0.0037 28.8 23.5 88 122-217 90-177 (318)
200 3mvd_K Regulator of chromosome 60.5 1.5E+02 0.0053 30.3 18.1 65 381-454 260-324 (423)
201 2p4o_A Hypothetical protein; p 59.1 1.3E+02 0.0045 29.0 14.6 112 256-416 33-148 (306)
202 3sjl_D Methylamine dehydrogena 57.8 1.8E+02 0.006 30.1 18.9 55 122-178 110-171 (386)
203 2ad6_A Methanol dehydrogenase 57.5 1.2E+02 0.004 33.0 14.1 121 262-423 60-192 (571)
204 3dw8_B Serine/threonine-protei 55.7 1.7E+02 0.0058 29.2 14.5 65 147-217 232-311 (447)
205 3dr2_A Exported gluconolactona 52.4 1.6E+02 0.0054 28.3 12.9 67 377-450 136-207 (305)
206 3o4h_A Acylamino-acid-releasin 51.7 19 0.00065 38.7 6.4 89 122-217 176-272 (582)
207 3tc9_A Hypothetical hydrolase; 51.2 1.5E+02 0.005 30.8 13.1 130 264-450 149-289 (430)
208 3hxj_A Pyrrolo-quinoline quino 49.8 1.8E+02 0.006 27.7 18.6 21 261-281 144-165 (330)
209 3vu4_A KMHSV2; beta-propeller 47.0 84 0.0029 31.1 10.1 62 378-452 247-326 (355)
210 3azo_A Aminopeptidase; POP fam 46.1 1.8E+02 0.0061 31.3 13.3 90 122-217 266-363 (662)
211 2xyi_A Probable histone-bindin 45.3 2.5E+02 0.0087 28.2 20.5 65 148-217 188-259 (430)
212 3c5m_A Oligogalacturonate lyas 45.0 1.3E+02 0.0043 29.5 11.0 56 123-182 266-335 (396)
213 2j04_A TAU60, YPL007P, hypothe 42.4 2.4E+02 0.0082 30.9 13.2 65 146-217 134-207 (588)
214 4a2l_A BT_4663, two-component 41.9 4E+02 0.014 29.6 30.5 77 123-206 237-326 (795)
215 3gre_A Serine/threonine-protei 41.6 70 0.0024 32.3 8.6 90 122-217 193-288 (437)
216 1qks_A Cytochrome CD1 nitrite 38.8 4E+02 0.014 28.7 22.7 110 151-290 165-283 (567)
217 3azo_A Aminopeptidase; POP fam 38.8 1.5E+02 0.0051 31.9 11.2 92 122-217 218-319 (662)
218 2fp8_A Strictosidine synthase; 38.3 2.8E+02 0.0095 26.7 16.4 93 350-451 208-302 (322)
219 3ott_A Two-component system se 36.9 4.6E+02 0.016 28.8 15.6 126 123-282 495-626 (758)
220 1w6s_A Methanol dehydrogenase 36.7 2.1E+02 0.0072 31.3 11.9 155 261-452 59-262 (599)
221 3dw8_B Serine/threonine-protei 35.6 1.1E+02 0.0037 30.7 8.8 62 147-217 291-369 (447)
222 4hw6_A Hypothetical protein, I 34.6 4E+02 0.014 27.4 13.7 32 256-287 140-176 (433)
223 2xdw_A Prolyl endopeptidase; a 33.7 5E+02 0.017 28.2 23.1 109 75-209 129-252 (710)
224 3mvd_K Regulator of chromosome 33.3 86 0.0029 32.3 7.7 73 374-454 304-376 (423)
225 2vov_A MOPE, surface-associate 32.6 51 0.0017 30.6 4.9 34 556-595 277-331 (336)
226 2p4o_A Hypothetical protein; p 32.5 3.4E+02 0.012 25.9 26.3 77 73-182 34-110 (306)
227 3sjl_D Methylamine dehydrogena 32.4 4.3E+02 0.015 27.1 13.2 85 349-452 109-208 (386)
228 2ghs_A AGR_C_1268P; regucalcin 32.3 2.6E+02 0.0089 27.1 10.9 54 378-449 96-151 (326)
229 1k32_A Tricorn protease; prote 32.1 2.1E+02 0.0073 33.1 11.6 84 122-209 401-491 (1045)
230 2ghs_A AGR_C_1268P; regucalcin 30.5 3.3E+02 0.011 26.4 11.3 75 123-206 73-150 (326)
231 1tl2_A L10, protein (tachylect 30.3 3.7E+02 0.012 25.8 10.8 101 147-271 93-199 (236)
232 1kv9_A Type II quinohemoprotei 30.2 1.4E+02 0.0047 33.1 9.1 99 320-451 65-171 (668)
233 2jkb_A Sialidase B; intramolec 30.1 6.1E+02 0.021 28.2 16.3 39 411-449 617-657 (686)
234 4hw6_A Hypothetical protein, I 29.2 4.9E+02 0.017 26.8 24.4 48 153-208 153-200 (433)
235 2fp8_A Strictosidine synthase; 28.5 4E+02 0.014 25.5 19.4 90 123-217 103-212 (322)
236 1yiq_A Quinohemoprotein alcoho 27.6 2E+02 0.0067 32.0 9.8 99 320-451 69-176 (689)
237 1qks_A Cytochrome CD1 nitrite 26.5 1.5E+02 0.0052 32.1 8.5 84 349-451 177-263 (567)
238 3pe7_A Oligogalacturonate lyas 26.2 1.8E+02 0.0061 28.5 8.4 60 122-182 265-335 (388)
239 1flg_A Protein (quinoprotein e 25.3 3.3E+02 0.011 29.4 11.0 27 261-287 65-94 (582)
240 2z3z_A Dipeptidyl aminopeptida 24.9 6.6E+02 0.023 26.9 25.9 58 378-450 362-419 (706)
241 3tc9_A Hypothetical hydrolase; 23.3 3.2E+02 0.011 28.1 9.9 59 144-207 228-288 (430)
242 1kb0_A Quinohemoprotein alcoho 22.7 2.2E+02 0.0076 31.4 9.0 99 320-451 76-183 (677)
243 1kb0_A Quinohemoprotein alcoho 22.5 7.8E+02 0.027 26.9 16.2 121 262-423 75-206 (677)
244 3hxj_A Pyrrolo-quinoline quino 22.2 4.9E+02 0.017 24.4 20.6 47 152-206 107-153 (330)
245 3a72_A EXO-arabinanase; arabin 22.2 1.2E+02 0.004 31.0 6.1 67 375-449 26-104 (355)
246 1jof_A Carboxy-CIS,CIS-muconat 21.8 2.9E+02 0.01 27.0 9.1 49 122-172 168-221 (365)
247 2qe8_A Uncharacterized protein 21.3 1.4E+02 0.0047 29.4 6.4 58 377-452 253-311 (343)
248 2ad6_A Methanol dehydrogenase 21.1 1.9E+02 0.0065 31.2 7.9 98 320-450 61-168 (571)
249 1yiq_A Quinohemoprotein alcoho 21.1 8.4E+02 0.029 26.7 15.5 25 262-286 68-95 (689)
250 3c75_H MADH, methylamine dehyd 20.5 7.2E+02 0.025 25.7 12.4 25 266-290 86-116 (426)
251 2z3z_A Dipeptidyl aminopeptida 20.2 5.3E+02 0.018 27.7 11.5 83 122-209 336-420 (706)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.1e-72 Score=644.14 Aligned_cols=456 Identities=22% Similarity=0.327 Sum_probs=355.5
Q ss_pred ccccCCCCCceEeccCCCcccceeeeeccC-CCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCC
Q 035640 52 KIAETGYNGKWELVSENSGVSAMHAILLPK-INKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFET 130 (596)
Q Consensus 52 ~~~~~~~~g~W~~v~~~~~~~a~~~~ll~~-~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t 130 (596)
-..+++..++|+.+.+. +..+.|++++ + +||||++||.+... + ++ .......+.+|||.+
T Consensus 168 ~~~~dp~~~~W~~~~~~-P~~~~~~av~-~~~g~l~v~GG~~~~~--~----~~-----------~~~~~~~~~~yd~~t 228 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDL-PIVPAAAAIE-PTSGRVLMWSSYRNDA--F----GG-----------SPGGITLTSSWDPST 228 (656)
T ss_dssp CCCCCTTSCEEEEEEEC-SSCCSEEEEE-TTTTEEEEEEECCCTT--T----CS-----------CCCSEEEEEEECTTT
T ss_pred cccCCCCCCeeeeeccC-CCCceeEEEE-ecCCEEEEEecccccc--c----cc-----------CCCCeEEEEEEeCCC
Confidence 45689999999998665 4467789988 6 99999999975211 0 10 001134688999999
Q ss_pred CCEEeCcCC---CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEc
Q 035640 131 SELTALKLQ---TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVG 207 (596)
Q Consensus 131 ~~w~~l~~~---~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViG 207 (596)
++|+.+..+ ++.+|++.+++.||+||++||... .++++|||. +++|+++++ |+.+||++++++++||+|||+|
T Consensus 229 ~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~-t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv~G 304 (656)
T 1k3i_A 229 GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS-SDSWIPGPD-MQVARGYQSSATMSDGRVFTIG 304 (656)
T ss_dssp CCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG-GTEEEECCC-CSSCCSSCEEEECTTSCEEEEC
T ss_pred CcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc-CCceeECCC-CCccccccceEEecCCeEEEEe
Confidence 999988755 567898888889999999999764 379999999 999999985 9999999999999999999999
Q ss_pred CCCC-----CcEEEe-CCCCCCCCCc--ccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc------
Q 035640 208 GRGA-----FSYEYI-PPEGQSNKSP--VFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN------ 273 (596)
Q Consensus 208 G~~~-----~~~E~y-P~~~~w~~~~--~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~------ 273 (596)
|... .++|+| |.+++|.... ...|+.... + ...+..+++||++||.
T Consensus 305 G~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-------------------~-~~~~~~~~~iyv~Gg~~g~~~~ 364 (656)
T 1k3i_A 305 GSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-------------------K-QGLYRSDNHAWLFGWKKGSVFQ 364 (656)
T ss_dssp CCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-------------------T-TGGGTTTCSCCEEECGGGCEEE
T ss_pred CcccCCcccccceEeCCCCCcceeCCCcccccccccc-------------------c-cceeecCCceEEEECCCCcEEE
Confidence 9532 578999 9999885210 012222110 0 1122457788888753
Q ss_pred -----eeEEecCCCCeEEEeeccccCCC--CCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccC
Q 035640 274 -----RSILLDPKANKVVREFPILTGGS--RNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFP 346 (596)
Q Consensus 274 -----~~e~yDp~t~~w~~~lp~mp~~~--R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~ 346 (596)
..++||+.+++|+......+... ...+.+++++|++. .+++||++||.+... ...
T Consensus 365 ~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~---------~~~~i~v~GG~~~~~---------~~~ 426 (656)
T 1k3i_A 365 AGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA---------VKGKILTFGGSPDYQ---------DSD 426 (656)
T ss_dssp CCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET---------TTTEEEEECCBSSSS---------SSB
T ss_pred ecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccC---------CCCeEEEEeCCCCCC---------CCC
Confidence 36899999999985433222100 01234678887653 489999999975211 013
Q ss_pred CCCceEEEEeeCC-CCceEee---cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceE
Q 035640 347 ALQDCGRIDITKP-NAVWKKE---RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFK 422 (596)
Q Consensus 347 a~~s~~~id~~~~-~~~W~~~---~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt 422 (596)
+++.|.++++.++ +++|+.. +|+.+|.+|++++++||+|||+||.+.+. +|. +.+++.++|+|||+++ +|+
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~ 501 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFY 501 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEE
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---cee
Confidence 4665655555554 6789864 89999999998899999999999987542 222 3456778999999999 999
Q ss_pred EecCCCcccccceEEEEcCCCcEEEecCCCCCccccCCCCCCcceEEEEcCCCCCC--CCCCCCCeeeeCCCCCeeecCC
Q 035640 423 ELAAGTIPRMYHSSSVLLPDGTVLVAGSNTHNGYILDAKYPTELRVEKFSPPYLDP--SLAWLRPSIVVDSSDKVIHYGQ 500 (596)
Q Consensus 423 ~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl~~--~~~~~RP~i~~~~~p~~~~~g~ 500 (596)
.+++|+++|.|||+++||+||+|||+||+.++.+. ++++++|+|+||||+. +..+.||+|++.. |+++.||+
T Consensus 502 ~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~-----~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~-~~~~~~g~ 575 (656)
T 1k3i_A 502 KQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCT-----TNHFDAQIFTPNYLYNSNGNLATRPKITRTS-TQSVKVGG 575 (656)
T ss_dssp ECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCS-----CCCCEEEEEECGGGBCTTSSBCCCCCEEEES-CSEEETTC
T ss_pred ecCCCCCccccccHhhcCCCcEEEecCCCCCCCCC-----CCeeEEEEEeChhhccCCCCcCCCCcccccC-CceecCCC
Confidence 99999999999999999999999999999887542 3588999999999964 3446799999843 89999999
Q ss_pred eEEEEEEeccccccccCeEEEEEEeCCcccccCCCCCceEEeeeeeeeeccCCCCCCceEEEEEcCCCCCcCCCcceEEE
Q 035640 501 RFSVKVKSNELTVKNRDDLKLTMYAPAFTTHGISMNQRLLILSLVKVIKNVGPATEGLHDIIALAPSSGAVAPPGYYLLY 580 (596)
Q Consensus 501 ~~~v~~~~~~~~~~~~~~~~v~lv~~~~~THs~n~~QR~v~L~~~~~~~~~~~~~~g~~~~~v~~P~~~~v~pPG~ymLF 580 (596)
+|+|+++. .+.+|+|||++|+||++||+||+|+|+++.. |..+++|++|+|++||||||||||
T Consensus 576 ~~~~~~~~--------~~~~~~l~~~~~~th~~~~~qr~~~l~~~~~---------~~~~~~~~~p~~~~~~ppg~y~lf 638 (656)
T 1k3i_A 576 RITISTDS--------SISKASLIRYGTATHTVNTDQRRIPLTLTNN---------GGNSYSFQVPSDSGVALPGYWMLF 638 (656)
T ss_dssp EEEEEESS--------CCSEEEEEECCEEETTBCSSCCEEECCEEEE---------ETTEEEEECCSCTTTSCSEEEEEE
T ss_pred EEEEEEec--------cceEEEEEecCccccCcCCCCcEEecceEec---------CCCEEEEECCCCCCcCCCcCeEEE
Confidence 99998763 3578999999999999999999999999863 235789999999999999999999
Q ss_pred EEc-CCcCCccEEEEeC
Q 035640 581 VVY-KGVPSVAMWVQIK 596 (596)
Q Consensus 581 v~~-~gvPS~a~~v~i~ 596 (596)
||+ +||||+|+||+|+
T Consensus 639 ~~~~~g~ps~~~~v~~~ 655 (656)
T 1k3i_A 639 VMNSAGVPSVASTIRVT 655 (656)
T ss_dssp EECTTSCBCCCEEEEEE
T ss_pred EECCCCcccccEEEEEe
Confidence 996 9999999999984
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=286.70 Aligned_cols=271 Identities=15% Similarity=0.172 Sum_probs=212.5
Q ss_pred CCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcC
Q 035640 81 KINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGG 160 (596)
Q Consensus 81 ~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG 160 (596)
.+++||++||.+.. . .....+||+.+++|+.+..+...++..+++..+++||++||
T Consensus 14 ~~~~i~v~GG~~~~----~--------------------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 69 (302)
T 2xn4_A 14 LPKLMVVVGGQAPK----A--------------------IRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGG 69 (302)
T ss_dssp -CEEEEEECCBSSS----B--------------------CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESC
T ss_pred CCCEEEEECCCCCC----C--------------------CCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeC
Confidence 47899999986411 0 12478999999999999888777777677777999999999
Q ss_pred CCC--CCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCC----CcEEEe-CCCCCCCCCcccccCc
Q 035640 161 FGG--GANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPEGQSNKSPVFFPLL 233 (596)
Q Consensus 161 ~~~--g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~----~~~E~y-P~~~~w~~~~~~~p~l 233 (596)
... ..+++++|||. +++|+++++ |+.+|.+++++++ +++|||+||.+. .++|.| |.+++|.. ..++.
T Consensus 70 ~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~---~~~~p 143 (302)
T 2xn4_A 70 FNGSLRVRTVDSYDPV-KDQWTSVAN-MRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH---VAPMN 143 (302)
T ss_dssp BCSSSBCCCEEEEETT-TTEEEEECC-CSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEEEE---ECCCS
T ss_pred cCCCccccceEEECCC-CCceeeCCC-CCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeEee---cCCCC
Confidence 764 35789999999 999999985 9999999999988 999999999764 357889 99998852 11221
Q ss_pred ccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc---------eeEEecCCCCeEEEeeccccCCCCCCCCCce
Q 035640 234 KDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN---------RSILLDPKANKVVREFPILTGGSRNYPASAM 304 (596)
Q Consensus 234 ~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~---------~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~ 304 (596)
.. .+.+..++.+++||++||. +.++||+.+++|. .+++||. +|.. .+
T Consensus 144 ~~-------------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~ 199 (302)
T 2xn4_A 144 TR-------------------RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST-RRSG---AG 199 (302)
T ss_dssp SC-------------------CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS-CCBS---CE
T ss_pred Cc-------------------ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc-cccc---cc
Confidence 11 1335666789999999984 3789999999997 6888884 5642 23
Q ss_pred EEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCC
Q 035640 305 SVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTE 383 (596)
Q Consensus 305 av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG 383 (596)
++. .+++||++||.+. . ..++.+++||+. +++|+.. +|+.+|..+.+ ++.+|
T Consensus 200 ~~~------------~~~~iyv~GG~~~-~-----------~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~-~~~~~ 252 (302)
T 2xn4_A 200 VGV------------LNNLLYAVGGHDG-P-----------LVRKSVEVYDPT--TNAWRQVADMNMCRRNAGV-CAVNG 252 (302)
T ss_dssp EEE------------ETTEEEEECCBSS-S-----------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEE-EEETT
T ss_pred EEE------------ECCEEEEECCCCC-C-----------cccceEEEEeCC--CCCEeeCCCCCCccccCeE-EEECC
Confidence 332 4899999999752 1 235789999987 8999999 99999999974 45599
Q ss_pred eEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEec-CCCcccccceEEEEcCCCcE
Q 035640 384 DILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELA-AGTIPRMYHSSSVLLPDGTV 445 (596)
Q Consensus 384 ~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a-~~~~~R~yhs~a~LlpDG~V 445 (596)
+|||+||.+. .....++++|||+++ +|+.++ +|+.+|.+|+++++ +++|
T Consensus 253 ~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 253 LLYVVGGDDG--------SCNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp EEEEECCBCS--------SSBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred EEEEECCcCC--------CcccccEEEEcCCCC---eEEECCcccCcccccceEEEe--cccC
Confidence 9999999752 223457899999999 999997 89999999999988 6654
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5.4e-33 Score=286.66 Aligned_cols=274 Identities=16% Similarity=0.132 Sum_probs=213.3
Q ss_pred ceeeeeccCCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCEEeCcCCCccccccCeecCC
Q 035640 73 AMHAILLPKINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSELTALKLQTDTWCSSGGLTAD 152 (596)
Q Consensus 73 a~~~~ll~~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~d 152 (596)
.-|.++. -+++||++||.+ +. ......+||+.+++|+.++.+...++...++..+
T Consensus 16 ~~~~~~~-~~~~i~v~GG~~-~~-----------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 70 (308)
T 1zgk_A 16 RGSHAPK-VGRLIYTAGGYF-RQ-----------------------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVG 70 (308)
T ss_dssp -----CC-CCCCEEEECCBS-SS-----------------------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred CCccccC-CCCEEEEEeCcC-CC-----------------------CcceEEEEcCCCCeEeECCCCCcccccceEEEEC
Confidence 3466665 799999999862 11 0234789999999999998887777766777779
Q ss_pred CcEEEEcCC----CC--CCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCC----CcEEEe-CCCC
Q 035640 153 GDLVSTGGF----GG--GANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPEG 221 (596)
Q Consensus 153 G~ilv~GG~----~~--g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~----~~~E~y-P~~~ 221 (596)
++||++||. .. ..+.+++|||. +++|+++++ |+.+|.+++++++ +|+|||+||... ..+|+| |.++
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPM-TNQWSPCAP-MSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETT-TTEEEECCC-CSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCC-CCeEeECCC-CCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 999999997 32 25789999999 999999985 9999999999988 999999999754 468899 9999
Q ss_pred CCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc-------eeEEecCCCCeEEEeeccccC
Q 035640 222 QSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-------RSILLDPKANKVVREFPILTG 294 (596)
Q Consensus 222 ~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-------~~e~yDp~t~~w~~~lp~mp~ 294 (596)
+|... .++... .+.+..++.+++||++||. +.++||+.+++|. .+++||.
T Consensus 148 ~W~~~---~~~p~~-------------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~ 204 (308)
T 1zgk_A 148 EWHLV---APMLTR-------------------RIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT 204 (308)
T ss_dssp EEEEC---CCCSSC-------------------CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS
T ss_pred eEeEC---CCCCcc-------------------ccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC
Confidence 88521 122111 1335566679999999984 4799999999997 7888885
Q ss_pred CCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCcc
Q 035640 295 GSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRV 373 (596)
Q Consensus 295 ~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~ 373 (596)
+|.. .+++. .+++||++||.+. . ..++++++||+. +++|+.. +|+.+|.
T Consensus 205 -~r~~---~~~~~------------~~~~iyv~GG~~~-~-----------~~~~~v~~yd~~--~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 205 -IRSG---AGVCV------------LHNCIYAAGGYDG-Q-----------DQLNSVERYDVE--TETWTFVAPMKHRRS 254 (308)
T ss_dssp -CCBS---CEEEE------------ETTEEEEECCBCS-S-----------SBCCCEEEEETT--TTEEEECCCCSSCCB
T ss_pred -cccc---ceEEE------------ECCEEEEEeCCCC-C-----------CccceEEEEeCC--CCcEEECCCCCCCcc
Confidence 5642 23332 4899999999762 1 136789999987 8999999 9999999
Q ss_pred ccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEE
Q 035640 374 MGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVL 439 (596)
Q Consensus 374 ~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~L 439 (596)
.+++++ .+++|||+||.+. .....++++|||+++ +|+.+++|+.+|.+|++++|
T Consensus 255 ~~~~~~-~~~~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 255 ALGITV-HQGRIYVLGGYDG--------HTFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp SCEEEE-ETTEEEEECCBCS--------SCBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEEC
T ss_pred ceEEEE-ECCEEEEEcCcCC--------CcccceEEEEcCCCC---EEeecCCCCCCcccceeEeC
Confidence 997554 5999999999752 223457899999999 99999999999999998864
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=5.4e-32 Score=278.14 Aligned_cols=252 Identities=13% Similarity=0.138 Sum_probs=203.3
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCC-CCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGG-GANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDG 201 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~-g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG 201 (596)
..+|||.+++|+.++.+...++..+++..+++||++||... ..+.+++|||. +++|+.+++ |+.+|..++++++ ++
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~ 102 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVV-KDSWYSKLG-PPTPRDSLAACAA-EG 102 (306)
T ss_dssp EEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETT-TTEEEEEEC-CSSCCBSCEEEEE-TT
T ss_pred EEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCC-CCeEEECCC-CCccccceeEEEE-CC
Confidence 67999999999999988888888788888999999999762 35789999999 999999975 9999999999988 99
Q ss_pred cEEEEcCCC-C----CcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--
Q 035640 202 GFIVVGGRG-A----FSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-- 273 (596)
Q Consensus 202 ~VyViGG~~-~----~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-- 273 (596)
+|||+||.+ . ..+++| |.+++|.. ++.+.. ..+.+..+..+++||++||.
T Consensus 103 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~----~~~~p~------------------~r~~~~~~~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 103 KIYTSGGSEVGNSALYLFECYDTRTESWHT----KPSMLT------------------QRCSHGMVEANGLIYVCGGSLG 160 (306)
T ss_dssp EEEEECCBBTTBSCCCCEEEEETTTTEEEE----ECCCSS------------------CCBSCEEEEETTEEEEECCEES
T ss_pred EEEEECCCCCCCcEeeeEEEEeCCCCceEe----CCCCcC------------------CcceeEEEEECCEEEEECCCCC
Confidence 999999975 2 468899 99998852 221111 11335566779999999983
Q ss_pred ---------eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccc
Q 035640 274 ---------RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQF 344 (596)
Q Consensus 274 ---------~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~ 344 (596)
++++||+.+++|. .+++||. +|.. .+++. .+++||++||.+..
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~i~v~GG~~~~----------- 212 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWT-ELCPMIE-ARKN---HGLVF------------VKDKIFAVGGQNGL----------- 212 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE------------ETTEEEEECCEETT-----------
T ss_pred CCCcccccceEEEeCCCCCeEE-ECCCccc-hhhc---ceEEE------------ECCEEEEEeCCCCC-----------
Confidence 3789999999997 7899885 5642 23332 48999999997521
Q ss_pred cCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEE
Q 035640 345 FPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKE 423 (596)
Q Consensus 345 ~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~ 423 (596)
..++.+++||+. +++|+.. +|+.+|..+.++++ +++|||+||.+. ......+++|||+++ +|+.
T Consensus 213 -~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~--------~~~~~~~~~yd~~~~---~W~~ 277 (306)
T 3ii7_A 213 -GGLDNVEYYDIK--LNEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGFQG--------VGRLGHILEYNTETD---KWVA 277 (306)
T ss_dssp -EEBCCEEEEETT--TTEEEECCCCSCCBSCCEEEEE-TTEEEEEECBCS--------SSBCCEEEEEETTTT---EEEE
T ss_pred -CCCceEEEeeCC--CCcEEECCCCCCCccceeEEEE-CCEEEEEeCcCC--------CeeeeeEEEEcCCCC---eEEe
Confidence 135788999987 8999999 99999999975555 999999999752 123447899999999 9999
Q ss_pred ecCCCcccccceEEEEcCC
Q 035640 424 LAAGTIPRMYHSSSVLLPD 442 (596)
Q Consensus 424 ~a~~~~~R~yhs~a~LlpD 442 (596)
+++|+.+|.+|+++++..+
T Consensus 278 ~~~~~~~r~~~~~~~~~~~ 296 (306)
T 3ii7_A 278 NSKVRAFPVTSCLICVVDT 296 (306)
T ss_dssp EEEEECCSCTTCEEEEEEC
T ss_pred CCCcccccceeEEEEECCc
Confidence 9999999999999988543
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=274.75 Aligned_cols=269 Identities=16% Similarity=0.158 Sum_probs=211.8
Q ss_pred CCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcC
Q 035640 81 KINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGG 160 (596)
Q Consensus 81 ~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG 160 (596)
.+++||++||...+.. ......+||+.+++|+.++.+...++..+++..+++||++||
T Consensus 13 ~~~~i~~~GG~~~~~~----------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG 70 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQS----------------------PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGG 70 (301)
T ss_dssp CCEEEEEECCEETTTE----------------------ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCEEEEEeCccCCCc----------------------ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcC
Confidence 3789999999431110 123478999999999999887777777777788999999999
Q ss_pred CCC--CCCeEEEEeCCCCCc---eeecCcCCCCcccccEEEEccCCcEEEEcCCCC----CcEEEe-CCCCCCCCCcccc
Q 035640 161 FGG--GANTVRYLSTCDGCD---WREYPTALADPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPEGQSNKSPVFF 230 (596)
Q Consensus 161 ~~~--g~~~v~~fdP~~t~~---W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~----~~~E~y-P~~~~w~~~~~~~ 230 (596)
... ..+++++||+. +++ |+.+++ |+.+|.+++++++ +++|||+||... ..+++| +.+++|.. ..
T Consensus 71 ~~~~~~~~~~~~~d~~-~~~~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~---~~ 144 (301)
T 2vpj_A 71 YDGRSRLSSVECLDYT-ADEDGVWYSVAP-MNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM---LG 144 (301)
T ss_dssp BCSSCBCCCEEEEETT-CCTTCCCEEECC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEE---EE
T ss_pred CCCCccCceEEEEECC-CCCCCeeEECCC-CCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEE---CC
Confidence 763 25789999999 899 999975 9999999999888 999999999764 468899 99998852 11
Q ss_pred cCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc-------eeEEecCCCCeEEEeeccccCCCCCCCCCc
Q 035640 231 PLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-------RSILLDPKANKVVREFPILTGGSRNYPASA 303 (596)
Q Consensus 231 p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-------~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g 303 (596)
++... .+.+..++.+++||++||. ++++||+.+++|. .+++||. +|.. .
T Consensus 145 ~~p~~-------------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~ 200 (301)
T 2vpj_A 145 DMQTA-------------------REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT-KRSG---A 200 (301)
T ss_dssp ECSSC-------------------CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS-CCBS---C
T ss_pred CCCCC-------------------cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc-cccc---c
Confidence 22111 1335566679999999984 4789999999997 6888885 5542 2
Q ss_pred eEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCC
Q 035640 304 MSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPT 382 (596)
Q Consensus 304 ~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpd 382 (596)
+++. .+++||++||.+. . ..++++++||+. +++|+.. +|+.+|..+.+++ .+
T Consensus 201 ~~~~------------~~~~i~v~GG~~~-~-----------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~ 253 (301)
T 2vpj_A 201 GVAL------------LNDHIYVVGGFDG-T-----------AHLSSVEAYNIR--TDSWTTVTSMTTPRCYVGATV-LR 253 (301)
T ss_dssp EEEE------------ETTEEEEECCBCS-S-----------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEE-ET
T ss_pred eEEE------------ECCEEEEEeCCCC-C-----------cccceEEEEeCC--CCcEEECCCCCCcccceeEEE-EC
Confidence 3332 4899999999762 1 126788999987 8999999 9999999997554 59
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEE
Q 035640 383 EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVL 439 (596)
Q Consensus 383 G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~L 439 (596)
|+|||+||.+. ......+++|||+++ +|+.+.+|+.+|.+|+++++
T Consensus 254 ~~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 254 GRLYAIAGYDG--------NSLLSSIECYDPIID---SWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp TEEEEECCBCS--------SSBEEEEEEEETTTT---EEEEEEEEEEEEESCEEEEE
T ss_pred CEEEEEcCcCC--------CcccccEEEEcCCCC---eEEEcCCCCcccccceEEEe
Confidence 99999999752 223457899999999 99999999999999998876
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.98 E-value=1.3e-30 Score=268.88 Aligned_cols=256 Identities=14% Similarity=0.123 Sum_probs=198.2
Q ss_pred ccccCeecCCCcEEEEcCCC-CCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCC----CC----Cc
Q 035640 143 WCSSGGLTADGDLVSTGGFG-GGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGR----GA----FS 213 (596)
Q Consensus 143 fc~~~~~l~dG~ilv~GG~~-~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~----~~----~~ 213 (596)
++...++..+++||++||.. ...+++++|||. +++|+++++ |+.+|.+++++++ +++||++||. .. ..
T Consensus 15 ~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 91 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS-NGTWLRLAD-LQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSA 91 (308)
T ss_dssp ------CCCCCCEEEECCBSSSBCCCEEEEETT-TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCC
T ss_pred eCCccccCCCCEEEEEeCcCCCCcceEEEEcCC-CCeEeECCC-CCcccccceEEEE-CCEEEEECCCcCCCCCCeecce
Confidence 44555667799999999973 236789999999 999999975 9999999998888 9999999997 32 46
Q ss_pred EEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc-------eeEEecCCCCeE
Q 035640 214 YEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-------RSILLDPKANKV 285 (596)
Q Consensus 214 ~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-------~~e~yDp~t~~w 285 (596)
+++| |.+++|.. ++.+... .+.+..++.+|+||++||. ++++||+.+++|
T Consensus 92 ~~~~d~~~~~W~~----~~~~p~~------------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 92 LDCYNPMTNQWSP----CAPMSVP------------------RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp EEEEETTTTEEEE----CCCCSSC------------------CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred EEEECCCCCeEeE----CCCCCcC------------------ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 7889 99988852 2211110 1235566679999999993 579999999999
Q ss_pred EEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEe
Q 035640 286 VREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKK 365 (596)
Q Consensus 286 ~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~ 365 (596)
. .+++||. +|.. .++++ .+++||++||.+. . ..++++++||+. +++|+.
T Consensus 150 ~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~-~-----------~~~~~~~~yd~~--~~~W~~ 198 (308)
T 1zgk_A 150 H-LVAPMLT-RRIG---VGVAV------------LNRLLYAVGGFDG-T-----------NRLNSAECYYPE--RNEWRM 198 (308)
T ss_dssp E-ECCCCSS-CCBS---CEEEE------------ETTEEEEECCBCS-S-----------CBCCCEEEEETT--TTEEEE
T ss_pred e-ECCCCCc-cccc---eEEEE------------ECCEEEEEeCCCC-C-----------CcCceEEEEeCC--CCeEee
Confidence 7 7899885 5642 23332 4899999999762 1 126789999987 899999
Q ss_pred e-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCc
Q 035640 366 E-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGT 444 (596)
Q Consensus 366 ~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~ 444 (596)
. +|+.+|..+++++ .+++|||+||... ......+++|||+++ +|+.+.+++.+|.+|+++++ +++
T Consensus 199 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~ 264 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCV-LHNCIYAAGGYDG--------QDQLNSVERYDVETE---TWTFVAPMKHRRSALGITVH--QGR 264 (308)
T ss_dssp CCCCSSCCBSCEEEE-ETTEEEEECCBCS--------SSBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTE
T ss_pred CCCCCCccccceEEE-ECCEEEEEeCCCC--------CCccceEEEEeCCCC---cEEECCCCCCCccceEEEEE--CCE
Confidence 9 9999999997555 4999999999852 122457899999999 99999999999999999988 999
Q ss_pred EEEecCCCCCccccCCCCCCcceEEEEcCCCC
Q 035640 445 VLVAGSNTHNGYILDAKYPTELRVEKFSPPYL 476 (596)
Q Consensus 445 Vlv~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl 476 (596)
||+.||...... ..++|+|+|..-
T Consensus 265 i~v~GG~~~~~~--------~~~v~~yd~~~~ 288 (308)
T 1zgk_A 265 IYVLGGYDGHTF--------LDSVECYDPDTD 288 (308)
T ss_dssp EEEECCBCSSCB--------CCEEEEEETTTT
T ss_pred EEEEcCcCCCcc--------cceEEEEcCCCC
Confidence 999999654321 348999999764
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.97 E-value=2.2e-30 Score=265.58 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=196.5
Q ss_pred CCCcEEEEcCCCC-CCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCC----CcEEEe-CCCCCCC
Q 035640 151 ADGDLVSTGGFGG-GANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPEGQSN 224 (596)
Q Consensus 151 ~dG~ilv~GG~~~-g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~----~~~E~y-P~~~~w~ 224 (596)
.+++||++||... ..+++++||+. +++|..++. |+.+|.+++++++ +++|||+||.+. ..+++| |.+++|.
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFK-EERWHQVAE-LPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETT-TTEEEEECC-CSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCc-CCcEeEccc-CCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCcee
Confidence 4789999999753 35789999999 999999975 9999999998888 999999999764 467889 9998885
Q ss_pred CCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc-------eeEEecCCCCeEEEeeccccCCCC
Q 035640 225 KSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-------RSILLDPKANKVVREFPILTGGSR 297 (596)
Q Consensus 225 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-------~~e~yDp~t~~w~~~lp~mp~~~R 297 (596)
. ++.+... .+.+..++.+|+||++||. ++++||+.+++|. .+++||. +|
T Consensus 91 ~----~~~~p~~------------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r 146 (302)
T 2xn4_A 91 S----VANMRDR------------------RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT-RR 146 (302)
T ss_dssp E----ECCCSSC------------------CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS-CC
T ss_pred e----CCCCCcc------------------ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC-cc
Confidence 2 2211111 1335667789999999983 5899999999997 7899985 56
Q ss_pred CCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccc
Q 035640 298 NYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGD 376 (596)
Q Consensus 298 ~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~ 376 (596)
.. .+++. .+++||++||.+... ...++++++||+. +++|+.. +|+.+|..|+
T Consensus 147 ~~---~~~~~------------~~~~iyv~GG~~~~~----------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~ 199 (302)
T 2xn4_A 147 SS---VGVGV------------VGGLLYAVGGYDVAS----------RQCLSTVECYNAT--TNEWTYIAEMSTRRSGAG 199 (302)
T ss_dssp BS---CEEEE------------ETTEEEEECCEETTT----------TEECCCEEEEETT--TTEEEEECCCSSCCBSCE
T ss_pred cC---ceEEE------------ECCEEEEEeCCCCCC----------CccccEEEEEeCC--CCcEEECCCCcccccccc
Confidence 43 22332 489999999975211 0236789999987 8999999 9999999997
Q ss_pred eEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCCCcc
Q 035640 377 MVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTHNGY 456 (596)
Q Consensus 377 avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~~~~ 456 (596)
++ +.+++|||+||.+. ......+++|||+++ +|+.+++|+.+|..|+++++ +++||+.||......
T Consensus 200 ~~-~~~~~iyv~GG~~~--------~~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~ 265 (302)
T 2xn4_A 200 VG-VLNNLLYAVGGHDG--------PLVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCN 265 (302)
T ss_dssp EE-EETTEEEEECCBSS--------SSBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSB
T ss_pred EE-EECCEEEEECCCCC--------CcccceEEEEeCCCC---CEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcc
Confidence 54 55999999999752 122347899999999 99999999999999998887 999999999654321
Q ss_pred ccCCCCCCcceEEEEcCCCC
Q 035640 457 ILDAKYPTELRVEKFSPPYL 476 (596)
Q Consensus 457 ~~~~~~p~~~~vE~y~Ppyl 476 (596)
..++|+|+|..-
T Consensus 266 --------~~~v~~yd~~~~ 277 (302)
T 2xn4_A 266 --------LASVEYYNPTTD 277 (302)
T ss_dssp --------CCCEEEEETTTT
T ss_pred --------cccEEEEcCCCC
Confidence 247999999874
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.97 E-value=2.6e-30 Score=265.61 Aligned_cols=250 Identities=13% Similarity=0.121 Sum_probs=197.1
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCC---CcEEEe-CCCCCCCCCc
Q 035640 152 DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGA---FSYEYI-PPEGQSNKSP 227 (596)
Q Consensus 152 dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~---~~~E~y-P~~~~w~~~~ 227 (596)
.+.||++||... .+++++|||. +++|+.++. |+.+|.+++++++ +++|||+||.+. ..+++| |.+++|..
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~-- 84 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK-DYSWTDIRC-PFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSWYS-- 84 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT-TTEEEECCC-CSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEEEE--
T ss_pred cceEEEEeCCCC-CceEEEecCC-CCCEecCCC-CCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeEEE--
Confidence 478999999865 7889999999 999999985 9999999999988 999999999762 467889 99998852
Q ss_pred ccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--------eEEecCCCCeEEEeeccccCCCCCC
Q 035640 228 VFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--------SILLDPKANKVVREFPILTGGSRNY 299 (596)
Q Consensus 228 ~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--------~e~yDp~t~~w~~~lp~mp~~~R~~ 299 (596)
++.+.. ..+.+..++.+++||++||.+ +++||+.+++|. .+++||. +|..
T Consensus 85 --~~~~p~------------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~ 142 (306)
T 3ii7_A 85 --KLGPPT------------------PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT-QRCS 142 (306)
T ss_dssp --EECCSS------------------CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS-CCBS
T ss_pred --CCCCCc------------------cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC-Ccce
Confidence 221111 113356667799999999953 789999999997 7899985 5642
Q ss_pred CCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceE
Q 035640 300 PASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMV 378 (596)
Q Consensus 300 p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~av 378 (596)
.+++. .+++||++||...... ....++++++||+. +++|+.. +|+.+|..|.++
T Consensus 143 ---~~~~~------------~~~~iyv~GG~~~~~~--------~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~ 197 (306)
T 3ii7_A 143 ---HGMVE------------ANGLIYVCGGSLGNNV--------SGRVLNSCEVYDPA--TETWTELCPMIEARKNHGLV 197 (306)
T ss_dssp ---CEEEE------------ETTEEEEECCEESCTT--------TCEECCCEEEEETT--TTEEEEECCCSSCCBSCEEE
T ss_pred ---eEEEE------------ECCEEEEECCCCCCCC--------cccccceEEEeCCC--CCeEEECCCccchhhcceEE
Confidence 23332 4899999999752110 00126789999998 8999999 999999999755
Q ss_pred EeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCCCcccc
Q 035640 379 ILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTHNGYIL 458 (596)
Q Consensus 379 vLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~~~~~~ 458 (596)
++ +++|||+||.+. ......+++|||+++ +|+.+++++.+|..|+++++ +++||++||.....+
T Consensus 198 ~~-~~~i~v~GG~~~--------~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~-- 261 (306)
T 3ii7_A 198 FV-KDKIFAVGGQNG--------LGGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGR-- 261 (306)
T ss_dssp EE-TTEEEEECCEET--------TEEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSB--
T ss_pred EE-CCEEEEEeCCCC--------CCCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCee--
Confidence 54 999999999752 123457899999999 99999999999999999988 999999999754322
Q ss_pred CCCCCCcceEEEEcCCCC
Q 035640 459 DAKYPTELRVEKFSPPYL 476 (596)
Q Consensus 459 ~~~~p~~~~vE~y~Ppyl 476 (596)
..++++|+|..-
T Consensus 262 ------~~~~~~yd~~~~ 273 (306)
T 3ii7_A 262 ------LGHILEYNTETD 273 (306)
T ss_dssp ------CCEEEEEETTTT
T ss_pred ------eeeEEEEcCCCC
Confidence 348999999874
No 9
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.97 E-value=9.2e-31 Score=270.93 Aligned_cols=263 Identities=16% Similarity=0.190 Sum_probs=198.3
Q ss_pred EEEEeCCCCCEEeCcCC-CccccccCeecCCCcEEEEcCCC---CC-----CCeEEEEeCCCCCceeecCcCCCCccccc
Q 035640 123 SVLFDFETSELTALKLQ-TDTWCSSGGLTADGDLVSTGGFG---GG-----ANTVRYLSTCDGCDWREYPTALADPRWYS 193 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~-~~~fc~~~~~l~dG~ilv~GG~~---~g-----~~~v~~fdP~~t~~W~~~~~~M~~~R~y~ 193 (596)
..+|||.+++|...+.. ...++..+++..+++||++||.. ++ .+.+++|||. +++|.++++ |+.+|.++
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~ 103 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV-SSEWVGLPP-LPSARCLF 103 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT-TTEEEECSC-BSSCBCSC
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC-CCcEEECCC-CCcccccc
Confidence 57899999999985432 24466666778899999999953 11 2348999999 999999975 99999999
Q ss_pred EEEEccCCcEEEEcCCCC------CcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCc
Q 035640 194 TQVTLPDGGFIVVGGRGA------FSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGN 266 (596)
Q Consensus 194 s~~~L~dG~VyViGG~~~------~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~ 266 (596)
+++++ +++|||+||... ..+++| +.+++|.. ..++... .+.+..++.+|+
T Consensus 104 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~-------------------r~~~~~~~~~~~ 160 (318)
T 2woz_A 104 GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE---VKNLPIK-------------------VYGHNVISHNGM 160 (318)
T ss_dssp EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE---ECCCSSC-------------------EESCEEEEETTE
T ss_pred ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeE---CCCCCCc-------------------ccccEEEEECCE
Confidence 99888 999999999742 357889 99998852 1122111 133566678999
Q ss_pred EEEEecc--------eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccc
Q 035640 267 LFIFSNN--------RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFS 338 (596)
Q Consensus 267 Ifv~Gg~--------~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 338 (596)
||++||. ++++||+.+++|. .+++||. +|.. .+++. .+++||++||.....
T Consensus 161 iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~~---- 219 (318)
T 2woz_A 161 IYCLGGKTDDKKCTNRVFIYNPKKGDWK-DLAPMKT-PRSM---FGVAI------------HKGKIVIAGGVTEDG---- 219 (318)
T ss_dssp EEEECCEESSSCBCCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE------------ETTEEEEEEEEETTE----
T ss_pred EEEEcCCCCCCCccceEEEEcCCCCEEE-ECCCCCC-Cccc---ceEEE------------ECCEEEEEcCcCCCC----
Confidence 9999984 3799999999997 7899884 5643 22332 489999999975211
Q ss_pred cccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCC-CCCCCcccEEEcCCCC
Q 035640 339 ETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWND-AEDPNLVPALYTPRGP 416 (596)
Q Consensus 339 ~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~-~~~~~~s~e~YDP~t~ 416 (596)
.++++++||+. +++|+.. +||.+|..|.+ +..+++|||+||.......-+. .......+++|||+++
T Consensus 220 --------~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 220 --------LSASVEAFDLK--TNKWEVMTEFPQERSSISL-VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp --------EEEEEEEEETT--TCCEEECCCCSSCCBSCEE-EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred --------ccceEEEEECC--CCeEEECCCCCCcccceEE-EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 24678899987 8999999 99999999975 4569999999997521000000 0122457899999999
Q ss_pred CCCceEEecCCCcccccceEEEEcCCCcEEEec
Q 035640 417 SRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAG 449 (596)
Q Consensus 417 ~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~G 449 (596)
+|+.+ ++.+|..|+++++ +++||+..
T Consensus 289 ---~W~~~--~~~~r~~~~~~~~--~~~iyi~~ 314 (318)
T 2woz_A 289 ---EWAGM--LKEIRYASGASCL--ATRLNLFK 314 (318)
T ss_dssp ---EEEEE--ESCCGGGTTCEEE--EEEEEGGG
T ss_pred ---Eehhh--cccccccccceee--CCEEEEEE
Confidence 99998 8899999999998 99999864
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=5.8e-31 Score=272.11 Aligned_cols=263 Identities=16% Similarity=0.153 Sum_probs=199.9
Q ss_pred EEEEeCCCCCEEeCcCC-CccccccCeecCCCcEEEEcCCC----C-C---CCeEEEEeCCCCCceeecCcCCCCccccc
Q 035640 123 SVLFDFETSELTALKLQ-TDTWCSSGGLTADGDLVSTGGFG----G-G---ANTVRYLSTCDGCDWREYPTALADPRWYS 193 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~-~~~fc~~~~~l~dG~ilv~GG~~----~-g---~~~v~~fdP~~t~~W~~~~~~M~~~R~y~ 193 (596)
..+|||.+++|+..... ...++..+++..+++||++||.. . . .+.+++|||. +++|+++++ |+.+|.++
T Consensus 15 ~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~ 92 (315)
T 4asc_A 15 AVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL-DSEWLGMPP-LPSPRCLF 92 (315)
T ss_dssp EEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT-TTEEEECCC-BSSCEESC
T ss_pred eEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC-CCeEEECCC-CCcchhce
Confidence 67899999999863222 23566666777899999999951 1 1 2458999999 999999975 99999999
Q ss_pred EEEEccCCcEEEEcCCC----C---CcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCC
Q 035640 194 TQVTLPDGGFIVVGGRG----A---FSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDG 265 (596)
Q Consensus 194 s~~~L~dG~VyViGG~~----~---~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG 265 (596)
+++++ +++|||+||.+ . ..+++| |.+++|... .++... .+.++.++.++
T Consensus 93 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~-------------------r~~~~~~~~~~ 149 (315)
T 4asc_A 93 GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES---DPLPYV-------------------VYGHTVLSHMD 149 (315)
T ss_dssp EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC---CCCSSC-------------------CBSCEEEEETT
T ss_pred eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC---CCCCCc-------------------ccceeEEEECC
Confidence 99988 99999999953 1 468899 999888521 122111 13466677899
Q ss_pred cEEEEecc--------eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCcccc
Q 035640 266 NLFIFSNN--------RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYF 337 (596)
Q Consensus 266 ~Ifv~Gg~--------~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 337 (596)
+||++||. ++++||+.+++|. .+++||. +|.. .+++. .+++||++||.+..
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~---- 208 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKFEWK-ELAPMQT-ARSL---FGATV------------HDGRIIVAAGVTDT---- 208 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTTEEE-ECCCCSS-CCBS---CEEEE------------ETTEEEEEEEECSS----
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCCeEE-ECCCCCC-chhc---eEEEE------------ECCEEEEEeccCCC----
Confidence 99999996 4799999999997 7999985 5642 23332 48999999997521
Q ss_pred ccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCC---CCCcccEEEcC
Q 035640 338 SETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAE---DPNLVPALYTP 413 (596)
Q Consensus 338 ~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~---~~~~s~e~YDP 413 (596)
..++++++||+. +++|+.. +|+.+|..+.++ ..+|+|||+||.+... . .++. .....+++|||
T Consensus 209 --------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~-~-~~~~~~~~~~~~v~~yd~ 275 (315)
T 4asc_A 209 --------GLTSSAEVYSIT--DNKWAPFEAFPQERSSLSLV-SLVGTLYAIGGFATLE-T-ESGELVPTELNDIWRYNE 275 (315)
T ss_dssp --------SEEEEEEEEETT--TTEEEEECCCSSCCBSCEEE-EETTEEEEEEEEEEEE-C-TTSCEEEEEEEEEEEEET
T ss_pred --------CccceEEEEECC--CCeEEECCCCCCcccceeEE-EECCEEEEECCccccC-c-CCccccccccCcEEEecC
Confidence 135678999987 8999999 999999999755 4599999999974200 0 0000 12346899999
Q ss_pred CCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 414 RGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 414 ~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
+++ +|+.+ ++.+|..|+++++ ++++|+....
T Consensus 276 ~~~---~W~~~--~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 276 EEK---KWEGV--LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp TTT---EEEEE--ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred CCC---hhhhh--ccCCcCccceEEe--CCEEEEEEeh
Confidence 999 99999 7788999999998 9999998653
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=2.6e-29 Score=257.32 Aligned_cols=248 Identities=17% Similarity=0.211 Sum_probs=195.4
Q ss_pred CCCcEEEEcC-CCC--CCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCC----CcEEEe-CCCCC
Q 035640 151 ADGDLVSTGG-FGG--GANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGA----FSYEYI-PPEGQ 222 (596)
Q Consensus 151 ~dG~ilv~GG-~~~--g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~----~~~E~y-P~~~~ 222 (596)
.+++||++|| ... ..+++++|||. +++|..++. |+.+|.+++++.+ +++||++||... ..+++| +.+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK-TQEWSFLPS-ITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT-TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC-CCeEEeCCC-CChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 4789999999 432 25789999999 999999985 9999999998888 899999999763 467888 99888
Q ss_pred ---CCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc-------eeEEecCCCCeEEEeeccc
Q 035640 223 ---SNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-------RSILLDPKANKVVREFPIL 292 (596)
Q Consensus 223 ---w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-------~~e~yDp~t~~w~~~lp~m 292 (596)
|.. ++.+... .+.+..+..+++||++||. ++++||+.+++|. .+++|
T Consensus 90 ~~~W~~----~~~~p~~------------------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~ 146 (301)
T 2vpj_A 90 DGVWYS----VAPMNVR------------------RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDM 146 (301)
T ss_dssp TCCCEE----ECCCSSC------------------CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEEC
T ss_pred CCeeEE----CCCCCCC------------------ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCC
Confidence 852 2211111 1335566679999999984 5799999999997 68888
Q ss_pred cCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCC
Q 035640 293 TGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSP 371 (596)
Q Consensus 293 p~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~ 371 (596)
|. +|.. .+++. .+++||++||.+. . ..++.+++||+. +++|+.. +|+.+
T Consensus 147 p~-~r~~---~~~~~------------~~~~iyv~GG~~~-~-----------~~~~~~~~~d~~--~~~W~~~~~~p~~ 196 (301)
T 2vpj_A 147 QT-AREG---AGLVV------------ASGVIYCLGGYDG-L-----------NILNSVEKYDPH--TGHWTNVTPMATK 196 (301)
T ss_dssp SS-CCBS---CEEEE------------ETTEEEEECCBCS-S-----------CBCCCEEEEETT--TTEEEEECCCSSC
T ss_pred CC-Cccc---ceEEE------------ECCEEEEECCCCC-C-----------cccceEEEEeCC--CCcEEeCCCCCcc
Confidence 84 5642 23332 4899999999752 1 236789999987 8999999 99999
Q ss_pred ccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 372 RVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 372 R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
|..+.++ +.+++|||+||.+. .....++++|||+++ +|+.+++++.+|.+|+++++ +++||+.||.
T Consensus 197 r~~~~~~-~~~~~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 262 (301)
T 2vpj_A 197 RSGAGVA-LLNDHIYVVGGFDG--------TAHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL--RGRLYAIAGY 262 (301)
T ss_dssp CBSCEEE-EETTEEEEECCBCS--------SSBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred cccceEE-EECCEEEEEeCCCC--------CcccceEEEEeCCCC---cEEECCCCCCcccceeEEEE--CCEEEEEcCc
Confidence 9999754 55999999999752 112457899999999 99999999999999998888 9999999996
Q ss_pred CCCccccCCCCCCcceEEEEcCCCC
Q 035640 452 THNGYILDAKYPTELRVEKFSPPYL 476 (596)
Q Consensus 452 ~~~~~~~~~~~p~~~~vE~y~Ppyl 476 (596)
..... ..++|+|+|..-
T Consensus 263 ~~~~~--------~~~v~~yd~~~~ 279 (301)
T 2vpj_A 263 DGNSL--------LSSIECYDPIID 279 (301)
T ss_dssp CSSSB--------EEEEEEEETTTT
T ss_pred CCCcc--------cccEEEEcCCCC
Confidence 44321 358999998764
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=4.6e-29 Score=261.84 Aligned_cols=261 Identities=17% Similarity=0.182 Sum_probs=186.7
Q ss_pred CcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCC-CCceeecCcCCC-CcccccEEEEccCCcEEEEcCC-C--
Q 035640 136 LKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCD-GCDWREYPTALA-DPRWYSTQVTLPDGGFIVVGGR-G-- 210 (596)
Q Consensus 136 l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~-t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyViGG~-~-- 210 (596)
++.++..++.+.+++.+++|||+||... +++++||+.. +++|+.+++ |+ .+|.+++++++ +|+|||+||. +
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~-~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSAG--TAWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFI-DGNLYVFGGIGKNS 78 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGGT--TCEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEE-TTEEEEECCEEECT
T ss_pred CCCCCccccceEEEEECCEEEEEeCcCC--CeEEEEccccCCCCeeECCC-CCCCcCccceEEEE-CCEEEEEcCCCCCC
Confidence 4455566666666677999999999753 5799999962 489999986 99 89999999988 8999999998 2
Q ss_pred ------CCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEec-----------
Q 035640 211 ------AFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSN----------- 272 (596)
Q Consensus 211 ------~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg----------- 272 (596)
...+++| |.+++|.. ..++... ..+.+..++.+++||++||
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~---~~~~~p~------------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 137 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVK---LMSHAPM------------------GMAGHVTFVHNGKAYVTGGVNQNIFNGYFE 137 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEE---CSCCCSS------------------CCSSEEEEEETTEEEEEECCCHHHHHHHHH
T ss_pred CccceeeccEEEEeCCCCcEEE---CCCCCCc------------------ccccceEEEECCEEEEEeCcCCCcCccccc
Confidence 1468899 99998852 1111101 1133555668999999998
Q ss_pred ------------------------------ceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCC
Q 035640 273 ------------------------------NRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKA 322 (596)
Q Consensus 273 ------------------------------~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~g 322 (596)
+++++||+.+++|. .+++||...|. ..+++. .++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~~~~---~~~~~~------------~~~ 201 (357)
T 2uvk_A 138 DLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS-YAGESPWYGTA---GAAVVN------------KGD 201 (357)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE-EEEECSSCCCB---SCEEEE------------ETT
T ss_pred chhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEE-ECCCCCCCCcc---cccEEE------------ECC
Confidence 35789999999997 68888852332 123332 489
Q ss_pred EEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCcc--ccceEEeCCCeEEEEcCCCCCCC---
Q 035640 323 KVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRV--MGDMVILPTEDILLLNGAKTGTS--- 396 (596)
Q Consensus 323 kI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~--~~~avvLpdG~V~vvGG~~~g~~--- 396 (596)
+||++||..... ..++.+++||+...+++|+.. +|+.+|. .++ +++.+++|||+||......
T Consensus 202 ~iyv~GG~~~~~-----------~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~iyv~GG~~~~~~~~~ 269 (357)
T 2uvk_A 202 KTWLINGEAKPG-----------LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF-AGISNDSLIFAGGAGFKGSREN 269 (357)
T ss_dssp EEEEECCEEETT-----------EECCCEEEEECC---CEEEECCCSSTTTCCBSCE-EEEETTEEEEECCEECTTHHHH
T ss_pred EEEEEeeecCCC-----------cccCceEEEEecCCCCcEEecCCCCCCcccccce-EEEECCEEEEEcCccccCCccc
Confidence 999999975211 125667888873337899998 8877754 453 5566999999999742100
Q ss_pred ---C--C-CCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCCC
Q 035640 397 ---G--W-NDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTHN 454 (596)
Q Consensus 397 ---g--~-~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~~ 454 (596)
+ | ......+.++|+|||+++ +|+.+++|+.+|.+|+++++ +++|||+||....
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 270 YQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGELSQGRAYGVSLPW--NNSLLIIGGETAG 328 (357)
T ss_dssp HHTTCSSTTTTCCCEECCEEEECC------CEEEEECSSCCBSSEEEEE--TTEEEEEEEECGG
T ss_pred ccccceeccccccceeeEEEEecCCC---ceeeCCCCCCCcccceeEEe--CCEEEEEeeeCCC
Confidence 0 0 001223457899999999 99999999999999999887 9999999997543
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.96 E-value=3.2e-28 Score=251.48 Aligned_cols=249 Identities=14% Similarity=0.081 Sum_probs=186.6
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCC--CCcccccEEEEccCCcEEEEcCCC----C------CcEEEe-C
Q 035640 152 DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTAL--ADPRWYSTQVTLPDGGFIVVGGRG----A------FSYEYI-P 218 (596)
Q Consensus 152 dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M--~~~R~y~s~~~L~dG~VyViGG~~----~------~~~E~y-P 218 (596)
...|+++|| +.+.+|||. +++|.. ++ | +.+|.+++++++ +++||++||.. . ..++.| |
T Consensus 4 ~~~l~~~GG-----~~~~~yd~~-~~~W~~-~~-~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 4 QDLIFMISE-----EGAVAYDPA-ANECYC-AS-LSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEEEEEET-----TEEEEEETT-TTEEEE-EE-CCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred ceEEEEEcC-----CceEEECCC-CCeEec-CC-CCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecC
Confidence 346889998 569999999 999987 33 6 458999988877 99999999951 1 126778 9
Q ss_pred CCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc----------eeEEecCCCCeEEEe
Q 035640 219 PEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN----------RSILLDPKANKVVRE 288 (596)
Q Consensus 219 ~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~----------~~e~yDp~t~~w~~~ 288 (596)
.+++|.. ++.+... .+.+..++.+++||++||. ++++||+.+++|. .
T Consensus 75 ~~~~W~~----~~~~p~~------------------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~ 131 (315)
T 4asc_A 75 LDSEWLG----MPPLPSP------------------RCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-E 131 (315)
T ss_dssp TTTEEEE----CCCBSSC------------------EESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-E
T ss_pred CCCeEEE----CCCCCcc------------------hhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-E
Confidence 9988852 2211111 1235666779999999993 3799999999997 7
Q ss_pred eccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-c
Q 035640 289 FPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-R 367 (596)
Q Consensus 289 lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~ 367 (596)
+++||. +|.. .+++. .+++||++||...+. ..++++++||+. +++|+.. +
T Consensus 132 ~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~~-----------~~~~~~~~yd~~--~~~W~~~~~ 182 (315)
T 4asc_A 132 SDPLPY-VVYG---HTVLS------------HMDLVYVIGGKGSDR-----------KCLNKMCVYDPK--KFEWKELAP 182 (315)
T ss_dssp CCCCSS-CCBS---CEEEE------------ETTEEEEECCBCTTS-----------CBCCCEEEEETT--TTEEEECCC
T ss_pred CCCCCC-cccc---eeEEE------------ECCEEEEEeCCCCCC-----------cccceEEEEeCC--CCeEEECCC
Confidence 999985 5642 23332 489999999974221 346889999987 8999999 9
Q ss_pred CCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEE
Q 035640 368 MPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLV 447 (596)
Q Consensus 368 M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv 447 (596)
|+.+|..|++++ .+++|||+||... ......+++|||+++ +|+.+++++.+|..|+++++ +++||+
T Consensus 183 ~p~~r~~~~~~~-~~~~iyv~GG~~~--------~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~l~v 248 (315)
T 4asc_A 183 MQTARSLFGATV-HDGRIIVAAGVTD--------TGLTSSAEVYSITDN---KWAPFEAFPQERSSLSLVSL--VGTLYA 248 (315)
T ss_dssp CSSCCBSCEEEE-ETTEEEEEEEECS--------SSEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred CCCchhceEEEE-ECCEEEEEeccCC--------CCccceEEEEECCCC---eEEECCCCCCcccceeEEEE--CCEEEE
Confidence 999999997554 5999999999752 123457899999999 99999999999999999888 999999
Q ss_pred ecCCCCCccccCCCC--CCcceEEEEcCCCC
Q 035640 448 AGSNTHNGYILDAKY--PTELRVEKFSPPYL 476 (596)
Q Consensus 448 ~GG~~~~~~~~~~~~--p~~~~vE~y~Ppyl 476 (596)
.||....... ++.+ ....++|+|+|..-
T Consensus 249 ~GG~~~~~~~-~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 249 IGGFATLETE-SGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEEEEEETTTT
T ss_pred ECCccccCcC-CccccccccCcEEEecCCCC
Confidence 9996431000 0000 01347999999874
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.96 E-value=9.7e-28 Score=248.19 Aligned_cols=251 Identities=15% Similarity=0.113 Sum_probs=185.9
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCC----C------CcEEEe-CCC
Q 035640 152 DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRG----A------FSYEYI-PPE 220 (596)
Q Consensus 152 dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~----~------~~~E~y-P~~ 220 (596)
++.|+++||. .+++|||. +++|...+.+.+.+|.+++++++ +++||++||.. . ..++.| |.+
T Consensus 15 ~~~i~~~GG~-----~~~~yd~~-~~~W~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~ 87 (318)
T 2woz_A 15 KDLILLVNDT-----AAVAYDPM-ENECYLTALAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVS 87 (318)
T ss_dssp EEEEEEECSS-----EEEEEETT-TTEEEEEEECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEEETTT
T ss_pred cchhhhcccc-----ceEEECCC-CCceecccCCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEEeCCC
Confidence 5689999994 48999999 99998842112368988877766 99999999952 1 126788 999
Q ss_pred CCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc---------eeEEecCCCCeEEEeecc
Q 035640 221 GQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN---------RSILLDPKANKVVREFPI 291 (596)
Q Consensus 221 ~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~---------~~e~yDp~t~~w~~~lp~ 291 (596)
++|.. ++.+... .+.+..++.+++||++||. ++++||+.+++|. .+++
T Consensus 88 ~~W~~----~~~~p~~------------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~ 144 (318)
T 2woz_A 88 SEWVG----LPPLPSA------------------RCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKN 144 (318)
T ss_dssp TEEEE----CSCBSSC------------------BCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECC
T ss_pred CcEEE----CCCCCcc------------------ccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCC
Confidence 88852 2211110 1235667779999999984 3789999999997 7888
Q ss_pred ccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCC
Q 035640 292 LTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPS 370 (596)
Q Consensus 292 mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~ 370 (596)
||. +|.. .+++. .+++||++||...+. ..++++++||+. +++|+.. +|+.
T Consensus 145 ~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~~-----------~~~~~~~~yd~~--~~~W~~~~~~p~ 195 (318)
T 2woz_A 145 LPI-KVYG---HNVIS------------HNGMIYCLGGKTDDK-----------KCTNRVFIYNPK--KGDWKDLAPMKT 195 (318)
T ss_dssp CSS-CEES---CEEEE------------ETTEEEEECCEESSS-----------CBCCCEEEEETT--TTEEEEECCCSS
T ss_pred CCC-cccc---cEEEE------------ECCEEEEEcCCCCCC-----------CccceEEEEcCC--CCEEEECCCCCC
Confidence 885 5542 23332 489999999975211 246789999998 8999999 9999
Q ss_pred CccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecC
Q 035640 371 PRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGS 450 (596)
Q Consensus 371 ~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG 450 (596)
+|..|+++ +.+++|||+||... ......+|+|||+++ +|+.+++++.+|..|+++++ +++||+.||
T Consensus 196 ~r~~~~~~-~~~~~iyv~GG~~~--------~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 261 (318)
T 2woz_A 196 PRSMFGVA-IHKGKIVIAGGVTE--------DGLSASVEAFDLKTN---KWEVMTEFPQERSSISLVSL--AGSLYAIGG 261 (318)
T ss_dssp CCBSCEEE-EETTEEEEEEEEET--------TEEEEEEEEEETTTC---CEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred CcccceEE-EECCEEEEEcCcCC--------CCccceEEEEECCCC---eEEECCCCCCcccceEEEEE--CCEEEEECC
Confidence 99999755 45999999999752 122457899999999 99999999999999998888 999999999
Q ss_pred CCCCccccCCCC--CCcceEEEEcCCCC
Q 035640 451 NTHNGYILDAKY--PTELRVEKFSPPYL 476 (596)
Q Consensus 451 ~~~~~~~~~~~~--p~~~~vE~y~Ppyl 476 (596)
....... .+.. ....++++|+|...
T Consensus 262 ~~~~~~~-~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 262 FAMIQLE-SKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp BCCBC-----CCBCCBCCCEEEEETTTT
T ss_pred eeccCCC-CceeccceeeeEEEEeCCCC
Confidence 6542100 0000 01347999999874
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=3.4e-27 Score=268.70 Aligned_cols=293 Identities=13% Similarity=0.111 Sum_probs=201.0
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecC-CCcEEEEcCCCC--------CCCeEEEEeCCCCCceeecCcCCCCccccc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTA-DGDLVSTGGFGG--------GANTVRYLSTCDGCDWREYPTALADPRWYS 193 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~-dG~ilv~GG~~~--------g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~ 193 (596)
...|||.+++|+++..+... ..+.++++ +|+||++||... +...+++|||. +++|+.++. |+.+|..+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~-~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~-t~~w~~~~~-~~~~~~~~ 244 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV-PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS-TGIVSDRTV-TVTKHDMF 244 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC-CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT-TCCBCCCEE-EECSCCCS
T ss_pred cccCCCCCCeeeeeccCCCC-ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC-CCcEEeCcc-cCCCCCCc
Confidence 35679999999988766542 23344555 999999999642 23478999999 999999875 87776544
Q ss_pred --EEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEE
Q 035640 194 --TQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIF 270 (596)
Q Consensus 194 --s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~ 270 (596)
+++++.||+||++||....++++| |.+++|.. ++.+... ..|+.+.+++||+||++
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~----~~~~~~~-----------------R~~~s~~~~~dg~iyv~ 303 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIP----GPDMQVA-----------------RGYQSSATMSDGRVFTI 303 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEE----CCCCSSC-----------------CSSCEEEECTTSCEEEE
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeE----CCCCCcc-----------------ccccceEEecCCeEEEE
Confidence 467777999999999877789999 99998852 2212111 13555566669999999
Q ss_pred ec--------ceeEEecCCCCeEEEee-----ccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCcccc
Q 035640 271 SN--------NRSILLDPKANKVVREF-----PILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYF 337 (596)
Q Consensus 271 Gg--------~~~e~yDp~t~~w~~~l-----p~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 337 (596)
|| .++|+||+.+++|. .+ ++|+. .|. .+ ++ ..+++||++||.+ +...
T Consensus 304 GG~~~~~~~~~~~e~yd~~t~~W~-~~~~~~~~p~~~-~~~---~~-~~------------~~~~~iyv~Gg~~-g~~~- 363 (656)
T 1k3i_A 304 GGSWSGGVFEKNGEVYSPSSKTWT-SLPNAKVNPMLT-ADK---QG-LY------------RSDNHAWLFGWKK-GSVF- 363 (656)
T ss_dssp CCCCCSSSCCCCEEEEETTTTEEE-EETTSCSGGGCC-CCT---TG-GG------------TTTCSCCEEECGG-GCEE-
T ss_pred eCcccCCcccccceEeCCCCCcce-eCCCcccccccc-ccc---cc-ee------------ecCCceEEEECCC-CcEE-
Confidence 99 35899999999997 56 34442 221 11 11 2588999999975 2210
Q ss_pred ccccccccCCCCceEEEEeeCCCCceEee--cCCC------CccccceEE--eCCCeEEEEcCCCCCCCCCCCCCCCCcc
Q 035640 338 SETKKQFFPALQDCGRIDITKPNAVWKKE--RMPS------PRVMGDMVI--LPTEDILLLNGAKTGTSGWNDAEDPNLV 407 (596)
Q Consensus 338 ~~~~~~~~~a~~s~~~id~~~~~~~W~~~--~M~~------~R~~~~avv--LpdG~V~vvGG~~~g~~g~~~~~~~~~s 407 (596)
....++.+++||+. +++|... .++. +|..+.+++ ..+|+|||+||..... + ....+....
T Consensus 364 ------~~~~~~~v~~yd~~--~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~-~-~~~~~~~~~ 433 (656)
T 1k3i_A 364 ------QAGPSTAMNWYYTS--GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ-D-SDATTNAHI 433 (656)
T ss_dssp ------ECCSSSEEEEEECS--TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSS-S-SBCCCCEEE
T ss_pred ------EecCccceeeeecC--CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCC-C-CCcCCcceE
Confidence 01235788999987 7787654 3333 344555454 2599999999975210 0 001122336
Q ss_pred cEEEcCCCCCCCceEEec--CCCcccccceEEEEcCCCcEEEecCCCCCccccCCCCCCcceEEEEcCCC
Q 035640 408 PALYTPRGPSRQRFKELA--AGTIPRMYHSSSVLLPDGTVLVAGSNTHNGYILDAKYPTELRVEKFSPPY 475 (596)
Q Consensus 408 ~e~YDP~t~~g~~Wt~~a--~~~~~R~yhs~a~LlpDG~Vlv~GG~~~~~~~~~~~~p~~~~vE~y~Ppy 475 (596)
+++|||+++ +|+.+. +|+.+|..|+++ +++||+|||+||...... +.... ...++|+|+|..
T Consensus 434 v~~yd~~~~---~W~~~~~~~mp~~R~~~~~~-~l~~g~i~v~GG~~~~~~-~~~~~-~~~~v~~ydp~t 497 (656)
T 1k3i_A 434 ITLGEPGTS---PNTVFASNGLYFARTFHTSV-VLPDGSTFITGGQRRGIP-FEDST-PVFTPEIYVPEQ 497 (656)
T ss_dssp EECCSTTSC---CEEEECTTCCSSCCBSCEEE-ECTTSCEEEECCBSBCCT-TCCCS-BCCCCEEEEGGG
T ss_pred EEcCCCCCC---CeeEEccCCCCCCcccCCeE-ECCCCCEEEECCcccCcC-cCCCC-cccceEEEcCCC
Confidence 899999999 999987 999999999754 569999999999643210 00001 135899999976
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.95 E-value=1.5e-26 Score=242.69 Aligned_cols=275 Identities=13% Similarity=0.094 Sum_probs=190.5
Q ss_pred eeeeeccCCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCC--CCCEEeCcCCC-ccccccCeec
Q 035640 74 MHAILLPKINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFE--TSELTALKLQT-DTWCSSGGLT 150 (596)
Q Consensus 74 ~~~~ll~~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~--t~~w~~l~~~~-~~fc~~~~~l 150 (596)
-|++++ .+++||++||.+. ....+||+. +++|+.++.+. ..++..+++.
T Consensus 12 ~~~~~~-~~~~iyv~GG~~~---------------------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~ 63 (357)
T 2uvk_A 12 SGTGAI-DNDTVYIGLGSAG---------------------------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF 63 (357)
T ss_dssp SCEEEE-ETTEEEEECGGGT---------------------------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE
T ss_pred ceEEEE-ECCEEEEEeCcCC---------------------------CeEEEEccccCCCCeeECCCCCCCcCccceEEE
Confidence 366665 6999999998541 026789998 49999999887 6777777777
Q ss_pred CCCcEEEEcCC-C--C----CCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccCCcEEEEcCCCC-----------
Q 035640 151 ADGDLVSTGGF-G--G----GANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPDGGFIVVGGRGA----------- 211 (596)
Q Consensus 151 ~dG~ilv~GG~-~--~----g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyViGG~~~----------- 211 (596)
.+++|||+||. . + ..+++++|||. +++|++++. |+ .+|..++++++ +++|||+||.+.
T Consensus 64 ~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~-~~~W~~~~~-~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~ 140 (357)
T 2uvk_A 64 IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK-TNSWVKLMS-HAPMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDLN 140 (357)
T ss_dssp ETTEEEEECCEEECTTSCEEECCCEEEEETT-TTEEEECSC-CCSSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHHH
T ss_pred ECCEEEEEcCCCCCCCccceeeccEEEEeCC-CCcEEECCC-CCCcccccceEEEE-CCEEEEEeCcCCCcCcccccchh
Confidence 89999999998 2 1 25789999999 999999986 88 99999988886 999999999752
Q ss_pred ---------------------------CcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcC
Q 035640 212 ---------------------------FSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSP 263 (596)
Q Consensus 212 ---------------------------~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~ 263 (596)
..+++| |.+++|... ..+|.. . .+.++.++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~--~------------------~~~~~~~~~ 199 (357)
T 2uvk_A 141 EAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA-GESPWY--G------------------TAGAAVVNK 199 (357)
T ss_dssp HHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE-EECSSC--C------------------CBSCEEEEE
T ss_pred hcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC-CCCCCC--C------------------cccccEEEE
Confidence 468899 999988631 112211 0 122556677
Q ss_pred CCcEEEEecc--------eeEEecC--CCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCC
Q 035640 264 DGNLFIFSNN--------RSILLDP--KANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWD 333 (596)
Q Consensus 264 dG~Ifv~Gg~--------~~e~yDp--~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~ 333 (596)
+++||++||. +.++||+ .+++|. .+++||. +|... ..++++ .+++||++||....
T Consensus 200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~-~~~~~-~~~~~~------------~~~~iyv~GG~~~~ 264 (357)
T 2uvk_A 200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSS-PDGVA-GGFAGI------------SNDSLIFAGGAGFK 264 (357)
T ss_dssp TTEEEEECCEEETTEECCCEEEEECC---CEEE-ECCCSST-TTCCB-SCEEEE------------ETTEEEEECCEECT
T ss_pred CCEEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCC-Ccccc-cceEEE------------ECCEEEEEcCcccc
Confidence 9999999984 3567865 999997 6888864 44321 222332 48999999996421
Q ss_pred cccccccc-----ccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcc
Q 035640 334 SFYFSETK-----KQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLV 407 (596)
Q Consensus 334 ~~~~~~~~-----~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s 407 (596)
........ ......+.++++||+. +++|+.. +|+.+|..|.+ +..+++|||+||.+.. .....+
T Consensus 265 ~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~-------~~~~~~ 334 (357)
T 2uvk_A 265 GSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRAYGVS-LPWNNSLLIIGGETAG-------GKAVTD 334 (357)
T ss_dssp THHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEE-EEETTEEEEEEEECGG-------GCEEEE
T ss_pred CCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCCCccccee-EEeCCEEEEEeeeCCC-------CCEeee
Confidence 10000000 0001224578899987 8999999 99999999975 4569999999997521 122457
Q ss_pred cEEEcCCCCCCCceEEecCCC
Q 035640 408 PALYTPRGPSRQRFKELAAGT 428 (596)
Q Consensus 408 ~e~YDP~t~~g~~Wt~~a~~~ 428 (596)
+++|+-+++ +|.+..+.+
T Consensus 335 v~~l~~~~~---~~~~~~~~~ 352 (357)
T 2uvk_A 335 SVLITVKDN---KVTVQNLEH 352 (357)
T ss_dssp EEEEEC-CC---SCEEEC---
T ss_pred EEEEEEcCc---EeEeeeccc
Confidence 889999999 998876654
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.92 E-value=6.5e-24 Score=243.49 Aligned_cols=268 Identities=12% Similarity=0.088 Sum_probs=184.9
Q ss_pred ceEeccCCCcccceeeeeccCCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCEEeCc-C-
Q 035640 61 KWELVSENSGVSAMHAILLPKINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSELTALK-L- 138 (596)
Q Consensus 61 ~W~~v~~~~~~~a~~~~ll~~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~-~- 138 (596)
+|...........-|+++ .+++||++||.+. . . ...+.+||+.+++|+.++ .
T Consensus 378 ~~~~~~~~p~rr~g~~~~--~~~~iyv~GG~~~--~--~--------------------~~~v~~yd~~~~~W~~~~~~~ 431 (695)
T 2zwa_A 378 QLLECECPINRKFGDVDV--AGNDVFYMGGSNP--Y--R--------------------VNEILQLSIHYDKIDMKNIEV 431 (695)
T ss_dssp EEEECCCTTCCBSCEEEE--CSSCEEEECCBSS--S--B--------------------CCCEEEEEECSSCEEEEECCC
T ss_pred eEeccCCCCCCceeEEEE--ECCEEEEECCCCC--C--C--------------------cCcEEEEECCCCeEEEeccCC
Confidence 444432222233334444 5899999998642 1 0 124789999999999987 4
Q ss_pred ----CCccccccCeecC--CCcEEEEcCCCC---CCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCC
Q 035640 139 ----QTDTWCSSGGLTA--DGDLVSTGGFGG---GANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGR 209 (596)
Q Consensus 139 ----~~~~fc~~~~~l~--dG~ilv~GG~~~---g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~ 209 (596)
+...++..+++.. +|+|||+||... ..+++++||+. +++|+.+++ |+.+|++|+++++.+|+|||+||.
T Consensus 432 p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~-t~~W~~~~~-~p~~R~~h~~~~~~~~~iyv~GG~ 509 (695)
T 2zwa_A 432 SSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK-TREWSMIKS-LSHTRFRHSACSLPDGNVLILGGV 509 (695)
T ss_dssp CCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT-TTEEEECCC-CSBCCBSCEEEECTTSCEEEECCB
T ss_pred CCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC-CCcEEECCC-CCCCcccceEEEEcCCEEEEECCC
Confidence 3444544444555 999999999764 25789999999 999999975 999999999998779999999996
Q ss_pred CCCcEEEeCCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecceeEEecCCCCeEEEee
Q 035640 210 GAFSYEYIPPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNRSILLDPKANKVVREF 289 (596)
Q Consensus 210 ~~~~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~~e~yDp~t~~w~~~l 289 (596)
+... ++++||+.+++|. .+
T Consensus 510 ~~~~------------------------------------------------------------~v~~yd~~t~~W~-~~ 528 (695)
T 2zwa_A 510 TEGP------------------------------------------------------------AMLLYNVTEEIFK-DV 528 (695)
T ss_dssp CSSC------------------------------------------------------------SEEEEETTTTEEE-EC
T ss_pred CCCC------------------------------------------------------------CEEEEECCCCceE-Ec
Confidence 3210 2567999999997 67
Q ss_pred cc---ccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCc----
Q 035640 290 PI---LTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAV---- 362 (596)
Q Consensus 290 p~---mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~---- 362 (596)
++ +|. +|.. .+++++. ...++||++||...+. ...++++++||+. +++
T Consensus 529 ~~~g~~p~-~r~~---~~a~v~~---------~~~~~iyv~GG~~~~~----------~~~~~~v~~yd~~--~~~w~~~ 583 (695)
T 2zwa_A 529 TPKDEFFQ-NSLV---SAGLEFD---------PVSKQGIILGGGFMDQ----------TTVSDKAIIFKYD--AENATEP 583 (695)
T ss_dssp CCSSGGGG-SCCB---SCEEEEE---------TTTTEEEEECCBCTTS----------SCBCCEEEEEEEC--TTCSSCC
T ss_pred cCCCCCCC-cccc---eeEEEEe---------CCCCEEEEECCcCCCC----------CeeeCcEEEEEcc--CCccccc
Confidence 75 664 5542 2323221 1138999999975211 1246789999998 677
Q ss_pred --eEee-cC-CCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCc--------c
Q 035640 363 --WKKE-RM-PSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTI--------P 430 (596)
Q Consensus 363 --W~~~-~M-~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~--------~ 430 (596)
|+.. +| +.+|..|+++++-||+|||+||.+... .......+++|||+++ +|+.+ +++. .
T Consensus 584 ~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~v~~yd~~t~---~W~~~-~~p~~~~~~~~p~ 654 (695)
T 2zwa_A 584 ITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSG-----LFDRTNSIISLDPLSE---TLTSI-PISRRIWEDHSLM 654 (695)
T ss_dssp EEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSC-----CCCTTTSEEEEETTTT---EEEEC-CCCHHHHHHSCCC
T ss_pred eEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCC-----CCCCCCeEEEEECCCC---eEEEe-eccccccCCCCcc
Confidence 8887 76 589999976665339999999975210 1123457899999999 99953 2221 2
Q ss_pred cccceEEEEcCCCcEEEecCCC
Q 035640 431 RMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 431 R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
|..|++ +.+.||+|||.||+.
T Consensus 655 ~~gh~~-~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 655 LAGFSL-VSTSMGTIHIIGGGA 675 (695)
T ss_dssp CSSCEE-ECC---CEEEECCEE
T ss_pred ceeeeE-EEeCCCEEEEEeCCc
Confidence 345764 456778999999974
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.88 E-value=2.1e-21 Score=222.62 Aligned_cols=223 Identities=15% Similarity=0.151 Sum_probs=169.5
Q ss_pred CeecCCCcEEEEcCCCC-CCCeEEEEeCCCCCceeecC-c----CCCCcccccEEEEcc-CCcEEEEcCCCCCcEEEeCC
Q 035640 147 GGLTADGDLVSTGGFGG-GANTVRYLSTCDGCDWREYP-T----ALADPRWYSTQVTLP-DGGFIVVGGRGAFSYEYIPP 219 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~-g~~~v~~fdP~~t~~W~~~~-~----~M~~~R~y~s~~~L~-dG~VyViGG~~~~~~E~yP~ 219 (596)
+++..+++|||+||... ..+++++|||. +++|+.++ . .|+.+|++|+++++. +|+|||+||.+....
T Consensus 392 ~~~~~~~~iyv~GG~~~~~~~~v~~yd~~-~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~----- 465 (695)
T 2zwa_A 392 DVDVAGNDVFYMGGSNPYRVNEILQLSIH-YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQ----- 465 (695)
T ss_dssp EEEECSSCEEEECCBSSSBCCCEEEEEEC-SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTC-----
T ss_pred EEEEECCEEEEECCCCCCCcCcEEEEECC-CCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCC-----
Confidence 44447999999999753 35789999999 99999886 2 389999999999987 899999999753210
Q ss_pred CCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecceeEEecCCCCeEEEeeccccCCCCCC
Q 035640 220 EGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNRSILLDPKANKVVREFPILTGGSRNY 299 (596)
Q Consensus 220 ~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~~e~yDp~t~~w~~~lp~mp~~~R~~ 299 (596)
.+ +++++||+.+++|. .+++||. +|..
T Consensus 466 ------------~~---------------------------------------~dv~~yd~~t~~W~-~~~~~p~-~R~~ 492 (695)
T 2zwa_A 466 ------------GL---------------------------------------SDNWIFDMKTREWS-MIKSLSH-TRFR 492 (695)
T ss_dssp ------------BC---------------------------------------CCCEEEETTTTEEE-ECCCCSB-CCBS
T ss_pred ------------cc---------------------------------------ccEEEEeCCCCcEE-ECCCCCC-Cccc
Confidence 00 13678999999997 7899985 6653
Q ss_pred CCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-c---CCCCcccc
Q 035640 300 PASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-R---MPSPRVMG 375 (596)
Q Consensus 300 p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~---M~~~R~~~ 375 (596)
.+++++ .+++||++||.+. . . ++++||+. +++|+.. + ||.+|..|
T Consensus 493 ---h~~~~~-----------~~~~iyv~GG~~~-~-------------~-~v~~yd~~--t~~W~~~~~~g~~p~~r~~~ 541 (695)
T 2zwa_A 493 ---HSACSL-----------PDGNVLILGGVTE-G-------------P-AMLLYNVT--EEIFKDVTPKDEFFQNSLVS 541 (695)
T ss_dssp ---CEEEEC-----------TTSCEEEECCBCS-S-------------C-SEEEEETT--TTEEEECCCSSGGGGSCCBS
T ss_pred ---ceEEEE-----------cCCEEEEECCCCC-C-------------C-CEEEEECC--CCceEEccCCCCCCCcccce
Confidence 333331 3899999999751 1 1 78999987 8999987 5 99999999
Q ss_pred ceEEeCC---CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCc------eEEecCC-CcccccceEEEEcCC-Cc
Q 035640 376 DMVILPT---EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQR------FKELAAG-TIPRMYHSSSVLLPD-GT 444 (596)
Q Consensus 376 ~avvLpd---G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~------Wt~~a~~-~~~R~yhs~a~LlpD-G~ 444 (596)
+++++ + |+|||+||.... +......+++|||.++ + |+.+.++ +.+|..|+++++ + |+
T Consensus 542 ~a~v~-~~~~~~iyv~GG~~~~------~~~~~~~v~~yd~~~~---~w~~~~~W~~~~~~p~~~R~~~~~~~~--~~~~ 609 (695)
T 2zwa_A 542 AGLEF-DPVSKQGIILGGGFMD------QTTVSDKAIIFKYDAE---NATEPITVIKKLQHPLFQRYGSQIKYI--TPRK 609 (695)
T ss_dssp CEEEE-ETTTTEEEEECCBCTT------SSCBCCEEEEEEECTT---CSSCCEEEEEEEECGGGCCBSCEEEEE--ETTE
T ss_pred eEEEE-eCCCCEEEEECCcCCC------CCeeeCcEEEEEccCC---ccccceEEEEcCCCCCCCcccceEEEe--CCCE
Confidence 75554 5 899999997521 1123457899999999 8 9999886 589999988876 6 99
Q ss_pred EEEecCCCCCccccCCCCCCcceEEEEcCCCC
Q 035640 445 VLVAGSNTHNGYILDAKYPTELRVEKFSPPYL 476 (596)
Q Consensus 445 Vlv~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl 476 (596)
|||.||...... ......+|+|+|...
T Consensus 610 iyv~GG~~~~~~-----~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 610 LLIVGGTSPSGL-----FDRTNSIISLDPLSE 636 (695)
T ss_dssp EEEECCBCSSCC-----CCTTTSEEEEETTTT
T ss_pred EEEECCccCCCC-----CCCCCeEEEEECCCC
Confidence 999999643321 011357999999874
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.75 E-value=0.026 Score=56.13 Aligned_cols=246 Identities=11% Similarity=0.076 Sum_probs=125.1
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCccc-ccEEEEccCC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRW-YSTQVTLPDG 201 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~-y~s~~~L~dG 201 (596)
..+||..+.+....-..+..........++|+++++|+.+ ..+++||.. +.+-... +..... -.+...-+++
T Consensus 47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~-~~~~~~~---~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVS-SGKCLKT---LKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCEEEE---EECCSSCEEEEEECSSS
T ss_pred EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECC-CCcEEEE---EcCCCCCEEEEEEcCCC
Confidence 5678877776654322232222334456799999999864 578999986 5442211 221111 1234455688
Q ss_pred cEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEe
Q 035640 202 GFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILL 278 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~y 278 (596)
+.++.|+.++ .+.+| ..+.+- ...+.... .. --.....++|++++.|+.+ ..+|
T Consensus 120 ~~l~s~~~d~-~i~iwd~~~~~~------~~~~~~~~---------------~~-v~~~~~~~~~~~l~~~~~d~~i~~w 176 (312)
T 4ery_A 120 NLIVSGSFDE-SVRIWDVKTGKC------LKTLPAHS---------------DP-VSAVHFNRDGSLIVSSSYDGLCRIW 176 (312)
T ss_dssp SEEEEEETTS-CEEEEETTTCCE------EEEECCCS---------------SC-EEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CEEEEEeCCC-cEEEEECCCCEE------EEEecCCC---------------Cc-EEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 9999888764 45666 433210 00000000 00 0012335789988888754 6789
Q ss_pred cCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeC
Q 035640 279 DPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITK 358 (596)
Q Consensus 279 Dp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~ 358 (596)
|..+.+....+.. ....+ -..+.+ ..+++.+++|+.+ ..+..+|+.
T Consensus 177 d~~~~~~~~~~~~----~~~~~--~~~~~~----------~~~~~~l~~~~~d-----------------~~i~iwd~~- 222 (312)
T 4ery_A 177 DTASGQCLKTLID----DDNPP--VSFVKF----------SPNGKYILAATLD-----------------NTLKLWDYS- 222 (312)
T ss_dssp ETTTCCEEEEECC----SSCCC--EEEEEE----------CTTSSEEEEEETT-----------------TEEEEEETT-
T ss_pred ECCCCceeeEEec----cCCCc--eEEEEE----------CCCCCEEEEEcCC-----------------CeEEEEECC-
Confidence 9988765433311 11100 111111 1356777777654 234456654
Q ss_pred CCCceEee--cCCCCc-cccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccce
Q 035640 359 PNAVWKKE--RMPSPR-VMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHS 435 (596)
Q Consensus 359 ~~~~W~~~--~M~~~R-~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs 435 (596)
+.+-... ...... ........+++++++.|+.+ | .+.+||..+. +-. ..+......-.
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~~---~~~--~~~~~h~~~v~ 283 (312)
T 4ery_A 223 -KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-N------------LVYIWNLQTK---EIV--QKLQGHTDVVI 283 (312)
T ss_dssp -TTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-S------------CEEEEETTTC---CEE--EEECCCSSCEE
T ss_pred -CCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-C------------EEEEEECCCc---hhh--hhhhccCCcEE
Confidence 2221111 111111 11112334788988888864 1 4689998876 321 11111111112
Q ss_pred EEEEcCCCcEEEecCC
Q 035640 436 SSVLLPDGTVLVAGSN 451 (596)
Q Consensus 436 ~a~LlpDG~Vlv~GG~ 451 (596)
....-|+++.++.++.
T Consensus 284 ~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 284 STACHPTENIIASAAL 299 (312)
T ss_dssp EEEECSSSSEEEEEEC
T ss_pred EEeecCcCCceEEEEc
Confidence 3345689999988764
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.67 E-value=0.024 Score=57.71 Aligned_cols=269 Identities=14% Similarity=0.104 Sum_probs=138.8
Q ss_pred eEEEEeCCCCCEEeCcC------CCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceee-cCcCCCCcccccE
Q 035640 122 HSVLFDFETSELTALKL------QTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWRE-YPTALADPRWYST 194 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~------~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~-~~~~M~~~R~y~s 194 (596)
....||++|+++...-. ..-.++. +..+.++++|++... ...+.++|+. +.+-.. ++. ...++ .
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~-~i~~~~~~lyv~~~~---~~~v~viD~~-t~~~~~~i~~-~~~p~---~ 88 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDVAQ-SMVIRDGIGWIVVNN---SHVIFAIDIN-TFKEVGRITG-FTSPR---Y 88 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSCEE-EEEEETTEEEEEEGG---GTEEEEEETT-TCCEEEEEEC-CSSEE---E
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCccce-EEEEECCEEEEEEcC---CCEEEEEECc-ccEEEEEcCC-CCCCc---E
Confidence 47899999999875310 0001111 123457888888642 3579999998 665422 221 22232 2
Q ss_pred EEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEe--
Q 035640 195 QVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFS-- 271 (596)
Q Consensus 195 ~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~G-- 271 (596)
.+.-+||++||.... ...+.++ +++.+-. ...+.-... ...-.|...+..+++||+..
T Consensus 89 i~~~~~g~lyv~~~~-~~~v~~iD~~t~~~~---~~i~~g~~~---------------~~~~~p~~i~~~~~~lyv~~~~ 149 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIW-DYRIFIINPKTYEIT---GYIECPDMD---------------MESGSTEQMVQYGKYVYVNCWS 149 (328)
T ss_dssp EEEEETTEEEEEEBS-CSEEEEEETTTTEEE---EEEECTTCC---------------TTTCBCCCEEEETTEEEEEECT
T ss_pred EEEeCCCeEEEEECC-CCeEEEEECCCCeEE---EEEEcCCcc---------------ccCCCcceEEEECCEEEEEcCC
Confidence 333378999998743 2345555 5543210 001110000 00013444445788999985
Q ss_pred -cceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCc
Q 035640 272 -NNRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQD 350 (596)
Q Consensus 272 -g~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s 350 (596)
+....++|+.+++....++. . . .|. +.++ ..++++|++.-...... .+......
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~-g--~--~p~-~i~~------------~~dG~l~v~~~~~~~~~-------~~~~~~~~ 204 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTI-G--I--QPT-SLVM------------DKYNKMWTITDGGYEGS-------PYGYEAPS 204 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEEC-S--S--CBC-CCEE------------CTTSEEEEEBCCBCTTC-------SSCBCCCE
T ss_pred CCCEEEEEECCCCeEEEEEEc-C--C--Ccc-ceEE------------cCCCCEEEEECCCccCC-------ccccCCce
Confidence 34678899999987655532 1 1 121 2221 13788888764220000 00011356
Q ss_pred eEEEEeeCCCCceEee-cCCCCccccceEEeCC-CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCC
Q 035640 351 CGRIDITKPNAVWKKE-RMPSPRVMGDMVILPT-EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGT 428 (596)
Q Consensus 351 ~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpd-G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~ 428 (596)
+.+||+. +.+.... .++....-...++-|| +++|+.++ ++.+||+++. +.....-..
T Consensus 205 v~~id~~--t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~---~~~~~~~~~ 263 (328)
T 3dsm_A 205 LYRIDAE--TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEAD---RVPVRPFLE 263 (328)
T ss_dssp EEEEETT--TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCS---SCCSSCSBC
T ss_pred EEEEECC--CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCC---ceeeeeeec
Confidence 7788875 5555433 5543322223344565 45666543 3568999887 432111111
Q ss_pred c-ccccceEEEEcC-CCcEEEecCCCCCccccCCCCCCcceEEEEcCC
Q 035640 429 I-PRMYHSSSVLLP-DGTVLVAGSNTHNGYILDAKYPTELRVEKFSPP 474 (596)
Q Consensus 429 ~-~R~yhs~a~Llp-DG~Vlv~GG~~~~~~~~~~~~p~~~~vE~y~Pp 474 (596)
. ...-.+.+ +-| +|+|||+.... | -..-+|.+|+|.
T Consensus 264 ~~~~~p~gi~-vdp~~g~lyva~~~~---y------~~~~~V~v~d~~ 301 (328)
T 3dsm_A 264 FRDTKYYGLT-VNPNNGEVYVADAID---Y------QQQGIVYRYSPQ 301 (328)
T ss_dssp CCSSCEEEEE-ECTTTCCEEEEECTT---S------SSEEEEEEECTT
T ss_pred CCCCceEEEE-EcCCCCeEEEEcccc---c------ccCCEEEEECCC
Confidence 1 12223333 456 89999997321 1 113478889876
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.62 E-value=0.024 Score=57.44 Aligned_cols=221 Identities=11% Similarity=0.125 Sum_probs=117.2
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKS 226 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~ 226 (596)
.+.+++.++++|+.+ ..++++|.. +.+-...-. .. ...-.+.+.-+||+.++.|+.++ .+.+| ....+
T Consensus 87 ~~~~~~~~l~s~s~D---~~i~lWd~~-~~~~~~~~~-~~-~~~~~~~~~spdg~~l~~g~~dg-~v~i~~~~~~~---- 155 (321)
T 3ow8_A 87 DISHTLPIAASSSLD---AHIRLWDLE-NGKQIKSID-AG-PVDAWTLAFSPDSQYLATGTHVG-KVNIFGVESGK---- 155 (321)
T ss_dssp EECSSSSEEEEEETT---SEEEEEETT-TTEEEEEEE-CC-TTCCCCEEECTTSSEEEEECTTS-EEEEEETTTCS----
T ss_pred EECCCCCEEEEEeCC---CcEEEEECC-CCCEEEEEe-CC-CccEEEEEECCCCCEEEEEcCCC-cEEEEEcCCCc----
Confidence 345688899998865 579999986 544322111 11 11122455667999999988654 45566 33221
Q ss_pred cccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEecCCCCeEEEeeccccCCCCCCCCCce
Q 035640 227 PVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILLDPKANKVVREFPILTGGSRNYPASAM 304 (596)
Q Consensus 227 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~ 304 (596)
.... +... ...--.+...++|+.++.|+.+ ..+||..+++....+ .+ .. .+..
T Consensus 156 -~~~~-~~~~----------------~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~---~~-h~-~~v~-- 210 (321)
T 3ow8_A 156 -KEYS-LDTR----------------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL---EG-HA-MPIR-- 210 (321)
T ss_dssp -EEEE-EECS----------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CC-CS-SCCC--
T ss_pred -eeEE-ecCC----------------CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE---cc-cC-Ccee--
Confidence 0000 0000 0000122345899999988754 678999888754333 21 11 1111
Q ss_pred EEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCC
Q 035640 305 SVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTE 383 (596)
Q Consensus 305 av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG 383 (596)
++.+ ..+++++++|+.+ ..+..+|+. +.+.... .-...... +...-|||
T Consensus 211 ~l~~----------spd~~~l~s~s~d-----------------g~i~iwd~~--~~~~~~~~~~h~~~v~-~~~~sp~~ 260 (321)
T 3ow8_A 211 SLTF----------SPDSQLLVTASDD-----------------GYIKIYDVQ--HANLAGTLSGHASWVL-NVAFCPDD 260 (321)
T ss_dssp EEEE----------CTTSCEEEEECTT-----------------SCEEEEETT--TCCEEEEECCCSSCEE-EEEECTTS
T ss_pred EEEE----------cCCCCEEEEEcCC-----------------CeEEEEECC--CcceeEEEcCCCCceE-EEEECCCC
Confidence 1111 1367888888865 134456654 2222211 11111222 23446899
Q ss_pred eEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCC
Q 035640 384 DILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 384 ~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
+.++.|+.+. ++.+||..+. +-. ..+......-......|||+.+++||..
T Consensus 261 ~~l~s~s~D~-------------~v~iwd~~~~---~~~--~~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 261 THFVSSSSDK-------------SVKVWDVGTR---TCV--HTFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp SEEEEEETTS-------------CEEEEETTTT---EEE--EEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEeCCC-------------cEEEEeCCCC---EEE--EEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 9999988651 5789998776 321 1111111112234457899999998864
No 22
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.53 E-value=0.03 Score=55.37 Aligned_cols=221 Identities=12% Similarity=0.073 Sum_probs=115.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCC
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSN 224 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~ 224 (596)
..+.++|+.+++|+.+ ..+++||.. +.+...... +... ..-.+.+..++|+.+++|+.++ .+.+| ..+.+.
T Consensus 103 ~~~~~~~~~l~~~~~d---~~i~~~d~~-~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg-~v~~~d~~~~~~- 175 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEA---STLSIWDLA-APTPRIKAE-LTSSAPACYALAISPDSKVCFSCCSDG-NIAVWDLHNQTL- 175 (337)
T ss_dssp EEECTTSSEEEEEESS---SEEEEEECC-CC--EEEEE-EECSSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTTEE-
T ss_pred EEEcCCCCEEEEEcCC---CcEEEEECC-CCCcceeee-cccCCCceEEEEECCCCCEEEEEeCCC-cEEEEeCCCCce-
Confidence 3456789999998754 578999987 555332211 2211 1122445566899999888654 35566 333210
Q ss_pred CCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEecCCCCeEEEeeccccCCCCCCCCC
Q 035640 225 KSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILLDPKANKVVREFPILTGGSRNYPAS 302 (596)
Q Consensus 225 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~yDp~t~~w~~~lp~mp~~~R~~p~~ 302 (596)
...+... ...--.....++|+.++.++. ...+||..+.+-...+. .+. .
T Consensus 176 -----~~~~~~~----------------~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~-------~ 226 (337)
T 1gxr_A 176 -----VRQFQGH----------------TDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS-------Q 226 (337)
T ss_dssp -----EEEECCC----------------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS-------C
T ss_pred -----eeeeecc----------------cCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC-------c
Confidence 0000000 000012234568988888875 36789998876543321 111 1
Q ss_pred ceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeCC
Q 035640 303 AMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILPT 382 (596)
Q Consensus 303 g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpd 382 (596)
-.++.+ ..+++.+++|+.+ ..+..+|+... ...+. .-..... .+....||
T Consensus 227 v~~~~~----------s~~~~~l~~~~~~-----------------~~i~~~~~~~~-~~~~~-~~~~~~v-~~~~~~~~ 276 (337)
T 1gxr_A 227 IFSLGY----------CPTGEWLAVGMES-----------------SNVEVLHVNKP-DKYQL-HLHESCV-LSLKFAYC 276 (337)
T ss_dssp EEEEEE----------CTTSSEEEEEETT-----------------SCEEEEETTSS-CEEEE-CCCSSCE-EEEEECTT
T ss_pred eEEEEE----------CCCCCEEEEEcCC-----------------CcEEEEECCCC-CeEEE-cCCccce-eEEEECCC
Confidence 111111 1366777777643 23455665421 11111 1111222 22355789
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCC
Q 035640 383 EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 383 G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
|+++++++.+ | .+.+||..+. +-..... ... .-....+.|||+.+++|+..
T Consensus 277 ~~~l~~~~~d-g------------~i~~~~~~~~---~~~~~~~--~~~-~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 277 GKWFVSTGKD-N------------LLNAWRTPYG---ASIFQSK--ESS-SVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp SSEEEEEETT-S------------EEEEEETTTC---CEEEEEE--CSS-CEEEEEECTTSCEEEEEETT
T ss_pred CCEEEEecCC-C------------cEEEEECCCC---eEEEEec--CCC-cEEEEEECCCCCEEEEecCC
Confidence 9999988764 1 5789998876 4322111 111 11234467899999998864
No 23
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.47 E-value=0.02 Score=57.09 Aligned_cols=216 Identities=12% Similarity=0.030 Sum_probs=118.8
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCC--ceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcc
Q 035640 152 DGDLVSTGGFGGGANTVRYLSTCDGC--DWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPV 228 (596)
Q Consensus 152 dG~ilv~GG~~~g~~~v~~fdP~~t~--~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~ 228 (596)
.|+++++|..+ ..+.++|+. +. .|+.... .....+.+..++||++|+.+ ...+..| | +++- .|.
T Consensus 4 ~~~~lv~~~~~---~~v~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~pdG~ilvs~---~~~V~~~d~-~G~~--~W~ 70 (276)
T 3no2_A 4 PQHLLVGGSGW---NKIAIINKD-TKEIVWEYPLE---KGWECNSVAATKAGEILFSY---SKGAKMITR-DGRE--LWN 70 (276)
T ss_dssp CCEEEEECTTC---SEEEEEETT-TTEEEEEEECC---TTCCCCEEEECTTSCEEEEC---BSEEEEECT-TSCE--EEE
T ss_pred CCcEEEeeCCC---CEEEEEECC-CCeEEEEeCCC---ccCCCcCeEECCCCCEEEeC---CCCEEEECC-CCCE--EEE
Confidence 57888887643 678999996 44 4654321 11235677888999999943 2345555 5 4320 011
Q ss_pred cccCcccccccCCCcCCcceeeeccCcc-ceEEEcCCCcEEEEecc---eeEEecCCCCeEEEeeccccCC-CCC-CCCC
Q 035640 229 FFPLLKDTTNDLKGIDGQEMFLIENNLY-PFVYLSPDGNLFIFSNN---RSILLDPKANKVVREFPILTGG-SRN-YPAS 302 (596)
Q Consensus 229 ~~p~l~~t~~~~~g~~~~~~~~~~~~~y-p~~~~~~dG~Ifv~Gg~---~~e~yDp~t~~w~~~lp~mp~~-~R~-~p~~ 302 (596)
. .. +.... ..+..++||++++.... ....+|+.....+ .+.- ... ... .+..
T Consensus 71 ~-~~-------------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~-~~~~-~~~~~~~~~~~~ 128 (276)
T 3no2_A 71 I-AA-------------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLS-KTEF-ETGIERPHAQFR 128 (276)
T ss_dssp E-EC-------------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEE-EEEE-CCSCSSGGGSCS
T ss_pred E-cC-------------------CCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEE-EEec-cCCCCccccccc
Confidence 0 00 00001 12345789999987543 4667788554322 2321 110 000 0111
Q ss_pred ceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeC
Q 035640 303 AMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILP 381 (596)
Q Consensus 303 g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLp 381 (596)
+.++ + .+|.++++...+ ..+..+|+. .+-.|+.. +. +. +++..++
T Consensus 129 ~v~~-~-----------~~G~~lv~~~~~-----------------~~v~~~d~~-G~~~w~~~~~~---~~-~~~~~~~ 174 (276)
T 3no2_A 129 QINK-N-----------KKGNYLVPLFAT-----------------SEVREIAPN-GQLLNSVKLSG---TP-FSSAFLD 174 (276)
T ss_dssp CCEE-C-----------TTSCEEEEETTT-----------------TEEEEECTT-SCEEEEEECSS---CC-CEEEECT
T ss_pred CceE-C-----------CCCCEEEEecCC-----------------CEEEEECCC-CCEEEEEECCC---Cc-cceeEcC
Confidence 2222 1 367777765422 245667765 34578776 41 12 2356789
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecC-CCcccc-cceEEEEcCCCcEEEecC
Q 035640 382 TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAA-GTIPRM-YHSSSVLLPDGTVLVAGS 450 (596)
Q Consensus 382 dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~-~~~~R~-yhs~a~LlpDG~Vlv~GG 450 (596)
+|+++|++... ..+..+||++.. ..|+.-.. ..-.|+ +.+.+.+++||.|||+..
T Consensus 175 ~g~~~v~~~~~-------------~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 175 NGDCLVACGDA-------------HCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp TSCEEEECBTT-------------SEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEeCCC-------------CeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 99999987542 147899999751 24665322 222233 445667789999999973
No 24
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.45 E-value=0.055 Score=54.07 Aligned_cols=271 Identities=10% Similarity=0.058 Sum_probs=129.0
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG 202 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~ 202 (596)
..+||..+.+....-..+........+.++|+.+++|+.+ ..+.+||.. +.+.... +.....-.+.+..++|+
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~---~~~~~~v~~~~~~~~~~ 128 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD---YSIKLWDVS-NGQCVAT---WKSPVPVKRVEFSPCGN 128 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---TEEEEEETT-TCCEEEE---EECSSCEEEEEECTTSS
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC-CCcEEEE---eecCCCeEEEEEccCCC
Confidence 5678877765443222222222223456789999998764 578999986 5543322 22233334566677899
Q ss_pred EEEEcCCC----CCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccC--ccceEEEcCCCcEEEEecc--
Q 035640 203 FIVVGGRG----AFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENN--LYPFVYLSPDGNLFIFSNN-- 273 (596)
Q Consensus 203 VyViGG~~----~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~--~yp~~~~~~dG~Ifv~Gg~-- 273 (596)
.+++++.+ ...+.+| .....-......... .. ......... ........++|+.++.|+.
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIERDSATHELTKVSE-EP----------IHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS-SC----------SEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred EEEEecCCccCCCCEEEEEEecCCccceeeccccc-ce----------eeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 88888765 1345555 222211000000000 00 000000000 1112234578888888765
Q ss_pred eeEEecCCC-CeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceE
Q 035640 274 RSILLDPKA-NKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCG 352 (596)
Q Consensus 274 ~~e~yDp~t-~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 352 (596)
...+||..+ .+....+ .. ... .-.++.+ . .+++.+++|+.+ ..+.
T Consensus 198 ~i~i~d~~~~~~~~~~~---~~-~~~---~v~~~~~--~--------~~~~~l~~~~~d-----------------~~i~ 243 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSI---DL-HEK---SISDMQF--S--------PDLTYFITSSRD-----------------TNSF 243 (369)
T ss_dssp EEEEEETTTTTEEEEEE---EC-CSS---CEEEEEE--C--------TTSSEEEEEETT-----------------SEEE
T ss_pred EEEEEECCCCcEeEEEE---ec-CCC---ceeEEEE--C--------CCCCEEEEecCC-----------------ceEE
Confidence 367899987 4433222 21 110 1111111 1 256677777643 2344
Q ss_pred EEEeeCCCCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCC-CCCCCCcccEEEcCCCCCCCceEEecCCCccc
Q 035640 353 RIDITKPNAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWN-DAEDPNLVPALYTPRGPSRQRFKELAAGTIPR 431 (596)
Q Consensus 353 ~id~~~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~-~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R 431 (596)
.+|+. +.+.... +............|+|+.+++|+.+.+..-+. ...+....+.+||..+.. .-..+... .
T Consensus 244 v~d~~--~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~---~ 315 (369)
T 3zwl_B 244 LVDVS--TLQVLKK-YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--EIGRVQGH---F 315 (369)
T ss_dssp EEETT--TCCEEEE-EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC--EEEEEECC---S
T ss_pred EEECC--CCceeee-ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--chhheecc---c
Confidence 56654 2222222 11111222345679999999988653211000 011112257889977761 11222111 1
Q ss_pred ccceEEEEcCCCcEEEecCCCC
Q 035640 432 MYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 432 ~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
..-.....-|||+.+++|+...
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTS
T ss_pred CcEEEEEECCCCCEEEEEcCCC
Confidence 1123345678999999998643
No 25
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.42 E-value=0.052 Score=56.36 Aligned_cols=255 Identities=13% Similarity=0.091 Sum_probs=121.3
Q ss_pred EEEEeCCCCCEEeCcCC-----CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEE
Q 035640 123 SVLFDFETSELTALKLQ-----TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQV 196 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~-----~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~ 196 (596)
..+||+.+++....... +........+.++|+++++|+.+ ..+++||.. +.+.... +. ....-.+.+
T Consensus 146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~-~~~~~~~---~~~~~~~~~~~~ 218 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK-TLAYKAT---VDLTGKWSKILL 218 (433)
T ss_dssp EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT-TCCEEEE---EECSSSSEEEEE
T ss_pred EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC-CceEEEE---EcCCCCCeeEEE
Confidence 67899988877653221 11111223345689999998753 578999987 5443221 11 112222344
Q ss_pred EccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccce-EEEcCCCcEEEEecc-
Q 035640 197 TLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF-VYLSPDGNLFIFSNN- 273 (596)
Q Consensus 197 ~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~~~~dG~Ifv~Gg~- 273 (596)
.-++|+.+++.+.....+.+| ..+.+. ...+.. .-.+. +...++|+.+++++.
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~------~~~~~~------------------~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLE------IRKTDK------------------IGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEE------EEECCC------------------CSEEEEEEECTTSSEEEEEEEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcE------EEEecC------------------CCCceEEEEcCCCCEEEEEECC
Confidence 556776554444334456666 443311 000000 00122 234578876666552
Q ss_pred ---------eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccc
Q 035640 274 ---------RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQF 344 (596)
Q Consensus 274 ---------~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~ 344 (596)
...+||..+++....+. .+... .+ ...-| ....+|+.++.+
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~-----~~-~~~~~----------~g~~l~~~~~~~------------- 324 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIG-PPGNK-----RH-IVSGN----------TENKIYVSDMCC------------- 324 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEE-EEECE-----EE-EEECS----------STTEEEEEETTT-------------
T ss_pred CCccccCCCeEEEEECCCCcEEeecc-CCCCc-----ce-EEECC----------CCCEEEEEecCC-------------
Confidence 45689998877543221 11100 11 11111 233677776543
Q ss_pred cCCCCceEEEEeeCCCCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCC--CCCCCCCCCcccEEEcCCCCCCCceE
Q 035640 345 FPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTS--GWNDAEDPNLVPALYTPRGPSRQRFK 422 (596)
Q Consensus 345 ~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~--g~~~~~~~~~s~e~YDP~t~~g~~Wt 422 (596)
..+..+|+. +.+-.. .++....-.+...-|||+.+++++...+.. .+-.....--.+.+||.++. +..
T Consensus 325 ----~~v~v~d~~--~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~---~~~ 394 (433)
T 3bws_A 325 ----SKIEVYDLK--EKKVQK-SIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD---TVK 394 (433)
T ss_dssp ----TEEEEEETT--TTEEEE-EEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT---EEE
T ss_pred ----CEEEEEECC--CCcEEE-EecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC---cEE
Confidence 235566654 222211 121111122345568998666665431100 00000000015789999887 543
Q ss_pred EecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 423 ELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 423 ~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
..-.. ... -.....-|||+.+++++.
T Consensus 395 ~~~~~--~~~-~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 395 EFWEA--GNQ-PTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp EEEEC--SSS-EEEEEECTTSCEEEEEET
T ss_pred EEecC--CCC-CceEEEcCCCCEEEEEEC
Confidence 22111 111 123445789988776654
No 26
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.40 E-value=0.028 Score=56.65 Aligned_cols=90 Identities=11% Similarity=0.086 Sum_probs=52.5
Q ss_pred EEEEeCCCCCEEeCcCC--CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccC
Q 035640 123 SVLFDFETSELTALKLQ--TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~--~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~d 200 (596)
..+||..++++..+... +........+.++|+++++|+.+ ..+++||.. +.++............-.+....++
T Consensus 32 v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 32 VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD---RNAYVWTLK-GRTWKPTLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT---SCEEEEEEE-TTEEEEEEECCCCSSCEEEEEECTT
T ss_pred EEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC---CeEEEEECC-CCeeeeeEEeecCCCceeEEEECCC
Confidence 67788877765444322 22122223456789999998854 468899986 6665443210112222334555668
Q ss_pred CcEEEEcCCCCCcEEEe
Q 035640 201 GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y 217 (596)
|+.+++|+.++ .+.+|
T Consensus 108 ~~~l~~~~~d~-~v~i~ 123 (372)
T 1k8k_C 108 EKKFAVGSGSR-VISIC 123 (372)
T ss_dssp SSEEEEEETTS-SEEEE
T ss_pred CCEEEEEeCCC-EEEEE
Confidence 99999988654 34454
No 27
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.40 E-value=0.014 Score=58.36 Aligned_cols=205 Identities=12% Similarity=0.137 Sum_probs=107.3
Q ss_pred EEEEeCCCCC--EEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccC
Q 035640 123 SVLFDFETSE--LTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~--w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~d 200 (596)
..++|++|++ |+.-.. ....+....+++||++|+.+ .+.+..|||...-.|+-.. ......+++..++|
T Consensus 17 v~~~d~~tG~~~w~~~~~-~~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~~G~~~W~~~~---~~~~~~~~~~~~~d 87 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLE-KGWECNSVAATKAGEILFSY-----SKGAKMITRDGRELWNIAA---PAGCEMQTARILPD 87 (276)
T ss_dssp EEEEETTTTEEEEEEECC-TTCCCCEEEECTTSCEEEEC-----BSEEEEECTTSCEEEEEEC---CTTCEEEEEEECTT
T ss_pred EEEEECCCCeEEEEeCCC-ccCCCcCeEECCCCCEEEeC-----CCCEEEECCCCCEEEEEcC---CCCccccccEECCC
Confidence 5667776765 332211 11234445678899999953 2569999995234575432 11112346778999
Q ss_pred CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEec--ceeEE
Q 035640 201 GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSN--NRSIL 277 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg--~~~e~ 277 (596)
|++++........+-.+ | +++.. | ..++-.... . .......+...++|++++... ..+.+
T Consensus 88 G~~lv~~~~~~~~v~~vd~-~Gk~l--~-~~~~~~~~~-------~------~~~~~~~v~~~~~G~~lv~~~~~~~v~~ 150 (276)
T 3no2_A 88 GNALVAWCGHPSTILEVNM-KGEVL--S-KTEFETGIE-------R------PHAQFRQINKNKKGNYLVPLFATSEVRE 150 (276)
T ss_dssp SCEEEEEESTTEEEEEECT-TSCEE--E-EEEECCSCS-------S------GGGSCSCCEECTTSCEEEEETTTTEEEE
T ss_pred CCEEEEecCCCCEEEEEeC-CCCEE--E-EEeccCCCC-------c------ccccccCceECCCCCEEEEecCCCEEEE
Confidence 99999865422223233 4 22210 0 001000000 0 000112334678999888764 35788
Q ss_pred ecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEee
Q 035640 278 LDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDIT 357 (596)
Q Consensus 278 yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~ 357 (596)
||++....+ .+.. + ..| .++.+ + .++.+++++... ..+..+|+.
T Consensus 151 ~d~~G~~~w-~~~~-~----~~~-~~~~~-~-----------~~g~~~v~~~~~-----------------~~v~~~d~~ 194 (276)
T 3no2_A 151 IAPNGQLLN-SVKL-S----GTP-FSSAF-L-----------DNGDCLVACGDA-----------------HCFVQLNLE 194 (276)
T ss_dssp ECTTSCEEE-EEEC-S----SCC-CEEEE-C-----------TTSCEEEECBTT-----------------SEEEEECTT
T ss_pred ECCCCCEEE-EEEC-C----CCc-cceeE-c-----------CCCCEEEEeCCC-----------------CeEEEEeCc
Confidence 999843322 2321 1 112 12222 2 378888876532 234556765
Q ss_pred CCCCceEee--cCCCCcc--ccceEEeCCCeEEEEc
Q 035640 358 KPNAVWKKE--RMPSPRV--MGDMVILPTEDILLLN 389 (596)
Q Consensus 358 ~~~~~W~~~--~M~~~R~--~~~avvLpdG~V~vvG 389 (596)
..+-.|+.. ..+..|. ..+..+++||.|||..
T Consensus 195 tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 195 SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 334578875 3332232 2345678999999997
No 28
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.39 E-value=0.13 Score=51.24 Aligned_cols=248 Identities=12% Similarity=0.084 Sum_probs=120.3
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcc--------cc
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGD-LVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPR--------WY 192 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~-ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R--------~y 192 (596)
...+||+.+.+....-... ....+..+.+||+ +++.+... ..+.+||+. +.+-...-. +.... .-
T Consensus 70 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 143 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVN---SAVTAIDAK-TGEVKGRLV-LDDRKRTEEVRPLQP 143 (353)
T ss_dssp EEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTT---TEEEEEETT-TCCEEEEEE-SCCCCCCSSCCCCEE
T ss_pred cEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCC---CEEEEEeCC-CCeeEEEEe-cCCCccccccCCCCC
Confidence 5788999888754332111 1122345567887 66665532 478999987 554322111 21111 11
Q ss_pred cEEEEccCCc-EEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccce-EEEcCCCcEEE
Q 035640 193 STQVTLPDGG-FIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF-VYLSPDGNLFI 269 (596)
Q Consensus 193 ~s~~~L~dG~-VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~~~~dG~Ifv 269 (596)
...+.-+||+ +|+.+......+.+| +.+.+-. ...+.. ...|. ....+||+.++
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~--------------------~~~~~~~~~s~dg~~l~ 200 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKESVIWVVDGGNIKLK---TAIQNT--------------------GKMSTGLALDSEGKRLY 200 (353)
T ss_dssp EEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE---EEECCC--------------------CTTCCCCEEETTTTEEE
T ss_pred ceEEECCCCCEEEEEecCCCceEEEEcCCCCceE---EEecCC--------------------CCccceEEECCCCCEEE
Confidence 2345556776 566552333445566 5433100 001100 00122 23457877544
Q ss_pred Eecc--eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCC
Q 035640 270 FSNN--RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPA 347 (596)
Q Consensus 270 ~Gg~--~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a 347 (596)
++.. ...+||..+++....++.-..+.+.++ .+ .+. .| ....+|+.....
T Consensus 201 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~-~~~---s~-------dg~~l~~~~~~~---------------- 252 (353)
T 3vgz_A 201 TTNADGELITIDTADNKILSRKKLLDDGKEHFF-IN-ISL---DT-------ARQRAFITDSKA---------------- 252 (353)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCCSSSCCCE-EE-EEE---ET-------TTTEEEEEESSS----------------
T ss_pred EEcCCCeEEEEECCCCeEEEEEEcCCCCCCccc-ce-EEE---CC-------CCCEEEEEeCCC----------------
Confidence 4433 466899988875433322111111111 01 111 11 244566654321
Q ss_pred CCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCe-EEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEec
Q 035640 348 LQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTED-ILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELA 425 (596)
Q Consensus 348 ~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~-V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a 425 (596)
..+.++|+. +.+.... +.+.+ . ....-|||+ +|+.+..+ ..+.+||..+. +....-
T Consensus 253 -~~v~~~d~~--~~~~~~~~~~~~~--~-~~~~s~dg~~l~v~~~~~-------------~~v~~~d~~~~---~~~~~~ 310 (353)
T 3vgz_A 253 -AEVLVVDTR--NGNILAKVAAPES--L-AVLFNPARNEAYVTHRQA-------------GKVSVIDAKSY---KVVKTF 310 (353)
T ss_dssp -SEEEEEETT--TCCEEEEEECSSC--C-CEEEETTTTEEEEEETTT-------------TEEEEEETTTT---EEEEEE
T ss_pred -CEEEEEECC--CCcEEEEEEcCCC--c-eEEECCCCCEEEEEECCC-------------CeEEEEECCCC---eEEEEE
Confidence 345667765 4443333 44433 2 245678998 66665432 15789998887 543222
Q ss_pred CCCcccccceEEEEcCCCc-EEEecCC
Q 035640 426 AGTIPRMYHSSSVLLPDGT-VLVAGSN 451 (596)
Q Consensus 426 ~~~~~R~yhs~a~LlpDG~-Vlv~GG~ 451 (596)
.....-++ ..+.|||+ +|++...
T Consensus 311 --~~~~~~~~-~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 311 --DTPTHPNS-LALSADGKTLYVSVKQ 334 (353)
T ss_dssp --ECCSEEEE-EEECTTSCEEEEEEEC
T ss_pred --ecCCCCCe-EEEcCCCCEEEEEEcc
Confidence 22222233 34568998 7776654
No 29
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.38 E-value=0.12 Score=50.28 Aligned_cols=240 Identities=16% Similarity=0.172 Sum_probs=118.3
Q ss_pred EEEEeCCCCCEEeCcCC-CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccC
Q 035640 123 SVLFDFETSELTALKLQ-TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~-~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~d 200 (596)
...||+. +++...... ......+.+...+|++++.... ...+..||+. .++.... ++ ....-.+.+.-++
T Consensus 38 v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~--g~~~~~~--~~~~~~~~~~i~~~~~ 109 (299)
T 2z2n_A 38 ISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITKK--GIIKEYT--LPNPDSAPYGITEGPN 109 (299)
T ss_dssp EEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECTT
T ss_pred EEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECCC--CcEEEEe--CCCcCCCceeeEECCC
Confidence 5677887 766654322 1122222334578999998543 2468889985 3443332 22 1222234555568
Q ss_pred CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEE-EcCCCcEEEEec--ceeE
Q 035640 201 GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVY-LSPDGNLFIFSN--NRSI 276 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~-~~~dG~Ifv~Gg--~~~e 276 (596)
|++|+..... ..+..+ + +++.. ..... . ....|... .-++|+||+... ....
T Consensus 110 g~l~v~~~~~-~~i~~~d~-~g~~~----~~~~~-~-----------------~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 110 GDIWFTEMNG-NRIGRITD-DGKIR----EYELP-N-----------------KGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp SCEEEEETTT-TEEEEECT-TCCEE----EEECS-S-----------------TTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCEEEEecCC-ceEEEECC-CCCEE----EecCC-C-----------------CCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 9999975432 334455 4 32110 00000 0 01123333 346899998763 4577
Q ss_pred EecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEe
Q 035640 277 LLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDI 356 (596)
Q Consensus 277 ~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~ 356 (596)
+||+ +++.. .+. ++. ....| ..+.+ ..+++||+..... ..+.++|+
T Consensus 166 ~~~~-~g~~~-~~~-~~~-~~~~~---~~i~~----------~~~g~l~v~~~~~-----------------~~i~~~~~ 211 (299)
T 2z2n_A 166 RITE-SGDIT-EFK-IPT-PASGP---VGITK----------GNDDALWFVEIIG-----------------NKIGRITT 211 (299)
T ss_dssp EECT-TCCEE-EEE-CSS-TTCCE---EEEEE----------CTTSSEEEEETTT-----------------TEEEEECT
T ss_pred EEcC-CCcEE-Eee-CCC-CCCcc---eeEEE----------CCCCCEEEEccCC-----------------ceEEEECC
Confidence 8999 66654 231 121 11111 12211 1357788865321 23455655
Q ss_pred eCCCCceEeecCCCCcccc-ceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccce
Q 035640 357 TKPNAVWKKERMPSPRVMG-DMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHS 435 (596)
Q Consensus 357 ~~~~~~W~~~~M~~~R~~~-~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs 435 (596)
+.++....++...... +..+-++|+||+..... ..+.+||| +. +............-++
T Consensus 212 ---~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-------------~~i~~~d~-~g---~~~~~~~~~~~~~~~~ 271 (299)
T 2z2n_A 212 ---SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA-------------NKIGRLTS-NN---IIEEYPIQIKSAEPHG 271 (299)
T ss_dssp ---TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-------------TEEEEEET-TT---EEEEEECSSSSCCEEE
T ss_pred ---CCcEEEEECCCCCCCceeEEECCCCCEEEeccCC-------------ceEEEECC-CC---ceEEEeCCCCCCccce
Confidence 2333332222111112 23345789999875321 14678998 44 5554421111112233
Q ss_pred EEEEcCCCcEEEecC
Q 035640 436 SSVLLPDGTVLVAGS 450 (596)
Q Consensus 436 ~a~LlpDG~Vlv~GG 450 (596)
.++ ++|++|++..
T Consensus 272 i~~--~~g~l~v~~~ 284 (299)
T 2z2n_A 272 ICF--DGETIWFAME 284 (299)
T ss_dssp EEE--CSSCEEEEET
T ss_pred EEe--cCCCEEEEec
Confidence 444 8999999864
No 30
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.36 E-value=0.035 Score=56.32 Aligned_cols=248 Identities=17% Similarity=0.167 Sum_probs=122.2
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCc--eeecCcCCCCccccc-EEEEcc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCD--WREYPTALADPRWYS-TQVTLP 199 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~--W~~~~~~M~~~R~y~-s~~~L~ 199 (596)
..+||..+.+....-..+........+.++|+.+++||.+ ..+++||.. +.+ ..... .+....... ++...+
T Consensus 79 v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~-~~~~~~~~~~-~~~~h~~~v~~~~~~~ 153 (340)
T 1got_B 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLK-TREGNVRVSR-ELAGHTGYLSCCRFLD 153 (340)
T ss_dssp EEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETT-TCSBSCEEEE-EEECCSSCEEEEEEEE
T ss_pred EEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECc-cCCCcceeEE-EecCCCccEEEEEECC
Confidence 6778877765433222222222233456799999999875 578999976 432 11110 111111112 223344
Q ss_pred CCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeE
Q 035640 200 DGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSI 276 (596)
Q Consensus 200 dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e 276 (596)
+++ ++.|+.+ ..+.+| ..+++ ....+.... ..--.+...++|++++.|+. ...
T Consensus 154 ~~~-l~s~s~d-~~i~~wd~~~~~------~~~~~~~h~----------------~~v~~~~~~~~~~~l~sg~~d~~v~ 209 (340)
T 1got_B 154 DNQ-IVTSSGD-TTCALWDIETGQ------QTTTFTGHT----------------GDVMSLSLAPDTRLFVSGACDASAK 209 (340)
T ss_dssp TTE-EEEEETT-SCEEEEETTTTE------EEEEECCCS----------------SCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCc-EEEEECC-CcEEEEECCCCc------EEEEEcCCC----------------CceEEEEECCCCCEEEEEeCCCcEE
Confidence 666 4455543 346666 43321 000010000 00012334579999998875 467
Q ss_pred EecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEe
Q 035640 277 LLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDI 356 (596)
Q Consensus 277 ~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~ 356 (596)
+||..+.+-...+ .+ ... .-.++.+ ..+++.+++|+.+ .++..+|+
T Consensus 210 ~wd~~~~~~~~~~---~~-h~~---~v~~v~~----------~p~~~~l~s~s~d-----------------~~v~iwd~ 255 (340)
T 1got_B 210 LWDVREGMCRQTF---TG-HES---DINAICF----------FPNGNAFATGSDD-----------------ATCRLFDL 255 (340)
T ss_dssp EEETTTCSEEEEE---CC-CSS---CEEEEEE----------CTTSSEEEEEETT-----------------SCEEEEET
T ss_pred EEECCCCeeEEEE---cC-CcC---CEEEEEE----------cCCCCEEEEEcCC-----------------CcEEEEEC
Confidence 8998877644333 21 111 1112211 1267788888754 23445665
Q ss_pred eCCCCceEee-cCCCCcc-ccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccc
Q 035640 357 TKPNAVWKKE-RMPSPRV-MGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYH 434 (596)
Q Consensus 357 ~~~~~~W~~~-~M~~~R~-~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yh 434 (596)
. +.+-... ....... -.+...-|||+++++|+.+ | .+.+||..+.. .-..+.... ..-
T Consensus 256 ~--~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~~--~~~~~~~h~---~~v 315 (340)
T 1got_B 256 R--ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-F------------NCNVWDALKAD--RAGVLAGHD---NRV 315 (340)
T ss_dssp T--TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------EEEEEETTTCC--EEEEEECCS---SCE
T ss_pred C--CCcEEEEEccCCcccceEEEEECCCCCEEEEECCC-C------------eEEEEEcccCc--EeeEeecCC---CcE
Confidence 4 2221111 1111111 1122346899999998764 1 57899977651 222222211 111
Q ss_pred eEEEEcCCCcEEEecCCCC
Q 035640 435 SSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 435 s~a~LlpDG~Vlv~GG~~~ 453 (596)
.+...-|||+.++.||...
T Consensus 316 ~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 316 SCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EEEEECTTSSCEEEEETTS
T ss_pred EEEEEcCCCCEEEEEcCCc
Confidence 2334568999999988643
No 31
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.30 E-value=0.033 Score=58.34 Aligned_cols=256 Identities=14% Similarity=0.165 Sum_probs=125.0
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEEccCC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVTLPDG 201 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~L~dG 201 (596)
..+||..+.+....-..+........+.++|+++++|+.+ ..+++||.. +.+-.. . +... ..-.+++..++|
T Consensus 132 i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~-~~~~~~--~-~~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIKLWDFQ-GFECIR--T-MHGHDHNVSSVSIMPNG 204 (410)
T ss_dssp EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCCEEETT-SSCEEE--C-CCCCSSCEEEEEECSSS
T ss_pred EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCC-CCceeE--E-EcCCCCCEEEEEEeCCC
Confidence 6788888776432211122222223455789999999865 457889976 443221 1 2211 122345556789
Q ss_pred cEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEe
Q 035640 202 GFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILL 278 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~y 278 (596)
+.++.|+.+ .++.+| ..++.- ... +... ...--.....++|++++.|+. ...+|
T Consensus 205 ~~l~s~s~D-~~i~~wd~~~~~~-----~~~-~~~h----------------~~~v~~~~~~~~g~~l~s~s~D~~v~vw 261 (410)
T 1vyh_C 205 DHIVSASRD-KTIKMWEVQTGYC-----VKT-FTGH----------------REWVRMVRPNQDGTLIASCSNDQTVRVW 261 (410)
T ss_dssp SEEEEEETT-SEEEEEETTTCCE-----EEE-EECC----------------SSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CEEEEEeCC-CeEEEEECCCCcE-----EEE-EeCC----------------CccEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 988888865 456666 433210 000 0000 000112234578999988875 46778
Q ss_pred cCCCCeEEEeeccccCCCCCCCCCceEE-ecccccc-------c--cccccCCCEEEEEcCccCCccccccccccccCCC
Q 035640 279 DPKANKVVREFPILTGGSRNYPASAMSV-LLPLKLR-------A--NNATATKAKVLVCGGAQWDSFYFSETKKQFFPAL 348 (596)
Q Consensus 279 Dp~t~~w~~~lp~mp~~~R~~p~~g~av-~lpl~~~-------~--~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~ 348 (596)
|..+......+.. ... .-.++ ..|-... + .......+.++++|+.+
T Consensus 262 d~~~~~~~~~~~~----h~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D----------------- 317 (410)
T 1vyh_C 262 VVATKECKAELRE----HRH---VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD----------------- 317 (410)
T ss_dssp ETTTCCEEEEECC----CSS---CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----------------
T ss_pred ECCCCceeeEecC----CCc---eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC-----------------
Confidence 8887765433311 110 00011 1110000 0 00000136677777754
Q ss_pred CceEEEEeeCCCCceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCC
Q 035640 349 QDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAG 427 (596)
Q Consensus 349 ~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~ 427 (596)
.++..+|+. +.+-... .-....... ...-|+|+.++.||.+ + ++.+||..+. +....+...
T Consensus 318 ~~i~iwd~~--~~~~~~~~~~h~~~v~~-v~~~~~g~~l~s~s~D-~------------~i~vwd~~~~--~~~~~~~~h 379 (410)
T 1vyh_C 318 KTIKMWDVS--TGMCLMTLVGHDNWVRG-VLFHSGGKFILSCADD-K------------TLRVWDYKNK--RCMKTLNAH 379 (410)
T ss_dssp SEEEEEETT--TTEEEEEEECCSSCEEE-EEECSSSSCEEEEETT-T------------EEEEECCTTS--CCCEEEECC
T ss_pred CeEEEEECC--CCceEEEEECCCCcEEE-EEEcCCCCEEEEEeCC-C------------eEEEEECCCC--ceEEEEcCC
Confidence 234455654 2211111 111122222 2446899999988864 1 5789998665 122332211
Q ss_pred CcccccceEEEEcCCCcEEEecCCCC
Q 035640 428 TIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 428 ~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
...-.+...-|||..+++||...
T Consensus 380 ---~~~v~~l~~~~~~~~l~sgs~D~ 402 (410)
T 1vyh_C 380 ---EHFVTSLDFHKTAPYVVTGSVDQ 402 (410)
T ss_dssp ---SSCEEEEEECSSSSCEEEEETTS
T ss_pred ---CCcEEEEEEcCCCCEEEEEeCCC
Confidence 11122344568999999988643
No 32
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.21 E-value=0.025 Score=57.16 Aligned_cols=93 Identities=13% Similarity=-0.064 Sum_probs=51.4
Q ss_pred eEEEEeCCCCCEEeCcCCCccc-cccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEcc
Q 035640 122 HSVLFDFETSELTALKLQTDTW-CSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLP 199 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~f-c~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~ 199 (596)
....+|+.+++++.+....... -...++.+||++|+++... ....+.+||.. +.++..+.. +. ....-...+.-+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~-~~~~v~~~~~~-~g~~~~~~~-~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED-DEGGIAAWQID-GQTAHKLNT-VVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET-TEEEEEEEEEE-TTEEEEEEE-EEEESCCCSEEEEET
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC-CCceEEEEEec-CCcEEEeee-eecCCCCCEEEEECC
Confidence 4667788888887654221111 1223456799977765321 23578889886 666554432 11 111222455667
Q ss_pred CCcEEEEcCCCCCcEEEe
Q 035640 200 DGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 200 dG~VyViGG~~~~~~E~y 217 (596)
||+.+++.+.....+.+|
T Consensus 96 dg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp TTTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCCEEEEE
Confidence 898555554444556666
No 33
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.12 E-value=0.17 Score=51.69 Aligned_cols=250 Identities=15% Similarity=0.144 Sum_probs=123.9
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCcee---ecCcCCCC-cccccEEEE
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWR---EYPTALAD-PRWYSTQVT 197 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~---~~~~~M~~-~R~y~s~~~ 197 (596)
.+.+||..+.+....-..+..+-....+.++|..+++||.+ ..+.+|+.. ...-. .....+.. ...-.++..
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~-~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLT-FDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECC-CCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEe-ccccccccccceeeeccCCcEEEEEE
Confidence 36788877766543322222222234567899999999975 568888764 22100 00000110 111123344
Q ss_pred ccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcC--CCcEEEEecc-
Q 035640 198 LPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSP--DGNLFIFSNN- 273 (596)
Q Consensus 198 L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~--dG~Ifv~Gg~- 273 (596)
.++++.++.|+.+ .++.+| ..+.+. ...+.... .... .....+ +|++++.|+.
T Consensus 163 ~~~~~~l~t~s~D-~~v~lwd~~~~~~------~~~~~~h~---------------~~v~-~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 163 TNSDMQILTASGD-GTCALWDVESGQL------LQSFHGHG---------------ADVL-CLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp CSSSSEEEEEETT-SEEEEEETTTCCE------EEEEECCS---------------SCEE-EEEECCCSSCCEEEEEETT
T ss_pred eCCCCEEEEEeCC-CcEEEEeCCCCeE------EEEEcCCC---------------CCeE-EEEEEeCCCCCEEEEEeCC
Confidence 5577777777654 456676 443311 00010000 0000 111223 5788888875
Q ss_pred -eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceE
Q 035640 274 -RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCG 352 (596)
Q Consensus 274 -~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 352 (596)
...+||..+.+....+. . ... .-.++.+ ..+++.+++|+.+ .++.
T Consensus 220 g~v~~wd~~~~~~~~~~~---~-h~~---~v~~v~~----------~p~~~~l~s~s~D-----------------~~v~ 265 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFE---T-HES---DVNSVRY----------YPSGDAFASGSDD-----------------ATCR 265 (354)
T ss_dssp SCEEEEETTTCCEEEEEC---C-CSS---CEEEEEE----------CTTSSEEEEEETT-----------------SCEE
T ss_pred CeEEEEECCCCcEEEEec---C-CCC---CeEEEEE----------eCCCCEEEEEeCC-----------------CeEE
Confidence 46789998877554331 1 111 1112211 1256778888754 2344
Q ss_pred EEEeeCCCCceEee-cCCCCcccc-ceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcc
Q 035640 353 RIDITKPNAVWKKE-RMPSPRVMG-DMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIP 430 (596)
Q Consensus 353 ~id~~~~~~~W~~~-~M~~~R~~~-~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~ 430 (596)
.+|+. ..+-... .-....... ....-|+|+++++|+.+. ++.+||..+. +.-..+. ..
T Consensus 266 lwd~~--~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~-------------~i~vwd~~~~--~~~~~l~---~h 325 (354)
T 2pbi_B 266 LYDLR--ADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY-------------TINVWDVLKG--SRVSILF---GH 325 (354)
T ss_dssp EEETT--TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-------------CEEEEETTTC--SEEEEEC---CC
T ss_pred EEECC--CCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC-------------cEEEEECCCC--ceEEEEE---CC
Confidence 56654 2211111 111111111 223458999999987641 5789998665 1222221 11
Q ss_pred cccceEEEEcCCCcEEEecCCC
Q 035640 431 RMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 431 R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
...-.+...-|||+.+++|+..
T Consensus 326 ~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 326 ENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp SSCEEEEEECTTSSCEEEEETT
T ss_pred CCcEEEEEECCCCCEEEEEcCC
Confidence 1222344567999999999864
No 34
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.10 E-value=0.18 Score=51.44 Aligned_cols=231 Identities=16% Similarity=0.181 Sum_probs=119.5
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEeC-CCCCCCCCc
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYIP-PEGQSNKSP 227 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~yP-~~~~w~~~~ 227 (596)
+.+||+.+++||.+ ..+++||.. +.+....-. + ...+-.+++.-++|+.++.||.++ .+.+|+ ..+.-..
T Consensus 72 ~s~d~~~l~s~s~D---g~v~vWd~~-~~~~~~~~~-~-~~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~~~~-- 142 (354)
T 2pbi_B 72 WCKDKRRIVSSSQD---GKVIVWDSF-TTNKEHAVT-M-PCTWVMACAYAPSGCAIACGGLDN-KCSVYPLTFDKNEN-- 142 (354)
T ss_dssp ECTTSSEEEEEETT---SEEEEEETT-TCCEEEEEE-C-SSSCCCEEEECTTSSEEEEESTTS-EEEEEECCCCTTCC--
T ss_pred ECCCCCEEEEEeCC---CeEEEEECC-CCCcceEEe-c-CCCCEEEEEECCCCCEEEEeeCCC-CEEEEEEecccccc--
Confidence 34688999999865 579999976 444322111 2 123445667778999999999764 455662 2110000
Q ss_pred ccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEecCCCCeEEEeeccccCCCCCCCCCceE
Q 035640 228 VFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILLDPKANKVVREFPILTGGSRNYPASAMS 305 (596)
Q Consensus 228 ~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~a 305 (596)
..... .. +......--.+...++++.++.|+. ...+||..+++..+.+ .+ .. ...
T Consensus 143 -~~~~~-~~------------~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~---~~-h~-----~~v 199 (354)
T 2pbi_B 143 -MAAKK-KS------------VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF---HG-HG-----ADV 199 (354)
T ss_dssp -SGGGC-EE------------EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE---EC-CS-----SCE
T ss_pred -ccccc-ee------------eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE---cC-CC-----CCe
Confidence 00000 00 0000000011233467776666654 4678999887754333 21 11 111
Q ss_pred EeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCe
Q 035640 306 VLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTED 384 (596)
Q Consensus 306 v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~ 384 (596)
..+.+.+ ..+++.+++|+.+ ..+..+|+. +.+.... ......... ....|+|+
T Consensus 200 ~~~~~~~------~~~g~~l~sgs~D-----------------g~v~~wd~~--~~~~~~~~~~h~~~v~~-v~~~p~~~ 253 (354)
T 2pbi_B 200 LCLDLAP------SETGNTFVSGGCD-----------------KKAMVWDMR--SGQCVQAFETHESDVNS-VRYYPSGD 253 (354)
T ss_dssp EEEEECC------CSSCCEEEEEETT-----------------SCEEEEETT--TCCEEEEECCCSSCEEE-EEECTTSS
T ss_pred EEEEEEe------CCCCCEEEEEeCC-----------------CeEEEEECC--CCcEEEEecCCCCCeEE-EEEeCCCC
Confidence 1111111 1256788888765 234456654 3332222 222222222 34468999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 385 ILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 385 V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
.++.|+.+. ++.+||..++ +-...-..............-|||+.+++|+...
T Consensus 254 ~l~s~s~D~-------------~v~lwd~~~~---~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 254 AFASGSDDA-------------TCRLYDLRAD---REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY 306 (354)
T ss_dssp EEEEEETTS-------------CEEEEETTTT---EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEeCCC-------------eEEEEECCCC---cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC
Confidence 999998651 5689998876 3222111111111223455678999999998643
No 35
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.09 E-value=0.1 Score=54.06 Aligned_cols=252 Identities=12% Similarity=0.092 Sum_probs=128.7
Q ss_pred eEEEEeCCCCCEEeCcCC-CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccC
Q 035640 122 HSVLFDFETSELTALKLQ-TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPD 200 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~-~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~d 200 (596)
...+||..+++....... +..........+||+++++|+.+ ..+++||.. +.+.... +............ +
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~---~~~~~~~v~~~~~-~ 185 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVE-SQTKLRT---MAGHQARVGCLSW-N 185 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT-TCCEEEE---ECCCSSCEEEEEE-E
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECc-CCeEEEE---ecCCCCceEEEEE-C
Confidence 367888888776554322 22222234456799999998764 468999986 5543221 3222222333444 7
Q ss_pred CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEE
Q 035640 201 GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSIL 277 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~ 277 (596)
+++++.|+.++ .+.+| .....- .... +.... ..--.....++|++++.|+. ...+
T Consensus 186 ~~~l~~~~~dg-~i~i~d~~~~~~----~~~~-~~~~~----------------~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 186 RHVLSSGSRSG-AIHHHDVRIANH----QIGT-LQGHS----------------SEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp TTEEEEEETTS-EEEEEETTSSSC----EEEE-EECCS----------------SCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCEEEEEcCCC-CEEEEecccCcc----eeeE-EcCCC----------------CCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 88888888654 45565 332110 0000 00000 00011234568999998875 4678
Q ss_pred ecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEee
Q 035640 278 LDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDIT 357 (596)
Q Consensus 278 yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~ 357 (596)
||..+.+-...+..- .. +.. .....| ....++++||... ...+..+|+.
T Consensus 244 wd~~~~~~~~~~~~~----~~-~v~-~~~~~p----------~~~~ll~~~~gs~---------------d~~i~i~d~~ 292 (401)
T 4aez_A 244 WDARSSIPKFTKTNH----NA-AVK-AVAWCP----------WQSNLLATGGGTM---------------DKQIHFWNAA 292 (401)
T ss_dssp EETTCSSEEEEECCC----SS-CCC-EEEECT----------TSTTEEEEECCTT---------------TCEEEEEETT
T ss_pred ccCCCCCccEEecCC----cc-eEE-EEEECC----------CCCCEEEEecCCC---------------CCEEEEEECC
Confidence 998876644333211 11 011 111211 2456777775210 1234556654
Q ss_pred CCCCceEeecCCCCccccceEEeCCCeEEEEc-CCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceE
Q 035640 358 KPNAVWKKERMPSPRVMGDMVILPTEDILLLN-GAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSS 436 (596)
Q Consensus 358 ~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvG-G~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~ 436 (596)
+.+-.. .+.....-.+....++|+.+++. |...| .+.+||..+. +......+......-..
T Consensus 293 --~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~g~~dg------------~i~v~~~~~~---~~~~~~~~~~h~~~v~~ 354 (401)
T 4aez_A 293 --TGARVN-TVDAGSQVTSLIWSPHSKEIMSTHGFPDN------------NLSIWSYSSS---GLTKQVDIPAHDTRVLY 354 (401)
T ss_dssp --TCCEEE-EEECSSCEEEEEECSSSSEEEEEECTTTC------------EEEEEEEETT---EEEEEEEEECCSSCCCE
T ss_pred --CCCEEE-EEeCCCcEEEEEECCCCCeEEEEeecCCC------------cEEEEecCCc---cceeEEEecCCCCCEEE
Confidence 222111 11111112223456899988873 32211 5789998876 56544332222222223
Q ss_pred EEEcCCCcEEEecCCC
Q 035640 437 SVLLPDGTVLVAGSNT 452 (596)
Q Consensus 437 a~LlpDG~Vlv~GG~~ 452 (596)
..+-|||+.+++||..
T Consensus 355 ~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 355 SALSPDGRILSTAASD 370 (401)
T ss_dssp EEECTTSSEEEEECTT
T ss_pred EEECCCCCEEEEEeCC
Confidence 4567999999998864
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.08 E-value=0.21 Score=50.85 Aligned_cols=243 Identities=16% Similarity=0.171 Sum_probs=120.0
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcE-EEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDL-VSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDG 201 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~i-lv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG 201 (596)
..+||..+++....-..+.. ..+..+.+||+. +++|+.+ ..+++||.. +.+.... +.....-.+++.-+||
T Consensus 14 v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~-~~~~~~~---~~~~~~v~~~~~spdg 85 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHS---NDVSIIDTA-TNNVIAT---VPAGSSPQGVAVSPDG 85 (391)
T ss_dssp EEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGG---TEEEEEETT-TTEEEEE---EECSSSEEEEEECTTS
T ss_pred EEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCC---CeEEEEECC-CCeEEEE---EECCCCccceEECCCC
Confidence 56677766654432111111 122345678875 4665432 579999987 6654332 2223333345566788
Q ss_pred cEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccce-EEEcCCCc-EEEEec--ceeE
Q 035640 202 GFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF-VYLSPDGN-LFIFSN--NRSI 276 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~~~~dG~-Ifv~Gg--~~~e 276 (596)
+.++++|.....+.+| ..+++. ...+.. .-.+. ....++|+ ||+.+. ....
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~~------~~~~~~------------------~~~~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNTV------AGTVKT------------------GKSPLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEE------EEEEEC------------------SSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CEEEEEECCCCEEEEEECCCCeE------EEEEeC------------------CCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 8665555555567777 544311 111100 00122 23457887 556665 3577
Q ss_pred EecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEe
Q 035640 277 LLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDI 356 (596)
Q Consensus 277 ~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~ 356 (596)
+||..+++....+. .. . .+ ..+.+ .| ....|++.++.+ ..+..+|+
T Consensus 142 ~~d~~~~~~~~~~~---~~-~-~~---~~~~~--~~-------dg~~l~~~~~~~-----------------~~v~~~d~ 187 (391)
T 1l0q_A 142 VINTVTKAVINTVS---VG-R-SP---KGIAV--TP-------DGTKVYVANFDS-----------------MSISVIDT 187 (391)
T ss_dssp EEETTTTEEEEEEE---CC-S-SE---EEEEE--CT-------TSSEEEEEETTT-----------------TEEEEEET
T ss_pred EEECCCCcEEEEEe---cC-C-Cc---ceEEE--CC-------CCCEEEEEeCCC-----------------CEEEEEEC
Confidence 89998887654332 11 1 11 12211 11 234566766533 23556776
Q ss_pred eCCCCceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccce
Q 035640 357 TKPNAVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHS 435 (596)
Q Consensus 357 ~~~~~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs 435 (596)
. +.+.... ... ... .+....|||+.+++++.... -..+.+||..+. +-... +.... ...
T Consensus 188 ~--~~~~~~~~~~~-~~~-~~~~~~~~g~~l~~~~~~~~----------~~~v~~~d~~~~---~~~~~--~~~~~-~~~ 247 (391)
T 1l0q_A 188 V--TNSVIDTVKVE-AAP-SGIAVNPEGTKAYVTNVDKY----------FNTVSMIDTGTN---KITAR--IPVGP-DPA 247 (391)
T ss_dssp T--TTEEEEEEECS-SEE-EEEEECTTSSEEEEEEECSS----------CCEEEEEETTTT---EEEEE--EECCS-SEE
T ss_pred C--CCeEEEEEecC-CCc-cceEECCCCCEEEEEecCcC----------CCcEEEEECCCC---eEEEE--EecCC-Ccc
Confidence 4 3332222 221 112 22345689987777664210 125789998876 43221 11111 122
Q ss_pred EEEEcCCCc-EEEecCC
Q 035640 436 SSVLLPDGT-VLVAGSN 451 (596)
Q Consensus 436 ~a~LlpDG~-Vlv~GG~ 451 (596)
...+-|||+ +|++++.
T Consensus 248 ~~~~s~dg~~l~~s~~~ 264 (391)
T 1l0q_A 248 GIAVTPDGKKVYVALSF 264 (391)
T ss_dssp EEEECTTSSEEEEEETT
T ss_pred EEEEccCCCEEEEEcCC
Confidence 345678997 5466654
No 37
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.02 E-value=0.099 Score=52.02 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=51.3
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccCC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPDG 201 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~dG 201 (596)
+.+||..+.+....-..+........+.++++++++|+.+ ..+++||.. +.+-.. . +. ....-.+++.-+++
T Consensus 37 v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~-~~~~~~--~-~~~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 37 VELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN-TGEKVV--D-FEAHPDYIRSIAVHPTK 109 (304)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT-TCCEEE--E-EECCSSCEEEEEECSSS
T ss_pred EEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECC-CCcEEE--E-EeCCCCcEEEEEEcCCC
Confidence 6778887765332111122222234567799999999864 579999987 543221 1 21 12223345566789
Q ss_pred cEEEEcCCCCCcEEEe
Q 035640 202 GFIVVGGRGAFSYEYI 217 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y 217 (596)
+.++.|+.++ ++.+|
T Consensus 110 ~~l~sgs~D~-~v~lW 124 (304)
T 2ynn_A 110 PYVLSGSDDL-TVKLW 124 (304)
T ss_dssp SEEEEEETTS-CEEEE
T ss_pred CEEEEECCCC-eEEEE
Confidence 9888888654 46666
No 38
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.96 E-value=0.19 Score=49.79 Aligned_cols=91 Identities=15% Similarity=0.054 Sum_probs=50.0
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCce-eecCcCCCCcccccE-EEEc
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGD-LVSTGGFGGGANTVRYLSTCDGCDW-REYPTALADPRWYST-QVTL 198 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~-ilv~GG~~~g~~~v~~fdP~~t~~W-~~~~~~M~~~R~y~s-~~~L 198 (596)
...+||+.+++............ ..++.+||+ +++++.. ...+.+||+. +.+. ... +........ .+.-
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~-~~~~~~~~---~~~~~~~~~~~~~s 92 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ-LEPPKVVA---IQEGQSSMADVDIT 92 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS-SSSCEEEE---EEECSSCCCCEEEC
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC-CCceeEEe---cccCCCCccceEEC
Confidence 36788998888765432222112 445667887 5555542 2479999987 5553 211 111111122 5566
Q ss_pred cCCcEEEEcCCCCC--cEEEe-CCC
Q 035640 199 PDGGFIVVGGRGAF--SYEYI-PPE 220 (596)
Q Consensus 199 ~dG~VyViGG~~~~--~~E~y-P~~ 220 (596)
+||+.++++...+. .+.+| ..+
T Consensus 93 ~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 93 PDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp TTSSEEEECCCSSSSCEEEEEETTT
T ss_pred CCCCEEEEecCCCCcccEEEEECCC
Confidence 78875555443333 67777 443
No 39
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.93 E-value=0.21 Score=50.58 Aligned_cols=215 Identities=11% Similarity=-0.004 Sum_probs=111.9
Q ss_pred CCeEEEEeCCCCCceeecC----cCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCccccccc
Q 035640 165 ANTVRYLSTCDGCDWREYP----TALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTND 239 (596)
Q Consensus 165 ~~~v~~fdP~~t~~W~~~~----~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~ 239 (596)
..++.+|||. +.++...- +....+..-... ++.++++|++... ...+.++ +++.+-. ..++.
T Consensus 16 ~~~l~~~d~~-t~~~~~~i~~~~n~~~lg~~~~~i-~~~~~~lyv~~~~-~~~v~viD~~t~~~~---~~i~~------- 82 (328)
T 3dsm_A 16 NATLSYYDPA-TCEVENEVFYRANGFKLGDVAQSM-VIRDGIGWIVVNN-SHVIFAIDINTFKEV---GRITG------- 82 (328)
T ss_dssp CBEEEEEETT-TTEEECSHHHHHHSSCCBSCEEEE-EEETTEEEEEEGG-GTEEEEEETTTCCEE---EEEEC-------
T ss_pred CceEEEEECC-CCEEhhhhHhhhcCcccCccceEE-EEECCEEEEEEcC-CCEEEEEECcccEEE---EEcCC-------
Confidence 4689999998 77765321 011222222233 4458899998753 3456777 6554210 00110
Q ss_pred CCCcCCcceeeeccCccceEEEc-CCCcEEEEe--cceeEEecCCCCeEEEeeccccCC--CCCCCCCceEEeccccccc
Q 035640 240 LKGIDGQEMFLIENNLYPFVYLS-PDGNLFIFS--NNRSILLDPKANKVVREFPILTGG--SRNYPASAMSVLLPLKLRA 314 (596)
Q Consensus 240 ~~g~~~~~~~~~~~~~yp~~~~~-~dG~Ifv~G--g~~~e~yDp~t~~w~~~lp~mp~~--~R~~p~~g~av~lpl~~~~ 314 (596)
...|+..+. ++|++|+.. +....++|+.+++....++. ... ....|. +.++
T Consensus 83 --------------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~-g~~~~~~~~p~-~i~~-------- 138 (328)
T 3dsm_A 83 --------------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC-PDMDMESGSTE-QMVQ-------- 138 (328)
T ss_dssp --------------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC-TTCCTTTCBCC-CEEE--------
T ss_pred --------------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc-CCccccCCCcc-eEEE--------
Confidence 123566666 899999987 45678899999886544431 110 001222 2222
Q ss_pred cccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cC-CCCccccceEEeCCCeEEEEcCCC
Q 035640 315 NNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RM-PSPRVMGDMVILPTEDILLLNGAK 392 (596)
Q Consensus 315 ~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M-~~~R~~~~avvLpdG~V~vvGG~~ 392 (596)
.++++|+..-.. .+.+.+||+. +.+.... +. ..+ ....+-+||++|++.-..
T Consensus 139 -----~~~~lyv~~~~~----------------~~~v~viD~~--t~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 139 -----YGKYVYVNCWSY----------------QNRILKIDTE--TDKVVDELTIGIQP---TSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp -----ETTEEEEEECTT----------------CCEEEEEETT--TTEEEEEEECSSCB---CCCEECTTSEEEEEBCCB
T ss_pred -----ECCEEEEEcCCC----------------CCEEEEEECC--CCeEEEEEEcCCCc---cceEEcCCCCEEEEECCC
Confidence 378899874210 1356678875 4444332 32 122 234556899999986432
Q ss_pred CCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCC-cEEEec
Q 035640 393 TGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDG-TVLVAG 449 (596)
Q Consensus 393 ~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG-~Vlv~G 449 (596)
.....|.. ....+.++|+++. +....-..+....-++ ..+-||| ++|++.
T Consensus 193 ~~~~~~~~---~~~~v~~id~~t~---~v~~~~~~~~g~~p~~-la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 193 YEGSPYGY---EAPSLYRIDAETF---TVEKQFKFKLGDWPSE-VQLNGTRDTLYWIN 243 (328)
T ss_dssp CTTCSSCB---CCCEEEEEETTTT---EEEEEEECCTTCCCEE-EEECTTSCEEEEES
T ss_pred ccCCcccc---CCceEEEEECCCC---eEEEEEecCCCCCcee-EEEecCCCEEEEEc
Confidence 11000100 0136789999998 6543222222221122 3345655 456653
No 40
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.92 E-value=0.33 Score=47.01 Aligned_cols=241 Identities=17% Similarity=0.155 Sum_probs=119.2
Q ss_pred EEEEeCCCCCEEeCcCCCc-cccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-cccccEEEEccC
Q 035640 123 SVLFDFETSELTALKLQTD-TWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-PRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~-~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-~R~y~s~~~L~d 200 (596)
...||+. ++++....... ....+.+...+|++++.... ...+.+||+. .++.... ++. ...-.+.+.-++
T Consensus 43 v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~--g~~~~~~--~~~~~~~~~~i~~~~~ 114 (300)
T 2qc5_A 43 ISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK--GGFTEYP--LPQPDSGPYGITEGLN 114 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECST
T ss_pred EEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC--CCeEEec--CCCCCCCCccceECCC
Confidence 5677877 66665432211 12223344578999997542 2568899986 4444331 221 122234455568
Q ss_pred CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEE-cCCCcEEEEe--cceeE
Q 035640 201 GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYL-SPDGNLFIFS--NNRSI 276 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~-~~dG~Ifv~G--g~~~e 276 (596)
|++|+..... ..+..+ +. ++.. ..... . ....|...+ -++|+||+.. +....
T Consensus 115 g~l~v~~~~~-~~i~~~~~~-g~~~----~~~~~-~-----------------~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 115 GDIWFTQLNG-DRIGKLTAD-GTIY----EYDLP-N-----------------KGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp TCEEEEETTT-TEEEEECTT-SCEE----EEECS-S-----------------TTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEEccCC-CeEEEECCC-CCEE----EccCC-C-----------------CCCCceeEEECCCCCEEEEecCCCeEE
Confidence 9999875432 234445 43 3211 01100 0 011344444 3789999876 34678
Q ss_pred EecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEe
Q 035640 277 LLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDI 356 (596)
Q Consensus 277 ~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~ 356 (596)
+||+ +++.. .+. ++. ....| ..+.+ ..+++||++.... ..+.++|+
T Consensus 171 ~~~~-~g~~~-~~~-~~~-~~~~~---~~i~~----------d~~g~l~v~~~~~-----------------~~i~~~~~ 216 (300)
T 2qc5_A 171 RITN-TGKLE-EYP-LPT-NAAAP---VGITS----------GNDGALWFVEIMG-----------------NKIGRITT 216 (300)
T ss_dssp EECT-TCCEE-EEE-CSS-TTCCE---EEEEE----------CTTSSEEEEETTT-----------------TEEEEECT
T ss_pred EECC-CCcEE-Eee-CCC-CCCCc---ceEEE----------CCCCCEEEEccCC-----------------CEEEEEcC
Confidence 8998 55554 232 221 11111 12211 1367788864321 23455654
Q ss_pred eCCCCceEeecCCCCccc-cceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccce
Q 035640 357 TKPNAVWKKERMPSPRVM-GDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHS 435 (596)
Q Consensus 357 ~~~~~~W~~~~M~~~R~~-~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs 435 (596)
+.++....++..-.. .+.++-++|+||+..-.. ..+.+||+ +. ++....-......-++
T Consensus 217 ---~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-------------~~i~~~~~-~g---~~~~~~~~~~~~~~~~ 276 (300)
T 2qc5_A 217 ---TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA-------------NQIGRITN-DN---TIQEYQLQTENAEPHG 276 (300)
T ss_dssp ---TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-------------TEEEEECT-TS---CEEEEECCSTTCCCCC
T ss_pred ---CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC-------------CeEEEECC-CC---cEEEEECCccCCccce
Confidence 233333222211111 223445789999876321 14678998 44 5544321111111223
Q ss_pred EEEEcCCCcEEEecC
Q 035640 436 SSVLLPDGTVLVAGS 450 (596)
Q Consensus 436 ~a~LlpDG~Vlv~GG 450 (596)
. .+.+||++|++..
T Consensus 277 i-~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 277 I-TFGKDGSVWFALK 290 (300)
T ss_dssp E-EECTTSCEEEECS
T ss_pred e-EeCCCCCEEEEcc
Confidence 3 4568999999865
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.91 E-value=0.26 Score=51.65 Aligned_cols=90 Identities=10% Similarity=0.145 Sum_probs=51.2
Q ss_pred EEEEeCCCCCEEeCcCC--CccccccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEcc
Q 035640 123 SVLFDFETSELTALKLQ--TDTWCSSGGLTA-DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLP 199 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~--~~~fc~~~~~l~-dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~ 199 (596)
+.+||..+++...+... +........+.+ |+.++++|+.+ ..++++|.. +.........-...-+..+...-+
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---GTTRLQDFK-GNILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS---SCEEEEETT-SCEEEEEECCSSCSCCCCCEEEET
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CEEEEeecc-CCceeEEeccCCCCccEEEEEECC
Confidence 67888877654322111 211111223343 78899998865 468999986 554433221112223444556667
Q ss_pred CCcEEEEcCCCCCcEEEe
Q 035640 200 DGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 200 dG~VyViGG~~~~~~E~y 217 (596)
||++++.|+.++ .+.+|
T Consensus 220 ~~~~l~~g~~dg-~i~~w 236 (435)
T 4e54_B 220 SSRMVVTGDNVG-NVILL 236 (435)
T ss_dssp TTTEEEEECSSS-BEEEE
T ss_pred CCCEEEEEeCCC-cEeee
Confidence 999999998764 45566
No 42
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.89 E-value=0.37 Score=49.40 Aligned_cols=88 Identities=6% Similarity=-0.015 Sum_probs=52.6
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-cccccEEEEccC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-PRWYSTQVTLPD 200 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-~R~y~s~~~L~d 200 (596)
...+||..+++....-..+........+.++|+++++|+.+ ..+++||.. +.+-.. .+.. ...-.+++..+|
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~-~~~~~~---~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVK-DGSNPR---TLIGHRATVTDIAIIDR 192 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCCCE---EEECCSSCEEEEEEETT
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCcCce---EEcCCCCcEEEEEEcCC
Confidence 36788888776554432333333334566799999998864 579999976 432111 1221 122234555678
Q ss_pred CcEEEEcCCCCCcEEEe
Q 035640 201 GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y 217 (596)
|+.++.|+.++ .+.+|
T Consensus 193 ~~~l~s~~~d~-~v~iw 208 (420)
T 3vl1_A 193 GRNVLSASLDG-TIRLW 208 (420)
T ss_dssp TTEEEEEETTS-CEEEE
T ss_pred CCEEEEEcCCC-cEEEe
Confidence 99888888654 35555
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.86 E-value=0.13 Score=52.81 Aligned_cols=235 Identities=10% Similarity=0.048 Sum_probs=116.5
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKS 226 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~ 226 (596)
.-++|+++++|+.+ ..+++||.. +.+-... +. ....-.+.+..+||+.++.|+.++ .+.+| ..+.+-.
T Consensus 105 ~~~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~s~d~-~i~iwd~~~~~~~-- 174 (420)
T 3vl1_A 105 AKLQMRRFILGTTE---GDIKVLDSN-FNLQREI---DQAHVSEITKLKFFPSGEALISSSQDM-QLKIWSVKDGSNP-- 174 (420)
T ss_dssp ECSSSCEEEEEETT---SCEEEECTT-SCEEEEE---TTSSSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTCCCC--
T ss_pred EecCCCEEEEEECC---CCEEEEeCC-Ccceeee---cccccCccEEEEECCCCCEEEEEeCCC-eEEEEeCCCCcCc--
Confidence 45689999998764 468999976 5443222 21 122223455567899888887653 56666 4332110
Q ss_pred cccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEecCCCCeEEEeeccccCCCCCCCCCce
Q 035640 227 PVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILLDPKANKVVREFPILTGGSRNYPASAM 304 (596)
Q Consensus 227 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~ 304 (596)
.. +.... .... .+...++|+.++.|+.+ ..+||..+++-...+..-.. ... + ...
T Consensus 175 ---~~-~~~h~---------------~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~-~-v~~ 231 (420)
T 3vl1_A 175 ---RT-LIGHR---------------ATVT-DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN-PHD-G-VNS 231 (420)
T ss_dssp ---EE-EECCS---------------SCEE-EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTB-TTC-C-EEE
T ss_pred ---eE-EcCCC---------------CcEE-EEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCC-CCC-C-ccE
Confidence 00 10000 0000 12345789988888753 67899988775543321110 000 0 000
Q ss_pred EEecccc----------ccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCcc
Q 035640 305 SVLLPLK----------LRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRV 373 (596)
Q Consensus 305 av~lpl~----------~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~ 373 (596)
..+.+-. +-.......+++.+++|+.+ ..+..+|+. +.+-... .......
T Consensus 232 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------------g~i~i~d~~--~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 232 IALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS-----------------GVITVHNVF--SKEQTIQLPSKFTCS 292 (420)
T ss_dssp EEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT-----------------SCEEEEETT--TCCEEEEECCTTSSC
T ss_pred EEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC-----------------CeEEEEECC--CCceeEEcccccCCC
Confidence 0000000 00000012367888888754 234566665 2221111 2111111
Q ss_pred ccceEEeCCCe-EEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCC
Q 035640 374 MGDMVILPTED-ILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 374 ~~~avvLpdG~-V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
-.+....|+|+ ++++|+.+ | .+.+||..+..- .-..+... ....-.++..+||+.+++||..
T Consensus 293 v~~~~~~~~~~~~l~~g~~d-g------------~i~vwd~~~~~~-~~~~~~~~---~~~~v~~~~~~~~~~l~s~~~d 355 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYEN-G------------MLAQWDLRSPEC-PVGEFLIN---EGTPINNVYFAAGALFVSSGFD 355 (420)
T ss_dssp EEEEEECSSCTTEEEEEETT-S------------EEEEEETTCTTS-CSEEEEES---TTSCEEEEEEETTEEEEEETTT
T ss_pred ceeEEEeCCCCCEEEEEeCC-C------------eEEEEEcCCCcC-chhhhhcc---CCCCceEEEeCCCCEEEEecCC
Confidence 12234578898 88888764 1 578999887611 01122111 1111233455799999998754
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.11 Score=53.08 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=28.1
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCD 178 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~ 178 (596)
..+||........+.. +........+.++|+.+++|+.+ ..+.+||.. +.+
T Consensus 132 i~i~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~-~~~ 182 (425)
T 1r5m_A 132 LRLWNKTGALLNVLNF-HRAPIVSVKWNKDGTHIISMDVE---NVTILWNVI-SGT 182 (425)
T ss_dssp EEEEETTSCEEEEECC-CCSCEEEEEECTTSSEEEEEETT---CCEEEEETT-TTE
T ss_pred EEEEeCCCCeeeeccC-CCccEEEEEECCCCCEEEEEecC---CeEEEEECC-CCc
Confidence 5677743333333321 22222223456789988888764 457888876 443
No 45
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.78 E-value=0.58 Score=47.73 Aligned_cols=128 Identities=12% Similarity=0.195 Sum_probs=68.3
Q ss_pred cCCCcEEEEec-ceeEEecCCCCe--EEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccc
Q 035640 262 SPDGNLFIFSN-NRSILLDPKANK--VVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFS 338 (596)
Q Consensus 262 ~~dG~Ifv~Gg-~~~e~yDp~t~~--w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 338 (596)
+.+|.||+.+. ....++|+.+++ |.. + .. . . ...++ .+++||+....
T Consensus 237 ~~~~~v~~~~~~g~l~~~d~~tG~~~w~~--~-~~--~--~--~~~~~-------------~~~~l~~~~~~-------- 286 (376)
T 3q7m_A 237 VVNGVVFALAYNGNLTALDLRSGQIMWKR--E-LG--S--V--NDFIV-------------DGNRIYLVDQN-------- 286 (376)
T ss_dssp EETTEEEEECTTSCEEEEETTTCCEEEEE--C-CC--C--E--EEEEE-------------ETTEEEEEETT--------
T ss_pred EECCEEEEEecCcEEEEEECCCCcEEeec--c-CC--C--C--CCceE-------------ECCEEEEEcCC--------
Confidence 34788888763 356789998765 432 1 11 0 0 11111 37788886431
Q ss_pred cccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCC
Q 035640 339 ETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSR 418 (596)
Q Consensus 339 ~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g 418 (596)
..+..+|+......|+...+... .... .++.+|+||+.... | .+.+||+++.+
T Consensus 287 ----------g~l~~~d~~tG~~~w~~~~~~~~-~~~~-~~~~~~~l~v~~~~--g------------~l~~~d~~tG~- 339 (376)
T 3q7m_A 287 ----------DRVMALTIDGGVTLWTQSDLLHR-LLTS-PVLYNGNLVVGDSE--G------------YLHWINVEDGR- 339 (376)
T ss_dssp ----------CCEEEEETTTCCEEEEECTTTTS-CCCC-CEEETTEEEEECTT--S------------EEEEEETTTCC-
T ss_pred ----------CeEEEEECCCCcEEEeecccCCC-cccC-CEEECCEEEEEeCC--C------------eEEEEECCCCc-
Confidence 13456777644456876533332 2232 34558888875321 1 46799998861
Q ss_pred CceEEecCCCcccccceEEEEcCCCcEEEecC
Q 035640 419 QRFKELAAGTIPRMYHSSSVLLPDGTVLVAGS 450 (596)
Q Consensus 419 ~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG 450 (596)
..|+.-. .......+.++ .+|+||+...
T Consensus 340 ~~~~~~~--~~~~~~~~~~~--~~~~l~v~~~ 367 (376)
T 3q7m_A 340 FVAQQKV--DSSGFQTEPVA--ADGKLLIQAK 367 (376)
T ss_dssp EEEEEEC--CTTCBCSCCEE--ETTEEEEEBT
T ss_pred EEEEEec--CCCcceeCCEE--ECCEEEEEeC
Confidence 1354322 11122222333 3899988754
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.77 E-value=0.31 Score=48.07 Aligned_cols=222 Identities=13% Similarity=0.195 Sum_probs=116.5
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-cccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-PRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKS 226 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~ 226 (596)
+.++|+.+++|+.+ ..+++||.. +.+.... +.. ...-.+.+..+||+.++.|+.++ .+.+| ..+++
T Consensus 31 ~s~~~~~l~s~~~d---g~i~iw~~~-~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d~-~i~vwd~~~~~---- 98 (312)
T 4ery_A 31 FSPNGEWLASSSAD---KLIKIWGAY-DGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDK-TLKIWDVSSGK---- 98 (312)
T ss_dssp ECTTSSEEEEEETT---SCEEEEETT-TCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTCC----
T ss_pred ECCCCCEEEEeeCC---CeEEEEeCC-Ccccchh---hccCCCceEEEEEcCCCCEEEEECCCC-EEEEEECCCCc----
Confidence 45688989998764 458899986 5554332 221 12223455567899999988653 46666 33321
Q ss_pred cccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEecCCCCeEEEeeccccCCCCCCCCCce
Q 035640 227 PVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILLDPKANKVVREFPILTGGSRNYPASAM 304 (596)
Q Consensus 227 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~ 304 (596)
....+.... ..--.....+++++++.|+.+ ..+||..+++-...+.. ... .-.
T Consensus 99 --~~~~~~~~~----------------~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~---~v~ 153 (312)
T 4ery_A 99 --CLKTLKGHS----------------NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA----HSD---PVS 153 (312)
T ss_dssp --EEEEEECCS----------------SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC----CSS---CEE
T ss_pred --EEEEEcCCC----------------CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC----CCC---cEE
Confidence 010010000 000012335788888888753 67899988765433321 110 111
Q ss_pred EEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee--cCCCCccccceEEeCC
Q 035640 305 SVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE--RMPSPRVMGDMVILPT 382 (596)
Q Consensus 305 av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~--~M~~~R~~~~avvLpd 382 (596)
++.+ ..+++.+++|+.+ ..+..+|+. +.+.... .-....... ...-|+
T Consensus 154 ~~~~----------~~~~~~l~~~~~d-----------------~~i~~wd~~--~~~~~~~~~~~~~~~~~~-~~~~~~ 203 (312)
T 4ery_A 154 AVHF----------NRDGSLIVSSSYD-----------------GLCRIWDTA--SGQCLKTLIDDDNPPVSF-VKFSPN 203 (312)
T ss_dssp EEEE----------CTTSSEEEEEETT-----------------SCEEEEETT--TCCEEEEECCSSCCCEEE-EEECTT
T ss_pred EEEE----------cCCCCEEEEEeCC-----------------CcEEEEECC--CCceeeEEeccCCCceEE-EEECCC
Confidence 2211 1367778888754 134456654 2222111 111111212 345689
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceE-EecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 383 EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFK-ELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 383 G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt-~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
|+.+++|+.+ + .+.+||..+. +-. .+................++|+.+++|+...
T Consensus 204 ~~~l~~~~~d-~------------~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 204 GKYILAATLD-N------------TLKLWDYSKG---KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp SSEEEEEETT-T------------EEEEEETTTT---EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred CCEEEEEcCC-C------------eEEEEECCCC---cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC
Confidence 9999988754 1 5789998776 322 2222222221122334457899999998754
No 47
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.75 E-value=0.37 Score=47.73 Aligned_cols=141 Identities=13% Similarity=0.075 Sum_probs=72.4
Q ss_pred eEEEEeCCCCCE-EeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccC
Q 035640 122 HSVLFDFETSEL-TALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPD 200 (596)
Q Consensus 122 ~~~~yDp~t~~w-~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~d 200 (596)
...+||+.+++. ..........+.+.++.+||+.++++....+...+.+||.. +.+.... +.........+.-+|
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~-~~~~~~~---~~~~~~~~~~~~spd 138 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL-KNKFIST---IPIPYDAVGIAISPN 138 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT-TTEEEEE---EECCTTEEEEEECTT
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC-CCCeEEE---EECCCCccceEECCC
Confidence 367889988875 22211122223324567889876655433222389999987 6654332 222222345667778
Q ss_pred Cc-EEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceE-EEcCCCc-EEEEec--ce
Q 035640 201 GG-FIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFV-YLSPDGN-LFIFSN--NR 274 (596)
Q Consensus 201 G~-VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~-~~~~dG~-Ifv~Gg--~~ 274 (596)
|+ +|+.+......+.+| -..+.- ..... . ... .....|.. ...+||+ ||+.+. ..
T Consensus 139 g~~l~~~~~~~~~~i~~~~~~~~g~---~~~~~-~-~~~--------------~~~~~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 139 GNGLILIDRSSANTVRRFKIDADGV---LFDTG-Q-EFI--------------SGGTRPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp SSCEEEEEETTTTEEEEEEECTTCC---EEEEE-E-EEE--------------CSSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred CCEEEEEecCCCceEEEEEECCCCc---EeecC-C-ccc--------------cCCCCccceEECCCCCEEEEEeCCCCe
Confidence 86 776654433325555 221100 00000 0 000 00112333 3457997 777763 35
Q ss_pred eEEecCCCCeE
Q 035640 275 SILLDPKANKV 285 (596)
Q Consensus 275 ~e~yDp~t~~w 285 (596)
..+||..+.+.
T Consensus 200 v~v~d~~~~~~ 210 (331)
T 3u4y_A 200 IGILETQNPEN 210 (331)
T ss_dssp EEEEECSSTTS
T ss_pred EEEEECCCCcc
Confidence 77899988775
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.72 E-value=0.026 Score=57.50 Aligned_cols=234 Identities=15% Similarity=0.140 Sum_probs=111.6
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcc-cccEEEEccCCcEEEEcCCCCCcEEEe-CCCCC-CC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPR-WYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQ-SN 224 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R-~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~-w~ 224 (596)
.+.+||+++++|+.+ ..+++||.. +..|..... +.... .-.+++..+||+.++.|+.++ .+.+| ...++ |.
T Consensus 18 ~~s~~g~~l~~~~~d---~~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~d~-~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 18 AFNSQRTEFVTTTAT---NQVELYEQD-GNGWKHART-FSDHDKIVTCVDWAPKSNRIVTCSQDR-NAYVYEKRPDGTWK 91 (377)
T ss_dssp EECSSSSEEECCCSS---SCBCEEEEE-TTEEEECCC-BCCCSSCEEEEEECTTTCCEEEEETTS-SEEEC------CCC
T ss_pred EECCCCCEEEEecCC---CEEEEEEcc-CCceEEEEE-EecCCceEEEEEEeCCCCEEEEEeCCC-eEEEEEcCCCCcee
Confidence 445689999998764 457888887 776766543 54322 223445566888888888654 45666 33332 21
Q ss_pred CCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEecCCCCe-EEEeeccccCCCCCCCC
Q 035640 225 KSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILLDPKANK-VVREFPILTGGSRNYPA 301 (596)
Q Consensus 225 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~yDp~t~~-w~~~lp~mp~~~R~~p~ 301 (596)
. ...+. ... . . --.+...++|++++.|+.+ ..+||..+++ |. .+..+......
T Consensus 92 ~---~~~~~-~~~--------~-------~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~h~~--- 147 (377)
T 3dwl_C 92 Q---TLVLL-RLN--------R-------A-ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW-VSKHLKRPLRS--- 147 (377)
T ss_dssp C---EEECC-CCS--------S-------C-EEEEECCTTSSCCEEEESSSCEEECCC-----CC-CCEEECSSCCS---
T ss_pred e---eeEec-ccC--------C-------c-eEEEEECCCCCEEEEEecCCeEEEEEECCcccce-eeeEeecccCC---
Confidence 1 00000 000 0 0 0012234688888888753 5678887764 21 11112210111
Q ss_pred CceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCC-------CCc-------eEee-
Q 035640 302 SAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKP-------NAV-------WKKE- 366 (596)
Q Consensus 302 ~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~-------~~~-------W~~~- 366 (596)
.-.++. .. .+++++++|+.+ ..+..+|+... ... -+..
T Consensus 148 ~v~~~~--~~--------~~~~~l~~~~~d-----------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T 3dwl_C 148 TILSLD--WH--------PNNVLLAAGCAD-----------------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA 200 (377)
T ss_dssp CEEEEE--EC--------TTSSEEEEEESS-----------------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE
T ss_pred CeEEEE--Ec--------CCCCEEEEEeCC-----------------CEEEEEEEEecccCCCccccccccccchhhhhh
Confidence 111111 11 256778888754 12344554310 011 1122
Q ss_pred cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEE
Q 035640 367 RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVL 446 (596)
Q Consensus 367 ~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vl 446 (596)
.+.....-.+....|||++++.|+.+ | ++.+||..+..- ....+..+......-......|||+++
T Consensus 201 ~~~~~~~v~~~~~sp~~~~l~~~~~d-~------------~i~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l 266 (377)
T 3dwl_C 201 EYPSGGWVHAVGFSPSGNALAYAGHD-S------------SVTIAYPSAPEQ-PPRALITVKLSQLPLRSLLWANESAIV 266 (377)
T ss_dssp CCCCSSSEEEEEECTTSSCEEEEETT-T------------EEC-CEECSTTS-CEEECCCEECSSSCEEEEEEEETTEEE
T ss_pred cccCCceEEEEEECCCCCEEEEEeCC-C------------cEEEEECCCCCC-cceeeEeecCCCCceEEEEEcCCCCEE
Confidence 23221111223456899999988764 1 467888777611 011112221111112234456899999
Q ss_pred EecCCC
Q 035640 447 VAGSNT 452 (596)
Q Consensus 447 v~GG~~ 452 (596)
++|+..
T Consensus 267 ~~~~~~ 272 (377)
T 3dwl_C 267 AAGYNY 272 (377)
T ss_dssp EEESSS
T ss_pred EEEcCC
Confidence 998754
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.066 Score=53.85 Aligned_cols=244 Identities=14% Similarity=0.112 Sum_probs=117.9
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEc-cC--CcEEEEcCCCCCcEEEe-CCCCCCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTL-PD--GGFIVVGGRGAFSYEYI-PPEGQSN 224 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L-~d--G~VyViGG~~~~~~E~y-P~~~~w~ 224 (596)
+.+||+.+++|+.+ ..+++||.. ..++..... +......-..... ++ ++.++.|+.++ .+.+| ...++|.
T Consensus 19 ~s~~~~~l~~~~~d---g~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 19 LDYYGKRLATCSSD---KTIKIFEVE-GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENGRWS 92 (379)
T ss_dssp ECSSSSEEEEEETT---SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEEETTEEE
T ss_pred EcCCCCEEEEEECC---CcEEEEecC-CCcceeeeE-ecCCCCcEEEEEeCCCCCCCEEEEeccCC-EEEEEEcCCCcee
Confidence 44688899998764 458888875 455544322 3322222233333 34 88998888764 45555 3333211
Q ss_pred CCcccccCcccccccCCCcCCcceeeeccCccceEEEcCC--CcEEEEecce--eEEecCCCCeEEEeeccccCCCCCCC
Q 035640 225 KSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPD--GNLFIFSNNR--SILLDPKANKVVREFPILTGGSRNYP 300 (596)
Q Consensus 225 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~d--G~Ifv~Gg~~--~e~yDp~t~~w~~~lp~mp~~~R~~p 300 (596)
....+.... .. --.+...++ |++++.|+.+ ..+||..+....... .+.. ...
T Consensus 93 ----~~~~~~~~~---------------~~-v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~-~~~-- 148 (379)
T 3jrp_A 93 ----QIAVHAVHS---------------AS-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDA-HAI-- 148 (379)
T ss_dssp ----EEEEECCCS---------------SC-EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE-EEEC-CTT--
T ss_pred ----EeeeecCCC---------------cc-eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE-EecC-CCC--
Confidence 000000000 00 001223466 8888888753 567888766321111 1111 000
Q ss_pred CCceEE-ecccccc--ccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccc-c
Q 035640 301 ASAMSV-LLPLKLR--ANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVM-G 375 (596)
Q Consensus 301 ~~g~av-~lpl~~~--~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~-~ 375 (596)
.-.++ ..|.... .......+++.+++|+.+ ..+..+|+......|... .+...... .
T Consensus 149 -~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----------------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 149 -GVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVR 210 (379)
T ss_dssp -CEEEEEECCCC----------CTTCEEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred -ceEEEEEcCccccccccccCCCCCCEEEEEeCC-----------------CeEEEEEecCCCcceeeEEEEecccCcEe
Confidence 00111 1110000 000000146778887754 245667876445556554 44322222 2
Q ss_pred ceEEeCC---CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCC
Q 035640 376 DMVILPT---EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 376 ~avvLpd---G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
+...-|+ ++++++|+.+ | .+.+||..+.....-..+.........-.....-|||+.+++|+..
T Consensus 211 ~~~~sp~~~~~~~l~s~~~d-g------------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp EEEECCCCSSSEEEEEEETT-S------------CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred EEEECCCCCCCCeEEEEeCC-C------------EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 2345688 8999998865 1 4689998775211111121111111222334567999999988864
Q ss_pred C
Q 035640 453 H 453 (596)
Q Consensus 453 ~ 453 (596)
.
T Consensus 278 g 278 (379)
T 3jrp_A 278 N 278 (379)
T ss_dssp S
T ss_pred C
Confidence 3
No 50
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.67 E-value=0.36 Score=49.09 Aligned_cols=90 Identities=8% Similarity=0.128 Sum_probs=53.1
Q ss_pred EEEEeCCCCCEEeCcCC--CccccccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEcc
Q 035640 123 SVLFDFETSELTALKLQ--TDTWCSSGGLTA-DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLP 199 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~--~~~fc~~~~~l~-dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~ 199 (596)
..+||..+.+....-.. +........+.+ ++.++++|+.+ ..+++||.. +.........-....+-.+.+.-+
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR---GATTLRDFS-GSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---TEEEEEETT-SCEEEEEECCCCSSCCEEEEEEET
T ss_pred EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---CEEEEEECC-CCceEEEeccCCCCCCeEEEEECC
Confidence 67888887766544321 222222234556 67888888764 578999987 554443321011112334555667
Q ss_pred CCcEEEEcCCCCCcEEEe
Q 035640 200 DGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 200 dG~VyViGG~~~~~~E~y 217 (596)
+++.++.|+.++ .+.+|
T Consensus 174 ~~~~l~~~~~d~-~i~i~ 190 (383)
T 3ei3_B 174 SRQMLATGDSTG-RLLLL 190 (383)
T ss_dssp TTTEEEEEETTS-EEEEE
T ss_pred CCCEEEEECCCC-CEEEE
Confidence 899999988664 45566
No 51
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.65 E-value=0.25 Score=49.58 Aligned_cols=132 Identities=9% Similarity=-0.048 Sum_probs=68.6
Q ss_pred cCCCCCceEeccC-CCcccceeeeeccCCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCE
Q 035640 55 ETGYNGKWELVSE-NSGVSAMHAILLPKINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSEL 133 (596)
Q Consensus 55 ~~~~~g~W~~v~~-~~~~~a~~~~ll~~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w 133 (596)
.+..+|+++.+.. .....+..+++- ++|++|+.+... + .....+||..++++
T Consensus 23 ~d~~tg~~~~~~~~~~~~~p~~~a~s-pdg~l~~~~~~~-~-------------------------~~~v~~~~~~~g~~ 75 (347)
T 3hfq_A 23 LDTTAKTLTNDGLLAATQNPTYLALS-AKDCLYSVDKED-D-------------------------EGGIAAWQIDGQTA 75 (347)
T ss_dssp EETTTTEEEEEEEEEECSCCCCEEEC-TTCEEEEEEEET-T-------------------------EEEEEEEEEETTEE
T ss_pred EcCCCCeEEEeeeeeccCCcceEEEc-cCCeEEEEEecC-C-------------------------CceEEEEEecCCcE
Confidence 4556677665421 112334456675 899976665431 0 01367788877776
Q ss_pred EeCcCC--CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC----------cccccEEEEccCC
Q 035640 134 TALKLQ--TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD----------PRWYSTQVTLPDG 201 (596)
Q Consensus 134 ~~l~~~--~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~----------~R~y~s~~~L~dG 201 (596)
+.+... ........++.+||+.+++.+..+ ..+.+||.....+...+.. +.. ..+-..++.-+||
T Consensus 76 ~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~--~~v~v~~~~~~g~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~spdg 152 (347)
T 3hfq_A 76 HKLNTVVAPGTPPAYVAVDEARQLVYSANYHK--GTAEVMKIAADGALTLTDT-VQHSGHGPRPEQDGSHIHYTDLTPDN 152 (347)
T ss_dssp EEEEEEEEESCCCSEEEEETTTTEEEEEETTT--TEEEEEEECTTSCEEEEEE-EECCCCCSSTTCSSCCEEEEEECTTS
T ss_pred EEeeeeecCCCCCEEEEECCCCCEEEEEeCCC--CEEEEEEeCCCCCeeecce-eecCCCCCCccccCCCceEEEECCCC
Confidence 665431 111222345568998666655432 4677888631223322211 110 1122346667799
Q ss_pred cEEEEcCCCCCcEEEe
Q 035640 202 GFIVVGGRGAFSYEYI 217 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y 217 (596)
++|+.+. ....+.+|
T Consensus 153 ~l~v~~~-~~~~v~~~ 167 (347)
T 3hfq_A 153 RLAVIDL-GSDKVYVY 167 (347)
T ss_dssp CEEEEET-TTTEEEEE
T ss_pred cEEEEeC-CCCEEEEE
Confidence 9776653 33456666
No 52
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.64 E-value=0.31 Score=52.54 Aligned_cols=241 Identities=15% Similarity=0.187 Sum_probs=121.9
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG 202 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~ 202 (596)
..+||..+.....+.... ....+.++.+||+.+++|+.+ ..+++||.. ...-..+.. ....-.+++.-+||+
T Consensus 327 i~~w~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~-~~~~~~~~~---~~~~v~~~~~s~dg~ 398 (577)
T 2ymu_A 327 VKLWNRNGQHLQTLTGHS-SSVWGVAFSPDGQTIASASDD---KTVKLWNRN-GQLLQTLTG---HSSSVRGVAFSPDGQ 398 (577)
T ss_dssp EEEEETTSCEEEEECCCS-SCEEEEEECTTSSEEEEEETT---SEEEEEETT-CCEEEEEEC---CSSCEEEEEECTTSS
T ss_pred EEEEeCCCCeeEEEeCCC-CCEEEEEECCCCCEEEEEeCC---CEEEEEcCC-CCEEEEecC---CCCCeEEEEECCCCC
Confidence 567787666554443222 122224567899999998754 468889864 332222211 111122345567899
Q ss_pred EEEEcCCCCCcEEEeCCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEecC
Q 035640 203 FIVVGGRGAFSYEYIPPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILLDP 280 (596)
Q Consensus 203 VyViGG~~~~~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~yDp 280 (596)
.++.|+.+ ..+.+|..+.+ ....+... ... -......+|+++++.++. ...+||.
T Consensus 399 ~l~~~~~d-~~v~~~~~~~~------~~~~~~~~--------~~~--------v~~~~~s~d~~~l~~~~~d~~v~~w~~ 455 (577)
T 2ymu_A 399 TIASASDD-KTVKLWNRNGQ------LLQTLTGH--------SSS--------VWGVAFSPDDQTIASASDDKTVKLWNR 455 (577)
T ss_dssp CEEEEETT-SEEEEECTTCC------EEEEEECC--------SSC--------EEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEEeCC-CEEEEEeCCCC------EEEEecCC--------CCC--------eEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 98888765 34566632211 00001000 000 001234579998888765 3567886
Q ss_pred CCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCC
Q 035640 281 KANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPN 360 (596)
Q Consensus 281 ~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~ 360 (596)
..... +.+ .+ ... .-.++.+ ..+++++++|+.+ ..+..+|. +
T Consensus 456 ~~~~~-~~~---~~-~~~---~v~~~~~----------spd~~~las~~~d-----------------~~i~iw~~---~ 497 (577)
T 2ymu_A 456 NGQLL-QTL---TG-HSS---SVRGVAF----------SPDGQTIASASDD-----------------KTVKLWNR---N 497 (577)
T ss_dssp TSCEE-EEE---EC-CSS---CEEEEEE----------CTTSCEEEEEETT-----------------SEEEEEET---T
T ss_pred CCCEE-EEE---cC-CCC---CEEEEEE----------cCCCCEEEEEeCC-----------------CEEEEEcC---C
Confidence 55432 233 21 111 1111111 1378888888754 12333442 2
Q ss_pred CceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEE
Q 035640 361 AVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVL 439 (596)
Q Consensus 361 ~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~L 439 (596)
.+-... .-...+... ....|||+.++.++.+ | .+.+||.... ....+.... . .-.....
T Consensus 498 ~~~~~~~~~h~~~v~~-l~~s~dg~~l~s~~~d-g------------~v~lwd~~~~---~~~~~~~h~-~--~v~~~~f 557 (577)
T 2ymu_A 498 GQLLQTLTGHSSSVRG-VAFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGHS-S--SVWGVAF 557 (577)
T ss_dssp SCEEEEEECCSSCEEE-EEECTTSSCEEEEETT-S------------EEEEECTTSC---EEEEEECCS-S--CEEEEEE
T ss_pred CCEEEEEeCCCCCEEE-EEEcCCCCEEEEEECc-C------------EEEEEeCCCC---EEEEEcCCC-C--CEEEEEE
Confidence 221111 222222222 3456899999998864 1 5789995433 443332211 1 1123445
Q ss_pred cCCCcEEEecCCC
Q 035640 440 LPDGTVLVAGSNT 452 (596)
Q Consensus 440 lpDG~Vlv~GG~~ 452 (596)
.|||+.+++||.+
T Consensus 558 s~dg~~l~s~~~D 570 (577)
T 2ymu_A 558 SPDGQTIASASSD 570 (577)
T ss_dssp CTTSSCEEEEETT
T ss_pred cCCCCEEEEEeCC
Confidence 7999999988864
No 53
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.63 E-value=0.66 Score=46.67 Aligned_cols=150 Identities=14% Similarity=0.107 Sum_probs=78.3
Q ss_pred eEEEEeCCCCCEEeCcCC-CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC--ceeecCcCC-----CCccccc
Q 035640 122 HSVLFDFETSELTALKLQ-TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGC--DWREYPTAL-----ADPRWYS 193 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~-~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~--~W~~~~~~M-----~~~R~y~ 193 (596)
...+||+.+.+....... .-....+.++.++|+||++... ...|.+||+. .. .-..+.... ...-..+
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~---~~~v~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~P 145 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA---LHQVFKLDPH-SKEGPLLILGRSMQPGSDQNHFCQP 145 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT---TTEEEEECTT-CSSCCSEEESBTTBCCCSTTCCSSE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC---CCEEEEEeCC-CCeEEEEEecccCCCCCCccccCCC
Confidence 478899998887543221 1112233455679999998753 3579999986 43 111111000 0111133
Q ss_pred -EEEEcc-CCcEEEEcCCCCCcEEEeCCCCCCCCCcccccCcccccccCCCcC-CcceeeeccCccceEEEc-CC-CcEE
Q 035640 194 -TQVTLP-DGGFIVVGGRGAFSYEYIPPEGQSNKSPVFFPLLKDTTNDLKGID-GQEMFLIENNLYPFVYLS-PD-GNLF 268 (596)
Q Consensus 194 -s~~~L~-dG~VyViGG~~~~~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~-~~~~~~~~~~~yp~~~~~-~d-G~If 268 (596)
+++.-+ +|++||..+.....+..|...++. ...+-.... +.. ... .-.+|...++ ++ |+||
T Consensus 146 ~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~-----~~~~~~~g~----~~~~~~~-----~~~~p~gia~d~~~g~l~ 211 (329)
T 3fvz_A 146 TDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF-----VTQWGEESS----GSSPRPG-----QFSVPHSLALVPHLDQLC 211 (329)
T ss_dssp EEEEECTTTCCEEEEECSSCCEEEEECTTSCE-----EEEECEECC----SSSCCTT-----EESCEEEEEEETTTTEEE
T ss_pred cEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE-----EEEeccCCC----CCCCCCc-----ccCCCcEEEEECCCCEEE
Confidence 345555 799999986433456666322211 000000000 000 000 0124665554 66 8999
Q ss_pred EEec--ceeEEecCCCCeEEEee
Q 035640 269 IFSN--NRSILLDPKANKVVREF 289 (596)
Q Consensus 269 v~Gg--~~~e~yDp~t~~w~~~l 289 (596)
+... ....+||+.+++..+.+
T Consensus 212 v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 212 VADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EEETTTTEEEEEETTTCCEEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEE
Confidence 9863 45788999877765444
No 54
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.62 E-value=0.39 Score=48.39 Aligned_cols=225 Identities=15% Similarity=0.192 Sum_probs=113.5
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKS 226 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~ 226 (596)
+.+||+++++|+.+ ..+++||.. +.+-... +. ...+-.+++.-++|+.++.||.++ .+.+| ..+..-.
T Consensus 63 ~s~d~~~l~s~s~D---g~v~iWd~~-~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~d~-~v~iw~~~~~~~~-- 132 (340)
T 1got_B 63 WGTDSRLLLSASQD---GKLIIWDSY-TTNKVHA---IPLRSSWVMTCAYAPSGNYVACGGLDN-ICSIYNLKTREGN-- 132 (340)
T ss_dssp ECTTSSEEEEEETT---TEEEEEETT-TCCEEEE---EECSSSCEEEEEECTTSSEEEEEETTC-EEEEEETTTCSBS--
T ss_pred ECCCCCEEEEEeCC---CcEEEEECC-CCCcceE---eecCCccEEEEEECCCCCEEEEEeCCC-eEEEEECccCCCc--
Confidence 34689999998865 579999976 4432211 11 122333555667999999998763 46666 3322100
Q ss_pred cccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEec-ceeEEecCCCCeEEEeeccccCCCCCCCCCceE
Q 035640 227 PVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSN-NRSILLDPKANKVVREFPILTGGSRNYPASAMS 305 (596)
Q Consensus 227 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg-~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~a 305 (596)
......+... ..... .+...++++|+..++ ....+||..+++....+ .+ ... .-.+
T Consensus 133 ~~~~~~~~~h---------------~~~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~-h~~---~v~~ 189 (340)
T 1got_B 133 VRVSRELAGH---------------TGYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF---TG-HTG---DVMS 189 (340)
T ss_dssp CEEEEEEECC---------------SSCEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CC-CSS---CEEE
T ss_pred ceeEEEecCC---------------CccEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEEEE---cC-CCC---ceEE
Confidence 0000000000 00000 111235666544443 24678999887754333 21 111 1111
Q ss_pred EeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCe
Q 035640 306 VLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTED 384 (596)
Q Consensus 306 v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~ 384 (596)
+. . ..++++++.|+.+ ..+..+|+. +.+-... .-....... ....|||+
T Consensus 190 ~~--~--------~~~~~~l~sg~~d-----------------~~v~~wd~~--~~~~~~~~~~h~~~v~~-v~~~p~~~ 239 (340)
T 1got_B 190 LS--L--------APDTRLFVSGACD-----------------ASAKLWDVR--EGMCRQTFTGHESDINA-ICFFPNGN 239 (340)
T ss_dssp EE--E--------CTTSSEEEEEETT-----------------SCEEEEETT--TCSEEEEECCCSSCEEE-EEECTTSS
T ss_pred EE--E--------CCCCCEEEEEeCC-----------------CcEEEEECC--CCeeEEEEcCCcCCEEE-EEEcCCCC
Confidence 11 1 1367788888765 234455654 2221111 112222222 34568999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCC
Q 035640 385 ILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 385 V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
.++.|+.+ | ++.+||..+. +-...-........-.....-|||+.+++|+..
T Consensus 240 ~l~s~s~d-~------------~v~iwd~~~~---~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 240 AFATGSDD-A------------TCRLFDLRAD---QELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp EEEEEETT-S------------CEEEEETTTT---EEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEcCC-C------------cEEEEECCCC---cEEEEEccCCcccceEEEEECCCCCEEEEECCC
Confidence 99999865 1 5689998876 322111111111112234457999999999864
No 55
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.62 E-value=0.57 Score=45.52 Aligned_cols=221 Identities=15% Similarity=0.216 Sum_probs=107.8
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCC--CCcccccEEEEc--cCCcEEEEcCCCCCcEEEeCCCCCCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTAL--ADPRWYSTQVTL--PDGGFIVVGGRGAFSYEYIPPEGQSN 224 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M--~~~R~y~s~~~L--~dG~VyViGG~~~~~~E~yP~~~~w~ 224 (596)
+.++|++|++... ...+.+||+. ..........- ...-..+....+ .+|++||.+......+.+|..+.+..
T Consensus 37 ~~~~g~l~v~~~~---~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~ 112 (286)
T 1q7f_A 37 VNAQNDIIVADTN---NHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFV 112 (286)
T ss_dssp ECTTCCEEEEEGG---GTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEE
T ss_pred ECCCCCEEEEECC---CCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEE
Confidence 3457898888643 2568899986 44322222100 011123434444 58999998743223455552222100
Q ss_pred CCcccccCcccccccCCCcCCcceeeeccCccceEE-EcCCCcEEEEec--ceeEEecCCCCeEEEeeccccCCCCCCCC
Q 035640 225 KSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVY-LSPDGNLFIFSN--NRSILLDPKANKVVREFPILTGGSRNYPA 301 (596)
Q Consensus 225 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~-~~~dG~Ifv~Gg--~~~e~yDp~t~~w~~~lp~mp~~~R~~p~ 301 (596)
..... .....|... +.++|+||+... ....+||+...... .+.. +. ....|
T Consensus 113 ---~~~~~-------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~-~~~~p- 166 (286)
T 1q7f_A 113 ---RKFGA-------------------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-KFGC-SK-HLEFP- 166 (286)
T ss_dssp ---EEECT-------------------TTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EEEC-TT-TCSSE-
T ss_pred ---EEecC-------------------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE-EeCC-CC-ccCCc-
Confidence 00000 001134444 347999999863 45778998765432 3321 11 11111
Q ss_pred CceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeec----CCCCccccce
Q 035640 302 SAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKER----MPSPRVMGDM 377 (596)
Q Consensus 302 ~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~----M~~~R~~~~a 377 (596)
.++.+ ..+++||+....+ ..+.++|+. ........ +..+ .+.
T Consensus 167 --~~i~~----------~~~g~l~v~~~~~-----------------~~i~~~~~~--g~~~~~~~~~g~~~~p---~~i 212 (286)
T 1q7f_A 167 --NGVVV----------NDKQEIFISDNRA-----------------HCVKVFNYE--GQYLRQIGGEGITNYP---IGV 212 (286)
T ss_dssp --EEEEE----------CSSSEEEEEEGGG-----------------TEEEEEETT--CCEEEEESCTTTSCSE---EEE
T ss_pred --EEEEE----------CCCCCEEEEECCC-----------------CEEEEEcCC--CCEEEEEccCCccCCC---cEE
Confidence 12211 1368888875422 245567653 22111111 2222 123
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEec
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAG 449 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~G 449 (596)
++-+||+|||...... ..+.+||++.. .-..+..-.....-++. .+-+||++|++.
T Consensus 213 ~~d~~G~l~v~~~~~~------------~~i~~~~~~g~---~~~~~~~~~~~~~~~~i-~~~~~g~l~vs~ 268 (286)
T 1q7f_A 213 GINSNGEILIADNHNN------------FNLTIFTQDGQ---LISALESKVKHAQCFDV-ALMDDGSVVLAS 268 (286)
T ss_dssp EECTTCCEEEEECSSS------------CEEEEECTTSC---EEEEEEESSCCSCEEEE-EEETTTEEEEEE
T ss_pred EECCCCCEEEEeCCCC------------EEEEEECCCCC---EEEEEcccCCCCcceeE-EECCCCcEEEEC
Confidence 3458999999875321 14689997654 33333221111111233 346899999984
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.59 E-value=0.28 Score=48.20 Aligned_cols=222 Identities=16% Similarity=0.163 Sum_probs=115.8
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCC---CCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTAL---ADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQS 223 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M---~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w 223 (596)
.+.++|+++++|+ + ..+++||.. +.+....-..+ .....-.+.+..+||+.+++|+.++ .+.+| ...++.
T Consensus 58 ~~~~~~~~l~~~~-d---g~i~iw~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~~~ 131 (337)
T 1gxr_A 58 TISNPTRHVYTGG-K---GCVKVWDIS-HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS-TLSIWDLAAPTP 131 (337)
T ss_dssp EECSSSSEEEEEC-B---SEEEEEETT-STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-EEEEEECCCC--
T ss_pred EEecCCcEEEEcC-C---CeEEEEECC-CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEECCCCCc
Confidence 4557899999988 2 578999976 43321110001 1222334555667899888887653 46666 443321
Q ss_pred CCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEecCCCCeEEEeeccccCCCCCCCC
Q 035640 224 NKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILLDPKANKVVREFPILTGGSRNYPA 301 (596)
Q Consensus 224 ~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~yDp~t~~w~~~lp~mp~~~R~~p~ 301 (596)
. ....+... ...--.....++|+.++.|+. ...+||..+.+....+.. ...
T Consensus 132 ~----~~~~~~~~----------------~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~----~~~--- 184 (337)
T 1gxr_A 132 R----IKAELTSS----------------APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG----HTD--- 184 (337)
T ss_dssp E----EEEEEECS----------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC----CSS---
T ss_pred c----eeeecccC----------------CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec----ccC---
Confidence 0 00000000 000012234578888888864 467899988775543321 111
Q ss_pred CceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEe
Q 035640 302 SAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVIL 380 (596)
Q Consensus 302 ~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvL 380 (596)
.-.++.+ ..+++.+++|+.+ ..+..+|+. +.+-... .... .-.+....
T Consensus 185 ~i~~~~~----------~~~~~~l~~~~~d-----------------g~i~~~d~~--~~~~~~~~~~~~--~v~~~~~s 233 (337)
T 1gxr_A 185 GASCIDI----------SNDGTKLWTGGLD-----------------NTVRSWDLR--EGRQLQQHDFTS--QIFSLGYC 233 (337)
T ss_dssp CEEEEEE----------CTTSSEEEEEETT-----------------SEEEEEETT--TTEEEEEEECSS--CEEEEEEC
T ss_pred ceEEEEE----------CCCCCEEEEEecC-----------------CcEEEEECC--CCceEeeecCCC--ceEEEEEC
Confidence 1111111 1256677777643 234556654 2221111 2221 11223456
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCC
Q 035640 381 PTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 381 pdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
|||+.+++|+.+ + .+.+||..+. +-..+... ...-......|||+.+++|+..
T Consensus 234 ~~~~~l~~~~~~-~------------~i~~~~~~~~---~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 234 PTGEWLAVGMES-S------------NVEVLHVNKP---DKYQLHLH---ESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp TTSSEEEEEETT-S------------CEEEEETTSS---CEEEECCC---SSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEcCC-C------------cEEEEECCCC---CeEEEcCC---ccceeEEEECCCCCEEEEecCC
Confidence 899999998754 1 4689998877 33222211 1112334567899999998863
No 57
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.58 E-value=0.48 Score=48.66 Aligned_cols=238 Identities=12% Similarity=0.149 Sum_probs=115.1
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKS 226 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~ 226 (596)
.+.+||+.+++|+.+ ..++++|.. +.+-...-. . ...+-.+++.-+||+.++.||.+. .+.+| .....-...
T Consensus 73 ~~sp~~~~l~s~s~D---~~v~iWd~~-~~~~~~~~~-~-h~~~v~~~~~s~~g~~las~~~d~-~v~iw~~~~~~~~~~ 145 (380)
T 3iz6_a 73 DWTPEKNWIVSASQD---GRLIVWNAL-TSQKTHAIK-L-HCPWVMECAFAPNGQSVACGGLDS-ACSIFNLSSQADRDG 145 (380)
T ss_dssp EECTTSSCEEEEETT---SEEEEEETT-TTEEEEEEE-C-CCTTCCCCEECTTSSEEEECCSSS-CCEEEECCCCSSCCC
T ss_pred EEcCCCCEEEEEeCC---CeEEEEECC-CCccceEEe-c-CCCCEEEEEECCCCCEEEEeeCCC-cEEEEECCCCccccC
Confidence 345789999999865 579999987 544322111 1 122333455667999999999764 34455 221110000
Q ss_pred cccccCcccccccCCCcCCcceeeeccCccceEEEcC-CCcEEEEecc--eeEEecCCCCeEEEeecc-ccCCCCCCCCC
Q 035640 227 PVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSP-DGNLFIFSNN--RSILLDPKANKVVREFPI-LTGGSRNYPAS 302 (596)
Q Consensus 227 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~-dG~Ifv~Gg~--~~e~yDp~t~~w~~~lp~-mp~~~R~~p~~ 302 (596)
..+... +.. |-. ..... +...+ ++..++.|+. ...+||..+++....+.. .+.+. .
T Consensus 146 --~~~~~~-~~~---gh~--------~~v~~-~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h-----~ 205 (380)
T 3iz6_a 146 --NMPVSR-VLT---GHK--------GYASS-CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH-----T 205 (380)
T ss_dssp --SSTTCC-BCC---CCS--------SCCCC-CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC-----C
T ss_pred --Ccccee-ecc---CCC--------cceEE-EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC-----c
Confidence 011100 000 000 00000 01123 2444555554 367899988775433311 11111 1
Q ss_pred ceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeCC
Q 035640 303 AMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILPT 382 (596)
Q Consensus 303 g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpd 382 (596)
.....+.. ...++.+++.|+.+ .++..+|+......-....-....... ....||
T Consensus 206 ~~v~~~~~-------~~~~~~~l~sgs~D-----------------~~v~~wd~~~~~~~~~~~~~h~~~v~~-v~~~p~ 260 (380)
T 3iz6_a 206 ADVLSLSI-------NSLNANMFISGSCD-----------------TTVRLWDLRITSRAVRTYHGHEGDINS-VKFFPD 260 (380)
T ss_dssp SCEEEEEE-------CSSSCCEEEEEETT-----------------SCEEEEETTTTCCCCEEECCCSSCCCE-EEECTT
T ss_pred cCeEEEEe-------ecCCCCEEEEEECC-----------------CeEEEEECCCCCcceEEECCcCCCeEE-EEEecC
Confidence 11111111 11367788888865 234456654211111111111222222 345789
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEE-ecCCCcc----cccceEEEEcCCCcEEEecCCCC
Q 035640 383 EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKE-LAAGTIP----RMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 383 G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~-~a~~~~~----R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
|+.++.|+.+. ++.+||..+. +-.. +...... ...-.....-|||+.+++|+...
T Consensus 261 ~~~l~s~s~D~-------------~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 261 GQRFGTGSDDG-------------TCRLFDMRTG---HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp SSEEEEECSSS-------------CEEEEETTTT---EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred CCeEEEEcCCC-------------eEEEEECCCC---cEEEEecccccccccccCceEEEEECCCCCEEEEEECCC
Confidence 99999998751 5789998876 3221 1111100 01122345678999999997643
No 58
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.58 E-value=0.46 Score=48.78 Aligned_cols=50 Identities=16% Similarity=0.290 Sum_probs=31.7
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTC 174 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~ 174 (596)
...+||..+.+....-..+...-....+.+||+.+++||.+ ..+++||..
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~ 138 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLS 138 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECC
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECC
Confidence 36788887765443222222222334567899999999975 457788864
No 59
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.55 E-value=0.78 Score=46.25 Aligned_cols=93 Identities=18% Similarity=-0.030 Sum_probs=48.4
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCC-CCCCeEEEE--eCCCCCceeecCcCCCCcccccEEEEc
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFG-GGANTVRYL--STCDGCDWREYPTALADPRWYSTQVTL 198 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~-~g~~~v~~f--dP~~t~~W~~~~~~M~~~R~y~s~~~L 198 (596)
+...+|+++.+++.+.......-...++.+||+.+.++... +....+.+| |+. +.+.+.+.. .......+....+
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-~g~~~~~~~-~~~~~~~p~~~~~ 107 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-KGTLHLLNT-QKTMGADPCYLTT 107 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-TTEEEEEEE-EECSSSCEEEEEE
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-CCcEEEeeE-eccCCCCcEEEEE
Confidence 45667889998887654321112223556789855554432 122456555 444 455554432 2222223444445
Q ss_pred cCCcEEEEcCCCCCcEEEe
Q 035640 199 PDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 199 ~dG~VyViGG~~~~~~E~y 217 (596)
||+.+++.......+.+|
T Consensus 108 -dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 108 -NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp -CSSEEEEEETTTTEEEEE
T ss_pred -CCCEEEEEECCCCEEEEE
Confidence 777555554444566676
No 60
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.54 E-value=0.11 Score=51.55 Aligned_cols=225 Identities=11% Similarity=0.100 Sum_probs=114.5
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNK 225 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~ 225 (596)
.+-+||.++++|+.+ ..+++||.. +.+-... +... ..-.++...++|+.++.|+.+ ..+.+| ..+++-
T Consensus 20 ~fsp~~~~l~s~~~d---g~v~lWd~~-~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~s~d-~~i~vwd~~~~~~-- 89 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYS---GRVELWNYE-TQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFNYNTGEK-- 89 (304)
T ss_dssp EECSSSSEEEEEETT---SEEEEEETT-TTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEETTTCCE--
T ss_pred EECCCCCEEEEEcCC---CcEEEEECC-CCceeEE---eeccCCcEEEEEEeCCCCEEEEECCC-CEEEEEECCCCcE--
Confidence 345789999999864 579999986 5433211 2211 112244556789999988865 456666 443310
Q ss_pred CcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEecCCCCeEEEeeccccCCCCCCCCCc
Q 035640 226 SPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILLDPKANKVVREFPILTGGSRNYPASA 303 (596)
Q Consensus 226 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~yDp~t~~w~~~lp~mp~~~R~~p~~g 303 (596)
... +.... ..--.+...+++++++.|+.+ ..+||..++.-. ...+.+ ... .-
T Consensus 90 ---~~~-~~~h~----------------~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~--~~~~~~-h~~---~v 143 (304)
T 2ynn_A 90 ---VVD-FEAHP----------------DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL--EQTFEG-HEH---FV 143 (304)
T ss_dssp ---EEE-EECCS----------------SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE--EEEECC-CCS---CE
T ss_pred ---EEE-EeCCC----------------CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch--hhhhcc-cCC---cE
Confidence 000 10000 000122345789988888754 677888765321 111221 111 11
Q ss_pred eEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEE--eC
Q 035640 304 MSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVI--LP 381 (596)
Q Consensus 304 ~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avv--Lp 381 (596)
.++.+ .| .++.+++.|+.+ .++..+|+........... ...+.-..... .+
T Consensus 144 ~~v~~--~p-------~~~~~l~sgs~D-----------------~~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 196 (304)
T 2ynn_A 144 MCVAF--NP-------KDPSTFASGCLD-----------------RTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLP 196 (304)
T ss_dssp EEEEE--CT-------TCTTEEEEEETT-----------------SEEEEEETTCSSCSEEEEC-CCTTCEEEEEECCST
T ss_pred EEEEE--CC-------CCCCEEEEEeCC-----------------CeEEEEECCCCCccceecc-CCcCcEEEEEEEEcC
Confidence 12211 11 246678888765 2344566542222222211 11111111111 35
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 382 TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 382 dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
++++++.|+.+. ++.+||..+. +- +..+......-.....-||+++++.|+...
T Consensus 197 ~~~~l~s~s~D~-------------~i~iWd~~~~---~~--~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 197 DKPYMITASDDL-------------TIKIWDYQTK---SC--VATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp TCCEEEEEETTS-------------EEEEEETTTT---EE--EEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCEEEEEcCCC-------------eEEEEeCCCC---cc--ceeeCCCCCCEEEEEECCCCCEEEEEcCCC
Confidence 888888887641 6789998876 32 111111112223455679999999998753
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.54 E-value=0.12 Score=53.29 Aligned_cols=233 Identities=15% Similarity=0.120 Sum_probs=114.0
Q ss_pred ecC-CCcEEEEcCCCCCCCeEEEEeCCCCCceeec----CcCCC-CcccccEEEEccCC-cEEEEcCCCCCcEEEe-CCC
Q 035640 149 LTA-DGDLVSTGGFGGGANTVRYLSTCDGCDWREY----PTALA-DPRWYSTQVTLPDG-GFIVVGGRGAFSYEYI-PPE 220 (596)
Q Consensus 149 ~l~-dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~----~~~M~-~~R~y~s~~~L~dG-~VyViGG~~~~~~E~y-P~~ 220 (596)
+.+ ++.++++|+.+ ..+++||.. +...... ...+. ....-.+++..++| .+++.|+.++ .+.+| ..+
T Consensus 89 ~~p~~~~~l~s~s~d---g~v~vw~~~-~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~ 163 (402)
T 2aq5_A 89 WCPHNDNVIASGSED---CTVMVWEIP-DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN-VILVWDVGT 163 (402)
T ss_dssp ECTTCTTEEEEEETT---SEEEEEECC-TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS-CEEEEETTT
T ss_pred eCCCCCCEEEEEeCC---CeEEEEEcc-CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC-EEEEEECCC
Confidence 445 78899998864 568999976 5433110 00121 11222344556677 6888887654 45666 333
Q ss_pred CCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEecCCCCeEEEeeccccCCCCC
Q 035640 221 GQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILLDPKANKVVREFPILTGGSRN 298 (596)
Q Consensus 221 ~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~yDp~t~~w~~~lp~mp~~~R~ 298 (596)
++. ...+..... . .. --.+...++|++++.|+. ...+||..+++....+.....+.+
T Consensus 164 ~~~------~~~~~~~~~------~-------~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~- 222 (402)
T 2aq5_A 164 GAA------VLTLGPDVH------P-------DT-IYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTR- 222 (402)
T ss_dssp TEE------EEEECTTTC------C-------SC-EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSS-
T ss_pred CCc------cEEEecCCC------C-------Cc-eEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCc-
Confidence 211 000100000 0 00 011233568988888865 467899998875533311110011
Q ss_pred CCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeecCCCCccccceE
Q 035640 299 YPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMV 378 (596)
Q Consensus 299 ~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~av 378 (596)
....+.. .+++++++|... .. ...+..+|+......-....+.....-....
T Consensus 223 ---~~~~~~~-----------~~~~~l~~g~~~-~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 223 ---PVHAVFV-----------SEGKILTTGFSR-MS-------------ERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp ---CCEEEEC-----------STTEEEEEEECT-TC-------------CEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred ---ceEEEEc-----------CCCcEEEEeccC-CC-------------CceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 1112221 378888888311 00 1234556654221111111222222222234
Q ss_pred EeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCc--eEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 379 ILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQR--FKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 379 vLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~--Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
.-|||+.+++.|...| .+.+||..+. + ...+...... .........|||++++.+++
T Consensus 275 ~s~~~~~l~~~g~~dg------------~i~i~d~~~~---~~~~~~l~~~~~~-~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDS------------SIRYFEITSE---APFLHYLSMFSSK-ESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp EETTTTEEEEEETTCS------------CEEEEEECSS---TTCEEEEEEECCS-SCCSEEEECCGGGSCGGGTE
T ss_pred EcCCCCEEEEEEcCCC------------eEEEEEecCC---CcceEeecccccC-CcccceEEecccccceecce
Confidence 5689888765443211 4688998876 4 3333332211 12234456789998877654
No 62
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.54 E-value=0.17 Score=51.39 Aligned_cols=139 Identities=14% Similarity=0.112 Sum_probs=74.4
Q ss_pred EEEEeCCCCCEEeCc---CCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEEc
Q 035640 123 SVLFDFETSELTALK---LQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVTL 198 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~---~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~L 198 (596)
..+||..+++|.... .-+........+.+||+.+++|+.+ ..++++|.. +.++..... +... ..-.+++.-
T Consensus 40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D---~~v~iw~~~-~~~~~~~~~-~~~h~~~v~~v~~s 114 (345)
T 3fm0_A 40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD---ATTCIWKKN-QDDFECVTT-LEGHENEVKSVAWA 114 (345)
T ss_dssp EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT---SCEEEEEEC-CC-EEEEEE-ECCCSSCEEEEEEC
T ss_pred EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC---CcEEEEEcc-CCCeEEEEE-ccCCCCCceEEEEe
Confidence 567777777654321 1122222234456799999999865 457888876 555543321 3221 222345556
Q ss_pred cCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--ee
Q 035640 199 PDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RS 275 (596)
Q Consensus 199 ~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~ 275 (596)
+||+.++.|+.++ ++.+| .....- ......+.... . . --.+...++|++++.|+. ..
T Consensus 115 p~~~~l~s~s~D~-~v~iwd~~~~~~---~~~~~~~~~h~--------~-------~-v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 115 PSGNLLATCSRDK-SVWVWEVDEEDE---YECVSVLNSHT--------Q-------D-VKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp TTSSEEEEEETTS-CEEEEEECTTSC---EEEEEEECCCC--------S-------C-EEEEEECSSSSCEEEEETTSCE
T ss_pred CCCCEEEEEECCC-eEEEEECCCCCC---eEEEEEecCcC--------C-------C-eEEEEECCCCCEEEEEeCCCcE
Confidence 7899999988764 45555 322110 00011110000 0 0 011233578988888875 36
Q ss_pred EEecCCCCeEE
Q 035640 276 ILLDPKANKVV 286 (596)
Q Consensus 276 e~yDp~t~~w~ 286 (596)
.+||..+++|.
T Consensus 175 ~~w~~~~~~~~ 185 (345)
T 3fm0_A 175 KLYREEEDDWV 185 (345)
T ss_dssp EEEEEETTEEE
T ss_pred EEEEecCCCEE
Confidence 78888888764
No 63
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.48 E-value=0.33 Score=58.04 Aligned_cols=254 Identities=11% Similarity=0.082 Sum_probs=124.0
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-cccccEEEEcc--
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-PRWYSTQVTLP-- 199 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-~R~y~s~~~L~-- 199 (596)
..+||..+.+....-..+........+.+||+.+++|+.+ ..+++||.. +.+.... +.. ...-.+.+..+
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---~~v~vwd~~-~~~~~~~---~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD---KKVKIWDSA-TGKLVHT---YDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCEEEE---EECCSSCEEEEEECSSS
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEECC-CCceEEE---EcCCCCcEEEEEEecCC
Confidence 6788888876433212222222234567799999999864 569999987 5543221 211 12222333334
Q ss_pred CCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eE
Q 035640 200 DGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SI 276 (596)
Q Consensus 200 dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e 276 (596)
++.+++.|+.+ ..+.+| ..+++. ... +.... ..--.+...++|+.++.|+.+ ..
T Consensus 712 ~~~~l~sg~~d-~~v~vwd~~~~~~-----~~~-~~~h~----------------~~v~~~~~sp~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 712 NHLLLATGSND-FFLKLWDLNQKEC-----RNT-MFGHT----------------NSVNHCRFSPDDELLASCSADGTLR 768 (1249)
T ss_dssp SCCEEEEEETT-SCEEEEETTSSSE-----EEE-ECCCS----------------SCEEEEEECSSTTEEEEEESSSEEE
T ss_pred CceEEEEEeCC-CeEEEEECCCcch-----hhe-ecCCC----------------CCEEEEEEecCCCEEEEEECCCeEE
Confidence 44566666654 346666 433210 000 00000 000123345799988888753 66
Q ss_pred EecCCCCeEEEeecccc--CCCCCCCC--CceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceE
Q 035640 277 LLDPKANKVVREFPILT--GGSRNYPA--SAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCG 352 (596)
Q Consensus 277 ~yDp~t~~w~~~lp~mp--~~~R~~p~--~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 352 (596)
+||..+.+....+.... ......+. ......+.. ..+++.+++++. ..+.
T Consensus 769 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--------s~dg~~l~~~~~------------------~~v~ 822 (1249)
T 3sfz_A 769 LWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW--------SADGDKIIVAAK------------------NKVL 822 (1249)
T ss_dssp EEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB--------CTTSSEEEEEET------------------TEEE
T ss_pred EEeCCCCcccceecccccccccCCccccccceEEEEEE--------CCCCCEEEEEcC------------------CcEE
Confidence 78887765433221100 00000000 000001111 125666665542 1234
Q ss_pred EEEeeCCCCceEee-c-CCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcc
Q 035640 353 RIDITKPNAVWKKE-R-MPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIP 430 (596)
Q Consensus 353 ~id~~~~~~~W~~~-~-M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~ 430 (596)
.+|+. +...... . -...... .....|+|+++++|+.+ | .+.+||..+. +-.. .....
T Consensus 823 ~~d~~--~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~d-g------------~v~vwd~~~~---~~~~--~~~~h 881 (1249)
T 3sfz_A 823 LFDIH--TSGLLAEIHTGHHSTIQ-YCDFSPYDHLAVIALSQ-Y------------CVELWNIDSR---LKVA--DCRGH 881 (1249)
T ss_dssp EEETT--TCCEEEEEECSSSSCCC-EEEECSSTTEEEEECSS-S------------CEEEEETTTT---EEEE--EECCC
T ss_pred EEEec--CCCceeEEcCCCCCceE-EEEEcCCCCEEEEEeCC-C------------eEEEEEcCCC---ceee--ecCCC
Confidence 55554 2222222 2 1222222 24567899999998864 1 5789998776 3221 11111
Q ss_pred cccceEEEEcCCCcEEEecCCCC
Q 035640 431 RMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 431 R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
...-......|||+.+++|+...
T Consensus 882 ~~~v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 882 LSWVHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS
T ss_pred ccceEEEEECCCCCEEEEEeCCC
Confidence 11223345678999999988654
No 64
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.48 E-value=0.29 Score=50.03 Aligned_cols=64 Identities=14% Similarity=0.091 Sum_probs=32.9
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCc-CC-CCcccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPT-AL-ADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~-~M-~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
.+.+|+++++.+.. ..|++||.. +.+-..... .+ .....-.+++..+||+.++.|+.++ .+.+|
T Consensus 101 ~~s~d~~~l~~s~d----g~v~lWd~~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-~v~iw 166 (357)
T 4g56_B 101 AWVSEKGILVASDS----GAVELWEIL-EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-SVKVW 166 (357)
T ss_dssp EEETTTEEEEEETT----SCEEEC---------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-CEEEE
T ss_pred EEcCCCCEEEEECC----CEEEEeecc-ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-eEEEE
Confidence 45678888776543 358999876 443211110 00 1112223455677999999988764 45666
No 65
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.45 E-value=0.59 Score=46.02 Aligned_cols=66 Identities=14% Similarity=0.123 Sum_probs=35.5
Q ss_pred ceEEEEeeCCCCceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEE--cCCCCCCCceEEecC
Q 035640 350 DCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALY--TPRGPSRQRFKELAA 426 (596)
Q Consensus 350 s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~Y--DP~t~~g~~Wt~~a~ 426 (596)
.+.++|+...+.+++.. .++....-.+...-|||+.+++++...+ .+.+| |+++. +++.+..
T Consensus 254 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~------------~v~v~~~d~~~g---~~~~~~~ 318 (343)
T 1ri6_A 254 LITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH------------HISVYEIVGEQG---LLHEKGR 318 (343)
T ss_dssp EEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTC------------EEEEEEEETTTT---EEEEEEE
T ss_pred EEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCC------------eEEEEEEcCCCc---eeeEccc
Confidence 45567765333445544 3322222223456789986555553211 45677 88887 7877665
Q ss_pred CCcc
Q 035640 427 GTIP 430 (596)
Q Consensus 427 ~~~~ 430 (596)
.+..
T Consensus 319 ~~~g 322 (343)
T 1ri6_A 319 YAVG 322 (343)
T ss_dssp EECS
T ss_pred cccC
Confidence 5443
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.45 E-value=0.09 Score=52.87 Aligned_cols=64 Identities=16% Similarity=0.143 Sum_probs=41.1
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
.+.+||+++++|+.+ ..+++||.. +.+|..... +... ..-.+.+..++|+.++.|+.++ .+.+|
T Consensus 15 ~~s~~~~~l~~~~~d---~~v~i~~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~dg-~i~vw 79 (372)
T 1k8k_C 15 AWNKDRTQIAICPNN---HEVHIYEKS-GNKWVQVHE-LKEHNGQVTGVDWAPDSNRIVTCGTDR-NAYVW 79 (372)
T ss_dssp EECTTSSEEEEECSS---SEEEEEEEE-TTEEEEEEE-EECCSSCEEEEEEETTTTEEEEEETTS-CEEEE
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC-CCcEEeeee-ecCCCCcccEEEEeCCCCEEEEEcCCC-eEEEE
Confidence 345689999998764 579999987 666544432 3322 2223445566899999988654 35555
No 67
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.42 E-value=0.38 Score=49.68 Aligned_cols=52 Identities=17% Similarity=0.143 Sum_probs=32.0
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCD 178 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~ 178 (596)
..+||..+.+....-..+........+.++|+.+++|+.+ ..+++||.. +.+
T Consensus 147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~-~~~ 198 (393)
T 1erj_A 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLR-TGQ 198 (393)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTE
T ss_pred EEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEEEECC-CCe
Confidence 6788887776543222222222223456789988988764 578999976 543
No 68
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.41 E-value=1 Score=49.51 Aligned_cols=89 Identities=8% Similarity=-0.008 Sum_probs=48.0
Q ss_pred EEEEeCCCCCEEe-CcC------CCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEE
Q 035640 123 SVLFDFETSELTA-LKL------QTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQ 195 (596)
Q Consensus 123 ~~~yDp~t~~w~~-l~~------~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~ 195 (596)
..+||..+++... +.. .+........+.+||+.+++|+.+ +.++++|.. +.+....-. +...-.....
T Consensus 214 i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~-~~~~~~~~~-~~~~~~~~~~ 288 (611)
T 1nr0_A 214 IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVA-TLKVEKTIP-VGTRIEDQQL 288 (611)
T ss_dssp EEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEEEE-CCSSGGGCEE
T ss_pred EEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCceeeeec-CCCCccceeE
Confidence 6788887766543 211 122222234456799999999865 679999987 655432111 1111111111
Q ss_pred EEccCCcEEEEcCCCCCcEEEe
Q 035640 196 VTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 196 ~~L~dG~VyViGG~~~~~~E~y 217 (596)
....+++.++.++.++ .+.+|
T Consensus 289 ~~~~~~~~l~s~s~d~-~i~~~ 309 (611)
T 1nr0_A 289 GIIWTKQALVSISANG-FINFV 309 (611)
T ss_dssp EEEECSSCEEEEETTC-CEEEE
T ss_pred EEEEcCCEEEEEeCCC-cEEEE
Confidence 2222677777776553 45555
No 69
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.38 E-value=0.73 Score=48.06 Aligned_cols=243 Identities=15% Similarity=0.100 Sum_probs=119.3
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDG 201 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG 201 (596)
...+||..+++....-..+.... ..+..++..+++|+.+ ..+++||.. +.+-... +............ +|
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~~l~s~s~d---g~i~~wd~~-~~~~~~~---~~~~~~~v~~~~~-~~ 249 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRD---ATLRVWDIE-TGQCLHV---LMGHVAAVRCVQY-DG 249 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEESS-SCCEEEE---EECCSSCEEEEEE-CS
T ss_pred eEEEEECCcCcEEEEECCCCCcE--EEEEecCCEEEEEeCC---CEEEEEECC-CCcEEEE---EcCCcccEEEEEE-CC
Confidence 36788887765432211111110 1122256777887754 578999976 4432211 2111222233444 88
Q ss_pred cEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEe
Q 035640 202 GFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILL 278 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~y 278 (596)
+.+++|+.++ .+.+| ..+.+ ....+.. ...+...+..+|+.++.|+. ...+|
T Consensus 250 ~~l~~~~~dg-~i~iwd~~~~~------~~~~~~~------------------~~~~v~~~~~~~~~l~~~~~d~~i~i~ 304 (445)
T 2ovr_B 250 RRVVSGAYDF-MVKVWDPETET------CLHTLQG------------------HTNRVYSLQFDGIHVVSGSLDTSIRVW 304 (445)
T ss_dssp SCEEEEETTS-CEEEEEGGGTE------EEEEECC------------------CSSCEEEEEECSSEEEEEETTSCEEEE
T ss_pred CEEEEEcCCC-EEEEEECCCCc------EeEEecC------------------CCCceEEEEECCCEEEEEeCCCeEEEE
Confidence 8888888654 45555 33221 0000000 00112223348888888765 46789
Q ss_pred cCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeC
Q 035640 279 DPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITK 358 (596)
Q Consensus 279 Dp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~ 358 (596)
|..+++....+ .. ... ....+- .+++.+++|+.+ ..+..+|+.
T Consensus 305 d~~~~~~~~~~---~~-~~~----~v~~~~-----------~~~~~l~~~~~d-----------------g~i~vwd~~- 347 (445)
T 2ovr_B 305 DVETGNCIHTL---TG-HQS----LTSGME-----------LKDNILVSGNAD-----------------STVKIWDIK- 347 (445)
T ss_dssp ETTTCCEEEEE---CC-CCS----CEEEEE-----------EETTEEEEEETT-----------------SCEEEEETT-
T ss_pred ECCCCCEEEEE---cC-Ccc----cEEEEE-----------EeCCEEEEEeCC-----------------CeEEEEECC-
Confidence 99887654333 21 111 111111 245577777754 234556654
Q ss_pred CCCceEee-cCCC-CccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceE-EecCCC--ccccc
Q 035640 359 PNAVWKKE-RMPS-PRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFK-ELAAGT--IPRMY 433 (596)
Q Consensus 359 ~~~~W~~~-~M~~-~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt-~~a~~~--~~R~y 433 (596)
+.+-... ..+. ......+ +..+++.+++|+.+ | .+.+||..+. +.. .+.... .....
T Consensus 348 -~~~~~~~~~~~~~~~~~v~~-~~~~~~~l~s~~~d-g------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~ 409 (445)
T 2ovr_B 348 -TGQCLQTLQGPNKHQSAVTC-LQFNKNFVITSSDD-G------------TVKLWDLKTG---EFIRNLVTLESGGSGGV 409 (445)
T ss_dssp -TCCEEEEECSTTSCSSCEEE-EEECSSEEEEEETT-S------------EEEEEETTTC---CEEEEEEECTTGGGTCE
T ss_pred -CCcEEEEEccCCCCCCCEEE-EEECCCEEEEEeCC-C------------eEEEEECCCC---ceeeeeeccccCCCCce
Confidence 2221111 2111 1122222 34488999988864 1 5789998887 432 221111 11111
Q ss_pred ceEEEEcCCCcEEEecCCCCC
Q 035640 434 HSSSVLLPDGTVLVAGSNTHN 454 (596)
Q Consensus 434 hs~a~LlpDG~Vlv~GG~~~~ 454 (596)
-.....-|||+++++|+....
T Consensus 410 v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 410 VWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEEECSSEEEEEEECSSSS
T ss_pred EEEEEecCCEEEEEEcccCCC
Confidence 112234689999999987543
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.37 E-value=0.51 Score=50.87 Aligned_cols=251 Identities=8% Similarity=-0.017 Sum_probs=121.8
Q ss_pred EEEEeCCCC----C-EEeCcCCCccc-cccCeecC--CCcEEEEcCCCCCCCeEEEEeCCCCC------ceeecCcCCC-
Q 035640 123 SVLFDFETS----E-LTALKLQTDTW-CSSGGLTA--DGDLVSTGGFGGGANTVRYLSTCDGC------DWREYPTALA- 187 (596)
Q Consensus 123 ~~~yDp~t~----~-w~~l~~~~~~f-c~~~~~l~--dG~ilv~GG~~~g~~~v~~fdP~~t~------~W~~~~~~M~- 187 (596)
..+||..+. + ...+.. +... -....+.+ ||+++++|+.+ ..+++||.. +. +...... +.
T Consensus 41 v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~~l~s~~~d---g~v~vw~~~-~~~~~~~~~~~~~~~-~~~ 114 (615)
T 1pgu_A 41 AFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQYLCSGDES---GKVIVWGWT-FDKESNSVEVNVKSE-FQV 114 (615)
T ss_dssp EEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCCEEEEEETT---SEEEEEEEE-EEGGGTEEEEEEEEE-EEC
T ss_pred EEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCCEEEEecCC---CEEEEEeCC-CCcccccccccccch-hhc
Confidence 567787765 2 223322 1111 12234567 99999999864 468888874 32 2222211 22
Q ss_pred CcccccEEEEccCCcEEEEcCCCC---CcEEEeCCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCC
Q 035640 188 DPRWYSTQVTLPDGGFIVVGGRGA---FSYEYIPPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPD 264 (596)
Q Consensus 188 ~~R~y~s~~~L~dG~VyViGG~~~---~~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~d 264 (596)
....-.+.+.-+||+.++++|.+. ..+.+|. .++ .... +... .. . --.....++
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~-----~~~~-~~~~--------~~-------~-v~~~~~~~~ 171 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGN-----SLGE-VSGH--------SQ-------R-INACHLKQS 171 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCC-----EEEE-CCSC--------SS-------C-EEEEEECSS
T ss_pred ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCC-----ccee-eecC--------Cc-------c-EEEEEECCC
Confidence 122334555667999998888653 1233322 110 0000 1000 00 0 012233567
Q ss_pred Cc-EEEEecc--eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCC-CEEEEEcCccCCccccccc
Q 035640 265 GN-LFIFSNN--RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATK-AKVLVCGGAQWDSFYFSET 340 (596)
Q Consensus 265 G~-Ifv~Gg~--~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~-gkI~v~GG~~~~~~~~~~~ 340 (596)
|+ +++.|+. ...+||..+.+....+..-. .... .-.++.+ ..+ ++.+++|+.+
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~--~~~~--~v~~~~~----------~~~~~~~l~~~~~d--------- 228 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH--KQGS--FVRDVEF----------SPDSGEFVITVGSD--------- 228 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEECSSS--CTTC--CEEEEEE----------CSTTCCEEEEEETT---------
T ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeeecccC--CCCc--eEEEEEE----------CCCCCCEEEEEeCC---------
Confidence 76 6777764 46788988766543332110 0000 0011111 125 7788888754
Q ss_pred cccccCCCCceEEEEeeCCCCceEeecC-----CCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCC
Q 035640 341 KKQFFPALQDCGRIDITKPNAVWKKERM-----PSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRG 415 (596)
Q Consensus 341 ~~~~~~a~~s~~~id~~~~~~~W~~~~M-----~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t 415 (596)
..+..+|+. +.+... .+ .....-. ++...+++.+++++.+ + .+.+||..+
T Consensus 229 --------g~i~vwd~~--~~~~~~-~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~d-~------------~i~~wd~~~ 283 (615)
T 1pgu_A 229 --------RKISCFDGK--SGEFLK-YIEDDQEPVQGGIF-ALSWLDSQKFATVGAD-A------------TIRVWDVTT 283 (615)
T ss_dssp --------CCEEEEETT--TCCEEE-ECCBTTBCCCSCEE-EEEESSSSEEEEEETT-S------------EEEEEETTT
T ss_pred --------CeEEEEECC--CCCEeE-EecccccccCCceE-EEEEcCCCEEEEEcCC-C------------cEEEEECCC
Confidence 134456654 222211 22 2221112 2333399999998764 1 578999887
Q ss_pred CCCCceEEecCCC-cccccceEEEEcCCCcEEEecCCCC
Q 035640 416 PSRQRFKELAAGT-IPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 416 ~~g~~Wt~~a~~~-~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
. +-...-... .+......++..++++.+++|+...
T Consensus 284 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 284 S---KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp T---EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred C---cEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 6 432211111 1112223444456888888887654
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.23 Score=49.70 Aligned_cols=89 Identities=10% Similarity=0.146 Sum_probs=49.9
Q ss_pred EEEEeCCCCCEEeCcCC--CccccccCeecCC--CcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-cccccEEEE
Q 035640 123 SVLFDFETSELTALKLQ--TDTWCSSGGLTAD--GDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-PRWYSTQVT 197 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~--~~~fc~~~~~l~d--G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-~R~y~s~~~ 197 (596)
..+||...+++..+... +........+.++ ++++++|+.+ ..+++||.. +.+|..... +.. ...-.+++.
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iwd~~-~~~~~~~~~-~~~~~~~v~~~~~ 109 (379)
T 3jrp_A 35 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE-NGRWSQIAV-HAVHSASVNSVQW 109 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEE
T ss_pred EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC---CEEEEEEcC-CCceeEeee-ecCCCcceEEEEe
Confidence 56677665555443321 1111111223344 8899998864 468899987 777655432 332 222234445
Q ss_pred ccC--CcEEEEcCCCCCcEEEe
Q 035640 198 LPD--GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 198 L~d--G~VyViGG~~~~~~E~y 217 (596)
.++ |+.+++|+.++ .+.+|
T Consensus 110 ~~~~~~~~l~~~~~d~-~i~v~ 130 (379)
T 3jrp_A 110 APHEYGPLLLVASSDG-KVSVV 130 (379)
T ss_dssp CCGGGCSEEEEEETTS-EEEEE
T ss_pred CCCCCCCEEEEecCCC-cEEEE
Confidence 566 88899888654 45566
No 72
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.27 Score=49.42 Aligned_cols=261 Identities=15% Similarity=0.145 Sum_probs=120.5
Q ss_pred EEEEeCCCCCEEeCcC---C-CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC-----ceeecCcCCCC-cccc
Q 035640 123 SVLFDFETSELTALKL---Q-TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGC-----DWREYPTALAD-PRWY 192 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~---~-~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~-----~W~~~~~~M~~-~R~y 192 (596)
..+||..++++..+.. . +........+.++|+++++|+.+ ..+++||.. .. ++..... +.. ...-
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~-~~~~~~~~~~~~~~-~~~h~~~V 110 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKE-ESADRTFEMDLLAI-IEGHENEV 110 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC--------CCCEEEEE-EC----CE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcc-cCcCccccceeEEE-EcCCCCcE
Confidence 5677776654433221 1 22222223456789999999865 468889874 21 1221111 211 1112
Q ss_pred cEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEe
Q 035640 193 STQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFS 271 (596)
Q Consensus 193 ~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~G 271 (596)
.+++.-+||+.++.|+.+. ++.+| .....- .......+... ... --.+.-.++|++++.|
T Consensus 111 ~~v~~sp~g~~las~s~D~-~v~iwd~~~~~~--~~~~~~~~~~h--------~~~--------v~~v~~~p~~~~l~s~ 171 (330)
T 2hes_X 111 KGVAWSNDGYYLATCSRDK-SVWIWETDESGE--EYECISVLQEH--------SQD--------VKHVIWHPSEALLASS 171 (330)
T ss_dssp EEEEECTTSCEEEEEETTS-CEEEEECCTTCC--CCEEEEEECCC--------SSC--------EEEEEECSSSSEEEEE
T ss_pred EEEEECCCCCEEEEEeCCC-EEEEEeccCCCC--CeEEEEEeccC--------CCc--------eEEEEECCCCCEEEEE
Confidence 2344456899998888654 46666 321100 00011001000 000 0012234789998888
Q ss_pred cce--eEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCC
Q 035640 272 NNR--SILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQ 349 (596)
Q Consensus 272 g~~--~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~ 349 (596)
+.+ ..+||..++.|. .+..+.+ ... .-.++. ..| ...+..++.|+.+ .
T Consensus 172 s~D~~i~iW~~~~~~~~-~~~~~~~-h~~---~v~~~~--~~~------~~~~~~l~s~s~D-----------------~ 221 (330)
T 2hes_X 172 SYDDTVRIWKDYDDDWE-CVAVLNG-HEG---TVWSSD--FDK------TEGVFRLCSGSDD-----------------S 221 (330)
T ss_dssp ETTSCEEEEEEETTEEE-EEEEECC-CSS---CEEEEE--ECC------SSSSCEEEEEETT-----------------S
T ss_pred cCCCeEEEEECCCCCee-EEEEccC-CCC---cEEEEE--ecC------CCCeeEEEEEeCC-----------------C
Confidence 754 567887776653 3433332 111 001111 111 0125667777754 1
Q ss_pred ceEEEEeeCC----CCceEee-cCCC-CccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEE
Q 035640 350 DCGRIDITKP----NAVWKKE-RMPS-PRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKE 423 (596)
Q Consensus 350 s~~~id~~~~----~~~W~~~-~M~~-~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~ 423 (596)
++..+|+... ...|... .++. ......++...++.+++.||.+ | .+.+||..+. +|..
T Consensus 222 ~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~d-g------------~v~iw~~~~~---~~~~ 285 (330)
T 2hes_X 222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGAD-G------------VLAVYEEVDG---EWKV 285 (330)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETT-S------------CEEEEEEETT---EEEE
T ss_pred eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCC-C------------EEEEEEcCCC---ceEE
Confidence 2334444321 2345554 4432 1111222333344566677654 1 5689998887 7865
Q ss_pred ecCCCccccc--ceEEEEcC--CCcEEEecCCCC
Q 035640 424 LAAGTIPRMY--HSSSVLLP--DGTVLVAGSNTH 453 (596)
Q Consensus 424 ~a~~~~~R~y--hs~a~Llp--DG~Vlv~GG~~~ 453 (596)
+......... -.+....| ||++++.||...
T Consensus 286 ~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 286 FAKRALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp EEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred EeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence 4332111111 11223446 799999988643
No 73
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.33 E-value=1 Score=45.10 Aligned_cols=135 Identities=15% Similarity=0.203 Sum_probs=75.3
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPD 200 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~d 200 (596)
...+||..+.+....-...........+.+||+.+++|+.. ..+++||.. +.+-... +. ....-.+.+.-+|
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~-~~~~~~~---~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE-SGKKEYS---LDTRGKFILSIAYSPD 175 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT-TCSEEEE---EECSSSCEEEEEECTT
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC-CCceeEE---ecCCCceEEEEEECCC
Confidence 46788888775432211111112224566899999999864 568899976 4432111 21 1222335556679
Q ss_pred CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEE
Q 035640 201 GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SIL 277 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~ 277 (596)
|+.++.|+.++ .+.+| ..+.+ ....+.... .... .+...++|++++.|+.+ ..+
T Consensus 176 g~~lasg~~dg-~i~iwd~~~~~------~~~~~~~h~---------------~~v~-~l~~spd~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 176 GKYLASGAIDG-IINIFDIATGK------LLHTLEGHA---------------MPIR-SLTFSPDSQLLVTASDDGYIKI 232 (321)
T ss_dssp SSEEEEEETTS-CEEEEETTTTE------EEEEECCCS---------------SCCC-EEEECTTSCEEEEECTTSCEEE
T ss_pred CCEEEEEcCCC-eEEEEECCCCc------EEEEEcccC---------------Ccee-EEEEcCCCCEEEEEcCCCeEEE
Confidence 99999988764 46666 43321 110010000 0001 22345799999998764 678
Q ss_pred ecCCCCeEE
Q 035640 278 LDPKANKVV 286 (596)
Q Consensus 278 yDp~t~~w~ 286 (596)
||..+.+..
T Consensus 233 wd~~~~~~~ 241 (321)
T 3ow8_A 233 YDVQHANLA 241 (321)
T ss_dssp EETTTCCEE
T ss_pred EECCCccee
Confidence 998877654
No 74
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.94 Score=46.06 Aligned_cols=267 Identities=11% Similarity=0.106 Sum_probs=122.9
Q ss_pred eEEEEeCCCCCEE-eCcCC-CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC--ceeecCcCCCCc-ccccEEE
Q 035640 122 HSVLFDFETSELT-ALKLQ-TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGC--DWREYPTALADP-RWYSTQV 196 (596)
Q Consensus 122 ~~~~yDp~t~~w~-~l~~~-~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~--~W~~~~~~M~~~-R~y~s~~ 196 (596)
...+||..+.+-. .+... +........+.+||+++++|+.+ ..+++||.. +. ....... +... ..-.+++
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~vw~~~-~~~~~~~~~~~-~~~h~~~v~~~~ 120 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN---GSLELYSTN-EANNAINSMAR-FSNHSSSVKTVK 120 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS---SCEEEECCS-STTSCCCEEEE-CCCSSSCCCEEE
T ss_pred eEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC---CeEEEeecc-cccccccchhh-ccCCccceEEEE
Confidence 3678888776432 22111 12122223456789999998764 468899976 41 1111111 2211 1122344
Q ss_pred EccC-CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCC-CcEEEEecc
Q 035640 197 TLPD-GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPD-GNLFIFSNN 273 (596)
Q Consensus 197 ~L~d-G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~d-G~Ifv~Gg~ 273 (596)
..++ +++++.|+.++ .+.+| ..+.+-... ...+........ . ..... .+...++ +++++.|+.
T Consensus 121 ~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~-~~~~~~~~~~~~----~-------~~~v~-~~~~~~~~~~~l~~~~~ 186 (416)
T 2pm9_A 121 FNAKQDNVLASGGNNG-EIFIWDMNKCTESPS-NYTPLTPGQSMS----S-------VDEVI-SLAWNQSLAHVFASAGS 186 (416)
T ss_dssp ECSSSTTBEEEECSSS-CEEBCBTTTTSSCTT-TCCCBCCCCSCC----S-------SCCCC-EEEECSSCTTEEEEESS
T ss_pred EcCCCCCEEEEEcCCC-eEEEEECCCCccccc-cccccccccccC----C-------CCCee-EEEeCCCCCcEEEEEcC
Confidence 5556 78888888654 45565 333210000 000000000000 0 00001 2233466 788888875
Q ss_pred e--eEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCce
Q 035640 274 R--SILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDC 351 (596)
Q Consensus 274 ~--~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~ 351 (596)
+ ..+||..+.+....+.. ..........-.++. ..| .+.+++++|+.+ +. ...+
T Consensus 187 dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~v~~~~--~~~-------~~~~~l~~~~~d-~~-------------~~~i 242 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSY-TSPNSGIKQQLSVVE--WHP-------KNSTRVATATGS-DN-------------DPSI 242 (416)
T ss_dssp SSCEEEEETTTTEEEEEECC-CCCSSCCCCCEEEEE--ECS-------SCTTEEEEEECC-SS-------------SCCC
T ss_pred CCCEEEEECCCCCcceEEec-cccccccCCceEEEE--ECC-------CCCCEEEEEECC-CC-------------CceE
Confidence 4 67899988775533321 100000000111111 111 123577777644 10 0134
Q ss_pred EEEEeeCCCCceEeecCC--CCccccceEEeC-CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCce-EEecCC
Q 035640 352 GRIDITKPNAVWKKERMP--SPRVMGDMVILP-TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRF-KELAAG 427 (596)
Q Consensus 352 ~~id~~~~~~~W~~~~M~--~~R~~~~avvLp-dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~W-t~~a~~ 427 (596)
..+|+... .-....+. ....-.+....| +++++++|+.+ | ++.+||..+. +- ..+...
T Consensus 243 ~~~d~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g------------~v~~wd~~~~---~~~~~~~~~ 304 (416)
T 2pm9_A 243 LIWDLRNA--NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-N------------TVLLWNPESA---EQLSQFPAR 304 (416)
T ss_dssp CEEETTST--TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-S------------EEEEECSSSC---CEEEEEECS
T ss_pred EEEeCCCC--CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-C------------CEEEeeCCCC---ccceeecCC
Confidence 45666521 11111222 111112223356 89999998864 1 5789998776 32 222211
Q ss_pred CcccccceEEEEcCCC-cEEEecCCC
Q 035640 428 TIPRMYHSSSVLLPDG-TVLVAGSNT 452 (596)
Q Consensus 428 ~~~R~yhs~a~LlpDG-~Vlv~GG~~ 452 (596)
. ..-......||| +++++|+..
T Consensus 305 ~---~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 305 G---NWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp S---SCCCCEEECTTCTTEEEECCSS
T ss_pred C---CceEEEEECCCCCCEEEEEecC
Confidence 1 111234457898 899998864
No 75
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.28 E-value=0.52 Score=46.41 Aligned_cols=68 Identities=16% Similarity=0.002 Sum_probs=36.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCC-CCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCD-GCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~-t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
..+.+||+.+++++..+ ..+.+|+... +.++..+.. +.....-...+.-+||+.+++++.....+.+|
T Consensus 43 ~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAE-SALPGSLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp EEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEE-EECSSCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEeecCC--CeEEEEEecCCCCceeeccc-cccCCCCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 34567898666665542 4677766430 445654432 32222233455567888555555444456666
No 76
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.27 E-value=0.85 Score=43.58 Aligned_cols=226 Identities=15% Similarity=0.159 Sum_probs=111.2
Q ss_pred eecCCCcEEE-EcCCCCCCCeEEEEeCCCCCceeecCc-CCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCC
Q 035640 148 GLTADGDLVS-TGGFGGGANTVRYLSTCDGCDWREYPT-ALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSN 224 (596)
Q Consensus 148 ~~l~dG~ilv-~GG~~~g~~~v~~fdP~~t~~W~~~~~-~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~ 224 (596)
++..+|++|+ .... ...+.+||+. +........ .+..+ .+.+.-++|++||... ...+..| +.....
T Consensus 30 ~~~~~g~l~v~~~~~---~~~i~~~~~~-~~~~~~~~~~~~~~p---~~i~~~~~g~l~v~~~--~~~i~~~d~~~~~~- 99 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGM---YGRVVKLATG-STGTTVLPFNGLYQP---QGLAVDGAGTVYVTDF--NNRVVTLAAGSNNQ- 99 (270)
T ss_dssp EECTTCCEEEEECSS---SCEEEEECC------EECCCCSCCSC---CCEEECTTCCEEEEET--TTEEEEECTTCSCC-
T ss_pred EECCCCCEEEEccCC---CCcEEEecCC-CcccceEeeCCcCCc---ceeEECCCCCEEEEcC--CCEEEEEeCCCceE-
Confidence 3456899998 5332 2568889986 544333211 12222 2455666899999876 3345556 443211
Q ss_pred CCcccccCcccccccCCCcCCcceeeeccCccceEEE-cCCCcEEEEec--ceeEEecCCCCeEEEeeccccCCCCCCCC
Q 035640 225 KSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYL-SPDGNLFIFSN--NRSILLDPKANKVVREFPILTGGSRNYPA 301 (596)
Q Consensus 225 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~-~~dG~Ifv~Gg--~~~e~yDp~t~~w~~~lp~mp~~~R~~p~ 301 (596)
...+. . ....|...+ .++|+||+... ....+||..+.... .... . .-..|
T Consensus 100 ---~~~~~--~-----------------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~-~--~~~~p- 152 (270)
T 1rwi_B 100 ---TVLPF--D-----------------GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPF-T--GLNDP- 152 (270)
T ss_dssp ---EECCC--C-----------------SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCC-C--SCCSC-
T ss_pred ---eeeec--C-----------------CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eecc-c--cCCCc-
Confidence 00100 0 001344443 46899998753 35677887665543 1211 1 11112
Q ss_pred CceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee---cCCCCccccceE
Q 035640 302 SAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE---RMPSPRVMGDMV 378 (596)
Q Consensus 302 ~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~---~M~~~R~~~~av 378 (596)
.+.++ ..+++||+..... ..+.++|+. +..-... .+..+ .+.+
T Consensus 153 ~~i~~------------~~~g~l~v~~~~~-----------------~~i~~~~~~--~~~~~~~~~~~~~~p---~~i~ 198 (270)
T 1rwi_B 153 DGVAV------------DNSGNVYVTDTDN-----------------NRVVKLEAE--SNNQVVLPFTDITAP---WGIA 198 (270)
T ss_dssp CCEEE------------CTTCCEEEEEGGG-----------------TEEEEECTT--TCCEEECCCSSCCSE---EEEE
T ss_pred eeEEE------------eCCCCEEEEECCC-----------------CEEEEEecC--CCceEeecccCCCCc---eEEE
Confidence 12222 1367788865321 234556653 2221111 22222 2234
Q ss_pred EeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCCCcccc
Q 035640 379 ILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTHNGYIL 458 (596)
Q Consensus 379 vLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~~~~~~ 458 (596)
+-++|+||+..... ..+.+||+.+. .-........ .......+-+||++|++....
T Consensus 199 ~d~~g~l~v~~~~~-------------~~v~~~~~~~~---~~~~~~~~~~--~~p~~i~~~~~g~l~v~~~~~------ 254 (270)
T 1rwi_B 199 VDEAGTVYVTEHNT-------------NQVVKLLAGST---TSTVLPFTGL--NTPLAVAVDSDRTVYVADRGN------ 254 (270)
T ss_dssp ECTTCCEEEEETTT-------------SCEEEECTTCS---CCEECCCCSC--SCEEEEEECTTCCEEEEEGGG------
T ss_pred ECCCCCEEEEECCC-------------CcEEEEcCCCC---cceeeccCCC--CCceeEEECCCCCEEEEECCC------
Confidence 45789999976432 14678998775 3222211111 112233456899999987542
Q ss_pred CCCCCCcceEEEEcCCC
Q 035640 459 DAKYPTELRVEKFSPPY 475 (596)
Q Consensus 459 ~~~~p~~~~vE~y~Ppy 475 (596)
.+|.+|..+.
T Consensus 255 -------~~v~~~~~~~ 264 (270)
T 1rwi_B 255 -------DRVVKLTSLE 264 (270)
T ss_dssp -------TEEEEECCCG
T ss_pred -------CEEEEEcCCC
Confidence 2577776554
No 77
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.25 E-value=0.86 Score=43.53 Aligned_cols=132 Identities=15% Similarity=0.130 Sum_probs=65.8
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG 202 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~ 202 (596)
...||+.+...............+.++.++|++|+... . ..+.+||+. +....... ......-.+.+.-++|+
T Consensus 48 i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~---~~i~~~d~~-~~~~~~~~--~~~~~~p~~i~~~~~g~ 120 (270)
T 1rwi_B 48 VVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-N---NRVVTLAAG-SNNQTVLP--FDGLNYPEGLAVDTQGA 120 (270)
T ss_dssp EEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-T---TEEEEECTT-CSCCEECC--CCSCSSEEEEEECTTCC
T ss_pred EEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-C---CEEEEEeCC-CceEeeee--cCCcCCCcceEECCCCC
Confidence 45677766655444322111222344556899998865 2 468999987 54433322 11112222455556899
Q ss_pred EEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceE-EEcCCCcEEEEec--ceeEEe
Q 035640 203 FIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFV-YLSPDGNLFIFSN--NRSILL 278 (596)
Q Consensus 203 VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~-~~~~dG~Ifv~Gg--~~~e~y 278 (596)
+|+....+ ..+..+ +.+... ..... . ....|.. ..-++|+||+... ....+|
T Consensus 121 l~v~~~~~-~~i~~~~~~~~~~----~~~~~---~----------------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 121 VYVADRGN-NRVVKLAAGSKTQ----TVLPF---T----------------GLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp EEEEEGGG-TEEEEECTTCCSC----EECCC---C----------------SCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred EEEEECCC-CEEEEEECCCcee----Eeecc---c----------------cCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 99975432 234455 222110 00000 0 0012333 3446899998764 457789
Q ss_pred cCCCCeE
Q 035640 279 DPKANKV 285 (596)
Q Consensus 279 Dp~t~~w 285 (596)
|+.+...
T Consensus 177 ~~~~~~~ 183 (270)
T 1rwi_B 177 EAESNNQ 183 (270)
T ss_dssp CTTTCCE
T ss_pred ecCCCce
Confidence 9887764
No 78
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.63 Score=47.18 Aligned_cols=63 Identities=14% Similarity=0.013 Sum_probs=37.2
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
..+.+||+++++|+.+ ..+.+||.. ......+.. ....-.+.+..++|+.++.|+.++ .+.+|
T Consensus 114 ~~~s~~~~~l~~~~~d---g~i~i~~~~-~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw 176 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVEN---GELRLWNKT-GALLNVLNF---HRAPIVSVKWNKDGTHIISMDVEN-VTILW 176 (425)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEETT-SCEEEEECC---CCSCEEEEEECTTSSEEEEEETTC-CEEEE
T ss_pred EEEcCCCCEEEEEeCC---CeEEEEeCC-CCeeeeccC---CCccEEEEEECCCCCEEEEEecCC-eEEEE
Confidence 3456799999998864 458899954 332222211 112223455567898888887654 34455
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.24 E-value=0.12 Score=52.38 Aligned_cols=89 Identities=10% Similarity=0.055 Sum_probs=49.0
Q ss_pred EEEEeCCCCCEEeCcCCC--ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCc-eeecCcCCC-CcccccEEEEc
Q 035640 123 SVLFDFETSELTALKLQT--DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCD-WREYPTALA-DPRWYSTQVTL 198 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~--~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~-W~~~~~~M~-~~R~y~s~~~L 198 (596)
..+||..++.|..+.... ........+.++|+.+++|+.+ ..+++||.. +.+ |..... +. ....-.+++..
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~-~~~~~~~~~~-~~~~~~~v~~~~~~ 109 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKR-PDGTWKQTLV-LLRLNRAATFVRWS 109 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SSEEEC-------CCCCEEE-CCCCSSCEEEEECC
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcC-CCCceeeeeE-ecccCCceEEEEEC
Confidence 457788777766665432 2222234556789999998864 468899987 554 443321 22 22222334445
Q ss_pred cCCcEEEEcCCCCCcEEEe
Q 035640 199 PDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 199 ~dG~VyViGG~~~~~~E~y 217 (596)
+||+.++.|+.++ .+.+|
T Consensus 110 ~~~~~l~~~~~d~-~i~iw 127 (377)
T 3dwl_C 110 PNEDKFAVGSGAR-VISVC 127 (377)
T ss_dssp TTSSCCEEEESSS-CEEEC
T ss_pred CCCCEEEEEecCC-eEEEE
Confidence 6889888888654 45555
No 80
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.22 E-value=2.4 Score=48.21 Aligned_cols=249 Identities=10% Similarity=0.043 Sum_probs=123.8
Q ss_pred EEEEeCCCCCEEeCcC---CCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcC-CCCcccccEEEEc
Q 035640 123 SVLFDFETSELTALKL---QTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTA-LADPRWYSTQVTL 198 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~---~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~-M~~~R~y~s~~~L 198 (596)
..+||+.+++++.... .......+.....+|+|++ |... ..+.+||+. +.+++..... +.... -.+.+.-
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~---~Gl~~~~~~-~~~~~~~~~~~~~~~~-v~~i~~d 458 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL---GNISYYNTR-LKKFQIIELEKNELLD-VRVFYED 458 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT---EEEEEECSS-SCEEEECCSTTTCCCC-EEEEEEC
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc---CCEEEEcCC-CCcEEEeccCCCCCCe-EEEEEEC
Confidence 4567887776665421 1111111112234788887 3222 357889998 7888766421 22222 1233344
Q ss_pred cCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccce-EEEcCCCcEEEEec-cee
Q 035640 199 PDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF-VYLSPDGNLFIFSN-NRS 275 (596)
Q Consensus 199 ~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~~~~dG~Ifv~Gg-~~~ 275 (596)
.+|++++... ..+-+| +.+++|.. ....... . ....+.. ...-.+|+|++... ...
T Consensus 459 ~~g~lwigt~---~Gl~~~~~~~~~~~~----~~~~~~~--~------------~~~~~i~~i~~d~~g~lWigt~~~Gl 517 (781)
T 3v9f_A 459 KNKKIWIGTH---AGVFVIDLASKKVIH----HYDTSNS--Q------------LLENFVRSIAQDSEGRFWIGTFGGGV 517 (781)
T ss_dssp TTSEEEEEET---TEEEEEESSSSSCCE----EECTTTS--S------------CSCSCEEEEEECTTCCEEEEESSSCE
T ss_pred CCCCEEEEEC---CceEEEeCCCCeEEe----cccCccc--c------------cccceeEEEEEcCCCCEEEEEcCCCE
Confidence 4688887432 234556 76665531 1000000 0 0001112 22346899988764 567
Q ss_pred EEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEE
Q 035640 276 ILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRID 355 (596)
Q Consensus 276 e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id 355 (596)
.+||+.++++. .+..-.+ .+......++ ...+++|++... . |- +.++|
T Consensus 518 ~~~~~~~~~~~-~~~~~~~----l~~~~i~~i~---------~d~~g~lWi~T~-~-Gl----------------v~~~d 565 (781)
T 3v9f_A 518 GIYTPDMQLVR-KFNQYEG----FCSNTINQIY---------RSSKGQMWLATG-E-GL----------------VCFPS 565 (781)
T ss_dssp EEECTTCCEEE-EECTTTT----CSCSCEEEEE---------ECTTSCEEEEET-T-EE----------------EEESC
T ss_pred EEEeCCCCeEE-EccCCCC----CCCCeeEEEE---------ECCCCCEEEEEC-C-Cc----------------eEEEC
Confidence 88999998875 4432110 1111111111 113677776432 1 10 12333
Q ss_pred eeCCCCceEe---e-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecC---CC
Q 035640 356 ITKPNAVWKK---E-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAA---GT 428 (596)
Q Consensus 356 ~~~~~~~W~~---~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~---~~ 428 (596)
+. +.+++. . .|+..... +.+.-.+|+|++.+.. | +.+|||++. +++.... ++
T Consensus 566 ~~--~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lW~~t~~--G-------------l~~~~~~~~---~~~~~~~~dGl~ 624 (781)
T 3v9f_A 566 AR--NFDYQVFQRKEGLPNTHIR-AISEDKNGNIWASTNT--G-------------ISCYITSKK---CFYTYDHSNNIP 624 (781)
T ss_dssp TT--TCCCEEECGGGTCSCCCCC-EEEECSSSCEEEECSS--C-------------EEEEETTTT---EEEEECGGGTCC
T ss_pred CC--CCcEEEccccCCCCCceEE-EEEECCCCCEEEEcCC--c-------------eEEEECCCC---ceEEecccCCcc
Confidence 32 333332 1 35544433 2344567999886421 1 368999998 7776543 33
Q ss_pred cccccceEEEEcCCCcEEEecCC
Q 035640 429 IPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 429 ~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
.......+++..+||++|++|.+
T Consensus 625 ~~~f~~~~~~~~~~G~l~~g~~~ 647 (781)
T 3v9f_A 625 QGSFISGCVTKDHNGLIYFGSIN 647 (781)
T ss_dssp SSCEEEEEEEECTTSCEEEEETT
T ss_pred ccccccCceEECCCCEEEEECCC
Confidence 33333345666789999998764
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.21 E-value=0.39 Score=49.92 Aligned_cols=82 Identities=11% Similarity=0.125 Sum_probs=49.3
Q ss_pred eEEEEeCCCCCEEeCcCC--CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEcc
Q 035640 122 HSVLFDFETSELTALKLQ--TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLP 199 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~--~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~ 199 (596)
.+.+||..|++...+-.. +...-....+.+||+.+++|+.+ ..+++||.. +.+-... +........+.. .
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~-~~~~~~~---~~~h~~~v~~~s-~ 197 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ-QQKRLRN---MTSHSARVGSLS-W 197 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT-TTEEEEE---ECCCSSCEEEEE-E
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcC-CCcEEEE---EeCCCCceEEEe-e
Confidence 477888888877654322 12122224456899999999865 468999987 5543221 222222222333 3
Q ss_pred CCcEEEEcCCCC
Q 035640 200 DGGFIVVGGRGA 211 (596)
Q Consensus 200 dG~VyViGG~~~ 211 (596)
|+++++.|+.+.
T Consensus 198 ~~~~l~sgs~d~ 209 (420)
T 4gga_A 198 NSYILSSGSRSG 209 (420)
T ss_dssp ETTEEEEEETTS
T ss_pred CCCEEEEEeCCC
Confidence 889999888654
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.19 E-value=0.41 Score=53.98 Aligned_cols=87 Identities=13% Similarity=0.178 Sum_probs=51.6
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-cccccEEEEccCC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-PRWYSTQVTLPDG 201 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-~R~y~s~~~L~dG 201 (596)
..+||..+++....-..+........+.+||+.+++|+.+ ..+.+||.. +.+.... +.. ...-.+.+.-+||
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~-~~~~~~~---~~~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN-TGEKVVD---FEAHPDYIRSIAVHPTK 109 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT-TCCEEEE---EECCSSCEEEEEECSSS
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC---CeEEEEECC-CCcEEEE---EecCCCCEEEEEEeCCC
Confidence 6778877765433222222233334567799999999864 578999987 5554321 221 1222244556689
Q ss_pred cEEEEcCCCCCcEEEe
Q 035640 202 GFIVVGGRGAFSYEYI 217 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y 217 (596)
+.+++|+.+ ..+.+|
T Consensus 110 ~~l~~~~~d-g~i~vw 124 (814)
T 3mkq_A 110 PYVLSGSDD-LTVKLW 124 (814)
T ss_dssp SEEEEEETT-SEEEEE
T ss_pred CEEEEEcCC-CEEEEE
Confidence 888888765 345566
No 83
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.06 E-value=1.2 Score=47.84 Aligned_cols=242 Identities=14% Similarity=0.204 Sum_probs=118.5
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG 202 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~ 202 (596)
..+||........+.... .......+.+||+.+++|+.+ ..++++|.. ...-..+.. ....-.+++..+||+
T Consensus 286 i~~w~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~-~~~~~~~~~---~~~~v~~~~~s~~g~ 357 (577)
T 2ymu_A 286 VKLWNRNGQLLQTLTGHS-SSVWGVAFSPDGQTIASASDD---KTVKLWNRN-GQHLQTLTG---HSSSVWGVAFSPDGQ 357 (577)
T ss_dssp EEEEETTSCEEEEECCCS-SCEEEEEECTTSSEEEEEETT---SCEEEEETT-SCEEEEECC---CSSCEEEEEECTTSS
T ss_pred EEEEeCCCcEEEEEecCC-CCeEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCeeEEEeC---CCCCEEEEEECCCCC
Confidence 566776544444333211 111123456799999988754 468889865 433222211 111112455667999
Q ss_pred EEEEcCCCCCcEEEeCCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEecC
Q 035640 203 FIVVGGRGAFSYEYIPPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILLDP 280 (596)
Q Consensus 203 VyViGG~~~~~~E~yP~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~yDp 280 (596)
.++.|+.++ .+.+|..+.+ .+..+.... .. --.+...+||+.++.|+.+ ..+||.
T Consensus 358 ~l~~~~~dg-~v~~~~~~~~------~~~~~~~~~---------------~~-v~~~~~s~dg~~l~~~~~d~~v~~~~~ 414 (577)
T 2ymu_A 358 TIASASDDK-TVKLWNRNGQ------LLQTLTGHS---------------SS-VRGVAFSPDGQTIASASDDKTVKLWNR 414 (577)
T ss_dssp EEEEEETTS-EEEEEETTCC------EEEEEECCS---------------SC-EEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEEEEeCCC-EEEEEcCCCC------EEEEecCCC---------------CC-eEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 999887653 4556632210 010010000 00 0012345799988888753 567885
Q ss_pred CCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCC
Q 035640 281 KANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPN 360 (596)
Q Consensus 281 ~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~ 360 (596)
.... .+.+ .+ ... .-.++.+ . .+++.+++++.+ ..+..+|.. .
T Consensus 415 ~~~~-~~~~---~~-~~~---~v~~~~~--s--------~d~~~l~~~~~d-----------------~~v~~w~~~--~ 457 (577)
T 2ymu_A 415 NGQL-LQTL---TG-HSS---SVWGVAF--S--------PDDQTIASASDD-----------------KTVKLWNRN--G 457 (577)
T ss_dssp TCCE-EEEE---EC-CSS---CEEEEEE--C--------TTSSEEEEEETT-----------------SEEEEEETT--S
T ss_pred CCCE-EEEe---cC-CCC---CeEEEEE--C--------CCCCEEEEEcCC-----------------CEEEEEECC--C
Confidence 4433 2222 21 111 1111111 1 256677777654 123344532 1
Q ss_pred CceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEc
Q 035640 361 AVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLL 440 (596)
Q Consensus 361 ~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~Ll 440 (596)
..-....-...... +...-|||+++++++.+. ++.+||.... .-..+.... .+ -.....-
T Consensus 458 ~~~~~~~~~~~~v~-~~~~spd~~~las~~~d~-------------~i~iw~~~~~---~~~~~~~h~-~~--v~~l~~s 517 (577)
T 2ymu_A 458 QLLQTLTGHSSSVR-GVAFSPDGQTIASASDDK-------------TVKLWNRNGQ---LLQTLTGHS-SS--VRGVAFS 517 (577)
T ss_dssp CEEEEEECCSSCEE-EEEECTTSCEEEEEETTS-------------EEEEEETTSC---EEEEEECCS-SC--EEEEEEC
T ss_pred CEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCC-------------EEEEEcCCCC---EEEEEeCCC-CC--EEEEEEc
Confidence 11111121222222 234578999999987641 5789995433 333322111 11 1223457
Q ss_pred CCCcEEEecCCC
Q 035640 441 PDGTVLVAGSNT 452 (596)
Q Consensus 441 pDG~Vlv~GG~~ 452 (596)
|||+.+++|+..
T Consensus 518 ~dg~~l~s~~~d 529 (577)
T 2ymu_A 518 PDGQTIASASDD 529 (577)
T ss_dssp TTSSCEEEEETT
T ss_pred CCCCEEEEEECc
Confidence 999999998864
No 84
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.05 E-value=1.4 Score=44.23 Aligned_cols=27 Identities=11% Similarity=0.325 Sum_probs=18.0
Q ss_pred EEEcCCCc-EEEEe--cceeEEecCCCCeE
Q 035640 259 VYLSPDGN-LFIFS--NNRSILLDPKANKV 285 (596)
Q Consensus 259 ~~~~~dG~-Ifv~G--g~~~e~yDp~t~~w 285 (596)
....+||+ ||+.. +....+||..+++.
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 34468997 66665 24577888877765
No 85
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.05 E-value=0.079 Score=60.45 Aligned_cols=244 Identities=14% Similarity=0.107 Sum_probs=118.4
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEE-ccC--CcEEEEcCCCCCcEEEe-CCCCCCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVT-LPD--GGFIVVGGRGAFSYEYI-PPEGQSN 224 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~-L~d--G~VyViGG~~~~~~E~y-P~~~~w~ 224 (596)
+.+||+.+++||.+ ..+++||.. ..++..... +...+..-..+. .++ |+.++.|+.++ .+.+| ..+++|.
T Consensus 17 ~s~dg~~latg~~d---g~I~vwd~~-~~~~~~~~~-l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-~I~vwd~~~~~~~ 90 (753)
T 3jro_A 17 LDYYGKRLATCSSD---KTIKIFEVE-GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENGRWS 90 (753)
T ss_dssp CCSSSCCEEEEETT---TEEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEECCTTSCSEEEEEETTS-CEEEEEEETTEEE
T ss_pred ECCCCCeEEEEECC---CcEEEEecC-CCCCcccee-ccCCcCceEEEEecCCCCCCEEEEEeCCC-eEEEEECCCCccc
Confidence 34578888888764 468899876 556655432 432222222333 345 88999888764 35555 3333211
Q ss_pred CCcccccCcccccccCCCcCCcceeeeccCccceEEEcCC--CcEEEEecce--eEEecCCCCeEEEeeccccCCCCCCC
Q 035640 225 KSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPD--GNLFIFSNNR--SILLDPKANKVVREFPILTGGSRNYP 300 (596)
Q Consensus 225 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~d--G~Ifv~Gg~~--~e~yDp~t~~w~~~lp~mp~~~R~~p 300 (596)
....+.... ... -.+...++ |++++.|+.+ ..+||..++.-.... .+.. ...
T Consensus 91 ----~~~~~~~h~---------------~~V-~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-~~~~-~~~-- 146 (753)
T 3jro_A 91 ----QIAVHAVHS---------------ASV-NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDA-HAI-- 146 (753)
T ss_dssp ----EEEEECCCS---------------SCE-EEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-EEEC-CSS--
T ss_pred ----ccccccCCC---------------CCe-EEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-Eeec-CCC--
Confidence 000000000 000 01223466 8888888764 567887765211000 0111 000
Q ss_pred CCceEE-ecccc--ccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccc-c
Q 035640 301 ASAMSV-LLPLK--LRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVM-G 375 (596)
Q Consensus 301 ~~g~av-~lpl~--~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~-~ 375 (596)
.-.++ ..|.. +........+++++++|+.+ ..+..+|+......+... .+...... .
T Consensus 147 -~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d-----------------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 147 -GVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp -CEEEEEECCCC---------CGGGCCEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred -ceEEEEecCcccccccccccCCCCCEEEEEECC-----------------CeEEEEeccCCcccceeeeeecCCCCcEE
Confidence 00111 11100 00000000146677777754 235667776544555554 33322211 2
Q ss_pred ceEEeCC---CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCC
Q 035640 376 DMVILPT---EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 376 ~avvLpd---G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
+...-|+ |++++.||.+ | .+.+||..+.....-..+.........-.....-|||+.+++||..
T Consensus 209 ~l~~sp~~~~~~~l~s~s~D-g------------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D 275 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (753)
T ss_dssp EEEECCCCSSSEEEEEEESS-S------------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS
T ss_pred EEEeccCCCCCCEEEEEecC-C------------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC
Confidence 2345688 8999999865 1 4689998876221111111111111112234456899999998865
Q ss_pred C
Q 035640 453 H 453 (596)
Q Consensus 453 ~ 453 (596)
.
T Consensus 276 g 276 (753)
T 3jro_A 276 N 276 (753)
T ss_dssp S
T ss_pred C
Confidence 4
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.00 E-value=0.93 Score=45.90 Aligned_cols=209 Identities=12% Similarity=0.122 Sum_probs=104.5
Q ss_pred CcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcE-EEEcCCCCCcEEEe-CCCCCCCCCcccc
Q 035640 153 GDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGF-IVVGGRGAFSYEYI-PPEGQSNKSPVFF 230 (596)
Q Consensus 153 G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~V-yViGG~~~~~~E~y-P~~~~w~~~~~~~ 230 (596)
+.+|++|+.+ ..+++||.. +.+-... +.....-.+++.-+||+. |+.|+.+ ..+.+| ..+++. .
T Consensus 2 ~~l~vs~~~d---~~v~v~d~~-~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~d-~~i~v~d~~~~~~------~ 67 (391)
T 1l0q_A 2 TFAYIANSES---DNISVIDVT-SNKVTAT---IPVGSNPMGAVISPDGTKVYVANAHS-NDVSIIDTATNNV------I 67 (391)
T ss_dssp EEEEEEETTT---TEEEEEETT-TTEEEEE---EECSSSEEEEEECTTSSEEEEEEGGG-TEEEEEETTTTEE------E
T ss_pred CEEEEEcCCC---CEEEEEECC-CCeEEEE---eecCCCcceEEECCCCCEEEEECCCC-CeEEEEECCCCeE------E
Confidence 4677887654 579999987 5543321 222222234555678874 5555433 456666 443311 0
Q ss_pred cCcccccccCCCcCCcceeeeccCccce-EEEcCCCc-EEEEec--ceeEEecCCCCeEEEeeccccCCCCCCCCCceEE
Q 035640 231 PLLKDTTNDLKGIDGQEMFLIENNLYPF-VYLSPDGN-LFIFSN--NRSILLDPKANKVVREFPILTGGSRNYPASAMSV 306 (596)
Q Consensus 231 p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~~~~dG~-Ifv~Gg--~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av 306 (596)
..+.. ...+. +...++|+ ||+.+. ....+||..+++....+. . ... -..+
T Consensus 68 ~~~~~------------------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~-~~~----~~~~ 121 (391)
T 1l0q_A 68 ATVPA------------------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---T-GKS----PLGL 121 (391)
T ss_dssp EEEEC------------------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---C-SSS----EEEE
T ss_pred EEEEC------------------CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---C-CCC----cceE
Confidence 00000 00122 23457887 555553 357889999887653332 1 111 1122
Q ss_pred eccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCeE
Q 035640 307 LLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTEDI 385 (596)
Q Consensus 307 ~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~V 385 (596)
.+ .+ ....||++++.+ ..+..+|+. +.+.... .... .. ......|||+.
T Consensus 122 ~~--s~-------dg~~l~~~~~~~-----------------~~v~~~d~~--~~~~~~~~~~~~-~~-~~~~~~~dg~~ 171 (391)
T 1l0q_A 122 AL--SP-------DGKKLYVTNNGD-----------------KTVSVINTV--TKAVINTVSVGR-SP-KGIAVTPDGTK 171 (391)
T ss_dssp EE--CT-------TSSEEEEEETTT-----------------TEEEEEETT--TTEEEEEEECCS-SE-EEEEECTTSSE
T ss_pred EE--CC-------CCCEEEEEeCCC-----------------CEEEEEECC--CCcEEEEEecCC-Cc-ceEEECCCCCE
Confidence 11 11 234566776533 245566664 3333322 2221 11 23355788875
Q ss_pred E-EEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecC
Q 035640 386 L-LLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGS 450 (596)
Q Consensus 386 ~-vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG 450 (596)
+ +.++.+ ..+.+||..+. +....-.. .. ......+-|||+.+++++
T Consensus 172 l~~~~~~~-------------~~v~~~d~~~~---~~~~~~~~--~~-~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 172 VYVANFDS-------------MSISVIDTVTN---SVIDTVKV--EA-APSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp EEEEETTT-------------TEEEEEETTTT---EEEEEEEC--SS-EEEEEEECTTSSEEEEEE
T ss_pred EEEEeCCC-------------CEEEEEECCCC---eEEEEEec--CC-CccceEECCCCCEEEEEe
Confidence 5 555432 15789999887 54332221 11 122345678998666665
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.00 E-value=1 Score=43.55 Aligned_cols=89 Identities=11% Similarity=0.114 Sum_probs=46.6
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG 202 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~ 202 (596)
..+||..+.+....-..+........+.++++.+++|+.+ ..+++||............ +............ +++
T Consensus 41 v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~-~~~ 115 (313)
T 3odt_A 41 VRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFATSGEDPLYT-LIGHQGNVCSLSF-QDG 115 (313)
T ss_dssp EEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTCCTTSCC-CE-ECCCSSCEEEEEE-ETT
T ss_pred EEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeeecCCCCcccc-hhhcccCEEEEEe-cCC
Confidence 5677776655433322222233334566799999999864 3577777641111222211 3222222333444 788
Q ss_pred EEEEcCCCCCcEEEe
Q 035640 203 FIVVGGRGAFSYEYI 217 (596)
Q Consensus 203 VyViGG~~~~~~E~y 217 (596)
.++.|+.++ .+.+|
T Consensus 116 ~l~~~~~d~-~i~~~ 129 (313)
T 3odt_A 116 VVISGSWDK-TAKVW 129 (313)
T ss_dssp EEEEEETTS-EEEEE
T ss_pred EEEEEeCCC-CEEEE
Confidence 888887654 34444
No 88
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.96 E-value=0.34 Score=53.08 Aligned_cols=280 Identities=10% Similarity=0.055 Sum_probs=136.3
Q ss_pred eEEEEeCCCCCEEeC-cCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeC--CCCCceeecCcCCCCcccccEEEEc
Q 035640 122 HSVLFDFETSELTAL-KLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLST--CDGCDWREYPTALADPRWYSTQVTL 198 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l-~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP--~~t~~W~~~~~~M~~~R~y~s~~~L 198 (596)
.+.+||..+++.... ..-.. ..+..+.+||+.+.+++.+ ..+.+||. . +.+- ... +....+-.+++.-
T Consensus 160 ~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~-t~~~--~~~-i~~g~~p~~va~s 230 (543)
T 1nir_A 160 QIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRD---ARIDMIDLWAK-EPTK--VAE-IKIGIEARSVESS 230 (543)
T ss_dssp EEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETT---SEEEEEETTSS-SCEE--EEE-EECCSEEEEEEEC
T ss_pred eEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCC---CeEEEEECcCC-CCcE--EEE-EecCCCcceEEeC
Confidence 367889988876432 21122 2334567899887777654 67999998 5 4432 222 4444443345555
Q ss_pred c----CCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccce-EEEcCCCcEEEEec
Q 035640 199 P----DGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF-VYLSPDGNLFIFSN 272 (596)
Q Consensus 199 ~----dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~~~~dG~Ifv~Gg 272 (596)
+ ||+.+.++.....++.+| ..+.+-. ..++....+. +.++ |. +.. .+. ....++++.|++..
T Consensus 231 p~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~---~~i~~~g~~~------~~~~-~~-~~~-~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 231 KFKGYEDRYTIAGAYWPPQFAIMDGETLEPK---QIVSTRGMTV------DTQT-YH-PEP-RVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp CSTTCTTTEEEEEEEESSEEEEEETTTCCEE---EEEECCEECS------SSCC-EE-SCC-CEEEEEECSSSSEEEEEE
T ss_pred CCcCCCCCEEEEEEccCCeEEEEeccccccc---eeecccCccc------Cccc-cc-cCC-ceEEEEECCCCCEEEEEE
Confidence 6 898777776555566666 4332100 0111100000 0000 00 000 112 23446666555543
Q ss_pred ---ceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCE-EEEEcCccCCccccccccccccCCC
Q 035640 273 ---NRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAK-VLVCGGAQWDSFYFSETKKQFFPAL 348 (596)
Q Consensus 273 ---~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gk-I~v~GG~~~~~~~~~~~~~~~~~a~ 348 (596)
....++|..+.+... +..++. . .+|.. .+ +- -+++ +|+++.. .
T Consensus 299 ~~~g~i~vvd~~~~~~l~-~~~i~~-~-~~~~~-~~-~s-----------pdg~~l~va~~~-----------------~ 345 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLT-VTSIGA-A-PFLHD-GG-WD-----------SSHRYFMTAANN-----------------S 345 (543)
T ss_dssp TTTTEEEEEECTTSSSCE-EEEEEC-C-SSCCC-EE-EC-----------TTSCEEEEEEGG-----------------G
T ss_pred CCCCeEEEEEecCCCcce-eEEecc-C-cCccC-ce-EC-----------CCCCEEEEEecC-----------------C
Confidence 246677876543211 111221 1 12221 12 11 2455 5554322 1
Q ss_pred CceEEEEeeCCCCceEee----cCCCCccccceEEeCC-CeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCC--CCce
Q 035640 349 QDCGRIDITKPNAVWKKE----RMPSPRVMGDMVILPT-EDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPS--RQRF 421 (596)
Q Consensus 349 ~s~~~id~~~~~~~W~~~----~M~~~R~~~~avvLpd-G~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~--g~~W 421 (596)
+++..+|.. +.+-... .+|++-...+ ..-|+ |++|+.+.... .++-+||.++.. ...|
T Consensus 346 ~~v~v~D~~--tg~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~d------------~~V~v~d~~~~~~~~~~~ 410 (543)
T 1nir_A 346 NKVAVIDSK--DRRLSALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLGD------------GSISLIGTDPKNHPQYAW 410 (543)
T ss_dssp TEEEEEETT--TTEEEEEEECSSSBCCTTCEE-EEETTTEEEEEEEBSSS------------SEEEEEECCTTTCTTTBT
T ss_pred CeEEEEECC--CCeEEEeeccCCCCCCCCCcc-cCCCCCccEEEeccCCC------------ceEEEEEeCCCCCchhcC
Confidence 345567765 3332221 3444422222 34576 89998874321 156788876631 1237
Q ss_pred EEecCCCccccc-ceEEEEcCCCcEEEecCCCCCccccCCCCCCcceEEEEcCCCCC
Q 035640 422 KELAAGTIPRMY-HSSSVLLPDGTVLVAGSNTHNGYILDAKYPTELRVEKFSPPYLD 477 (596)
Q Consensus 422 t~~a~~~~~R~y-hs~a~LlpDG~Vlv~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl~ 477 (596)
+.+..+...-.. ..++ .-|||+-+.++...+.+... ..+|.+|+...+.
T Consensus 411 ~~v~~l~~~g~~~~~v~-~~pdg~~l~v~~~~~~~~~~------~~~v~v~d~~~~~ 460 (543)
T 1nir_A 411 KKVAELQGQGGGSLFIK-THPKSSHLYVDTTFNPDARI------SQSVAVFDLKNLD 460 (543)
T ss_dssp SEEEEEECSCSCCCCEE-CCTTCCEEEECCTTCSSHHH------HTCEEEEETTCTT
T ss_pred eEEEEEEcCCCCceEEE-cCCCCCcEEEecCCCCCccc------CceEEEEECCCCC
Confidence 766665543222 2233 46899888887643221000 2378889887763
No 89
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.95 E-value=1.1 Score=44.04 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=38.7
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEc-c--CCcEEEEcCCCCCcEEEe-CCCCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTL-P--DGGFIVVGGRGAFSYEYI-PPEGQ 222 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L-~--dG~VyViGG~~~~~~E~y-P~~~~ 222 (596)
+.+||+.+++|+.+ ..+++||.. ..+...... +......-..+.. + +|++++.|+.+ .++.+| ...++
T Consensus 17 ~s~~g~~las~s~D---~~v~iw~~~-~~~~~~~~~-l~gH~~~V~~v~~s~~~~g~~l~s~s~D-~~v~iWd~~~~~ 88 (297)
T 2pm7_B 17 MDYYGKRMATCSSD---KTIKIFEVE-GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYD-GKVMIWKEENGR 88 (297)
T ss_dssp ECTTSSEEEEEETT---SCEEEEEBC-SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETT-TEEEEEEBSSSC
T ss_pred ECCCCCEEEEEeCC---CEEEEEecC-CCCcEEEEE-EccccCCeEEEEecCCCcCCEEEEEcCC-CEEEEEEcCCCc
Confidence 44689999999865 568999975 433322211 3221111222332 2 38888888865 456677 54443
No 90
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.93 E-value=0.13 Score=52.14 Aligned_cols=60 Identities=18% Similarity=0.134 Sum_probs=40.6
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
...|+|++++.|+.+. ++.+||..++ +|.....+.-....-.....-|||+.++.|+...
T Consensus 157 ~~~p~~~~l~s~s~d~-------------~i~~w~~~~~---~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 157 VWHPSQELLASASYDD-------------TVKLYREEED---DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp EECSSSSCEEEEETTS-------------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCCEEEEEeCCC-------------cEEEEEecCC---CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 4468999999988651 5689998888 7765444332222223344579999999998754
No 91
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.91 E-value=1.2 Score=43.24 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=34.5
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCC
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGA 211 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~ 211 (596)
..+.++|+.+++|+.+ ..++++|.. +.+-...-. -...+. . +.-.++++++.|+.+.
T Consensus 73 v~~~~~~~~l~sgs~D---g~v~iw~~~-~~~~~~~~~-~h~~~~--~-~~~~~~~~l~s~~~~~ 129 (318)
T 4ggc_A 73 VAWIKEGNYLAVGTSS---AEVQLWDVQ-QQKRLRNMT-SHSARV--G-SLSWNSYILSSGSRSG 129 (318)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT-TTEEEEEEE-CCSSCE--E-EEEEETTEEEEEETTS
T ss_pred EEECCCCCEEEEEECC---CcEEEeecC-CceeEEEec-CccceE--E-EeecCCCEEEEEecCC
Confidence 4566799999999865 578999987 554322111 112221 2 2233678888877654
No 92
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.90 E-value=0.8 Score=47.62 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=50.9
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccCC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPDG 201 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~dG 201 (596)
..+||..+.+....-..+........+.++|..+++|+.+ ..+++||.. +...... +. ...+-..+..-+||
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~-~~~~~~~---~~~h~~~v~~~~~~~~g 246 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQ-TGYCVKT---FTGHREWVRMVRPNQDG 246 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT-TCCEEEE---EECCSSCEEEEEECTTS
T ss_pred EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECC-CCcEEEE---EeCCCccEEEEEECCCC
Confidence 4577776655433222222222234566789999998864 579999987 5443211 11 22333445556789
Q ss_pred cEEEEcCCCCCcEEEe
Q 035640 202 GFIVVGGRGAFSYEYI 217 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y 217 (596)
++++.|+.++ .+.+|
T Consensus 247 ~~l~s~s~D~-~v~vw 261 (410)
T 1vyh_C 247 TLIASCSNDQ-TVRVW 261 (410)
T ss_dssp SEEEEEETTS-CEEEE
T ss_pred CEEEEEcCCC-eEEEE
Confidence 9999988764 35555
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.84 E-value=1.4 Score=45.90 Aligned_cols=135 Identities=13% Similarity=0.085 Sum_probs=69.3
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG 202 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~ 202 (596)
..+||..+.+....-..+.... ..+..++.++++|+.+ ..+++||.. +.+.... +............ ++.
T Consensus 155 i~iwd~~~~~~~~~~~~h~~~v--~~l~~~~~~l~sg~~d---g~i~vwd~~-~~~~~~~---~~~h~~~v~~l~~-~~~ 224 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSD---STVRVWDVN-TGEMLNT---LIHHCEAVLHLRF-NNG 224 (435)
T ss_dssp EEEEESSSCCEEEEECCCSSCE--EEEECCSSEEEEEETT---SCEEEEESS-SCCEEEE---ECCCCSCEEEEEC-CTT
T ss_pred EEEEeCCCCeEEEEEcCCCCcE--EEEEECCCEEEEEcCC---CeEEEEECC-CCcEEEE---EcCCCCcEEEEEE-cCC
Confidence 6778877766443221121111 1122388999999864 468999987 5543221 3222222334444 667
Q ss_pred EEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEec
Q 035640 203 FIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILLD 279 (596)
Q Consensus 203 VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~yD 279 (596)
.++.|+.++ .+.+| ....+-. .....+.. ...+...+..+|+.++.|+. ...+||
T Consensus 225 ~l~s~s~dg-~i~vwd~~~~~~~---~~~~~~~~------------------~~~~v~~~~~~~~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 225 MMVTCSKDR-SIAVWDMASPTDI---TLRRVLVG------------------HRAAVNVVDFDDKYIVSASGDRTIKVWN 282 (435)
T ss_dssp EEEEEETTS-CEEEEECSSSSCC---EEEEEECC------------------CSSCEEEEEEETTEEEEEETTSEEEEEE
T ss_pred EEEEeeCCC-cEEEEeCCCCCCc---eeeeEecC------------------CCCcEEEEEeCCCEEEEEeCCCeEEEEE
Confidence 778887654 45666 3322100 00000000 01122233348888888765 467899
Q ss_pred CCCCeEEEee
Q 035640 280 PKANKVVREF 289 (596)
Q Consensus 280 p~t~~w~~~l 289 (596)
..+.+-...+
T Consensus 283 ~~~~~~~~~~ 292 (435)
T 1p22_A 283 TSTCEFVRTL 292 (435)
T ss_dssp TTTCCEEEEE
T ss_pred CCcCcEEEEE
Confidence 9887654333
No 94
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.84 E-value=2.2 Score=46.80 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=35.6
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccCCcEEEEcCCC
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPDGGFIVVGGRG 210 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyViGG~~ 210 (596)
..+.+||+++++|+.+ ..++++|.. +.+...... +. ....-.+++--+||+.++.+|.+
T Consensus 65 ~~~spdg~~lasg~~d---~~v~lWd~~-~~~~~~~~~-~~~~~~~v~~v~fs~dg~~l~~~~~~ 124 (611)
T 1nr0_A 65 AKTSPSGYYCASGDVH---GNVRIWDTT-QTTHILKTT-IPVFSGPVKDISWDSESKRIAAVGEG 124 (611)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEESS-STTCCEEEE-EECSSSCEEEEEECTTSCEEEEEECC
T ss_pred EEECCCCcEEEEEeCC---CCEEEeECC-CCcceeeEe-ecccCCceEEEEECCCCCEEEEEECC
Confidence 3456899999999874 579999975 333211101 11 11222345556789888887754
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.81 E-value=0.62 Score=46.16 Aligned_cols=141 Identities=12% Similarity=0.182 Sum_probs=67.7
Q ss_pred eEEEEeCCCCCEEeCcCC-CccccccCeecCC---CcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEE-
Q 035640 122 HSVLFDFETSELTALKLQ-TDTWCSSGGLTAD---GDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQV- 196 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~-~~~fc~~~~~l~d---G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~- 196 (596)
...+||..+++....... +........+.++ |.++++|+.+ ..+++||.. +.+- ... .+......-...
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~-~~~-~~~~~~~~v~~~~ 118 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLE-APEM-PVY-SVKGHKEIINAID 118 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTT-SCSS-CSE-EECCCSSCEEEEE
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCC-CCCc-cEE-EEEecccceEEEe
Confidence 367888888776544221 1111122234455 7888888764 468999976 4430 010 121111111111
Q ss_pred ------EccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEE---EcCCCc
Q 035640 197 ------TLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVY---LSPDGN 266 (596)
Q Consensus 197 ------~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~---~~~dG~ 266 (596)
.-++++.++.|+.++ .+.+| ....+.. ...+.... +.... ..+...+ ..++++
T Consensus 119 ~~~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~~~--~~~~~~~~-------~~~~~-------~v~~~~~~~~~~~~~~ 181 (357)
T 3i2n_A 119 GIGGLGIGEGAPEIVTGSRDG-TVKVWDPRQKDDP--VANMEPVQ-------GENKR-------DCWTVAFGNAYNQEER 181 (357)
T ss_dssp EESGGGCC-CCCEEEEEETTS-CEEEECTTSCSSC--SEEECCCT-------TSCCC-------CEEEEEEECCCC-CCC
T ss_pred eccccccCCCccEEEEEeCCC-eEEEEeCCCCCCc--ceeccccC-------CCCCC-------ceEEEEEEeccCCCCC
Confidence 125788888888654 45666 4332100 00000000 00000 0011111 127899
Q ss_pred EEEEecc--eeEEecCCCCeE
Q 035640 267 LFIFSNN--RSILLDPKANKV 285 (596)
Q Consensus 267 Ifv~Gg~--~~e~yDp~t~~w 285 (596)
+++.|+. ...+||..+.+-
T Consensus 182 ~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 182 VVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp EEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEccCCeEEEEECccCce
Confidence 9988875 467899988764
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.80 E-value=0.5 Score=56.44 Aligned_cols=246 Identities=10% Similarity=0.027 Sum_probs=122.2
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG 202 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~ 202 (596)
..+||..+.+....-..+........+.+||+.+++|+.+ ..+++||.. +.+..... .....-.+.+..++++
T Consensus 985 i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d---g~i~vwd~~-~~~~~~~~---~~~~~v~~~~~~~~~~ 1057 (1249)
T 3sfz_A 985 IKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED---SVIQVWNWQ-TGDYVFLQ---AHQETVKDFRLLQDSR 1057 (1249)
T ss_dssp CEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS---SBEEEEETT-TTEEECCB---CCSSCEEEEEECSSSE
T ss_pred EEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC-CCceEEEe---cCCCcEEEEEEcCCCc
Confidence 5678877765443322222222334556799999998864 468999987 66554321 2222333455566666
Q ss_pred EEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEec
Q 035640 203 FIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILLD 279 (596)
Q Consensus 203 VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~yD 279 (596)
+ +.|+.+ ..+.+| ..+++-. .. +... ...--.....+||+.++.|+.+ ..+||
T Consensus 1058 l-~~~~~d-g~v~vwd~~~~~~~---~~---~~~~----------------~~~v~~~~~s~d~~~l~s~s~d~~v~iwd 1113 (1249)
T 3sfz_A 1058 L-LSWSFD-GTVKVWNVITGRIE---RD---FTCH----------------QGTVLSCAISSDATKFSSTSADKTAKIWS 1113 (1249)
T ss_dssp E-EEEESS-SEEEEEETTTTCCC---EE---EECC----------------SSCCCCEEECSSSSSCEEECCSSCCCEEC
T ss_pred E-EEEECC-CcEEEEECCCCcee---EE---Eccc----------------CCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 5 445543 356666 4333210 00 0000 0000123446799988888754 56788
Q ss_pred CCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCC
Q 035640 280 PKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKP 359 (596)
Q Consensus 280 p~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~ 359 (596)
..+.+- +..+.+ ... .-.++. . ..+++++++|+.+ + .+..+|+...
T Consensus 1114 ~~~~~~---~~~l~~-h~~---~v~~~~--~--------s~dg~~lat~~~d-g----------------~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1114 FDLLSP---LHELKG-HNG---CVRCSA--F--------SLDGILLATGDDN-G----------------EIRIWNVSDG 1159 (1249)
T ss_dssp SSSSSC---SBCCCC-CSS---CEEEEE--E--------CSSSSEEEEEETT-S----------------CCCEEESSSS
T ss_pred CCCcce---eeeecc-CCC---cEEEEE--E--------CCCCCEEEEEeCC-C----------------EEEEEECCCC
Confidence 776542 222221 110 111111 1 1377888888754 2 2334554421
Q ss_pred CCceEeec-------CCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccc
Q 035640 360 NAVWKKER-------MPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRM 432 (596)
Q Consensus 360 ~~~W~~~~-------M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~ 432 (596)
.......+ ......-.+....|||+.++.+| | .+.+||..+. +-. ........
T Consensus 1160 ~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g------------~v~vwd~~~g---~~~--~~~~~~~~ 1219 (1249)
T 3sfz_A 1160 QLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG---G------------YLKWWNVATG---DSS--QTFYTNGT 1219 (1249)
T ss_dssp CCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES---S------------SEEEBCSSSC---BCC--CCCCCSSC
T ss_pred ceEEEeccccccccccccCceEEEEEECCCCCEEEECC---C------------eEEEEECCCC---cee--eeeeccCC
Confidence 11111100 11111111234568999998876 1 4679998776 321 11111111
Q ss_pred cceEEEEcCCCcEEEecCCCC
Q 035640 433 YHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 433 yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
.-.....-|||+.+++|+...
T Consensus 1220 ~i~~~~~s~dg~~l~~~~~dg 1240 (1249)
T 3sfz_A 1220 NLKKIHVSPDFRTYVTVDNLG 1240 (1249)
T ss_dssp CCCCCEECSSSCCEEEECTTC
T ss_pred cccEEEECCCCCEEEEecCCc
Confidence 111234568999999887653
No 97
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.75 E-value=1.6 Score=42.89 Aligned_cols=60 Identities=12% Similarity=0.199 Sum_probs=36.6
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEEccC--CcEEEEcCCCCCcEEEe
Q 035640 152 DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVTLPD--GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 152 dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~L~d--G~VyViGG~~~~~~E~y 217 (596)
+|+++++|+.+ ..++++|.. +.+|..... +... ..-.+++..++ |++++.|+.++ .+.+|
T Consensus 66 ~g~~l~s~s~D---~~v~iWd~~-~~~~~~~~~-~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-~v~~w 128 (297)
T 2pm7_B 66 FGTILASCSYD---GKVMIWKEE-NGRWSQIAV-HAVHSASVNSVQWAPHEYGPMLLVASSDG-KVSVV 128 (297)
T ss_dssp GCSEEEEEETT---TEEEEEEBS-SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEE
T ss_pred cCCEEEEEcCC---CEEEEEEcC-CCceEEEEE-eecCCCceeEEEeCcCCCCcEEEEEECCC-cEEEE
Confidence 48899999865 579999987 666654322 2211 11123333444 78888887653 45666
No 98
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.67 E-value=1.3 Score=43.71 Aligned_cols=123 Identities=11% Similarity=-0.012 Sum_probs=58.0
Q ss_pred ecCCCc-EEEEcCCCC---CCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc-EEEEcCCCCCcEEEe-CCCCC
Q 035640 149 LTADGD-LVSTGGFGG---GANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG-FIVVGGRGAFSYEYI-PPEGQ 222 (596)
Q Consensus 149 ~l~dG~-ilv~GG~~~---g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~-VyViGG~~~~~~E~y-P~~~~ 222 (596)
+.+||+ +|+...... ....+.++|+. +.+.... ......-.+.+.-+||+ +|+.+.. ...+.+| +.+.+
T Consensus 48 ~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~-~~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~~~~ 122 (353)
T 3vgz_A 48 YSQQENALWLATSQSRKLDKGGVVYRLDPV-TLEVTQA---IHNDLKPFGATINNTTQTLWFGNTV-NSAVTAIDAKTGE 122 (353)
T ss_dssp EETTTTEEEEEECCCTTTEESEEEEEECTT-TCCEEEE---EEESSCCCSEEEETTTTEEEEEETT-TTEEEEEETTTCC
T ss_pred ECCCCCEEEEEcCCCcCCCCCccEEEEcCC-CCeEEEE---EecCCCcceEEECCCCCEEEEEecC-CCEEEEEeCCCCe
Confidence 445664 544432211 13579999987 5543322 11122223455566887 6666553 3456666 55442
Q ss_pred CCCCcccccCcccccccCCCcCCcceeeeccCccceE-EEcCCCc-EEEEe-c--ceeEEecCCCCeEEEeec
Q 035640 223 SNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFV-YLSPDGN-LFIFS-N--NRSILLDPKANKVVREFP 290 (596)
Q Consensus 223 w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~-~~~~dG~-Ifv~G-g--~~~e~yDp~t~~w~~~lp 290 (596)
-. ...+.- .... .. ......|+. ...++|+ +|+.+ + ....+||+.+.+....++
T Consensus 123 ~~---~~~~~~-~~~~------~~----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 123 VK---GRLVLD-DRKR------TE----EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp EE---EEEESC-CCCC------CS----SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred eE---EEEecC-CCcc------cc----ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 10 011110 0000 00 000112333 3447776 66665 2 347889999887654443
No 99
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.42 E-value=1.7 Score=44.68 Aligned_cols=138 Identities=12% Similarity=0.021 Sum_probs=71.5
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDG 201 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG 201 (596)
...+||+.+.+....-..+........+.++|+.+++.+..+ ..+.+||+. +.+.... +.....-.+++.-+||
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~-~~~~~~~---~~~~~~~~~~~~~~~g 265 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS--EDISVIDRK-TKLEIRK---TDKIGLPRGLLLSKDG 265 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT--TEEEEEETT-TTEEEEE---CCCCSEEEEEEECTTS
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC--CcEEEEECC-CCcEEEE---ecCCCCceEEEEcCCC
Confidence 467899888765432222222223345567877654443322 479999987 6654332 2222223344555688
Q ss_pred cEEEEcCCCC-------CcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccce-EEEcCCCc-EEEEe
Q 035640 202 GFIVVGGRGA-------FSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF-VYLSPDGN-LFIFS 271 (596)
Q Consensus 202 ~VyViGG~~~-------~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~~~~dG~-Ifv~G 271 (596)
+.+++++... ..+.+| +.+++ ....+.. .-.+. ....++|+ +|+.+
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~~------~~~~~~~------------------~~~~~~~~~~~~g~~l~~~~ 321 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKEK------LIDTIGP------------------PGNKRHIVSGNTENKIYVSD 321 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTTE------EEEEEEE------------------EECEEEEEECSSTTEEEEEE
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCCc------EEeeccC------------------CCCcceEEECCCCCEEEEEe
Confidence 7777766421 234455 44321 0100000 00122 23357884 77775
Q ss_pred cc--eeEEecCCCCeEEEee
Q 035640 272 NN--RSILLDPKANKVVREF 289 (596)
Q Consensus 272 g~--~~e~yDp~t~~w~~~l 289 (596)
.. ...+||..+++....+
T Consensus 322 ~~~~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 322 MCCSKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp TTTTEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEECCCCcEEEEe
Confidence 53 4778999887755444
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.34 E-value=3.1 Score=43.13 Aligned_cols=235 Identities=12% Similarity=0.164 Sum_probs=115.2
Q ss_pred EEEEeCCCCCEEeCcCCCc--cccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccC
Q 035640 123 SVLFDFETSELTALKLQTD--TWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~--~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~d 200 (596)
..+||..+.+....-..+. .+| +..++.++++|+.+ ..+++||.. +.+-... +............ +
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v~~----~~~~~~~l~s~~~d---g~i~vwd~~-~~~~~~~---~~~h~~~v~~~~~-~ 208 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGVWS----SQMRDNIIISGSTD---RTLKVWNAE-TGECIHT---LYGHTSTVRCMHL-H 208 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCEEE----EEEETTEEEEEETT---SCEEEEETT-TTEEEEE---ECCCSSCEEEEEE-E
T ss_pred EEEEECCCCcEEEEEcCCCCCEEE----EEecCCEEEEEeCC---CeEEEEECC-cCcEEEE---ECCCCCcEEEEEe-c
Confidence 6788887776432211111 122 12246788888764 468999987 5543221 2222222233344 6
Q ss_pred CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEE
Q 035640 201 GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SIL 277 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~ 277 (596)
++.++.|+.++ .+.+| ..+.+ ....+.. ...+...+..+|+.++.|+.+ ..+
T Consensus 209 ~~~l~s~s~dg-~i~~wd~~~~~------~~~~~~~------------------~~~~v~~~~~~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 209 EKRVVSGSRDA-TLRVWDIETGQ------CLHVLMG------------------HVAAVRCVQYDGRRVVSGAYDFMVKV 263 (445)
T ss_dssp TTEEEEEETTS-EEEEEESSSCC------EEEEEEC------------------CSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred CCEEEEEeCCC-EEEEEECCCCc------EEEEEcC------------------CcccEEEEEECCCEEEEEcCCCEEEE
Confidence 77788887653 45566 33321 0000100 001222333488888887653 677
Q ss_pred ecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEee
Q 035640 278 LDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDIT 357 (596)
Q Consensus 278 yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~ 357 (596)
||..+.+....+ .+ ... .-.++. .+++.+++|+.+ ..+..+|+.
T Consensus 264 wd~~~~~~~~~~---~~-~~~---~v~~~~------------~~~~~l~~~~~d-----------------~~i~i~d~~ 307 (445)
T 2ovr_B 264 WDPETETCLHTL---QG-HTN---RVYSLQ------------FDGIHVVSGSLD-----------------TSIRVWDVE 307 (445)
T ss_dssp EEGGGTEEEEEE---CC-CSS---CEEEEE------------ECSSEEEEEETT-----------------SCEEEEETT
T ss_pred EECCCCcEeEEe---cC-CCC---ceEEEE------------ECCCEEEEEeCC-----------------CeEEEEECC
Confidence 898877654333 21 111 111211 256667777654 234556654
Q ss_pred CCCCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCce-EEecCCCcccccceE
Q 035640 358 KPNAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRF-KELAAGTIPRMYHSS 436 (596)
Q Consensus 358 ~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~W-t~~a~~~~~R~yhs~ 436 (596)
+.+-.. .+........ .+.++++.+++|+.+ | .+.+||..+. +- ..+....... ..+
T Consensus 308 --~~~~~~-~~~~~~~~v~-~~~~~~~~l~~~~~d-g------------~i~vwd~~~~---~~~~~~~~~~~~~--~~v 365 (445)
T 2ovr_B 308 --TGNCIH-TLTGHQSLTS-GMELKDNILVSGNAD-S------------TVKIWDIKTG---QCLQTLQGPNKHQ--SAV 365 (445)
T ss_dssp --TCCEEE-EECCCCSCEE-EEEEETTEEEEEETT-S------------CEEEEETTTC---CEEEEECSTTSCS--SCE
T ss_pred --CCCEEE-EEcCCcccEE-EEEEeCCEEEEEeCC-C------------eEEEEECCCC---cEEEEEccCCCCC--CCE
Confidence 222111 1111112222 234578888888764 1 5689998776 32 2222111011 112
Q ss_pred EEEcCCCcEEEecCCC
Q 035640 437 SVLLPDGTVLVAGSNT 452 (596)
Q Consensus 437 a~LlpDG~Vlv~GG~~ 452 (596)
..+-.+++.+++|+..
T Consensus 366 ~~~~~~~~~l~s~~~d 381 (445)
T 2ovr_B 366 TCLQFNKNFVITSSDD 381 (445)
T ss_dssp EEEEECSSEEEEEETT
T ss_pred EEEEECCCEEEEEeCC
Confidence 2233488999998864
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.32 E-value=3 Score=42.71 Aligned_cols=215 Identities=13% Similarity=0.108 Sum_probs=106.3
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPD 200 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~d 200 (596)
...+||..+.+....-..+.... ..+..++.++++|+.+ ..+.+||.. ...-. ... +. ....-.+.+..++
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d---g~i~i~d~~-~~~~~-~~~-~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARV--GCLSWNRHVLSSGSRS---GAIHHHDVR-IANHQ-IGT-LQGHSSEVCGLAWRSD 228 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT-SSSCE-EEE-EECCSSCEEEEEECTT
T ss_pred eEEEEECcCCeEEEEecCCCCce--EEEEECCCEEEEEcCC---CCEEEEecc-cCcce-eeE-EcCCCCCeeEEEEcCC
Confidence 36788888776443221111111 1122278888888764 578899975 22211 101 11 1122234555668
Q ss_pred CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCC-CcEEEEec----ce
Q 035640 201 GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPD-GNLFIFSN----NR 274 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~d-G~Ifv~Gg----~~ 274 (596)
|+.+++|+.++ .+.+| ..+.+ .... +.... .. --.....++ ..+++.|+ ..
T Consensus 229 ~~~l~s~~~d~-~v~iwd~~~~~-----~~~~-~~~~~---------------~~-v~~~~~~p~~~~ll~~~~gs~d~~ 285 (401)
T 4aez_A 229 GLQLASGGNDN-VVQIWDARSSI-----PKFT-KTNHN---------------AA-VKAVAWCPWQSNLLATGGGTMDKQ 285 (401)
T ss_dssp SSEEEEEETTS-CEEEEETTCSS-----EEEE-ECCCS---------------SC-CCEEEECTTSTTEEEEECCTTTCE
T ss_pred CCEEEEEeCCC-eEEEccCCCCC-----ccEE-ecCCc---------------ce-EEEEEECCCCCCEEEEecCCCCCE
Confidence 99999998764 45566 33221 0000 00000 00 011223454 46777764 34
Q ss_pred eEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEE
Q 035640 275 SILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRI 354 (596)
Q Consensus 275 ~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~i 354 (596)
..+||..+++....+. ... .-.++.+ .+ ....|++++|..+ ..+..+
T Consensus 286 i~i~d~~~~~~~~~~~---~~~-----~v~~~~~--s~-------~~~~l~~~~g~~d----------------g~i~v~ 332 (401)
T 4aez_A 286 IHFWNAATGARVNTVD---AGS-----QVTSLIW--SP-------HSKEIMSTHGFPD----------------NNLSIW 332 (401)
T ss_dssp EEEEETTTCCEEEEEE---CSS-----CEEEEEE--CS-------SSSEEEEEECTTT----------------CEEEEE
T ss_pred EEEEECCCCCEEEEEe---CCC-----cEEEEEE--CC-------CCCeEEEEeecCC----------------CcEEEE
Confidence 6789988877544332 111 1112211 11 2334444445331 235567
Q ss_pred EeeCCCCceEee-c--CCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCC
Q 035640 355 DITKPNAVWKKE-R--MPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGP 416 (596)
Q Consensus 355 d~~~~~~~W~~~-~--M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~ 416 (596)
|+. +.+.... . -...+... ...-|||+.++++|.+ | .+.+||..+.
T Consensus 333 ~~~--~~~~~~~~~~~~h~~~v~~-~~~s~dg~~l~s~~~d-g------------~i~iw~~~~~ 381 (401)
T 4aez_A 333 SYS--SSGLTKQVDIPAHDTRVLY-SALSPDGRILSTAASD-E------------NLKFWRVYDG 381 (401)
T ss_dssp EEE--TTEEEEEEEEECCSSCCCE-EEECTTSSEEEEECTT-S------------EEEEEECCC-
T ss_pred ecC--CccceeEEEecCCCCCEEE-EEECCCCCEEEEEeCC-C------------cEEEEECCCC
Confidence 765 4434332 2 23334433 3567899999999865 1 5688998776
No 102
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.30 E-value=2.2 Score=41.01 Aligned_cols=131 Identities=15% Similarity=0.091 Sum_probs=66.8
Q ss_pred EEEEeCCCCCEEeCcCC-CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccC
Q 035640 123 SVLFDFETSELTALKLQ-TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~-~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~d 200 (596)
...||+. ++++..... ......+.+..++|++++.... ...+.+||+. .+..... +. ....-.+.+.-++
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~--g~~~~~~--~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITDD--GKIREYE--LPNKGSYPSFITLGSD 151 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--CCEEEEE--CSSTTCCEEEEEECTT
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECCC--CCEEEec--CCCCCCCCceEEEcCC
Confidence 4566665 444443321 1112223344568999998643 2468889984 3333321 11 1122234555568
Q ss_pred CcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEE-cCCCcEEEEe--cceeE
Q 035640 201 GGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYL-SPDGNLFIFS--NNRSI 276 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~-~~dG~Ifv~G--g~~~e 276 (596)
|++|+..-. ...+..| + +++.. ..+.. . ....|...+ -++|+||+.. +....
T Consensus 152 g~l~v~~~~-~~~i~~~~~-~g~~~----~~~~~-~-----------------~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 152 NALWFTENQ-NNAIGRITE-SGDIT----EFKIP-T-----------------PASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp SCEEEEETT-TTEEEEECT-TCCEE----EEECS-S-----------------TTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEEeCC-CCEEEEEcC-CCcEE----EeeCC-C-----------------CCCcceeEEECCCCCEEEEccCCceEE
Confidence 999986532 2345555 4 33211 11000 0 011344433 4689999886 34678
Q ss_pred EecCCCCeEE
Q 035640 277 LLDPKANKVV 286 (596)
Q Consensus 277 ~yDp~t~~w~ 286 (596)
+||+ +++..
T Consensus 208 ~~~~-~g~~~ 216 (299)
T 2z2n_A 208 RITT-SGEIT 216 (299)
T ss_dssp EECT-TCCEE
T ss_pred EECC-CCcEE
Confidence 8999 66654
No 103
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.25 E-value=1.2 Score=45.16 Aligned_cols=116 Identities=10% Similarity=0.028 Sum_probs=61.2
Q ss_pred CeecCC-CcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-----cccccEEEEccCC-cEEEEcCCCC--CcEEEe
Q 035640 147 GGLTAD-GDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-----PRWYSTQVTLPDG-GFIVVGGRGA--FSYEYI 217 (596)
Q Consensus 147 ~~~l~d-G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-----~R~y~s~~~L~dG-~VyViGG~~~--~~~E~y 217 (596)
..+.++ +.++++|+.+ ..+++||.. +.+....-. ... ...-.+++..++| .+++.|+.++ ..+.+|
T Consensus 171 ~~~~~~~~~~l~~~~~d---g~v~iwd~~-~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSS---NFASIWDLK-AKKEVIHLS-YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp EEECSSCTTEEEEESSS---SCEEEEETT-TTEEEEEEC-CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred EEeCCCCCcEEEEEcCC---CCEEEEECC-CCCcceEEe-ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 345566 7899998764 468999987 554322111 111 2223345556676 6788877654 145566
Q ss_pred -CCCCCCCCCcccccCcc-cccccCCCcCCcceeeeccCccc-eEEEcC-CCcEEEEecc--eeEEecCCCCeEEEee
Q 035640 218 -PPEGQSNKSPVFFPLLK-DTTNDLKGIDGQEMFLIENNLYP-FVYLSP-DGNLFIFSNN--RSILLDPKANKVVREF 289 (596)
Q Consensus 218 -P~~~~w~~~~~~~p~l~-~t~~~~~g~~~~~~~~~~~~~yp-~~~~~~-dG~Ifv~Gg~--~~e~yDp~t~~w~~~l 289 (596)
...... ....+. .. .... .+...+ ++++++.|+. ...+||..+.+....+
T Consensus 246 d~~~~~~-----~~~~~~~~~-----------------~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 246 DLRNANT-----PLQTLNQGH-----------------QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp ETTSTTS-----CSBCCCSCC-----------------SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred eCCCCCC-----CcEEeecCc-----------------cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 333210 000010 00 0001 122345 8888888875 4678998887654333
No 104
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.18 E-value=1.3 Score=49.84 Aligned_cols=223 Identities=11% Similarity=0.090 Sum_probs=115.9
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-cccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-PRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNK 225 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~ 225 (596)
.+-+||.++++|+.+ ..+.+||.. +.+.... +.. ...-.+.+--+||+.+++|+.+ ..+.+| ..+++.
T Consensus 20 ~~sp~~~~la~~~~~---g~v~iwd~~-~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vw~~~~~~~-- 89 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYS---GRVEIWNYE-TQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFNYNTGEK-- 89 (814)
T ss_dssp EECSSSSEEEEEETT---SEEEEEETT-TTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEETTTCCE--
T ss_pred EECCCCCEEEEEeCC---CEEEEEECC-CCceEEE---EecCCCcEEEEEEeCCCCEEEEEeCC-CeEEEEECCCCcE--
Confidence 456789999998753 468999976 5543321 221 1112244556689999998875 345666 433311
Q ss_pred CcccccCcccccccCCCcCCcceeeeccCccc-eEEEcCCCcEEEEecc--eeEEecCCCC-eEEEeeccccCCCCCCCC
Q 035640 226 SPVFFPLLKDTTNDLKGIDGQEMFLIENNLYP-FVYLSPDGNLFIFSNN--RSILLDPKAN-KVVREFPILTGGSRNYPA 301 (596)
Q Consensus 226 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp-~~~~~~dG~Ifv~Gg~--~~e~yDp~t~-~w~~~lp~mp~~~R~~p~ 301 (596)
...+... .-.- .....++|+.++.|+. ...+||..++ .....+ .. ...
T Consensus 90 ----~~~~~~~-----------------~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~---~~-~~~--- 141 (814)
T 3mkq_A 90 ----VVDFEAH-----------------PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF---EG-HEH--- 141 (814)
T ss_dssp ----EEEEECC-----------------SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE---EC-CSS---
T ss_pred ----EEEEecC-----------------CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE---cC-CCC---
Confidence 0001000 0011 1233578887777765 4678888776 322222 21 111
Q ss_pred CceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeC
Q 035640 302 SAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILP 381 (596)
Q Consensus 302 ~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLp 381 (596)
.-.++.+ .| .+++.+++|+.+ .++..+|+......+.... ...+.-......|
T Consensus 142 ~v~~~~~--~p-------~~~~~l~~~~~d-----------------g~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 142 FVMCVAF--NP-------KDPSTFASGCLD-----------------RTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYP 194 (814)
T ss_dssp CEEEEEE--ET-------TEEEEEEEEETT-----------------SEEEEEETTCSSCSEEEEC-CCTTCCCEEEECC
T ss_pred cEEEEEE--Ec-------CCCCEEEEEeCC-----------------CeEEEEECCCCcceeEEec-CCCCCEEEEEEEE
Confidence 0111111 10 156788887754 2345566653333333331 1111112223345
Q ss_pred --CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 382 --TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 382 --dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
+|+.+++|+.+ | .+.+||..+. +-.. ........-.....-|||+++++|+...
T Consensus 195 ~~~~~~l~~~~~d-g------------~i~~~d~~~~---~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 195 LPDKPYMITASDD-L------------TIKIWDYQTK---SCVA--TLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp STTCCEEEEECTT-S------------EEEEEETTTT---EEEE--EEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCCCEEEEEeCC-C------------EEEEEECCCC---cEEE--EEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 99999998864 1 5789998776 3211 1111112223455679999999988644
No 105
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.11 E-value=1.7 Score=43.82 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=31.6
Q ss_pred cEEEEcCCCCCCCeEEEEeCCCCCc------eeecCcCCCC---cccccEEEEc----cCCcE-EEEcCCCCCcEEEe
Q 035640 154 DLVSTGGFGGGANTVRYLSTCDGCD------WREYPTALAD---PRWYSTQVTL----PDGGF-IVVGGRGAFSYEYI 217 (596)
Q Consensus 154 ~ilv~GG~~~g~~~v~~fdP~~t~~------W~~~~~~M~~---~R~y~s~~~L----~dG~V-yViGG~~~~~~E~y 217 (596)
+++++|+.+ ..+++||.. +.+ +..... ... ...-.+++.. ++++. +++|+.++ .+.+|
T Consensus 82 ~~l~s~~~d---g~i~iw~~~-~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-~i~iw 153 (397)
T 1sq9_A 82 CLVATTSFS---GDLLFYRIT-REDETKKVIFEKLDL-LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-TTYIW 153 (397)
T ss_dssp EEEEEEETT---SCEEEEEEE-ECTTTCCEEEEEECC-SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-CEEEE
T ss_pred cEEEEEcCC---CCEEEEEcc-CCcccccccceeecc-cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-cEEEE
Confidence 888988764 458888876 444 544432 110 1222334445 68888 88887654 34455
No 106
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.05 E-value=1.7 Score=47.52 Aligned_cols=228 Identities=10% Similarity=0.077 Sum_probs=115.8
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-C--CCCCCCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-P--PEGQSNK 225 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P--~~~~w~~ 225 (596)
+-++|++|+++..+ ..+.++|.. +.+-... +..+..-++++.-+||+.+.+++.+ .++.+| . .+.+
T Consensus 145 ~~p~~~~~vs~~~d---~~V~v~D~~-t~~~~~~---i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~--- 213 (543)
T 1nir_A 145 LDLPNLFSVTLRDA---GQIALVDGD-SKKIVKV---IDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPT--- 213 (543)
T ss_dssp CCGGGEEEEEEGGG---TEEEEEETT-TCCEEEE---EECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCE---
T ss_pred cCCCCEEEEEEcCC---CeEEEEECC-CceEEEE---EecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCCc---
Confidence 45688999987643 578999987 6554321 2222223456677799777666665 667777 4 2221
Q ss_pred CcccccCcccccccCCCcCCcceeeeccCccceEE-EcC----CCcEEEEec---ceeEEecCCCCeEEEeecccc--CC
Q 035640 226 SPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVY-LSP----DGNLFIFSN---NRSILLDPKANKVVREFPILT--GG 295 (596)
Q Consensus 226 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~-~~~----dG~Ifv~Gg---~~~e~yDp~t~~w~~~lp~mp--~~ 295 (596)
....+. ....|+.+ ..+ ||+..++++ ....++|..+.+-.+.++... ..
T Consensus 214 ---~~~~i~------------------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 214 ---KVAEIK------------------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD 272 (543)
T ss_dssp ---EEEEEE------------------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSS
T ss_pred ---EEEEEe------------------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccC
Confidence 110010 01134443 457 898666665 356789998887654443211 00
Q ss_pred CCCC-CCCc-eEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeecCCCCcc
Q 035640 296 SRNY-PASA-MSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRV 373 (596)
Q Consensus 296 ~R~~-p~~g-~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~ 373 (596)
...| |... .++.. . ..+.++|+....+ ..+..+|..+....... .++..+.
T Consensus 273 ~~~~~~~~~v~~i~~--s-------~~~~~~~vs~~~~-----------------g~i~vvd~~~~~~l~~~-~i~~~~~ 325 (543)
T 1nir_A 273 TQTYHPEPRVAAIIA--S-------HEHPEFIVNVKET-----------------GKVLLVNYKDIDNLTVT-SIGAAPF 325 (543)
T ss_dssp SCCEESCCCEEEEEE--C-------SSSSEEEEEETTT-----------------TEEEEEECTTSSSCEEE-EEECCSS
T ss_pred ccccccCCceEEEEE--C-------CCCCEEEEEECCC-----------------CeEEEEEecCCCcceeE-EeccCcC
Confidence 0001 0001 11111 1 1245666654322 24555665432221111 1222344
Q ss_pred ccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEE-ecCCCcccccceEEEEcCC-CcEEEecC
Q 035640 374 MGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKE-LAAGTIPRMYHSSSVLLPD-GTVLVAGS 450 (596)
Q Consensus 374 ~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~-~a~~~~~R~yhs~a~LlpD-G~Vlv~GG 450 (596)
-++...-|||+.+++..... .++.+||.++. +-.. +..-..|+...+....-|| |++|+++.
T Consensus 326 ~~~~~~spdg~~l~va~~~~------------~~v~v~D~~tg---~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 326 LHDGGWDSSHRYFMTAANNS------------NKVAVIDSKDR---RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp CCCEEECTTSCEEEEEEGGG------------TEEEEEETTTT---EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB
T ss_pred ccCceECCCCCEEEEEecCC------------CeEEEEECCCC---eEEEeeccCCCCCCCCCcccCCCCCccEEEecc
Confidence 44456679999555543321 15678999987 5432 2222223322244445576 89999875
No 107
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=95.00 E-value=1.3 Score=46.50 Aligned_cols=72 Identities=14% Similarity=0.181 Sum_probs=39.7
Q ss_pred ccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEc-CCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCC
Q 035640 374 MGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYT-PRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 374 ~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YD-P~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
.|+.++.-||+||.-|-...|.-|.+... ....+..-+ |... +...++. -.+|+.| |..||+||.-|-+.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~-~~~~p~~v~~~~~~---~v~~va~----G~~hs~a-lt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNL-DQCSPVQVRFPDDQ---KVVQVSC----GWRHTLA-VTERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSS-CEEEEEEECCGGGC---CEEEEEE----CSSEEEE-EETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCC-CCccCEEEeccCCC---cEEEEEe----CCCeEEE-EeCCCCEEEecCCC
Confidence 35567778999999996655543322111 111222211 1112 3443332 2457655 56899999999876
Q ss_pred CC
Q 035640 453 HN 454 (596)
Q Consensus 453 ~~ 454 (596)
++
T Consensus 358 ~G 359 (406)
T 4d9s_A 358 NG 359 (406)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.90 E-value=0.73 Score=52.35 Aligned_cols=89 Identities=10% Similarity=0.140 Sum_probs=50.3
Q ss_pred EEEEeCCCCCEEeCcCC--CccccccCeecCC--CcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEE
Q 035640 123 SVLFDFETSELTALKLQ--TDTWCSSGGLTAD--GDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVT 197 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~--~~~fc~~~~~l~d--G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~ 197 (596)
..+||..++++..+... +........+.++ |..+++|+.+ ..+.+||.. +.+|..... +... ..-.+++.
T Consensus 33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~-~~~~~~~~~-~~~h~~~V~~v~~ 107 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE-NGRWSQIAV-HAVHSASVNSVQW 107 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEE
T ss_pred EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECC-CCccccccc-ccCCCCCeEEEEE
Confidence 55666665555444322 1111112233345 8999998864 468899987 776655432 3322 22234445
Q ss_pred ccC--CcEEEEcCCCCCcEEEe
Q 035640 198 LPD--GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 198 L~d--G~VyViGG~~~~~~E~y 217 (596)
.++ |+++++|+.++ .+.+|
T Consensus 108 sp~~~~~~l~sgs~dg-~I~vw 128 (753)
T 3jro_A 108 APHEYGPLLLVASSDG-KVSVV 128 (753)
T ss_dssp CCGGGCSEEEEEETTS-EEEEE
T ss_pred CCCCCCCEEEEEeCCC-cEEEE
Confidence 566 88999998764 45566
No 109
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.90 E-value=1 Score=44.69 Aligned_cols=90 Identities=9% Similarity=-0.092 Sum_probs=50.3
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTA-DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~-dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~d 200 (596)
..+||..+.+....-..+........+.+ ++.++++|+.+ ..+++||.. +.+-...-..+. ....-.+++..++
T Consensus 97 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQ-TDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp EEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETT-TTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred EEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEee-cCeEEEEecccccccCceeEEEECCC
Confidence 66788777654322111222222334556 89999998864 468999986 544322110012 1222234445578
Q ss_pred CcEEEEcCCCCCcEEEe
Q 035640 201 GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y 217 (596)
|+.++.|+.++ .+.+|
T Consensus 173 ~~~l~~~~~dg-~i~i~ 188 (366)
T 3k26_A 173 GEKIMSCGMDH-SLKLW 188 (366)
T ss_dssp SSEEEEEETTS-CEEEE
T ss_pred CCEEEEecCCC-CEEEE
Confidence 88988888754 45566
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.89 E-value=3.2 Score=40.71 Aligned_cols=63 Identities=6% Similarity=0.029 Sum_probs=36.6
Q ss_pred eecCCCc-EEEEcCCCCCCCeEEEEeC-CCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 148 GLTADGD-LVSTGGFGGGANTVRYLST-CDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 148 ~~l~dG~-ilv~GG~~~g~~~v~~fdP-~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
.+.++|+ .+++|+.+ ..+.+||. . +.+...+.. ......-.+.+..+ ++.++.|+.++ .+.+|
T Consensus 63 ~~~~~~~~~l~~~~~d---g~i~~wd~~~-~~~~~~~~~-~~~~~~v~~l~~~~-~~~l~s~~~d~-~i~iw 127 (342)
T 1yfq_A 63 NFIDNTDLQIYVGTVQ---GEILKVDLIG-SPSFQALTN-NEANLGICRICKYG-DDKLIAASWDG-LIEVI 127 (342)
T ss_dssp EEEESSSEEEEEEETT---SCEEEECSSS-SSSEEECBS-CCCCSCEEEEEEET-TTEEEEEETTS-EEEEE
T ss_pred EECCCCCcEEEEEcCC---CeEEEEEecc-CCceEeccc-cCCCCceEEEEeCC-CCEEEEEcCCC-eEEEE
Confidence 4556899 88888754 46899998 6 555433321 10112122344444 78888887653 45555
No 111
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.83 E-value=1.7 Score=44.27 Aligned_cols=226 Identities=15% Similarity=0.163 Sum_probs=106.1
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCc-CC-CCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPT-AL-ADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSN 224 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~-~M-~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~ 224 (596)
.+.+|++++ +|+.+ ..|++||.. +++-..... .+ .....-.+++..+||+.++.|+.++ ++.+| ..+++
T Consensus 89 ~~s~d~~l~-~~s~d---g~v~lWd~~-~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-~i~iwd~~~~~-- 160 (344)
T 4gqb_B 89 TWVGERGIL-VASDS---GAVELWELD-ENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-CIKVWDLAQQV-- 160 (344)
T ss_dssp EEETTTEEE-EEETT---SEEEEEEEC-TTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTTE--
T ss_pred EEeCCCeEE-EEECC---CEEEEEecc-CCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCCCc--
Confidence 345677655 55443 469999986 543211100 01 1112223455677999999988664 46666 43321
Q ss_pred CCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCC-cEEEEecc--eeEEecCCCCeEEEeeccccCCCCCCCC
Q 035640 225 KSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDG-NLFIFSNN--RSILLDPKANKVVREFPILTGGSRNYPA 301 (596)
Q Consensus 225 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG-~Ifv~Gg~--~~e~yDp~t~~w~~~lp~mp~~~R~~p~ 301 (596)
.+..+..-. ...+ .....+++ .+++.|+. ...+||..+.+....+.. . ....
T Consensus 161 ----~~~~~~~h~---------------~~V~-~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~--~~~~-- 215 (344)
T 4gqb_B 161 ----VLSSYRAHA---------------AQVT-CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC-S--APGY-- 215 (344)
T ss_dssp ----EEEEECCCS---------------SCEE-EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CC--
T ss_pred ----EEEEEcCcC---------------CceE-EEEecCCCCCceeeeccccccccccccccceeeeeec-c--eeec--
Confidence 110010000 0000 12234566 58887764 467899988765433311 1 0110
Q ss_pred CceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeC
Q 035640 302 SAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILP 381 (596)
Q Consensus 302 ~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLp 381 (596)
.-.++.. . ..+++++++|+.+ .++..+|+.......+.. -....... ...-|
T Consensus 216 ~~~~~~~--~-------p~~~~~l~sg~~d-----------------g~v~~wd~~~~~~~~~~~-~h~~~v~~-v~fsp 267 (344)
T 4gqb_B 216 LPTSLAW--H-------PQQSEVFVFGDEN-----------------GTVSLVDTKSTSCVLSSA-VHSQCVTG-LVFSP 267 (344)
T ss_dssp CEEEEEE--C-------SSCTTEEEEEETT-----------------SEEEEEESCC--CCEEEE-CCSSCEEE-EEECS
T ss_pred cceeeee--c-------CCCCcceEEeccC-----------------CcEEEEECCCCcEEEEEc-CCCCCEEE-EEEcc
Confidence 1112211 1 1366788888754 234456664211111111 11111111 23357
Q ss_pred CC-eEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCc-EEEecCCCC
Q 035640 382 TE-DILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGT-VLVAGSNTH 453 (596)
Q Consensus 382 dG-~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~-Vlv~GG~~~ 453 (596)
|| ++++.|+.+ + ++.+||-.+. +-..+.. . ...-.....-|||+ +++.||.+.
T Consensus 268 ~g~~~lasgs~D-~------------~i~vwd~~~~---~~~~~~~--H-~~~V~~v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 268 HSVPFLASLSED-C------------SLAVLDSSLS---ELFRSQA--H-RDFVRDATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp SSSCCEEEEETT-S------------CEEEECTTCC---EEEEECC--C-SSCEEEEEECSSSTTEEEEEETTS
T ss_pred CCCeEEEEEeCC-C------------eEEEEECCCC---cEEEEcC--C-CCCEEEEEEeCCCCeEEEEEcCCC
Confidence 87 567777654 1 5789998776 4322211 0 01111233457875 777777643
No 112
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.69 E-value=3.8 Score=42.53 Aligned_cols=87 Identities=18% Similarity=0.204 Sum_probs=48.3
Q ss_pred eEEEEeCCCCCEEeCcCCC--ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcc-cccEEEEc
Q 035640 122 HSVLFDFETSELTALKLQT--DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPR-WYSTQVTL 198 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~--~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R-~y~s~~~L 198 (596)
.+.+||.+++....+.... ...+....+.++|+++++|+.+ ..+.++|.. ...-.. +.... .-.+++.-
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~-~~~~~~----~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMD-GKELWN----LRMHKKKVTHVALN 259 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESS-SCBCCC----SBCCSSCEEEEEEC
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccC-cceeEE----EecccceEEeeeec
Confidence 3678998887665543322 2222234456799999999864 468999975 332111 22111 11233334
Q ss_pred cCCc-EEEEcCCCCCcEEEe
Q 035640 199 PDGG-FIVVGGRGAFSYEYI 217 (596)
Q Consensus 199 ~dG~-VyViGG~~~~~~E~y 217 (596)
+++. +++.|+.++ .+.+|
T Consensus 260 p~~~~~~~s~s~d~-~v~iw 278 (435)
T 4e54_B 260 PCCDWFLATASVDQ-TVKIW 278 (435)
T ss_dssp TTCSSEEEEEETTS-BCCEE
T ss_pred CCCceEEEEecCcc-eeeEE
Confidence 4665 666676543 44555
No 113
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.66 E-value=3.7 Score=45.68 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=28.0
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTC 174 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~ 174 (596)
...+||..+.+....-..+........+.++|+.+++|+.+ ..+++||..
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~ 502 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTL 502 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTT
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECC
Confidence 46778877765432211122112223445688888888764 467888754
No 114
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.65 E-value=1.3 Score=43.87 Aligned_cols=230 Identities=12% Similarity=0.109 Sum_probs=111.9
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcc-cccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPR-WYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNK 225 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R-~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~ 225 (596)
.+.+||+++++|+.+ ..+++||.. +.+-... +.... .-.+++..+||+.++.|+.++ .+.+| ..+.+..
T Consensus 39 ~~s~~~~~l~~~~~d---g~i~vwd~~-~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~- 109 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKD---SSASVWYSL-NGERLGT---LDGHTGTIWSIDVDCFTKYCVTGSADY-SIKLWDVSNGQCV- 109 (369)
T ss_dssp EECTTSCEEEEEESS---SCEEEEETT-TCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTT-EEEEEETTTCCEE-
T ss_pred EEcCCCCEEEEEeCC---CEEEEEeCC-Cchhhhh---hhhcCCcEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCcEE-
Confidence 345689999998754 468999976 4433221 22111 222444556899999888653 45566 3332110
Q ss_pred CcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc-------eeEEecCCCCeEEEeeccccCCC-C
Q 035640 226 SPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-------RSILLDPKANKVVREFPILTGGS-R 297 (596)
Q Consensus 226 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-------~~e~yDp~t~~w~~~lp~mp~~~-R 297 (596)
..... . .. --.....++|+.++.++. ...+||..+..-...+....... +
T Consensus 110 --~~~~~--~-----------------~~-v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 110 --ATWKS--P-----------------VP-VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp --EEEEC--S-----------------SC-EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred --EEeec--C-----------------CC-eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 00000 0 00 012334578888777653 34566654432100000000000 0
Q ss_pred CC-CCCc--eEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCcc
Q 035640 298 NY-PASA--MSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRV 373 (596)
Q Consensus 298 ~~-p~~g--~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~ 373 (596)
.. ...+ ....+.. ..+++.+++|+.+ ..+..+|+... .+-... .......
T Consensus 168 ~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~d-----------------g~i~i~d~~~~-~~~~~~~~~~~~~v 221 (369)
T 3zwl_B 168 KIITHEGLDAATVAGW--------STKGKYIIAGHKD-----------------GKISKYDVSNN-YEYVDSIDLHEKSI 221 (369)
T ss_dssp EEECCTTCCCEEEEEE--------CGGGCEEEEEETT-----------------SEEEEEETTTT-TEEEEEEECCSSCE
T ss_pred eccCCcCccceeEEEE--------cCCCCEEEEEcCC-----------------CEEEEEECCCC-cEeEEEEecCCCce
Confidence 00 0000 1111111 1256677777643 23556666421 121111 2222222
Q ss_pred ccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 374 MGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 374 ~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
.. ....|||+.+++++.+ + .+.+||..+. +....-. .........+.|||+.+++|+...
T Consensus 222 ~~-~~~~~~~~~l~~~~~d-~------------~i~v~d~~~~---~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 222 SD-MQFSPDLTYFITSSRD-T------------NSFLVDVSTL---QVLKKYE---TDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EE-EEECTTSSEEEEEETT-S------------EEEEEETTTC---CEEEEEE---CSSCEEEEEECSSSSEEEEEECCC
T ss_pred eE-EEECCCCCEEEEecCC-c------------eEEEEECCCC---ceeeeec---CCCCceeEEecCCCceEEEeecCC
Confidence 22 3556899999988754 1 5789998876 3322111 112223455689999999998755
Q ss_pred C
Q 035640 454 N 454 (596)
Q Consensus 454 ~ 454 (596)
.
T Consensus 282 ~ 282 (369)
T 3zwl_B 282 A 282 (369)
T ss_dssp -
T ss_pred C
Confidence 3
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.64 E-value=3.7 Score=40.34 Aligned_cols=87 Identities=11% Similarity=0.032 Sum_probs=47.6
Q ss_pred EEEEeCCCCCEEe-Cc-CCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEE--c
Q 035640 123 SVLFDFETSELTA-LK-LQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVT--L 198 (596)
Q Consensus 123 ~~~yDp~t~~w~~-l~-~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~--L 198 (596)
..+||..++.... .. ..+........+.++|+.+++|+.+ ..+++||.. +.+...... ....-.+.+. -
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~-~~~~~~~~~---~~~~v~~~~~~~~ 138 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLS-SNQAIQIAQ---HDAPVKTIHWIKA 138 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TTEEEEEEE---CSSCEEEEEEEEC
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcC-CCCceeecc---ccCceEEEEEEeC
Confidence 5677776632221 11 1112122223456799999998764 579999987 655443211 1111122333 4
Q ss_pred cCCcEEEEcCCCCCcEEEe
Q 035640 199 PDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 199 ~dG~VyViGG~~~~~~E~y 217 (596)
++++.++.|+.++ .+.+|
T Consensus 139 ~~~~~l~~~~~dg-~i~vw 156 (368)
T 3mmy_A 139 PNYSCVMTGSWDK-TLKFW 156 (368)
T ss_dssp SSCEEEEEEETTS-EEEEE
T ss_pred CCCCEEEEccCCC-cEEEE
Confidence 6888888888654 45666
No 116
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.63 E-value=1.8 Score=42.68 Aligned_cols=66 Identities=14% Similarity=0.039 Sum_probs=38.1
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc-EEEEcCCCCCcEEEe-CCC
Q 035640 149 LTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG-FIVVGGRGAFSYEYI-PPE 220 (596)
Q Consensus 149 ~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~-VyViGG~~~~~~E~y-P~~ 220 (596)
+..++++|++++.. ..+.++|+. +.+....-. +.....-...+.-+||+ +|+.+. ....+.+| +.+
T Consensus 7 ~~~~~~~~v~~~~~---~~v~~~d~~-~~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~~-~~~~i~~~d~~t 74 (349)
T 1jmx_B 7 LKAGHEYMIVTNYP---NNLHVVDVA-SDTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLNN-HYGDIYGIDLDT 74 (349)
T ss_dssp CCTTCEEEEEEETT---TEEEEEETT-TTEEEEEEE-CSSCCSSCEEEECTTSSEEEEEET-TTTEEEEEETTT
T ss_pred ccCCCEEEEEeCCC---CeEEEEECC-CCcEEEEEe-cCCCCCCceeEECCCCCEEEEEeC-CCCcEEEEeCCC
Confidence 34578888888653 579999987 665433211 22100233556667887 566653 33455566 544
No 117
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.56 E-value=5.1 Score=41.54 Aligned_cols=134 Identities=14% Similarity=0.155 Sum_probs=71.4
Q ss_pred EEcCCCcEEEEecc--eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCcccc
Q 035640 260 YLSPDGNLFIFSNN--RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYF 337 (596)
Q Consensus 260 ~~~~dG~Ifv~Gg~--~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 337 (596)
.+.+++++++.|+. ...+||..+.+....+ .+ ... .-.++.+ ..+++.+++|+.+
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~---~~-~~~---~v~~~~~----------~~~~~~l~sg~~d------ 331 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL---SG-HTD---RIYSTIY----------DHERKRCISASMD------ 331 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CC-CSS---CEEEEEE----------ETTTTEEEEEETT------
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe---cC-CCC---CEEEEEE----------cCCCCEEEEEeCC------
Confidence 44578888888875 4678999887654333 21 111 1111211 1256677777754
Q ss_pred ccccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCC
Q 035640 338 SETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPS 417 (596)
Q Consensus 338 ~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~ 417 (596)
..+..+|+. +.+-.. .+........++. .+++.++.|+.+ | ++.+||..+.
T Consensus 332 -----------g~i~vwd~~--~~~~~~-~~~~h~~~v~~~~-~~~~~l~s~s~d-g------------~v~vwd~~~~- 382 (464)
T 3v7d_B 332 -----------TTIRIWDLE--NGELMY-TLQGHTALVGLLR-LSDKFLVSAAAD-G------------SIRGWDANDY- 382 (464)
T ss_dssp -----------SCEEEEETT--TTEEEE-EECCCSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTC-
T ss_pred -----------CcEEEEECC--CCcEEE-EEeCCCCcEEEEE-EcCCEEEEEeCC-C------------cEEEEECCCC-
Confidence 234556654 222111 2222222233333 478888888764 1 5789998876
Q ss_pred CCceEEecCCCcccccceEEEEcCCCcEEEecC
Q 035640 418 RQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGS 450 (596)
Q Consensus 418 g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG 450 (596)
+-..... ... ......+-+||+++++|+
T Consensus 383 --~~~~~~~--~~~-~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 383 --SRKFSYH--HTN-LSAITTFYVSDNILVSGS 410 (464)
T ss_dssp --CEEEEEE--CTT-CCCEEEEEECSSEEEEEE
T ss_pred --ceeeeec--CCC-CccEEEEEeCCCEEEEec
Confidence 3211111 111 123345568999999987
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.55 E-value=4.2 Score=40.55 Aligned_cols=136 Identities=10% Similarity=0.064 Sum_probs=71.0
Q ss_pred EEEEeCCCCC-EEeCcCCCccccccCeecC--CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEcc
Q 035640 123 SVLFDFETSE-LTALKLQTDTWCSSGGLTA--DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLP 199 (596)
Q Consensus 123 ~~~yDp~t~~-w~~l~~~~~~fc~~~~~l~--dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~ 199 (596)
...||..+.+ .......+........+.+ +|+.+++|+.+ ..+++||.. +.+-..... ........+++.-+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d---g~i~~wd~~-~~~~~~~~~-~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 106 ITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR---GTIGFQSYE-DDSQYIVHS-AKSDVEYSSGVLHK 180 (343)
T ss_dssp EEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT---CCEEEEESS-SSCEEEEEC-CCSSCCCCEEEECT
T ss_pred eEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC---CcEEEEECC-CCcEEEEEe-cCCCCceEEEEECC
Confidence 3456666666 2222222221111233456 88999998864 468999987 554432211 12222244566678
Q ss_pred CCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc-eeEE
Q 035640 200 DGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-RSIL 277 (596)
Q Consensus 200 dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-~~e~ 277 (596)
||++++.|+.++ .+.+| .++.+-.. ..+..-+. .. --.+...++|+.++.|+. ...+
T Consensus 181 dg~~lasg~~dg-~i~iwd~~~~~~~~--~~~~~~h~----------~~--------v~~l~fs~~g~~l~s~~~~~v~i 239 (343)
T 3lrv_A 181 DSLLLALYSPDG-ILDVYNLSSPDQAS--SRFPVDEE----------AK--------IKEVKFADNGYWMVVECDQTVVC 239 (343)
T ss_dssp TSCEEEEECTTS-CEEEEESSCTTSCC--EECCCCTT----------SC--------EEEEEECTTSSEEEEEESSBEEE
T ss_pred CCCEEEEEcCCC-EEEEEECCCCCCCc--cEEeccCC----------CC--------EEEEEEeCCCCEEEEEeCCeEEE
Confidence 999999998764 56677 44331100 00100000 00 001223578988887764 4677
Q ss_pred ecCCCCe
Q 035640 278 LDPKANK 284 (596)
Q Consensus 278 yDp~t~~ 284 (596)
||..+.+
T Consensus 240 wd~~~~~ 246 (343)
T 3lrv_A 240 FDLRKDV 246 (343)
T ss_dssp EETTSST
T ss_pred EEcCCCC
Confidence 8887764
No 119
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.53 E-value=4.7 Score=41.01 Aligned_cols=58 Identities=14% Similarity=0.106 Sum_probs=36.9
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCce-EEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRF-KELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~W-t~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
..-|||+++++|+.+. ++.+||.++. +- ..+....... -.....-|||+.++.|+.++
T Consensus 276 ~~Spdg~~lasgs~D~-------------~V~iwd~~~~---~~~~~~~~gH~~~--V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 276 DVDMKGELAVLASNDN-------------SIALVKLKDL---SMSKIFKQAHSFA--ITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EECTTSCEEEEEETTS-------------CEEEEETTTT---EEEEEETTSSSSC--EEEEEECTTSCEEEEEETTS
T ss_pred EECCCCCceEEEcCCC-------------EEEEEECCCC---cEEEEecCcccCC--EEEEEECCCCCEEEEEeCCC
Confidence 3569999999998651 5789998776 32 1111111111 12344579999999998753
No 120
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.45 E-value=1.5 Score=44.49 Aligned_cols=120 Identities=10% Similarity=0.060 Sum_probs=57.1
Q ss_pred CeecCCCcEEEEcCCCCC---CCeEEEEeCCCCCc--eeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCC
Q 035640 147 GGLTADGDLVSTGGFGGG---ANTVRYLSTCDGCD--WREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPE 220 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g---~~~v~~fdP~~t~~--W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~ 220 (596)
..+-+||++|++|+.... ..++++|+.. +.. .......+...-.-.+++-.+|+++++.+ .+ .++.+| ..+
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~~-~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s-~d-g~v~lWd~~~ 124 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKDP-EGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS-DS-GAVELWEILE 124 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESSC-C---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-TT-SCEEEC----
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEECC-CCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-CC-CEEEEeeccc
Confidence 456789999999986422 1367888754 221 11110001111111234456688776644 33 456676 333
Q ss_pred CCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce--eEEecCCCCeEEE
Q 035640 221 GQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR--SILLDPKANKVVR 287 (596)
Q Consensus 221 ~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~--~e~yDp~t~~w~~ 287 (596)
++-. ....+. ... . ...--.+...+||+.++.|+.+ ..+||..+++...
T Consensus 125 ~~~~---~~~~~~-~~~------h--------~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 125 KESL---LVNKFA-KYE------H--------DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK 175 (357)
T ss_dssp -------CCCCEE-ECC------C--------SSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccee---EEEeec-cCC------C--------CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 2110 000000 000 0 0000012345799999988754 6789999887543
No 121
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.38 E-value=4.8 Score=40.51 Aligned_cols=75 Identities=15% Similarity=0.252 Sum_probs=44.0
Q ss_pred CCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCC--CcccccceEE
Q 035640 360 NAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAG--TIPRMYHSSS 437 (596)
Q Consensus 360 ~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~--~~~R~yhs~a 437 (596)
...|+....+..+.....+..++|++|+++.. | .+.+.+ ++.|++|+.+..- ......++.+
T Consensus 193 G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~--G------------~~~~s~--~D~G~tW~~~~~~~~~~~~~~~~v~ 256 (327)
T 2xbg_A 193 QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNG--G------------KIAFSD--PDNSENWGELLSPLRRNSVGFLDLA 256 (327)
T ss_dssp CSSCEEEECCSSSCEEEEEECTTSCEEEEETT--T------------EEEEEE--TTEEEEECCCBCTTSSCCSCEEEEE
T ss_pred CCceeECCCCCCCccceeEECCCCCEEEEeCC--c------------eEEEec--CCCCCeeEeccCCcccCCcceEEEE
Confidence 46898874444455555556789999988642 1 122332 3346689876532 2222233333
Q ss_pred EEcCCCcEEEecCC
Q 035640 438 VLLPDGTVLVAGSN 451 (596)
Q Consensus 438 ~LlpDG~Vlv~GG~ 451 (596)
..+++++|++|+.
T Consensus 257 -~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 257 -YRTPNEVWLAGGA 269 (327)
T ss_dssp -ESSSSCEEEEEST
T ss_pred -ecCCCEEEEEeCC
Confidence 4578999999864
No 122
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.36 E-value=3.6 Score=41.20 Aligned_cols=61 Identities=15% Similarity=0.203 Sum_probs=34.2
Q ss_pred ecC-CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEcc---CCcEEEEcCCCCCcEEEe
Q 035640 149 LTA-DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLP---DGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 149 ~l~-dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~---dG~VyViGG~~~~~~E~y 217 (596)
+.+ ++.++++|+.+ ..+++||.. +.+-... +.....-.+....+ ++.++++|+.++ .+.+|
T Consensus 107 ~~~~~~~~l~s~~~d---~~i~iwd~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~ 171 (408)
T 4a11_B 107 WYPHDTGMFTSSSFD---KTLKVWDTN-TLQTADV---FNFEETVYSHHMSPVSTKHCLVAVGTRGP-KVQLC 171 (408)
T ss_dssp ECTTCTTCEEEEETT---SEEEEEETT-TTEEEEE---EECSSCEEEEEECSSCSSCCEEEEEESSS-SEEEE
T ss_pred EccCCCcEEEEEeCC---CeEEEeeCC-CCcccee---ccCCCceeeeEeecCCCCCcEEEEEcCCC-eEEEE
Confidence 445 67788888754 568999986 5443322 11122222333343 445888877654 45566
No 123
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.34 E-value=5.6 Score=41.17 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=58.2
Q ss_pred EcCCCcEEEEecce--eEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccc
Q 035640 261 LSPDGNLFIFSNNR--SILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFS 338 (596)
Q Consensus 261 ~~~dG~Ifv~Gg~~--~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 338 (596)
..++|+.++.|+.+ ..+||..+++-...+ .+ ... .-.++. ..++.+++|+.+
T Consensus 318 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~---~~-h~~---~v~~~~------------~~~~~l~s~s~d------- 371 (464)
T 3v7d_B 318 YDHERKRCISASMDTTIRIWDLENGELMYTL---QG-HTA---LVGLLR------------LSDKFLVSAAAD------- 371 (464)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEE---CC-CSS---CEEEEE------------ECSSEEEEEETT-------
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCcEEEEE---eC-CCC---cEEEEE------------EcCCEEEEEeCC-------
Confidence 45788888888753 678999887654333 21 111 111111 246677777754
Q ss_pred cccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCC
Q 035640 339 ETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGP 416 (596)
Q Consensus 339 ~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~ 416 (596)
..+..+|+......+... ..........-++|+++++|+ + | .+.+||.++.
T Consensus 372 ----------g~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 372 ----------GSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp ----------SEEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred ----------CcEEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 234556665322222221 111222235578999998887 2 1 5789999887
No 124
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.25 E-value=1.2 Score=44.27 Aligned_cols=66 Identities=12% Similarity=-0.008 Sum_probs=37.8
Q ss_pred cCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEc-c--CCcEEEEcCCCCCcEEEe-CCCC
Q 035640 150 TADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTL-P--DGGFIVVGGRGAFSYEYI-PPEG 221 (596)
Q Consensus 150 l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L-~--dG~VyViGG~~~~~~E~y-P~~~ 221 (596)
.+||+.+++|+.+ ..+++||.. +.+...... +......-..+.. + +|++++.|+.+. ++.+| ..++
T Consensus 22 s~~g~~lasgs~D---~~v~lwd~~-~~~~~~~~~-l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-~v~iWd~~~~ 91 (316)
T 3bg1_A 22 DYYGTRLATCSSD---RSVKIFDVR-NGGQILIAD-LRGHEGPVWQVAWAHPMYGNILASCSYDR-KVIIWREENG 91 (316)
T ss_dssp CGGGCEEEEEETT---TEEEEEEEE-TTEEEEEEE-EECCSSCEEEEEECCGGGSSCEEEEETTS-CEEEECCSSS
T ss_pred cCCCCEEEEEeCC---CeEEEEEec-CCCcEEEEE-EcCCCccEEEEEeCCCCCCCEEEEEECCC-EEEEEECCCC
Confidence 4588999999864 578999976 544322211 2211111222333 2 478888888654 56677 5444
No 125
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.22 E-value=9.4 Score=43.26 Aligned_cols=252 Identities=12% Similarity=0.109 Sum_probs=123.9
Q ss_pred EEEEeCCCCCEEeCcCCC--------ccccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCceeecCc---CCCCcc
Q 035640 123 SVLFDFETSELTALKLQT--------DTWCSSGGLTADGD-LVSTGGFGGGANTVRYLSTCDGCDWREYPT---ALADPR 190 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~--------~~fc~~~~~l~dG~-ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~---~M~~~R 190 (596)
..+||+.+++++...... .....+.....+|+ |++ |... ..+.+||+. +.++..... .+...+
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~-~~~~~~~~~~~~~l~~~~ 453 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN-SGQVENFNQRNSQLVNEN 453 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT-TCCEEEECTTTSCCSCSC
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC-CCcEEEeecCCCCcCCCe
Confidence 567889888887654211 11111112235788 665 3332 347889998 777665431 122222
Q ss_pred cccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEE
Q 035640 191 WYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFI 269 (596)
Q Consensus 191 ~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv 269 (596)
-.+.+.-.+|++++... . ..-+| |.++++. .......... ...+.--....-.+|+|++
T Consensus 454 -v~~i~~d~~g~lwigt~-~--Gl~~~~~~~~~~~----~~~~~~~~~~------------~~~~~i~~i~~d~~g~lWi 513 (795)
T 4a2l_A 454 -VYAILPDGEGNLWLGTL-S--ALVRFNPEQRSFT----TIEKEKDGTP------------VVSKQITTLFRDSHKRLWI 513 (795)
T ss_dssp -EEEEEECSSSCEEEEES-S--CEEEEETTTTEEE----ECCBCTTCCB------------CCCCCEEEEEECTTCCEEE
T ss_pred -eEEEEECCCCCEEEEec-C--ceeEEeCCCCeEE----Eccccccccc------------cCCceEEEEEECCCCCEEE
Confidence 12333444688887543 2 24455 6655432 1100000000 0000001123346899998
Q ss_pred EecceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCC
Q 035640 270 FSNNRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQ 349 (596)
Q Consensus 270 ~Gg~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~ 349 (596)
.......+||+.++++ . +..... ....+......++ ...+++|++... .
T Consensus 514 gt~~Gl~~~~~~~~~~-~-~~~~~~-~~~l~~~~i~~i~---------~d~~g~lWigT~-~------------------ 562 (795)
T 4a2l_A 514 GGEEGLSVFKQEGLDI-Q-KASILP-VSNVTKLFTNCIY---------EASNGIIWVGTR-E------------------ 562 (795)
T ss_dssp EESSCEEEEEEETTEE-E-ECCCSC-SCGGGGSCEEEEE---------ECTTSCEEEEES-S------------------
T ss_pred EeCCceEEEeCCCCeE-E-EecCCC-CCCCCCCeeEEEE---------ECCCCCEEEEeC-C------------------
Confidence 7765678899988876 3 321000 0000001111111 113677776432 1
Q ss_pred ceEEEEeeCCCCceEee----cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEec
Q 035640 350 DCGRIDITKPNAVWKKE----RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELA 425 (596)
Q Consensus 350 s~~~id~~~~~~~W~~~----~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a 425 (596)
-..++|+. +.+++.. .|+...... .+.-.+|+|++.... -..+|||++. +++...
T Consensus 563 Gl~~~d~~--~~~~~~~~~~~gl~~~~i~~-i~~d~~g~lWi~t~~---------------Gl~~~~~~~~---~~~~~~ 621 (795)
T 4a2l_A 563 GFYCFNEK--DKQIKRYNTTNGLPNNVVYG-ILEDSFGRLWLSTNR---------------GISCFNPETE---KFRNFT 621 (795)
T ss_dssp CEEEEETT--TTEEEEECGGGTCSCSCEEE-EEECTTSCEEEEETT---------------EEEEEETTTT---EEEEEC
T ss_pred CceeECCC--CCcEEEeCCCCCCchhheEE-EEECCCCCEEEEcCC---------------ceEEEcCCCC---cEEEcC
Confidence 13345543 4444432 354433322 233457899886531 1368999998 887654
Q ss_pred C---CCcccccceEEEEcCCCcEEEecCC
Q 035640 426 A---GTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 426 ~---~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
. ++.......+++..+||++|++|.+
T Consensus 622 ~~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 622 ESDGLQSNQFNTASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp GGGTCSCSCEEEEEEEECTTSCEEEEETT
T ss_pred CcCCCccccCccCceeECCCCeEEEecCC
Confidence 3 3322332345566789999998764
No 126
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.96 E-value=5.9 Score=40.00 Aligned_cols=218 Identities=12% Similarity=0.142 Sum_probs=103.4
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCC--ceeecCcC-CC----CcccccEEEEccCCcEEEEcCCCCCcEEEe-C
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDGC--DWREYPTA-LA----DPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-P 218 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~--~W~~~~~~-M~----~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P 218 (596)
..++.+++||+.... ..+..||+. +. .|+..... .. ......+..++.+|+||+.... ..+-.+ +
T Consensus 48 ~p~v~~~~v~~~~~~----g~v~a~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~--g~l~a~d~ 120 (376)
T 3q7m_A 48 HPALADNVVYAADRA----GLVKALNAD-DGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK--AQVYALNT 120 (376)
T ss_dssp CCEEETTEEEEECTT----SEEEEEETT-TCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT--SEEEEEET
T ss_pred ccEEECCEEEEEcCC----CeEEEEEcc-CCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC--CEEEEEEC
Confidence 345568888887542 368899986 44 57643210 00 0122223444558888885432 223344 5
Q ss_pred CCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc-eeEEecCCCCe--EEEeeccccCC
Q 035640 219 PEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN-RSILLDPKANK--VVREFPILTGG 295 (596)
Q Consensus 219 ~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~-~~e~yDp~t~~--w~~~lp~mp~~ 295 (596)
++++- .|.. +.-.. ...-| ++.+|+||+.... ....||+.+++ |....+. +
T Consensus 121 ~tG~~--~W~~-~~~~~-----------------~~~~p---~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~-~-- 174 (376)
T 3q7m_A 121 SDGTV--AWQT-KVAGE-----------------ALSRP---VVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDM-P-- 174 (376)
T ss_dssp TTCCE--EEEE-ECSSC-----------------CCSCC---EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC----
T ss_pred CCCCE--EEEE-eCCCc-----------------eEcCC---EEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCC-C--
Confidence 44421 0110 00000 00011 2347778776543 46789988775 6432211 1
Q ss_pred CCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCc--
Q 035640 296 SRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPR-- 372 (596)
Q Consensus 296 ~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R-- 372 (596)
..........+ ..++.||+ |..+ ..+..+|+......|+.. ..+..+
T Consensus 175 ~~~~~~~~~~~------------~~~~~v~~-g~~~-----------------g~l~~~d~~tG~~~w~~~~~~~~~~~~ 224 (376)
T 3q7m_A 175 SLSLRGESAPT------------TAFGAAVV-GGDN-----------------GRVSAVLMEQGQMIWQQRISQATGSTE 224 (376)
T ss_dssp ----CCCCCCE------------EETTEEEE-CCTT-----------------TEEEEEETTTCCEEEEEECCC------
T ss_pred ceeecCCCCcE------------EECCEEEE-EcCC-----------------CEEEEEECCCCcEEEEEecccCCCCcc
Confidence 11000001111 13666666 3321 134557765444578765 433211
Q ss_pred ------cccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEE
Q 035640 373 ------VMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVL 446 (596)
Q Consensus 373 ------~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vl 446 (596)
... ..++.+|.||+.+... .+.++|+++.. ..|+.-.. ...+ ....+++||
T Consensus 225 ~~~~~~~~~-~p~~~~~~v~~~~~~g--------------~l~~~d~~tG~-~~w~~~~~-----~~~~--~~~~~~~l~ 281 (376)
T 3q7m_A 225 IDRLSDVDT-TPVVVNGVVFALAYNG--------------NLTALDLRSGQ-IMWKRELG-----SVND--FIVDGNRIY 281 (376)
T ss_dssp -----CCCC-CCEEETTEEEEECTTS--------------CEEEEETTTCC-EEEEECCC-----CEEE--EEEETTEEE
T ss_pred cccccccCC-CcEEECCEEEEEecCc--------------EEEEEECCCCc-EEeeccCC-----CCCC--ceEECCEEE
Confidence 222 2345588888764211 35789988762 24764311 1122 334588998
Q ss_pred EecC
Q 035640 447 VAGS 450 (596)
Q Consensus 447 v~GG 450 (596)
++..
T Consensus 282 ~~~~ 285 (376)
T 3q7m_A 282 LVDQ 285 (376)
T ss_dssp EEET
T ss_pred EEcC
Confidence 8764
No 127
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.69 E-value=2.9 Score=40.38 Aligned_cols=140 Identities=16% Similarity=0.289 Sum_probs=72.4
Q ss_pred cceEEEc--CCCcEEEEe---cceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCc
Q 035640 256 YPFVYLS--PDGNLFIFS---NNRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGA 330 (596)
Q Consensus 256 yp~~~~~--~dG~Ifv~G---g~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~ 330 (596)
+|...++ .+|+||+.. +....+||+.... .+.+.. . ....| .+.++ ..+++||++...
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~-~~~~~~-~--~~~~~-~~i~~------------~~~g~l~v~~~~ 140 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQF-VRKFGA-T--ILQHP-RGVTV------------DNKGRIIVVECK 140 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTTSCE-EEEECT-T--TCSCE-EEEEE------------CTTSCEEEEETT
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcE-EEEecC-c--cCCCc-eEEEE------------eCCCCEEEEECC
Confidence 4555555 689999987 3457789965443 333421 1 11111 11221 136788887543
Q ss_pred cCCccccccccccccCCCCceEEEEeeCCCCceEee----cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCc
Q 035640 331 QWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE----RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNL 406 (596)
Q Consensus 331 ~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~----~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~ 406 (596)
. ..+.++|+. ....... .+..+ .+.++-+||+||+.+..+ .
T Consensus 141 ~-----------------~~i~~~~~~--g~~~~~~~~~~~~~~p---~~i~~~~~g~l~v~~~~~-------------~ 185 (286)
T 1q7f_A 141 V-----------------MRVIIFDQN--GNVLHKFGCSKHLEFP---NGVVVNDKQEIFISDNRA-------------H 185 (286)
T ss_dssp T-----------------TEEEEECTT--SCEEEEEECTTTCSSE---EEEEECSSSEEEEEEGGG-------------T
T ss_pred C-----------------CEEEEEcCC--CCEEEEeCCCCccCCc---EEEEECCCCCEEEEECCC-------------C
Confidence 2 234455532 2211111 12222 223456789999876432 1
Q ss_pred ccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 407 VPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 407 s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
.+.+||++.. ....+..-.. -.+.....+-+||++||+...
T Consensus 186 ~i~~~~~~g~---~~~~~~~~g~-~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 186 CVKVFNYEGQ---YLRQIGGEGI-TNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp EEEEEETTCC---EEEEESCTTT-SCSEEEEEECTTCCEEEEECS
T ss_pred EEEEEcCCCC---EEEEEccCCc-cCCCcEEEECCCCCEEEEeCC
Confidence 5789998665 4444432110 011223445689999999754
No 128
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.69 E-value=6.3 Score=40.23 Aligned_cols=111 Identities=15% Similarity=0.275 Sum_probs=58.9
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceee-cCcC---------C------CCcccccEEEEccCCcEEEEcCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWRE-YPTA---------L------ADPRWYSTQVTLPDGGFIVVGGRGA 211 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~-~~~~---------M------~~~R~y~s~~~L~dG~VyViGG~~~ 211 (596)
.+.+||+.+++|.. +.+++||.. +.+... +... + ....+-.+++.-+||+.++.|+.++
T Consensus 71 ~fspdg~~la~g~~----~~v~i~~~~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~ 145 (393)
T 1erj_A 71 KFSNDGEYLATGCN----KTTQVYRVS-DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDR 145 (393)
T ss_dssp EECTTSSEEEEECB----SCEEEEETT-TCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCCEEEEEcC----CcEEEEEec-CCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCC
Confidence 45679999999763 457888875 443321 1100 0 0011122445557899999988654
Q ss_pred CcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEecCCCCeEE
Q 035640 212 FSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILLDPKANKVV 286 (596)
Q Consensus 212 ~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~yDp~t~~w~ 286 (596)
.+.+| ..+.+ ....+... .. ..+ .+...++|+.++.|+. ...+||..+++..
T Consensus 146 -~i~iwd~~~~~------~~~~~~~h--------~~-------~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 146 -LIRIWDIENRK------IVMILQGH--------EQ-------DIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp -CEEEEETTTTE------EEEEECCC--------SS-------CEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred -eEEEEECCCCc------EEEEEccC--------CC-------CEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 46666 33221 00001000 00 001 1223578888888765 4678999887754
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.64 E-value=7.7 Score=40.23 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=39.4
Q ss_pred eEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 377 MVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 377 avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
...-|||+.+++++...+ ...+.+||.++. +...+.... .......-|||+.++.++...
T Consensus 316 ~~~spdG~~l~~~~~~~g----------~~~i~~~d~~~~---~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 316 ADVSSDGKFMVMVSSNGG----------QQHIAKQDLATG---GVQVLSSTF----LDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp EEECTTSSEEEEEEECSS----------CEEEEEEETTTC---CEEECCCSS----SCEEEEECTTSSEEEEEEEET
T ss_pred eEECCCCCEEEEEECcCC----------ceEEEEEECCCC---CEEEecCCC----CcCCeEEcCCCCEEEEEEcCC
Confidence 345699998887765421 236789999988 666554332 223445679999888887543
No 130
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.49 E-value=5.1 Score=39.04 Aligned_cols=58 Identities=19% Similarity=0.213 Sum_probs=33.8
Q ss_pred ecCC-CcEEEEcCCCCCCCeEEEEeCCCCCcee---ecCcCCCC-cccccEEEEccCCcEEEEcCCCC
Q 035640 149 LTAD-GDLVSTGGFGGGANTVRYLSTCDGCDWR---EYPTALAD-PRWYSTQVTLPDGGFIVVGGRGA 211 (596)
Q Consensus 149 ~l~d-G~ilv~GG~~~g~~~v~~fdP~~t~~W~---~~~~~M~~-~R~y~s~~~L~dG~VyViGG~~~ 211 (596)
+.++ ++++++||.+ ..|+++|.. +.+.. ... .+.. ...-.+++.-+||+.++.|+.++
T Consensus 46 ~sp~~~~~l~S~s~D---~~i~vWd~~-~~~~~~~~~~~-~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 46 TTPQFPDMILSASRD---KTIIMWKLT-RDETNYGIPQR-ALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp ECTTCTTEEEEEETT---SCEEEEEEC-CSSSCSEEEEE-EECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeCCCCCEEEEEcCC---CeEEEEECC-CCCcccceeeE-EEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 3445 6899999865 468888875 33221 111 1221 12223445567899999988764
No 131
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.47 E-value=6.5 Score=38.87 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=26.1
Q ss_pred ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCcee
Q 035640 141 DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWR 180 (596)
Q Consensus 141 ~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~ 180 (596)
..|..+-.+. |+++|+..|.. +..+++.+|+. +.+=.
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~-g~S~v~~vD~~-Tgkv~ 78 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLN-GRSSIRKVDIE-SGKTL 78 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEET-TEEEEEEECTT-TCCEE
T ss_pred CcccceEEEE-CCEEEEECCCC-CCceEEEEECC-CCcEE
Confidence 4455555544 89999998864 34689999998 66543
No 132
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.14 E-value=5.1 Score=39.68 Aligned_cols=187 Identities=9% Similarity=-0.006 Sum_probs=98.9
Q ss_pred cEEEEccCCcEEEEcCCC-CCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEE
Q 035640 193 STQVTLPDGGFIVVGGRG-AFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIF 270 (596)
Q Consensus 193 ~s~~~L~dG~VyViGG~~-~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~ 270 (596)
++.+.-+||++|+..|.. ...+..+ +++++-. ...++ +...++..+...+++||+.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~---~~i~l-------------------~~~~fgeGi~~~g~~lyv~ 81 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVE---NIHKM-------------------DDSYFGEGLTLLNEKLYQV 81 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEE---EEEEC-------------------CTTCCEEEEEEETTEEEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEE---EEEec-------------------CCCcceEEEEEeCCEEEEE
Confidence 455555569999998753 3556666 6655210 01111 1123445555667799998
Q ss_pred ec--ceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCC
Q 035640 271 SN--NRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPAL 348 (596)
Q Consensus 271 Gg--~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~ 348 (596)
.. +.+.+||+.+.+....++. + .. .|.++. ....++|++-|.
T Consensus 82 t~~~~~v~viD~~t~~v~~~i~~---g-~~---~g~glt-----------~Dg~~l~vs~gs------------------ 125 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKNFTH---Q-MK---DGWGLA-----------TDGKILYGSDGT------------------ 125 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEEEEC---C-SS---SCCEEE-----------ECSSSEEEECSS------------------
T ss_pred EecCCEEEEEECCCCcEEEEEEC---C-CC---CeEEEE-----------ECCCEEEEECCC------------------
Confidence 74 4578899999876554532 1 00 222321 135668877542
Q ss_pred CceEEEEeeCCCCceEe-e---cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEe
Q 035640 349 QDCGRIDITKPNAVWKK-E---RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKEL 424 (596)
Q Consensus 349 ~s~~~id~~~~~~~W~~-~---~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~ 424 (596)
+.+..+|+. +.+-.. . ..+.+-...+.+...||+||+....+ .++-+-||++.+-..|-.+
T Consensus 126 ~~l~viD~~--t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~-------------~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 126 SILYEIDPH--TFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQT-------------DCIARISAKDGTLLGWILL 190 (266)
T ss_dssp SEEEEECTT--TCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTS-------------SEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECC--CCcEEEEEEECCCCcccccceeEEEECCEEEEecCCC-------------CeEEEEECCCCcEEEEEEC
Confidence 234556654 322111 1 11122122233444499999875432 1577889999844344444
Q ss_pred cCCC-------cc--cccceEEEEcCC-CcEEEecCCCC
Q 035640 425 AAGT-------IP--RMYHSSSVLLPD-GTVLVAGSNTH 453 (596)
Q Consensus 425 a~~~-------~~--R~yhs~a~LlpD-G~Vlv~GG~~~ 453 (596)
+.+. .+ -.-++.|. .+| .++||+|+.-.
T Consensus 191 ~g~~~~~~~~~~~~~~v~nGIa~-~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 191 PNLRKKLIDEGFRDIDVLNGIAW-DQENKRIFVTGKLWP 228 (266)
T ss_dssp HHHHHHHHHTTCTTCCCEEEEEE-ETTTTEEEEEETTCS
T ss_pred CCcccccccccccccCceEEEEE-cCCCCEEEEECCCCC
Confidence 3210 00 01245554 455 47999987644
No 133
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.00 E-value=2.8 Score=41.19 Aligned_cols=66 Identities=11% Similarity=0.175 Sum_probs=35.0
Q ss_pred ecCCC-cEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccC---CcEEEEcCCCCCcEEEe
Q 035640 149 LTADG-DLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPD---GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 149 ~l~dG-~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~d---G~VyViGG~~~~~~E~y 217 (596)
+.++| +++++|+...+...+++||.. +.+...... ......-.+++..++ |+.++.|+.++ .+.+|
T Consensus 26 ~~p~~~~l~~~~s~~~~d~~v~iw~~~-~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~iw 95 (357)
T 3i2n_A 26 WVPCSAKFVTMGNFARGTGVIQLYEIQ-HGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGG-NLHIW 95 (357)
T ss_dssp ECTTSSEEEEEEC--CCCEEEEEEEEC-SSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTS-CEEEE
T ss_pred EcCCCceEEEecCccCCCcEEEEEeCC-CCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCC-eEEEE
Confidence 34566 566777652223578999987 655433211 111122223334445 68888887654 45666
No 134
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.95 E-value=9.4 Score=39.21 Aligned_cols=87 Identities=15% Similarity=0.168 Sum_probs=48.3
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPD 200 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~d 200 (596)
.+.+||..+++.......+...+ ..+..++.++++|+.+ ..+.++|.. ...... .. +. ....-......++
T Consensus 170 ~v~iWd~~~~~~~~~~~~h~~~v--~~~s~~~~~l~sgs~d---~~i~~~d~~-~~~~~~-~~-~~~h~~~~~~~~~~~~ 241 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTSHSARV--GSLSWNSYILSSGSRS---GHIHHHDVR-VAEHHV-AT-LSGHSQEVCGLRWAPD 241 (420)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT-SSSCEE-EE-EECCSSCEEEEEECTT
T ss_pred eEEEEEcCCCcEEEEEeCCCCce--EEEeeCCCEEEEEeCC---CceeEeeec-ccceee-EE-ecccccceeeeeecCC
Confidence 46889988876543322222222 2234588999998864 467888865 322211 11 11 1112234455668
Q ss_pred CcEEEEcCCCCCcEEEe
Q 035640 201 GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 201 G~VyViGG~~~~~~E~y 217 (596)
|+.++.|+.++ .+.+|
T Consensus 242 g~~l~s~~~D~-~v~i~ 257 (420)
T 4gga_A 242 GRHLASGGNDN-LVNVW 257 (420)
T ss_dssp SSEEEEEETTS-CEEEE
T ss_pred CCeeeeeeccc-cceEE
Confidence 89988888764 34455
No 135
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.72 E-value=11 Score=39.23 Aligned_cols=60 Identities=7% Similarity=-0.027 Sum_probs=33.2
Q ss_pred CeecCCCcEE-EEcCCCCCCCeEEEEeCCCCCceeecCcCC---CCcccccEEEEccCCcEEEEcCCCC
Q 035640 147 GGLTADGDLV-STGGFGGGANTVRYLSTCDGCDWREYPTAL---ADPRWYSTQVTLPDGGFIVVGGRGA 211 (596)
Q Consensus 147 ~~~l~dG~il-v~GG~~~g~~~v~~fdP~~t~~W~~~~~~M---~~~R~y~s~~~L~dG~VyViGG~~~ 211 (596)
..+.+||+.+ ++|+.+ ..+++||.. ......... + ..+..-.+++.-+||+.+++|+.++
T Consensus 108 ~~~s~d~~~l~~~~~~d---g~v~iwd~~-~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~~g 171 (450)
T 2vdu_B 108 LRLTSDESRLIACADSD---KSLLVFDVD-KTSKNVLKL-RKRFCFSKRPNAISIAEDDTTVIIADKFG 171 (450)
T ss_dssp EEECTTSSEEEEEEGGG---TEEEEEEEC-SSSSSCEEE-EEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEcCCCCEEEEEECCC---CeEEEEECc-CCCCceeee-eecccCCCCceEEEEcCCCCEEEEEeCCC
Confidence 3456788885 777653 468888864 212211111 1 1112222445567899998887643
No 136
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=92.66 E-value=7.5 Score=41.54 Aligned_cols=65 Identities=5% Similarity=-0.108 Sum_probs=40.5
Q ss_pred cccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC----ceeecCcCCCCcc-c-ccEEEEcc--CCcEEEEcCCCCCcEE
Q 035640 144 CSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGC----DWREYPTALADPR-W-YSTQVTLP--DGGFIVVGGRGAFSYE 215 (596)
Q Consensus 144 c~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~----~W~~~~~~M~~~R-~-y~s~~~L~--dG~VyViGG~~~~~~E 215 (596)
.....+.+||+.+++|+. ..+.+||.. +. +-.. .+.... . -.+++.-+ ||+.++.|+.++ .+.
T Consensus 21 v~~~~~spdg~~l~~~~~----~~v~v~~~~-~~~~~~~~~~---~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg-~v~ 91 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPCG----KSAFVRCLD-DGDSKVPPVV---QFTGHGSSVVTTVKFSPIKGSQYLCSGDESG-KVI 91 (615)
T ss_dssp CCCCEEETTTTEEEEEET----TEEEEEECC-SSCCSSCSEE---EECTTTTSCEEEEEECSSTTCCEEEEEETTS-EEE
T ss_pred eeEEEECCCCCEEEEecC----CeEEEEECC-CCCCccccce---EEecCCCceEEEEEECcCCCCCEEEEecCCC-EEE
Confidence 334566789999999872 479999986 44 2111 132222 2 23455667 899999988753 455
Q ss_pred Ee
Q 035640 216 YI 217 (596)
Q Consensus 216 ~y 217 (596)
+|
T Consensus 92 vw 93 (615)
T 1pgu_A 92 VW 93 (615)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 137
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.66 E-value=12 Score=41.50 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=35.3
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
...|||++++.|+.+ | ++.+||..+. +- +..+.....-+ +...-||++++++++.
T Consensus 568 ~~spdg~~l~sg~~D-g------------~i~iwd~~~~---~~--~~~~~~~~~v~-~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 568 AVSPDGSLCASGGKD-G------------VVLLWDLAEG---KK--LYSLEANSVIH-ALCFSPNRYWLCAATE 622 (694)
T ss_dssp EECTTSSEEEEEETT-S------------BCEEEETTTT---EE--EECCBCSSCEE-EEEECSSSSEEEEEET
T ss_pred EEeCCCCEEEEEeCC-C------------eEEEEECCCC---ce--EEEecCCCcEE-EEEEcCCCcEEEEEcC
Confidence 457899999999865 1 5689998776 32 22222222222 3445789999888754
No 138
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.65 E-value=8.3 Score=37.86 Aligned_cols=56 Identities=11% Similarity=-0.003 Sum_probs=34.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcC
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGG 208 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG 208 (596)
.+..++|+|++++... ..+.+||+. +.++..... .....-.+.+.-+||++|+...
T Consensus 50 ~~~~~~g~l~~~~~~~---~~i~~~d~~-~~~~~~~~~--~~~~~~~~i~~~~dg~l~v~~~ 105 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFE---GNIFKINPE-TKEIKRPFV--SHKANPAAIKIHKDGRLFVCYL 105 (333)
T ss_dssp EEECTTSCEEEEETTT---CEEEEECTT-TCCEEEEEE--CSSSSEEEEEECTTSCEEEEEC
T ss_pred cEECCCCCEEEEECCC---CEEEEEeCC-CCcEEEEee--CCCCCcceEEECCCCcEEEEeC
Confidence 3445789999887643 468999998 776654321 1112122344456899988754
No 139
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.63 E-value=7.8 Score=37.48 Aligned_cols=65 Identities=11% Similarity=-0.030 Sum_probs=36.4
Q ss_pred ecCCCcEEEE-------cCCCCCCCeEEEEeCCCCCceeecCcC-CC-CcccccEEEEccC-CcEEEEcCCCCCcEEEe-
Q 035640 149 LTADGDLVST-------GGFGGGANTVRYLSTCDGCDWREYPTA-LA-DPRWYSTQVTLPD-GGFIVVGGRGAFSYEYI- 217 (596)
Q Consensus 149 ~l~dG~ilv~-------GG~~~g~~~v~~fdP~~t~~W~~~~~~-M~-~~R~y~s~~~L~d-G~VyViGG~~~~~~E~y- 217 (596)
+..+|++|++ +.. ...+.+||+. +.++.....+ .. ....-.+.+.-++ |++||..... .+..|
T Consensus 25 ~~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~~~d 98 (314)
T 1pjx_A 25 FDKNGDFYIVAPEVEVNGKP---AGEILRIDLK-TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLLVVQ 98 (314)
T ss_dssp ECTTSCEEEEETTCEETTEE---CCEEEEECTT-TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EEEEEE
T ss_pred ECCCCCEEEEEeccccCCCC---CCEEEEEeCC-CCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--CEEEEe
Confidence 3468899988 322 2468999987 7776543210 00 1112234445567 8999876422 34455
Q ss_pred CC
Q 035640 218 PP 219 (596)
Q Consensus 218 P~ 219 (596)
+.
T Consensus 99 ~~ 100 (314)
T 1pjx_A 99 TD 100 (314)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.62 E-value=6.8 Score=36.82 Aligned_cols=81 Identities=14% Similarity=0.142 Sum_probs=49.6
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCC-CceeecCcCCCCcccccEEEEccC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDG-CDWREYPTALADPRWYSTQVTLPD 200 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t-~~W~~~~~~M~~~R~y~s~~~L~d 200 (596)
...+||+.+++...+... ........+.+||+.+++++. ..+.++|.. + .+...... ..........+.-+|
T Consensus 23 ~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNSE----GLLYRLSLA-GDPSPEKVDT-GFATICNNDHGISPD 95 (297)
T ss_dssp EEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEET----TEEEEEESS-SCCSCEECCC-TTCCCBCSCCEECTT
T ss_pred eEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEcC----CeEEEEeCC-CCCCceEecc-ccccccccceEECCC
Confidence 467889888877654322 222223456789998888753 479999987 6 55554432 221122233455679
Q ss_pred CcEEEEcCC
Q 035640 201 GGFIVVGGR 209 (596)
Q Consensus 201 G~VyViGG~ 209 (596)
|+.++.++.
T Consensus 96 g~~l~~~~~ 104 (297)
T 2ojh_A 96 GALYAISDK 104 (297)
T ss_dssp SSEEEEEEC
T ss_pred CCEEEEEEe
Confidence 988887764
No 141
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.48 E-value=10 Score=38.43 Aligned_cols=143 Identities=13% Similarity=0.095 Sum_probs=71.4
Q ss_pred EcCCCcEEEEec----ceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccc
Q 035640 261 LSPDGNLFIFSN----NRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFY 336 (596)
Q Consensus 261 ~~~dG~Ifv~Gg----~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 336 (596)
..|||++.+++. ....+||+.+.+....+. ..... .++.+ ..++++++.|+.+
T Consensus 141 fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~---~~~~V-----~~v~f----------spdg~~l~s~s~~----- 197 (365)
T 4h5i_A 141 ISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE---TRGEV-----KDLHF----------STDGKVVAYITGS----- 197 (365)
T ss_dssp ECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE---CSSCC-----CEEEE----------CTTSSEEEEECSS-----
T ss_pred EcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC---CCCce-----EEEEE----------ccCCceEEeccce-----
Confidence 458999876643 236789999887653331 11111 12211 1367777776532
Q ss_pred cccccccccCCCCceEEEEeeCCCCceEee-cCCCCcccc-ceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCC
Q 035640 337 FSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMG-DMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPR 414 (596)
Q Consensus 337 ~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~-~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~ 414 (596)
...+++.. +.+.... ......... .....|||+.++.++.+.+ ....+..||..
T Consensus 198 -------------~~~~~~~~--~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~---------~~~~i~~~~~~ 253 (365)
T 4h5i_A 198 -------------SLEVISTV--TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG---------KGIVLTKISIK 253 (365)
T ss_dssp -------------CEEEEETT--TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS---------CCEEEEEEEEE
T ss_pred -------------eEEEEEec--cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc---------ceeEEeecccc
Confidence 22344433 2222222 111111111 2234789999999876521 11245667765
Q ss_pred CCCCCceEEecCCCcc--cccceEEEEcCCCcEEEecCCCC
Q 035640 415 GPSRQRFKELAAGTIP--RMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 415 t~~g~~Wt~~a~~~~~--R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
.. ........... ...-.+...-|||+.+++|+...
T Consensus 254 ~~---~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 254 SG---NTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp TT---EEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred cc---eecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 55 44322111111 11112334569999999998753
No 142
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.46 E-value=8.6 Score=37.55 Aligned_cols=61 Identities=15% Similarity=0.121 Sum_probs=35.3
Q ss_pred ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEE
Q 035640 141 DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVV 206 (596)
Q Consensus 141 ~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyVi 206 (596)
..|..|-. ..++++|+..|.. +..+++.+|+. +.+=..... +...-...+.+.. ++++|++
T Consensus 20 ~~ftqGL~-~~~~~LyestG~~-g~S~v~~vD~~-tgkv~~~~~-l~~~~fgeGi~~~-~~~ly~l 80 (243)
T 3mbr_X 20 TAFTEGLF-YLRGHLYESTGET-GRSSVRKVDLE-TGRILQRAE-VPPPYFGAGIVAW-RDRLIQL 80 (243)
T ss_dssp TCCEEEEE-EETTEEEEEECCT-TSCEEEEEETT-TCCEEEEEE-CCTTCCEEEEEEE-TTEEEEE
T ss_pred ccccccEE-EECCEEEEECCCC-CCceEEEEECC-CCCEEEEEe-CCCCcceeEEEEe-CCEEEEE
Confidence 34554444 3468999998864 45789999998 665443221 3322222333333 6677765
No 143
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.45 E-value=9.7 Score=38.18 Aligned_cols=74 Identities=14% Similarity=0.207 Sum_probs=42.7
Q ss_pred CCceEeec---CCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecC-CCcccccce
Q 035640 360 NAVWKKER---MPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAA-GTIPRMYHS 435 (596)
Q Consensus 360 ~~~W~~~~---M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~-~~~~R~yhs 435 (596)
...|+... ++........+..+++++|++|+.. .+|- .+|.|++|+.+.. ...+..+++
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g----------------~i~~-S~DgG~tW~~~~~~~~~~~~~~~ 297 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG----------------ALLC-SQDGGQTWQQDVDVKKVPSNFYK 297 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT----------------CEEE-ESSTTSSCEECGGGTTSSSCCCE
T ss_pred CCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC----------------eEEE-eCCCCcccEEcCccCCCCCCeEE
Confidence 45788763 3333223332345689999987632 0221 1345679998764 344445566
Q ss_pred EEEEcCCCcEEEecCC
Q 035640 436 SSVLLPDGTVLVAGSN 451 (596)
Q Consensus 436 ~a~LlpDG~Vlv~GG~ 451 (596)
++.. .+++++++|..
T Consensus 298 v~~~-~~~~~~~~G~~ 312 (327)
T 2xbg_A 298 ILFF-SPDQGFILGQK 312 (327)
T ss_dssp EEEE-ETTEEEEECST
T ss_pred EEEE-CCCceEEEcCC
Confidence 6554 67888877753
No 144
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.09 E-value=11 Score=39.16 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=17.4
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCC
Q 035640 382 TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGP 416 (596)
Q Consensus 382 dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~ 416 (596)
||+.++.|+.+. ++.+||..+.
T Consensus 251 d~~~l~s~~~d~-------------~v~vwd~~~~ 272 (450)
T 2vdu_B 251 KDYLLLSAGGDD-------------KIFAWDWKTG 272 (450)
T ss_dssp STTEEEEEESSS-------------EEEEEETTTC
T ss_pred CCCEEEEEeCCC-------------eEEEEECCCC
Confidence 899999988541 5789998876
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.09 E-value=9.1 Score=37.04 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=20.2
Q ss_pred EEcCCCcEEEEecceeEEecCCCCeEEEee
Q 035640 260 YLSPDGNLFIFSNNRSILLDPKANKVVREF 289 (596)
Q Consensus 260 ~~~~dG~Ifv~Gg~~~e~yDp~t~~w~~~l 289 (596)
...+||+.+++++....+||..+++....+
T Consensus 141 ~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 141 AWARDGSKLYGLGRDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp EECTTSSCEEEESSSEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEeCCeEEEEECCCCcEeeee
Confidence 356788844444667888999988765333
No 146
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.07 E-value=9.6 Score=39.30 Aligned_cols=58 Identities=14% Similarity=0.150 Sum_probs=36.6
Q ss_pred CCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 151 ADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 151 ~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
.||+.+++|+.+ ..+++||.. +.+-... +......-..... |++.++.|+.++ .+.+|
T Consensus 141 ~d~~~l~~g~~d---g~i~iwd~~-~~~~~~~---~~~h~~~v~~l~~-~~~~l~sg~~dg-~i~vw 198 (435)
T 1p22_A 141 YDDQKIVSGLRD---NTIKIWDKN-TLECKRI---LTGHTGSVLCLQY-DERVIITGSSDS-TVRVW 198 (435)
T ss_dssp CCSSEEEEEESS---SCEEEEESS-SCCEEEE---ECCCSSCEEEEEC-CSSEEEEEETTS-CEEEE
T ss_pred ECCCEEEEEeCC---CeEEEEeCC-CCeEEEE---EcCCCCcEEEEEE-CCCEEEEEcCCC-eEEEE
Confidence 488999999864 468999976 5433221 3222223344445 899999988764 45666
No 147
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.99 E-value=8.8 Score=36.67 Aligned_cols=60 Identities=13% Similarity=0.115 Sum_probs=36.7
Q ss_pred CCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 151 ADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 151 ~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
+++..+++|+.+ ..+++||.. +.+-...-. . ....-.+.+..++|+.+++|+.++. +.+|
T Consensus 27 ~~~~~l~s~~~d---g~v~vw~~~-~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~ 86 (313)
T 3odt_A 27 VDDSKVASVSRD---GTVRLWSKD-DQWLGTVVY-T-GQGFLNSVCYDSEKELLLFGGKDTM-INGV 86 (313)
T ss_dssp EETTEEEEEETT---SEEEEEEES-SSEEEEEEE-E-CSSCEEEEEEETTTTEEEEEETTSC-EEEE
T ss_pred cCCCEEEEEEcC---CcEEEEECC-CCEEEEEee-c-CCccEEEEEECCCCCEEEEecCCCe-EEEE
Confidence 688888888764 568999976 443222111 1 1222334556678999999987643 4444
No 148
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.62 E-value=5.5 Score=40.86 Aligned_cols=65 Identities=6% Similarity=0.078 Sum_probs=38.0
Q ss_pred CeecC-CCcEEEEcCCCCCCCeEEEEeCCCC---Cc-eeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 147 GGLTA-DGDLVSTGGFGGGANTVRYLSTCDG---CD-WREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 147 ~~~l~-dG~ilv~GG~~~g~~~v~~fdP~~t---~~-W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
..+.+ ||.++++|+.+ ..+++||.. + .. +.... .+.....-.+++..++++.++.|+.++ .+.+|
T Consensus 69 ~~~s~~~~~~l~s~s~d---g~v~vwd~~-~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~dg-~i~vw 138 (437)
T 3gre_A 69 SAVSPGETPYLITGSDQ---GVIKIWNLK-EIIVGEVYSSSL-TYDCSSTVTQITMIPNFDAFAVSSKDG-QIIVL 138 (437)
T ss_dssp EEEECSSSCEEEEEETT---SEEEEEEHH-HHHTTCCCSCSE-EEECSSCEEEEEECTTSSEEEEEETTS-EEEEE
T ss_pred EEECCCCCCEEEEecCC---ceEEEeECc-ccccCcccceee-eccCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Confidence 34567 89999999864 578999865 3 21 11000 011122233455667889999888764 34444
No 149
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.56 E-value=11 Score=37.03 Aligned_cols=136 Identities=18% Similarity=0.182 Sum_probs=69.2
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEcc--
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLP-- 199 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~-- 199 (596)
...+||..+++....-..+........+.+++.++++|+.+ ..+++||.. ...-..+. ....+-.+....+
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~-~~~~~~~~---~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK-GQCLATLL---GHNDWVSQVRVVPNE 160 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT-SCEEEEEC---CCSSCEEEEEECCC-
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC-CCeEEEEe---ccCCcEEEEEEccCC
Confidence 36788888776432211122222223456789999999865 568899976 33222211 1112222233333
Q ss_pred ----CCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecce
Q 035640 200 ----DGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNNR 274 (596)
Q Consensus 200 ----dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~~ 274 (596)
++..++.|+.+ ..+.+| ....+ ....+.... .. --.+...++|++++.|+.+
T Consensus 161 ~~~~~~~~l~s~~~d-~~i~~wd~~~~~-----~~~~~~~h~----------------~~-v~~~~~sp~g~~l~s~~~d 217 (319)
T 3frx_A 161 KADDDSVTIISAGND-KMVKAWNLNQFQ-----IEADFIGHN----------------SN-INTLTASPDGTLIASAGKD 217 (319)
T ss_dssp -----CCEEEEEETT-SCEEEEETTTTE-----EEEEECCCC----------------SC-EEEEEECTTSSEEEEEETT
T ss_pred CCCCCccEEEEEeCC-CEEEEEECCcch-----hheeecCCC----------------Cc-EEEEEEcCCCCEEEEEeCC
Confidence 34567777655 345666 32210 000000000 00 0123345899999998764
Q ss_pred --eEEecCCCCeEEE
Q 035640 275 --SILLDPKANKVVR 287 (596)
Q Consensus 275 --~e~yDp~t~~w~~ 287 (596)
..+||..+.+-..
T Consensus 218 g~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 218 GEIMLWNLAAKKAMY 232 (319)
T ss_dssp CEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCcEEE
Confidence 6789998876443
No 150
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.30 E-value=4 Score=40.90 Aligned_cols=25 Identities=12% Similarity=0.227 Sum_probs=18.9
Q ss_pred CeecC-CCcEEEEcCCCCCCCeEEEEeCC
Q 035640 147 GGLTA-DGDLVSTGGFGGGANTVRYLSTC 174 (596)
Q Consensus 147 ~~~l~-dG~ilv~GG~~~g~~~v~~fdP~ 174 (596)
..+.+ +|+++++|+.+ ..+++||..
T Consensus 49 ~~~s~~~~~~l~~~~~d---g~i~iw~~~ 74 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSD---GVIVLYDLE 74 (408)
T ss_dssp EEECTTTCCEEEEEETT---SCEEEEECC
T ss_pred EEEecCCCCEEEEEcCC---CeEEEEECC
Confidence 34556 89999999864 468999976
No 151
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.30 E-value=7 Score=39.19 Aligned_cols=29 Identities=17% Similarity=0.437 Sum_probs=20.4
Q ss_pred EcCCCcEEEEecce-----eEEecCCCCeEEEee
Q 035640 261 LSPDGNLFIFSNNR-----SILLDPKANKVVREF 289 (596)
Q Consensus 261 ~~~dG~Ifv~Gg~~-----~e~yDp~t~~w~~~l 289 (596)
..++|++++.|+.+ ..+||..+.+-...+
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 35789988888754 567898877654333
No 152
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.24 E-value=16 Score=38.04 Aligned_cols=111 Identities=12% Similarity=0.010 Sum_probs=56.3
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc-EEEEcCCCCCcEEEe-CCCCCCC
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG-FIVVGGRGAFSYEYI-PPEGQSN 224 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~-VyViGG~~~~~~E~y-P~~~~w~ 224 (596)
-++.++|+||++... ...+++||+. +.+-....... .+. + .+.-++|+ +|+........+..+ +..+ |.
T Consensus 136 la~d~~g~lyv~d~~---~~~I~~id~~-~g~~~~~~~~~--~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~-~~ 206 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRD---DPRVRLISVD-DNKVTTVHPGF--KGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASG-WA 206 (409)
T ss_dssp EEECSTTEEEEEETT---TTEEEEEETT-TTEEEEEEETC--CBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGT-TC
T ss_pred EEEeCCCCEEEEecC---CCcEEEEECC-CCEEEEeeccC--CCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCC-ce
Confidence 344578999998753 3679999997 65544432211 111 1 45555765 555543222244444 4322 21
Q ss_pred CCcccc-cCcccccccCCCcCCcceeeeccCccceE-EEcC-CCcEEEEecc-eeEEecCCCCeE
Q 035640 225 KSPVFF-PLLKDTTNDLKGIDGQEMFLIENNLYPFV-YLSP-DGNLFIFSNN-RSILLDPKANKV 285 (596)
Q Consensus 225 ~~~~~~-p~l~~t~~~~~g~~~~~~~~~~~~~yp~~-~~~~-dG~Ifv~Gg~-~~e~yDp~t~~w 285 (596)
. ... ..... ...+|+. .+.+ +|+||+.-.. ...+||+.+...
T Consensus 207 ~--~~~g~~~~~-----------------~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 207 P--TRIGQLGST-----------------FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV 252 (409)
T ss_dssp E--EEEEECCTT-----------------SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE
T ss_pred e--EEeeeccch-----------------hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE
Confidence 0 011 00000 0012333 3446 7899995433 467899987764
No 153
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=91.14 E-value=13 Score=36.90 Aligned_cols=245 Identities=13% Similarity=0.141 Sum_probs=118.6
Q ss_pred CeecCCCcEEEEcCCCCC---------------------CCeEEEEeCCCCCceeecCc--CCCCcccccEEEEccCCcE
Q 035640 147 GGLTADGDLVSTGGFGGG---------------------ANTVRYLSTCDGCDWREYPT--ALADPRWYSTQVTLPDGGF 203 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g---------------------~~~v~~fdP~~t~~W~~~~~--~M~~~R~y~s~~~L~dG~V 203 (596)
.++.++|++||++..... ...+.++|+. +.+...... .+..+ .+.+.-++|++
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~p---~gia~d~~g~l 104 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN-NAEILQSSGKNLFYLP---HGLSIDTDGNY 104 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT-TCCEEEEECTTTCSSE---EEEEECTTSCE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC-CCeEEeccCCCccCCc---eEEEECCCCCE
Confidence 445678899888654310 1368999987 565432211 12222 24556678999
Q ss_pred EEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEc-C-CCcEEEEec---ceeEE
Q 035640 204 IVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLS-P-DGNLFIFSN---NRSIL 277 (596)
Q Consensus 204 yViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~-~-dG~Ifv~Gg---~~~e~ 277 (596)
||....+ ..+..| +.... . ....+- .. ...|. .. ..-.+|...++ + +|+||+..+ ....+
T Consensus 105 ~v~d~~~-~~v~~~~~~g~~-~---~~~~~~-~~--~~~g~-~~-----~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 105 WVTDVAL-HQVFKLDPHSKE-G---PLLILG-RS--MQPGS-DQ-----NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ 170 (329)
T ss_dssp EEEETTT-TEEEEECTTCSS-C---CSEEES-BT--TBCCC-ST-----TCCSSEEEEEECTTTCCEEEEECSSCCEEEE
T ss_pred EEEECCC-CEEEEEeCCCCe-E---EEEEec-cc--CCCCC-Cc-----cccCCCcEEEEeCCCCeEEEEeCCCCCeEEE
Confidence 9886543 345566 43220 0 000000 00 00000 00 01125665554 5 899999974 35678
Q ss_pred ecCCCCeEEEeeccccC------CCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCce
Q 035640 278 LDPKANKVVREFPILTG------GSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDC 351 (596)
Q Consensus 278 yDp~t~~w~~~lp~mp~------~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~ 351 (596)
||+.... ...+..-.. ....+|. +.++ ....++||++...+ ..+
T Consensus 171 ~~~~g~~-~~~~~~~g~~~~~~~~~~~~p~-gia~-----------d~~~g~l~v~d~~~-----------------~~I 220 (329)
T 3fvz_A 171 FSPSGKF-VTQWGEESSGSSPRPGQFSVPH-SLAL-----------VPHLDQLCVADREN-----------------GRI 220 (329)
T ss_dssp ECTTSCE-EEEECEECCSSSCCTTEESCEE-EEEE-----------ETTTTEEEEEETTT-----------------TEE
T ss_pred EcCCCCE-EEEeccCCCCCCCCCcccCCCc-EEEE-----------ECCCCEEEEEECCC-----------------CEE
Confidence 9965543 333421110 0011121 2222 11248999986532 345
Q ss_pred EEEEeeCCCCceEee-cCC--CCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEE-ecCC
Q 035640 352 GRIDITKPNAVWKKE-RMP--SPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKE-LAAG 427 (596)
Q Consensus 352 ~~id~~~~~~~W~~~-~M~--~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~-~a~~ 427 (596)
.+||+. +.+.... ..+ ..+..+ ...-| |.+|+..|... .. .....++.+||+.+. +... +...
T Consensus 221 ~~~~~~--~G~~~~~~~~~~~~~~~~~-~~~~p-g~~~~~~g~~~-v~-----~~~~~~v~~~~~~~g---~~~~~~~~~ 287 (329)
T 3fvz_A 221 QCFKTD--TKEFVREIKHASFGRNVFA-ISYIP-GFLFAVNGKPY-FG-----DQEPVQGFVMNFSSG---EIIDVFKPV 287 (329)
T ss_dssp EEEETT--TCCEEEEECCTTTTTCEEE-EEEET-TEEEEEECCCC-TT-----CSCCCCEEEEETTTC---CEEEEECCS
T ss_pred EEEECC--CCcEEEEEeccccCCCcce-eeecC-CEEEEeCCCEE-ec-----cCCCcEEEEEEcCCC---eEEEEEcCC
Confidence 667764 3444332 221 122222 23344 78888777531 11 111236789998877 5443 3221
Q ss_pred CcccccceEEEEcCCCcEEEecCCC
Q 035640 428 TIPRMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 428 ~~~R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
...-.+.....+-+||+|||+....
T Consensus 288 ~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 288 RKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp SSCCSSEEEEEECTTSEEEEEESSS
T ss_pred CCccCCeeEEEECCCCCEEEEECCC
Confidence 1111122233457999999997653
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.07 E-value=3.6 Score=40.39 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=70.8
Q ss_pred EEEEeCCCCCEEeCcCCCcc-ccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC-----cccccEE
Q 035640 123 SVLFDFETSELTALKLQTDT-WCSSGGLTADGD-LVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD-----PRWYSTQ 195 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~-fc~~~~~l~dG~-ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~-----~R~y~s~ 195 (596)
..+||+.+++....-..... ......+.+||+ +++.+.. ...+.+||+. +.+....-. +.. ...-...
T Consensus 23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~-t~~~~~~~~-~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLD-TCKNTFHAN-LSSVPGEVGRSMYSF 97 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETT-TTEEEEEEE-SCCSTTEEEECSSCE
T ss_pred EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCC-CCcEEEEEE-cccccccccccccce
Confidence 67888888765432211111 122334567886 5666532 2578999987 665432211 221 1112245
Q ss_pred EEccCCcEEEEcCCC-----------CCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccce-EEEc
Q 035640 196 VTLPDGGFIVVGGRG-----------AFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF-VYLS 262 (596)
Q Consensus 196 ~~L~dG~VyViGG~~-----------~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~~~ 262 (596)
+.-+||+.+++++.+ ...+.+| ..+++- ...+. + +..+. .+. ....
T Consensus 98 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~~~~-~------------~~~~~--~~~~~~~s 156 (349)
T 1jmx_B 98 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE------AKPVR-T------------FPMPR--QVYLMRAA 156 (349)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG------BCCSE-E------------EECCS--SCCCEEEC
T ss_pred EECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc------cceee-e------------ccCCC--cccceeEC
Confidence 566789776666632 2345555 332110 00000 0 00000 122 2246
Q ss_pred CCCcEEEEecceeEEecCCCCeEEEee
Q 035640 263 PDGNLFIFSNNRSILLDPKANKVVREF 289 (596)
Q Consensus 263 ~dG~Ifv~Gg~~~e~yDp~t~~w~~~l 289 (596)
+||++|+. +.+..+||..+.+....+
T Consensus 157 ~dg~l~~~-~~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 157 DDGSLYVA-GPDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp TTSCEEEE-SSSEEEECTTTCCEEEEE
T ss_pred CCCcEEEc-cCcEEEEeCCCCceeccc
Confidence 89997774 556888999888765444
No 155
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=90.95 E-value=20 Score=39.74 Aligned_cols=117 Identities=11% Similarity=0.007 Sum_probs=67.1
Q ss_pred eeeeccCCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCEEeCcCCCccccccCeecCCCc
Q 035640 75 HAILLPKINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSELTALKLQTDTWCSSGGLTADGD 154 (596)
Q Consensus 75 ~~~ll~~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ 154 (596)
....- +|||.+++.....|.. .....++|..+++...............+..+||+
T Consensus 125 ~~~~S-PDG~~la~~~~~~G~~-----------------------~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~ 180 (695)
T 2bkl_A 125 TWAVS-WDGKKVAFAQKPNAAD-----------------------EAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSK 180 (695)
T ss_dssp EEEEC-TTSSEEEEEEEETTCS-----------------------CCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSS
T ss_pred EEEEC-CCCCEEEEEECCCCCc-----------------------eEEEEEEECCCCCCcCCcccCcccccceEEecCCC
Confidence 34555 8999888887542210 13578899999887511111122114566788999
Q ss_pred EEEEcCCCCC----------CCeEEEEeCCCCCcee--ecCcCCC-CcccccEEEEccCCcEEEEcCCCC-CcEEEe
Q 035640 155 LVSTGGFGGG----------ANTVRYLSTCDGCDWR--EYPTALA-DPRWYSTQVTLPDGGFIVVGGRGA-FSYEYI 217 (596)
Q Consensus 155 ilv~GG~~~g----------~~~v~~fdP~~t~~W~--~~~~~M~-~~R~y~s~~~L~dG~VyViGG~~~-~~~E~y 217 (596)
.++.+..... ...+++++.. +..-. .+-. .. ...+..+...-+||+.+++..... ...++|
T Consensus 181 ~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 181 GFYYEWLPTDPSIKVDERPGYTTIRYHTLG-TEPSKDTVVHE-RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVY 255 (695)
T ss_dssp EEEEEECCCCTTSCGGGGGGGCEEEEEETT-SCGGGCEEEEC-CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEE
T ss_pred EEEEEEecCCCCCccccCCCCCEEEEEECC-CCchhceEEEe-cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEE
Confidence 8887755321 3458888876 44321 1111 11 224555667778998777765443 445665
No 156
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.37 E-value=16 Score=36.57 Aligned_cols=87 Identities=14% Similarity=0.167 Sum_probs=51.9
Q ss_pred EEEEeCCCCCEEeCcCCC--ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccC
Q 035640 123 SVLFDFETSELTALKLQT--DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~--~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~d 200 (596)
..+||..++....+.... +.......+.++++.+++|+.+ ..+++||.. ...-..+. .....-.+++..++
T Consensus 143 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~-~~~~~~~~---~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 143 TTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLD-GHEIFKEK---LHKAKVTHAEFNPR 215 (383)
T ss_dssp EEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETT-SCEEEEEE---CSSSCEEEEEECSS
T ss_pred EEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECC-CCEEEEec---cCCCcEEEEEECCC
Confidence 678888876665554322 1222234556799999998864 578999975 33322221 11222334556678
Q ss_pred Cc-EEEEcCCCCCcEEEe
Q 035640 201 GG-FIVVGGRGAFSYEYI 217 (596)
Q Consensus 201 G~-VyViGG~~~~~~E~y 217 (596)
++ +++.|+.++ .+.+|
T Consensus 216 ~~~~l~s~~~d~-~i~iw 232 (383)
T 3ei3_B 216 CDWLMATSSVDA-TVKLW 232 (383)
T ss_dssp CTTEEEEEETTS-EEEEE
T ss_pred CCCEEEEEeCCC-EEEEE
Confidence 88 888887653 46666
No 157
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.12 E-value=14 Score=35.73 Aligned_cols=64 Identities=16% Similarity=0.146 Sum_probs=37.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
..+.+||+.+++|+.+ ..+++++.. ........ .............++++.++.|+.++. +.+|
T Consensus 92 ~~~s~dg~~l~s~~~d---~~i~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~l~s~s~d~~-~~~~ 155 (340)
T 4aow_A 92 VVISSDGQFALSGSWD---GTLRLWDLT-TGTTTRRF--VGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLW 155 (340)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT-TTEEEEEE--ECCSSCEEEEEECTTSSCEEEEETTSC-EEEE
T ss_pred EEECCCCCEEEEEccc---ccceEEeec-ccceeeee--cCCCCceeEEEEeecCccceeecCCCe-EEEE
Confidence 3456799999999865 467888876 44332221 112222334445567888888876543 3444
No 158
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=89.90 E-value=16 Score=36.12 Aligned_cols=50 Identities=12% Similarity=0.120 Sum_probs=30.6
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTC 174 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~ 174 (596)
...+||..+++....-..+........+.+||+.+++||.+ ..+++||..
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~ 148 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL 148 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc
Confidence 36788888776432211121111223456799999998864 568899875
No 159
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=89.73 E-value=5 Score=39.40 Aligned_cols=105 Identities=10% Similarity=0.104 Sum_probs=55.4
Q ss_pred CcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCC-CcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccc
Q 035640 153 GDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALA-DPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFF 230 (596)
Q Consensus 153 G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~ 230 (596)
|+++++|+.+ ..+++||.. +........ +. ....-.+++..+||+.++.|+.++ .+.+| ..+.+ ..
T Consensus 54 g~~l~~~~~d---g~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~~------~~ 121 (368)
T 3mmy_A 54 GNFLIAGSWA---NDVRCWEVQ-DSGQTIPKA-QQMHTGPVLDVCWSDDGSKVFTASCDK-TAKMWDLSSNQ------AI 121 (368)
T ss_dssp SEEEEEEETT---SEEEEEEEC-TTSCEEEEE-EEECSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTTE------EE
T ss_pred ceEEEEECCC---CcEEEEEcC-CCCceeEEE-eccccCCEEEEEECcCCCEEEEEcCCC-cEEEEEcCCCC------ce
Confidence 6899998864 468899976 422221111 21 111222445566899888887653 46666 33321 01
Q ss_pred cCcccccccCCCcCCcceeeeccCccceEEE-cCCCcEEEEecc--eeEEecCCCCeE
Q 035640 231 PLLKDTTNDLKGIDGQEMFLIENNLYPFVYL-SPDGNLFIFSNN--RSILLDPKANKV 285 (596)
Q Consensus 231 p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~-~~dG~Ifv~Gg~--~~e~yDp~t~~w 285 (596)
... .. ........+. .++|++++.|+. ...+||..+++.
T Consensus 122 ~~~-~~---------------~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 122 QIA-QH---------------DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp EEE-EC---------------SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred eec-cc---------------cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 000 00 0000111111 578888888875 467788877653
No 160
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.70 E-value=13 Score=36.82 Aligned_cols=87 Identities=14% Similarity=0.057 Sum_probs=53.7
Q ss_pred EEEEeCCCCCEEeCc-CCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCC--cccccEEEEcc
Q 035640 123 SVLFDFETSELTALK-LQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALAD--PRWYSTQVTLP 199 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~-~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~--~R~y~s~~~L~ 199 (596)
..+||..+.+..... ......+....+.+||.++++|+.+ ..+++||.. +.+-.. ..+.. ...-.+++.-+
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d---g~i~iwd~~-~~~~~~--~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD---GILDVYNLS-SPDQAS--SRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT---SCEEEEESS-CTTSCC--EECCCCTTSCEEEEEECT
T ss_pred EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC-CCCCCc--cEEeccCCCCEEEEEEeC
Confidence 678898887764432 2222223344567899999999864 469999987 544220 01222 22223444567
Q ss_pred CCcEEEEcCCCCCcEEEe
Q 035640 200 DGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 200 dG~VyViGG~~~~~~E~y 217 (596)
||+.++.|+. + .+.+|
T Consensus 225 ~g~~l~s~~~-~-~v~iw 240 (343)
T 3lrv_A 225 NGYWMVVECD-Q-TVVCF 240 (343)
T ss_dssp TSSEEEEEES-S-BEEEE
T ss_pred CCCEEEEEeC-C-eEEEE
Confidence 8999998883 3 77777
No 161
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=89.64 E-value=15 Score=35.23 Aligned_cols=60 Identities=17% Similarity=0.252 Sum_probs=35.3
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCC-------ceeecCcCCCCcc-cccEEEEccC--CcEEEEcCCCCCcEEEe
Q 035640 152 DGDLVSTGGFGGGANTVRYLSTCDGC-------DWREYPTALADPR-WYSTQVTLPD--GGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 152 dG~ilv~GG~~~g~~~v~~fdP~~t~-------~W~~~~~~M~~~R-~y~s~~~L~d--G~VyViGG~~~~~~E~y 217 (596)
|++++++|+.+ ..+++||.. +. .|..... +.... .-.+++..++ ++.++.|+.++ .+.+|
T Consensus 70 d~~~l~s~~~d---g~v~vwd~~-~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-~v~iw 139 (351)
T 3f3f_A 70 YGRIIASASYD---KTVKLWEED-PDQEECSGRRWNKLCT-LNDSKGSLYSVKFAPAHLGLKLACLGNDG-ILRLY 139 (351)
T ss_dssp GCSEEEEEETT---SCEEEEEEC-TTSCTTSSCSEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTC-EEEEE
T ss_pred CCCEEEEEcCC---CeEEEEecC-CCcccccccCcceeee-ecccCCceeEEEEcCCCCCcEEEEecCCC-cEEEe
Confidence 58999998864 458888875 32 2222221 22222 1224445566 88888888654 45566
No 162
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=89.31 E-value=18 Score=35.60 Aligned_cols=62 Identities=16% Similarity=0.174 Sum_probs=38.9
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEEccCCcEEEEcCCCCCcEEEe
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
.+.+||+.+++|+.+ ..+++||.. +.+-... +... ..-.++..-++++.++.|+.++ ++.+|
T Consensus 72 ~~s~dg~~l~s~s~D---~~v~~wd~~-~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~vw 134 (319)
T 3frx_A 72 TLTADGAYALSASWD---KTLRLWDVA-TGETYQR---FVGHKSDVMSVDIDKKASMIISGSRDK-TIKVW 134 (319)
T ss_dssp EECTTSSEEEEEETT---SEEEEEETT-TTEEEEE---EECCSSCEEEEEECTTSCEEEEEETTS-CEEEE
T ss_pred EECCCCCEEEEEeCC---CEEEEEECC-CCCeeEE---EccCCCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 456799999999865 679999987 5542211 2111 1122344556888888888764 45566
No 163
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=88.98 E-value=6.1 Score=38.30 Aligned_cols=135 Identities=13% Similarity=0.030 Sum_probs=73.1
Q ss_pred EEEEeCCCCCEEeCcCC--C--ccccccCeecCCCcEEEE----cCC----------CCCCCeEEEEeCCCCCceeecCc
Q 035640 123 SVLFDFETSELTALKLQ--T--DTWCSSGGLTADGDLVST----GGF----------GGGANTVRYLSTCDGCDWREYPT 184 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~--~--~~fc~~~~~l~dG~ilv~----GG~----------~~g~~~v~~fdP~~t~~W~~~~~ 184 (596)
...||+.+++++.+... . ..+....++.++|++|++ |.. ..+...+..||+. .+......
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~ 169 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLSAPIR 169 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEEEEEC
T ss_pred EEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEEEeec
Confidence 67889888887765321 1 112234556789999997 431 1113478889985 33333222
Q ss_pred CCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CC-CCCC-CCCcccccCcccccccCCCcCCcceeeeccCccce-EE
Q 035640 185 ALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PP-EGQS-NKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF-VY 260 (596)
Q Consensus 185 ~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~-~~~w-~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~-~~ 260 (596)
.+..+ .+.+.-+||+++ +.......+..| .. .++. . ....+ .. ..-+|. ..
T Consensus 170 ~~~~~---~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~----~~~~~-~~----------------~~~~p~~i~ 224 (296)
T 3e5z_A 170 DRVKP---NGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEY----QGVHF-TV----------------EPGKTDGLR 224 (296)
T ss_dssp CCSSE---EEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEE----EEEEE-CC----------------SSSCCCSEE
T ss_pred CCCCC---ccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcC----CCeEe-eC----------------CCCCCCeEE
Confidence 12222 245556789988 544444456666 33 2211 0 00000 00 011233 33
Q ss_pred EcCCCcEEEEecceeEEecCCCCe
Q 035640 261 LSPDGNLFIFSNNRSILLDPKANK 284 (596)
Q Consensus 261 ~~~dG~Ifv~Gg~~~e~yDp~t~~ 284 (596)
.-++|+||+..+....+||+....
T Consensus 225 ~d~~G~l~v~~~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 225 VDAGGLIWASAGDGVHVLTPDGDE 248 (296)
T ss_dssp EBTTSCEEEEETTEEEEECTTSCE
T ss_pred ECCCCCEEEEcCCeEEEECCCCCE
Confidence 457999999987778899998544
No 164
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=88.89 E-value=18 Score=35.12 Aligned_cols=62 Identities=8% Similarity=-0.061 Sum_probs=36.9
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCc----eeecCcCCCCcccccEEEEccCCc-EEEEcCCCCCcEEEe
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCD----WREYPTALADPRWYSTQVTLPDGG-FIVVGGRGAFSYEYI 217 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~----W~~~~~~M~~~R~y~s~~~L~dG~-VyViGG~~~~~~E~y 217 (596)
.+.++|+++++|+.+ ..+++||.. +.+ .... ......-.+++..++|+ .+++|+.++ .+.+|
T Consensus 18 ~~s~~~~~l~~~~~d---~~v~iw~~~-~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~~w 84 (342)
T 1yfq_A 18 KIIPSKSLLLITSWD---GSLTVYKFD-IQAKNVDLLQS---LRYKHPLLCCNFIDNTDLQIYVGTVQG-EILKV 84 (342)
T ss_dssp EEEGGGTEEEEEETT---SEEEEEEEE-TTTTEEEEEEE---EECSSCEEEEEEEESSSEEEEEEETTS-CEEEE
T ss_pred EEcCCCCEEEEEcCC---CeEEEEEeC-CCCccccceee---eecCCceEEEEECCCCCcEEEEEcCCC-eEEEE
Confidence 345678888888754 568888875 443 2111 11222233455566899 888888654 45666
No 165
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=88.59 E-value=17 Score=37.59 Aligned_cols=136 Identities=10% Similarity=0.064 Sum_probs=75.0
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDG 201 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG 201 (596)
...+||..+++.+.+..... ......+.+||+.+++.+..++...++++|.. +.+...+.. ......+.+--+||
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~~~l~~---~~~~~~~~~~spdg 278 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQIRQVTD---GRSNNTEPTWFPDS 278 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEEECCC---CSSCEEEEEECTTS
T ss_pred EEEEEECCCCcEEEeecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECC-CCCEEeCcC---CCCcccceEECCCC
Confidence 46789999988876643322 22334567899866644433455679999987 666554432 11222334455799
Q ss_pred cEEEEcCCCCC--cEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccc-eEEEcCCCcEEEEecc----
Q 035640 202 GFIVVGGRGAF--SYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYP-FVYLSPDGNLFIFSNN---- 273 (596)
Q Consensus 202 ~VyViGG~~~~--~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp-~~~~~~dG~Ifv~Gg~---- 273 (596)
+.++++..... .+..+ ...++- ..+.. . ..+. .....+||+.++++..
T Consensus 279 ~~l~~~s~~~g~~~i~~~d~~~~~~----~~l~~--~------------------~~~~~~~~~spdG~~l~~~~~~~g~ 334 (415)
T 2hqs_A 279 QNLAFTSDQAGRPQVYKVNINGGAP----QRITW--E------------------GSQNQDADVSSDGKFMVMVSSNGGQ 334 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTSSCC----EECCC--S------------------SSEEEEEEECTTSSEEEEEEECSSC
T ss_pred CEEEEEECCCCCcEEEEEECCCCCE----EEEec--C------------------CCcccCeEECCCCCEEEEEECcCCc
Confidence 86666554322 33333 332210 00000 0 0011 2334689987766553
Q ss_pred -eeEEecCCCCeEE
Q 035640 274 -RSILLDPKANKVV 286 (596)
Q Consensus 274 -~~e~yDp~t~~w~ 286 (596)
...++|..+++..
T Consensus 335 ~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 335 QHIAKQDLATGGVQ 348 (415)
T ss_dssp EEEEEEETTTCCEE
T ss_pred eEEEEEECCCCCEE
Confidence 4677899888764
No 166
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=88.36 E-value=17 Score=34.39 Aligned_cols=218 Identities=13% Similarity=0.143 Sum_probs=107.1
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCc-ccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADP-RWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNK 225 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~-R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~ 225 (596)
....+|+|++.... ...+.+||+. .+..... +... ..-.+.+.-++|++|+..... ..+..| +. ++..
T Consensus 26 ~~d~~g~l~v~~~~---~~~v~~~~~~--~~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~-~~v~~~d~~-g~~~- 95 (300)
T 2qc5_A 26 TSSEDGKVWFTQHK---ANKISSLDQS--GRIKEFE--VPTPDAKVMCLIVSSLGDIWFTENGA-NKIGKLSKK-GGFT- 95 (300)
T ss_dssp EECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECTT-SCEE-
T ss_pred eECCCCCEEEEcCC---CCeEEEECCC--CceEEEE--CCCCCCcceeEEECCCCCEEEEecCC-CeEEEECCC-CCeE-
Confidence 44568999997642 2568899985 4444331 2111 122344555689999875432 334455 44 3221
Q ss_pred CcccccCcccccccCCCcCCcceeeeccCccceEEE-cCCCcEEEEec--ceeEEecCCCCeEEEeeccccCCCCCCCCC
Q 035640 226 SPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYL-SPDGNLFIFSN--NRSILLDPKANKVVREFPILTGGSRNYPAS 302 (596)
Q Consensus 226 ~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~-~~dG~Ifv~Gg--~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~ 302 (596)
..... . ....|...+ .++|+||+... ....+||+. ++.. .+. ++. .-..|
T Consensus 96 ---~~~~~-~-----------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~-~~~-~~~~~-- 148 (300)
T 2qc5_A 96 ---EYPLP-Q-----------------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYD-LPN-KGSYP-- 148 (300)
T ss_dssp ---EEECS-S-----------------TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEE-CSS-TTCCE--
T ss_pred ---EecCC-C-----------------CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-Ecc-CCC-CCCCc--
Confidence 11100 0 011344433 46899999863 457789988 5543 221 221 11111
Q ss_pred ceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEeecCCCCcccc-ceEEeC
Q 035640 303 AMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMG-DMVILP 381 (596)
Q Consensus 303 g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~-~avvLp 381 (596)
..+.+ ..+++||+..-.. ..+.++|+ +.+.....++..-... +.++-+
T Consensus 149 -~~i~~----------d~~g~l~v~~~~~-----------------~~i~~~~~---~g~~~~~~~~~~~~~~~~i~~d~ 197 (300)
T 2qc5_A 149 -AFITL----------GSDNALWFTENQN-----------------NSIGRITN---TGKLEEYPLPTNAAAPVGITSGN 197 (300)
T ss_dssp -EEEEE----------CTTSSEEEEETTT-----------------TEEEEECT---TCCEEEEECSSTTCCEEEEEECT
T ss_pred -eeEEE----------CCCCCEEEEecCC-----------------CeEEEECC---CCcEEEeeCCCCCCCcceEEECC
Confidence 12211 1357788764311 23445554 2333332222111112 233457
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 382 TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 382 dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
+|+||+..-.. ..+.+||+ +. ++...... ..-.......+-++|+||++...
T Consensus 198 ~g~l~v~~~~~-------------~~i~~~~~-~g---~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 198 DGALWFVEIMG-------------NKIGRITT-TG---EISEYDIP-TPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp TSSEEEEETTT-------------TEEEEECT-TC---CEEEEECS-STTCCEEEEEECSTTCEEEEETT
T ss_pred CCCEEEEccCC-------------CEEEEEcC-CC---cEEEEECC-CCCCCceEEEECCCCCEEEeccC
Confidence 89999875321 14678998 44 55543211 11111223345689999998743
No 167
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=88.21 E-value=21 Score=35.24 Aligned_cols=178 Identities=10% Similarity=-0.026 Sum_probs=95.8
Q ss_pred ccCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEec--ce
Q 035640 198 LPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSN--NR 274 (596)
Q Consensus 198 L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg--~~ 274 (596)
+.++++|+..|..+. +..+ +++++-.. .. + +..+|.......+++||+... +.
T Consensus 62 ~~~~~Ly~stG~~g~-v~~iD~~Tgkv~~---~~--l------------------~~~~FgeGit~~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 62 FHQGHFFESTGHQGT-LRQLSLESAQPVW---ME--R------------------LGNIFAEGLASDGERLYQLTWTEGL 117 (268)
T ss_dssp EETTEEEEEETTTTE-EEECCSSCSSCSE---EE--E------------------CTTCCEEEEEECSSCEEEEESSSCE
T ss_pred EECCEEEEEcCCCCE-EEEEECCCCcEEe---EE--C------------------CCCcceeEEEEeCCEEEEEEccCCE
Confidence 447899999997654 6666 66553210 01 1 112344445667889999974 45
Q ss_pred eEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccccccccCCCCceEEE
Q 035640 275 SILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRI 354 (596)
Q Consensus 275 ~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~i 354 (596)
+.+||+++.+....++--+ .|.++. ....++|+.-|. +....+
T Consensus 118 v~V~D~~Tl~~~~ti~~~~--------eGwGLt-----------~Dg~~L~vSdGs------------------~~l~~i 160 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSG--------EGWGLC-----------YWNGKLVRSDGG------------------TMLTFH 160 (268)
T ss_dssp EEEEETTTTEEEEEEECSS--------CCCCEE-----------EETTEEEEECSS------------------SEEEEE
T ss_pred EEEEECCcCcEEEEEeCCC--------ceeEEe-----------cCCCEEEEECCC------------------CEEEEE
Confidence 7899999988766554311 222221 135677777652 234455
Q ss_pred EeeCCCCceEe-e---cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCC--
Q 035640 355 DITKPNAVWKK-E---RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGT-- 428 (596)
Q Consensus 355 d~~~~~~~W~~-~---~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~-- 428 (596)
|+. +.+-.. . ..+.+-...+.+...||+||+.- .. + ..+.+-||++.+-..|-.++.+.
T Consensus 161 Dp~--T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv-w~---------s---~~I~vIDp~TG~V~~~Idl~~L~~~ 225 (268)
T 3nok_A 161 EPD--GFALVGAVQVKLRGQPVELINELECANGVIYANI-WH---------S---SDVLEIDPATGTVVGVIDASALTRA 225 (268)
T ss_dssp CTT--TCCEEEEEECEETTEECCCEEEEEEETTEEEEEE-TT---------C---SEEEEECTTTCBEEEEEECHHHHHH
T ss_pred cCC--CCeEEEEEEeCCCCcccccccccEEeCCEEEEEE-CC---------C---CeEEEEeCCCCcEEEEEECCCCccc
Confidence 554 322111 1 21222122233445599999643 11 1 15778899998544455544321
Q ss_pred -------cccccceEEEEcCCCcEEEecCC
Q 035640 429 -------IPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 429 -------~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
..-.--+.|.--...|+||+|-.
T Consensus 226 ~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 226 VAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp HTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred ccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 00122344543335889998864
No 168
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=87.38 E-value=19 Score=35.45 Aligned_cols=108 Identities=9% Similarity=-0.001 Sum_probs=60.6
Q ss_pred cceEEEc-CCCcEEEEec----ceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCc
Q 035640 256 YPFVYLS-PDGNLFIFSN----NRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGA 330 (596)
Q Consensus 256 yp~~~~~-~dG~Ifv~Gg----~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~ 330 (596)
||+.... +||+||+..| .....+|+.+++..+.++ ++ .+.+ ..|.+. .+++||+..-.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~--~~~f-geGi~~-------------~g~~lyv~t~~ 84 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-MD--DSYF-GEGLTL-------------LNEKLYQVVWL 84 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CC--TTCC-EEEEEE-------------ETTEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cC--CCcc-eEEEEE-------------eCCEEEEEEec
Confidence 4444444 5699999865 467889999999775543 22 2221 112222 36788887532
Q ss_pred cCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCC-eEEEEcCCCCCCCCCCCCCCCCccc
Q 035640 331 QWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTE-DILLLNGAKTGTSGWNDAEDPNLVP 408 (596)
Q Consensus 331 ~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG-~V~vvGG~~~g~~g~~~~~~~~~s~ 408 (596)
+ +.+.+||+. +.+=... +...+. +- .+.+|| ++|+..|.+ ++
T Consensus 85 ~-----------------~~v~viD~~--t~~v~~~i~~g~~~--g~-glt~Dg~~l~vs~gs~--------------~l 128 (266)
T 2iwa_A 85 K-----------------NIGFIYDRR--TLSNIKNFTHQMKD--GW-GLATDGKILYGSDGTS--------------IL 128 (266)
T ss_dssp C-----------------SEEEEEETT--TTEEEEEEECCSSS--CC-EEEECSSSEEEECSSS--------------EE
T ss_pred C-----------------CEEEEEECC--CCcEEEEEECCCCC--eE-EEEECCCEEEEECCCC--------------eE
Confidence 2 456678864 3222222 333121 22 234565 577776521 56
Q ss_pred EEEcCCCC
Q 035640 409 ALYTPRGP 416 (596)
Q Consensus 409 e~YDP~t~ 416 (596)
...||++.
T Consensus 129 ~viD~~t~ 136 (266)
T 2iwa_A 129 YEIDPHTF 136 (266)
T ss_dssp EEECTTTC
T ss_pred EEEECCCC
Confidence 78999887
No 169
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=86.25 E-value=29 Score=34.68 Aligned_cols=59 Identities=12% Similarity=0.092 Sum_probs=36.6
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcc-cEEEcCCCCCCCce-EEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLV-PALYTPRGPSRQRF-KELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s-~e~YDP~t~~g~~W-t~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
..-|||++++.|+.+. + +.+||..+. +- ..+..-... ..-.....-|||+.+++|+...
T Consensus 202 ~~s~~g~~l~s~s~d~-------------~~v~iwd~~~~---~~~~~~~~g~h~-~~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 202 RLNRKSDMVATCSQDG-------------TIIRVFKTEDG---VLVREFRRGLDR-ADVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp EECTTSSEEEEEETTC-------------SEEEEEETTTC---CEEEEEECTTCC-SCEEEEEECTTSCEEEEEETTC
T ss_pred EECCCCCEEEEEeCCC-------------CEEEEEECCCC---cEEEEEEcCCCC-CcEEEEEECCCCCEEEEEECCC
Confidence 4568999999988651 5 789998876 32 222210011 1112344579999999998753
No 170
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=85.70 E-value=23 Score=39.19 Aligned_cols=116 Identities=12% Similarity=-0.002 Sum_probs=60.4
Q ss_pred eecCCCcEEEEcCCCCC---CCeEEEEeCCCCCceeecCc--CCC-------------Ccc-------cccEEEEccCCc
Q 035640 148 GLTADGDLVSTGGFGGG---ANTVRYLSTCDGCDWREYPT--ALA-------------DPR-------WYSTQVTLPDGG 202 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g---~~~v~~fdP~~t~~W~~~~~--~M~-------------~~R-------~y~s~~~L~dG~ 202 (596)
...+||+.+++++..++ ...++++|.. +.+...+.. ... ..| ...+.+.-+||+
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIG-SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETT-TCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECC-CCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 45679998888765222 3478999987 666544321 011 001 123445567998
Q ss_pred EEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEe-cceeEEecC
Q 035640 203 FIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFS-NNRSILLDP 280 (596)
Q Consensus 203 VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~G-g~~~e~yDp 280 (596)
.++++.. ..+.+| ...+.- + ....+. ... .. --.....|||+.++++ .....++|.
T Consensus 122 ~l~~~~~--~~i~~~d~~~~~~-~--~~~~l~-~~~---------------~~-~~~~~~SPDG~~la~~~~~~i~~~d~ 179 (741)
T 2ecf_A 122 RLLFPLG--GELYLYDLKQEGK-A--AVRQLT-HGE---------------GF-ATDAKLSPKGGFVSFIRGRNLWVIDL 179 (741)
T ss_dssp EEEEEET--TEEEEEESSSCST-T--SCCBCC-CSS---------------SC-EEEEEECTTSSEEEEEETTEEEEEET
T ss_pred EEEEEeC--CcEEEEECCCCCc-c--eEEEcc-cCC---------------cc-cccccCCCCCCEEEEEeCCcEEEEec
Confidence 7777654 455566 332200 0 000110 000 00 0123346899865554 456788999
Q ss_pred CCCeEE
Q 035640 281 KANKVV 286 (596)
Q Consensus 281 ~t~~w~ 286 (596)
.+++..
T Consensus 180 ~~g~~~ 185 (741)
T 2ecf_A 180 ASGRQM 185 (741)
T ss_dssp TTTEEE
T ss_pred CCCCEE
Confidence 887764
No 171
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=85.65 E-value=47 Score=36.56 Aligned_cols=110 Identities=10% Similarity=-0.053 Sum_probs=63.2
Q ss_pred eeeeeccCCCEEEEEeee-ccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCEEeCcCCCc-----------
Q 035640 74 MHAILLPKINKVLMYDAT-VWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSELTALKLQTD----------- 141 (596)
Q Consensus 74 ~~~~ll~~~gkV~~~g~~-~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~----------- 141 (596)
.+.++- +||+.+++... +.+. ......+||..+++.+.+.....
T Consensus 40 ~~~~~S-pdG~~la~~~~~d~~~-----------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 95 (741)
T 2ecf_A 40 MKPKVA-PDGSRVTFLRGKDSDR-----------------------NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDE 95 (741)
T ss_dssp EEEEEC-TTSSEEEEEECCSSCT-----------------------TEEEEEEEETTTCCEEEEECGGGTC---------
T ss_pred CCceEe-cCCCEEEEEeccCCCC-----------------------cccEEEEEECCCCceeEccchhhcccccccccch
Confidence 345665 89988777664 3110 01346788888887765542211
Q ss_pred -------------cccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC---ceeecCcCCCCcccccEEEEccCCcEEE
Q 035640 142 -------------TWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGC---DWREYPTALADPRWYSTQVTLPDGGFIV 205 (596)
Q Consensus 142 -------------~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~---~W~~~~~~M~~~R~y~s~~~L~dG~VyV 205 (596)
.......+.+||+.++++.. ..++++|.. +. +-..+.. ....-...+.-+||+.++
T Consensus 96 ~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~-~~~~~~~~~l~~---~~~~~~~~~~SPDG~~la 167 (741)
T 2ecf_A 96 EKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK-QEGKAAVRQLTH---GEGFATDAKLSPKGGFVS 167 (741)
T ss_dssp -----------CCEESCCCEECTTSSEEEEEET----TEEEEEESS-SCSTTSCCBCCC---SSSCEEEEEECTTSSEEE
T ss_pred hhhhhhhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC-CCCcceEEEccc---CCcccccccCCCCCCEEE
Confidence 11234466789998888764 579999987 55 3333321 122233455567998766
Q ss_pred EcCCCCCcEEEe
Q 035640 206 VGGRGAFSYEYI 217 (596)
Q Consensus 206 iGG~~~~~~E~y 217 (596)
.+.. ..+.++
T Consensus 168 ~~~~--~~i~~~ 177 (741)
T 2ecf_A 168 FIRG--RNLWVI 177 (741)
T ss_dssp EEET--TEEEEE
T ss_pred EEeC--CcEEEE
Confidence 6543 244444
No 172
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=85.28 E-value=18 Score=35.74 Aligned_cols=101 Identities=14% Similarity=0.126 Sum_probs=58.1
Q ss_pred cCCCcEEEEecc----eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCcccc
Q 035640 262 SPDGNLFIFSNN----RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYF 337 (596)
Q Consensus 262 ~~dG~Ifv~Gg~----~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 337 (596)
..+|.||+..|. ....+|+++++..+.++ ++ .+.+ ..|.++ .+++||+.-..+
T Consensus 50 ~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~--~~~F-geGit~-------------~g~~ly~ltw~~------ 106 (262)
T 3nol_A 50 YRNGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LG--KRYF-GEGISD-------------WKDKIVGLTWKN------ 106 (262)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CC--TTCC-EEEEEE-------------ETTEEEEEESSS------
T ss_pred EECCEEEEECCCCCCceEEEEECCCCcEEEEEe-cC--Cccc-eeEEEE-------------eCCEEEEEEeeC------
Confidence 348899998875 46789999999776553 33 2221 122232 378999985422
Q ss_pred ccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCe-EEEEcCCCCCCCCCCCCCCCCcccEEEcCCC
Q 035640 338 SETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTED-ILLLNGAKTGTSGWNDAEDPNLVPALYTPRG 415 (596)
Q Consensus 338 ~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~-V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t 415 (596)
+.+.+||+. +-+-... +.+ - .+-++. +||+ +|+..|.+ .+..+||++
T Consensus 107 -----------~~v~v~D~~--t~~~~~ti~~~--~-eG~glt-~dg~~L~~SdGs~--------------~i~~iDp~T 155 (262)
T 3nol_A 107 -----------GLGFVWNIR--NLRQVRSFNYD--G-EGWGLT-HNDQYLIMSDGTP--------------VLRFLDPES 155 (262)
T ss_dssp -----------SEEEEEETT--TCCEEEEEECS--S-CCCCEE-ECSSCEEECCSSS--------------EEEEECTTT
T ss_pred -----------CEEEEEECc--cCcEEEEEECC--C-CceEEe-cCCCEEEEECCCC--------------eEEEEcCCC
Confidence 356677765 3332222 322 1 222244 4554 56555421 567899998
Q ss_pred C
Q 035640 416 P 416 (596)
Q Consensus 416 ~ 416 (596)
.
T Consensus 156 ~ 156 (262)
T 3nol_A 156 L 156 (262)
T ss_dssp C
T ss_pred C
Confidence 7
No 173
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=84.71 E-value=11 Score=37.46 Aligned_cols=100 Identities=10% Similarity=0.001 Sum_probs=56.7
Q ss_pred CCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccc-eEEeCCCeEEEEcCCCCCCCCC
Q 035640 321 KAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGD-MVILPTEDILLLNGAKTGTSGW 398 (596)
Q Consensus 321 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~-avvLpdG~V~vvGG~~~g~~g~ 398 (596)
+++.++.|+.+ .++..+|+......++.. .+........ ...-|+|++++.|+.+.
T Consensus 118 ~g~~las~s~D-----------------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~----- 175 (330)
T 2hes_X 118 DGYYLATCSRD-----------------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD----- 175 (330)
T ss_dssp TSCEEEEEETT-----------------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-----
T ss_pred CCCEEEEEeCC-----------------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-----
Confidence 67788888765 234556664223344443 3322111122 23358999999988651
Q ss_pred CCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCC--CcEEEecCCCC
Q 035640 399 NDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPD--GTVLVAGSNTH 453 (596)
Q Consensus 399 ~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpD--G~Vlv~GG~~~ 453 (596)
++.+||..+. .|..+..+.-....-......|| +..++.|+...
T Consensus 176 --------~i~iW~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 176 --------TVRIWKDYDD---DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp --------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred --------eEEEEECCCC---CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 5689998877 77655444322211123345577 77888887654
No 174
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=84.08 E-value=31 Score=33.09 Aligned_cols=80 Identities=10% Similarity=-0.014 Sum_probs=44.9
Q ss_pred EEEEeCCCCCEEeCcCC----CccccccCeecCC-CcEEEEcCCCCCCCeEEEEeCCCCCceeec-CcCC-CCc-ccccE
Q 035640 123 SVLFDFETSELTALKLQ----TDTWCSSGGLTAD-GDLVSTGGFGGGANTVRYLSTCDGCDWREY-PTAL-ADP-RWYST 194 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~----~~~fc~~~~~l~d-G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~-~~~M-~~~-R~y~s 194 (596)
..+||+.+++++.+... ......+.....+ |++++.... ..+.+||+. .+.... ...- ..+ ..-..
T Consensus 48 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~----~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~ 121 (314)
T 1pjx_A 48 ILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR----LGLLVVQTD--GTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp EEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----TEEEEEETT--SCEEECCSBCTTSCBCBCCCE
T ss_pred EEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC----CCEEEEeCC--CCEEEEEeccCCCccccCCcC
Confidence 67788888888765431 1111122344567 899887642 368889985 344333 2100 111 11234
Q ss_pred EEEccCCcEEEEcC
Q 035640 195 QVTLPDGGFIVVGG 208 (596)
Q Consensus 195 ~~~L~dG~VyViGG 208 (596)
.+.-++|++|+...
T Consensus 122 i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 122 CAFDYEGNLWITAP 135 (314)
T ss_dssp EEECTTSCEEEEEC
T ss_pred EEECCCCCEEEEec
Confidence 55667899998764
No 175
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=83.54 E-value=16 Score=36.81 Aligned_cols=93 Identities=8% Similarity=0.023 Sum_probs=47.5
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCC-cEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCccccc-EEEEcc
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADG-DLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYS-TQVTLP 199 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG-~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~-s~~~L~ 199 (596)
...+||..+++....-..+...-....+.+++ .++++|+.+ ..+++||.. +.+-...-. ........ +++..+
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---~~v~iwd~~-~~~~~~~~~-~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED---NRILLWDTR-CPKPASQIG-CSAPGYLPTSLAWHP 224 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT---SCEEEEETT-SSSCEEECC-----CCCEEEEEECS
T ss_pred eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc---ccccccccc-ccceeeeee-cceeeccceeeeecC
Confidence 36788988876543221122111122344566 588888764 568999987 544322111 11111112 233333
Q ss_pred -CCcEEEEcCCCCCcEEEe-CCC
Q 035640 200 -DGGFIVVGGRGAFSYEYI-PPE 220 (596)
Q Consensus 200 -dG~VyViGG~~~~~~E~y-P~~ 220 (596)
++++++.|+.+ ..+.+| .++
T Consensus 225 ~~~~~l~sg~~d-g~v~~wd~~~ 246 (344)
T 4gqb_B 225 QQSEVFVFGDEN-GTVSLVDTKS 246 (344)
T ss_dssp SCTTEEEEEETT-SEEEEEESCC
T ss_pred CCCcceEEeccC-CcEEEEECCC
Confidence 56788888765 356676 443
No 176
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=81.90 E-value=15 Score=37.82 Aligned_cols=170 Identities=12% Similarity=0.126 Sum_probs=79.3
Q ss_pred CccceEEEcCCCcEEEEec--------ceeEEe--cCCCCeEEEeeccccCCCCCCCC--CceEEeccccccccccccCC
Q 035640 254 NLYPFVYLSPDGNLFIFSN--------NRSILL--DPKANKVVREFPILTGGSRNYPA--SAMSVLLPLKLRANNATATK 321 (596)
Q Consensus 254 ~~yp~~~~~~dG~Ifv~Gg--------~~~e~y--Dp~t~~w~~~lp~mp~~~R~~p~--~g~av~lpl~~~~~~~~~~~ 321 (596)
..||..+.++||.|++..- ....+| +-...+|. .+..+......+.. ......+|-. -....+
T Consensus 23 ~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~-~~~~v~~~~~g~~~~~~P~l~~lp~~----v~~~~~ 97 (355)
T 3a72_A 23 TLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWN-EISRVHDTVNGYGLRYQPFLYSLPER----VGSFKK 97 (355)
T ss_dssp EEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCE-EEEEECCTTTSSCEEEEEEEEECSSC----BTTBCT
T ss_pred CccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcC-CCcccCCCcCCcccccCCcEEecCcc----cccCCC
Confidence 4689999999999998631 112233 23345676 44333211111100 0111112200 001137
Q ss_pred CEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-c-----CCCCcc------ccceEEeCCCeEEEEc
Q 035640 322 AKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-R-----MPSPRV------MGDMVILPTEDILLLN 389 (596)
Q Consensus 322 gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~-----M~~~R~------~~~avvLpdG~V~vvG 389 (596)
|+|+++|-..... .....+..+--.|...+|+.. . ++.++. +. .+.+.+|+|++.-
T Consensus 98 G~ll~~~~~~~~d-----------~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP-~~~~~~G~l~~~~ 165 (355)
T 3a72_A 98 GTLLLAGSSIPTD-----------LSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEP-FLLANKGKLICYY 165 (355)
T ss_dssp TCEEEEEEECCTT-----------CCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEE-EEEEETTEEEEEE
T ss_pred CcEEEEEeeecCC-----------CCCceEEEEEECCCCccCccCccccccCccccccCCCccccc-eEEccCCeEEEEE
Confidence 7888774211000 001122334445567789875 3 222221 22 3567899998875
Q ss_pred CCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCC-----cccccceEEEEcCCCcEEEe
Q 035640 390 GAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGT-----IPRMYHSSSVLLPDGTVLVA 448 (596)
Q Consensus 390 G~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~-----~~R~yhs~a~LlpDG~Vlv~ 448 (596)
....+.. ... +....--.+| |++|+...... ..|.....++-|+||+++++
T Consensus 166 ~~~~~~~-----~~~--~~~~~~~S~D-G~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 166 SDQRDNA-----TYG--QTMVHQVTND-LKNWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp EECCCTT-----TCS--CEEEEEEESS-SSSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCC-----CCC--cEEEEEECCC-CCCCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 3321100 000 1111122244 77997544321 22333446677999998876
No 177
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=81.77 E-value=32 Score=33.40 Aligned_cols=106 Identities=9% Similarity=0.127 Sum_probs=60.6
Q ss_pred EEEcCCCcEEEEecc----eeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCc
Q 035640 259 VYLSPDGNLFIFSNN----RSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDS 334 (596)
Q Consensus 259 ~~~~~dG~Ifv~Gg~----~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~ 334 (596)
.....++.||...|. ....+|+++++..+.+ +++. +.+ ..|.++ .+++||++...+
T Consensus 25 GL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~--~~f-geGi~~-------------~~~~ly~ltw~~--- 84 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETGRSSVRKVDLETGRILQRA-EVPP--PYF-GAGIVA-------------WRDRLIQLTWRN--- 84 (243)
T ss_dssp EEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCT--TCC-EEEEEE-------------ETTEEEEEESSS---
T ss_pred cEEEECCEEEEECCCCCCceEEEEECCCCCEEEEE-eCCC--Ccc-eeEEEE-------------eCCEEEEEEeeC---
Confidence 334457899998876 4678999999976544 3332 221 123232 378999985432
Q ss_pred cccccccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCC
Q 035640 335 FYFSETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPR 414 (596)
Q Consensus 335 ~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~ 414 (596)
+.+.+||+. +-+-.. ..+.+.. +-+++--++++|+..|.. ++..+||+
T Consensus 85 --------------~~v~v~D~~--tl~~~~-ti~~~~~-Gwglt~dg~~L~vSdgs~--------------~l~~iDp~ 132 (243)
T 3mbr_X 85 --------------HEGFVYDLA--TLTPRA-RFRYPGE-GWALTSDDSHLYMSDGTA--------------VIRKLDPD 132 (243)
T ss_dssp --------------SEEEEEETT--TTEEEE-EEECSSC-CCEEEECSSCEEEECSSS--------------EEEEECTT
T ss_pred --------------CEEEEEECC--cCcEEE-EEeCCCC-ceEEeeCCCEEEEECCCC--------------eEEEEeCC
Confidence 356677764 322222 2222222 223443345677776632 56789999
Q ss_pred CC
Q 035640 415 GP 416 (596)
Q Consensus 415 t~ 416 (596)
+.
T Consensus 133 t~ 134 (243)
T 3mbr_X 133 TL 134 (243)
T ss_dssp TC
T ss_pred CC
Confidence 97
No 178
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=80.76 E-value=15 Score=35.87 Aligned_cols=143 Identities=13% Similarity=0.131 Sum_probs=73.5
Q ss_pred EEEEeCCCCCEEeCcCC----CccccccCeecCCCcEEEEc-CCC-------CCCCeEEEEeCCCCCceeecCcCCCCcc
Q 035640 123 SVLFDFETSELTALKLQ----TDTWCSSGGLTADGDLVSTG-GFG-------GGANTVRYLSTCDGCDWREYPTALADPR 190 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~----~~~fc~~~~~l~dG~ilv~G-G~~-------~g~~~v~~fdP~~t~~W~~~~~~M~~~R 190 (596)
...||+.+++++.+... ...+.....+.++|++++.- +.. .....+..+|+. . +...+...+..+
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g-~~~~~~~~~~~p- 151 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-H-HVKKYFDQVDIS- 151 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-S-CEEEEEEEESBE-
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-C-CEEEEeeccccc-
Confidence 56789888888765432 12334455667899988853 111 122467888875 2 332222112222
Q ss_pred cccEEEEccCCc-EEEEcCCCCCcEEEe-C--CCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEc-CCC
Q 035640 191 WYSTQVTLPDGG-FIVVGGRGAFSYEYI-P--PEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLS-PDG 265 (596)
Q Consensus 191 ~y~s~~~L~dG~-VyViGG~~~~~~E~y-P--~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~-~dG 265 (596)
.+.+.-+||+ +|++.-. ...+..| . .+++... ...+... ....-+|...+. .+|
T Consensus 152 --ngi~~spdg~~lyv~~~~-~~~i~~~~~d~~~G~~~~----~~~~~~~--------------~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 152 --NGLDWSLDHKIFYYIDSL-SYSVDAFDYDLQTGQISN----RRSVYKL--------------EKEEQIPDGMCIDAEG 210 (297)
T ss_dssp --EEEEECTTSCEEEEEEGG-GTEEEEEEECTTTCCEEE----EEEEEEC--------------CGGGCEEEEEEEBTTS
T ss_pred --cceEEcCCCCEEEEecCC-CCcEEEEeccCCCCcccC----cEEEEEC--------------CCCCCCCCeeEECCCC
Confidence 2455556886 6665432 2334444 2 3321100 0000000 000124555444 789
Q ss_pred cEEEEe--cceeEEecCCCCeEEEee
Q 035640 266 NLFIFS--NNRSILLDPKANKVVREF 289 (596)
Q Consensus 266 ~Ifv~G--g~~~e~yDp~t~~w~~~l 289 (596)
+||+.. +....+||+.+++....+
T Consensus 211 ~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp CEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred CEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 999985 445889999977755433
No 179
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=79.78 E-value=44 Score=31.98 Aligned_cols=61 Identities=15% Similarity=0.034 Sum_probs=32.0
Q ss_pred cEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcc-cccEEEEccCCc-EEEEcCCCCCcEEEe-CCC
Q 035640 154 DLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPR-WYSTQVTLPDGG-FIVVGGRGAFSYEYI-PPE 220 (596)
Q Consensus 154 ~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R-~y~s~~~L~dG~-VyViGG~~~~~~E~y-P~~ 220 (596)
.++++++.. ..+.++|+. +.+....-. +.... .-..++.-+||+ +|+.+.. ...+.+| ..+
T Consensus 2 ~~~v~~~~~---~~v~~~d~~-~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPARP---DKLVVIDTE-KMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVNK-SESLVKIDLVT 65 (337)
T ss_dssp EEEEEEETT---TEEEEEETT-TTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEETT-TTEEEEEETTT
T ss_pred cEEEEcCCC---CeEEEEECC-CCcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeCC-CCeEEEEECCC
Confidence 355666543 578999987 554432111 22211 123456667885 5665543 3456666 444
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=79.28 E-value=45 Score=31.86 Aligned_cols=67 Identities=12% Similarity=-0.005 Sum_probs=38.6
Q ss_pred cCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCC
Q 035640 146 SGGLTADGD-LVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEG 221 (596)
Q Consensus 146 ~~~~l~dG~-ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~ 221 (596)
+.+..++|+ +|+++... ..+.+||+. +. ..... ... ..-.+.+.-+||++|+.... ...+..| ++++
T Consensus 32 g~~~d~~g~~l~~~~~~~---~~i~~~~~~-~~-~~~~~--~~~-~~~~~l~~~~dg~l~v~~~~-~~~i~~~d~~~g 100 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQ---NRTWAWSDD-GQ-LSPEM--HPS-HHQNGHCLNKQGHLIACSHG-LRRLERQREPGG 100 (296)
T ss_dssp EEEEEGGGTEEEEEEGGG---TEEEEEETT-SC-EEEEE--SSC-SSEEEEEECTTCCEEEEETT-TTEEEEECSTTC
T ss_pred CCeEeCCCCEEEEEeCCC---CEEEEEECC-CC-eEEEE--CCC-CCcceeeECCCCcEEEEecC-CCeEEEEcCCCC
Confidence 345556776 88877542 578999997 65 44432 111 11224445578999876532 2345666 5454
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=77.88 E-value=18 Score=35.36 Aligned_cols=83 Identities=14% Similarity=0.080 Sum_probs=46.1
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCC-CCCCeEEEEeCCCCCceee-cCcCCCCcccccEEEEccC
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFG-GGANTVRYLSTCDGCDWRE-YPTALADPRWYSTQVTLPD 200 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~-~g~~~v~~fdP~~t~~W~~-~~~~M~~~R~y~s~~~L~d 200 (596)
..+||+.+++++.+.........+.+..+||++++..... .....+.+||+. +.+... ... ......-...+.-++
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN-GDNLQDIIED-LSTAYCIDDMVFDSK 145 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-SCSCEEEECS-SSSCCCEEEEEECTT
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC-CCEEEEEEcc-CccCCcccceEECCC
Confidence 5678988888776532221222223445789998875432 112478999987 555432 211 111222234455668
Q ss_pred CcEEEEc
Q 035640 201 GGFIVVG 207 (596)
Q Consensus 201 G~VyViG 207 (596)
|++|+..
T Consensus 146 g~l~v~~ 152 (333)
T 2dg1_A 146 GGFYFTD 152 (333)
T ss_dssp SCEEEEE
T ss_pred CCEEEEe
Confidence 8888754
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=77.71 E-value=58 Score=32.19 Aligned_cols=79 Identities=19% Similarity=0.084 Sum_probs=45.1
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCccc-ccEEEEccC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRW-YSTQVTLPD 200 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~-y~s~~~L~d 200 (596)
...++|+.+.+.+.+..............+||+.+++.... ..+.++|.. +.+-..+.. .+...- +.....-+|
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~-~g~~~~~~~-~~~~~~~~~~~~~~~d 135 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLA-TLEENVVYQ-VPAEWVGYGTWVANSD 135 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETT-TCCEEEEEE-CCTTEEEEEEEEECTT
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECC-CCcceeeee-chhhcccccceeECCC
Confidence 46678999998888765433222234577899877776532 468888987 555433321 222211 112223457
Q ss_pred CcEEE
Q 035640 201 GGFIV 205 (596)
Q Consensus 201 G~VyV 205 (596)
|+.++
T Consensus 136 g~~l~ 140 (388)
T 3pe7_A 136 CTKLV 140 (388)
T ss_dssp SSEEE
T ss_pred CCeec
Confidence 77765
No 183
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=76.27 E-value=8.8 Score=36.92 Aligned_cols=103 Identities=12% Similarity=0.074 Sum_probs=58.6
Q ss_pred CCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEE-eC--CCeEEEEcCCCCCCC
Q 035640 321 KAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVI-LP--TEDILLLNGAKTGTS 396 (596)
Q Consensus 321 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avv-Lp--dG~V~vvGG~~~g~~ 396 (596)
+++.+++|+.+ ..+..+|+......++.. .+........++. .+ |++++++|+.+ |
T Consensus 22 ~~~~l~~~~~d-----------------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-g-- 81 (351)
T 3f3f_A 22 YGRHVATCSSD-----------------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-K-- 81 (351)
T ss_dssp SSSEEEEEETT-----------------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-S--
T ss_pred CCCEEEEeeCC-----------------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-C--
Confidence 56677777754 234556665434455544 3322222222233 45 69999998865 1
Q ss_pred CCCCCCCCCcccEEEcCCCCC----CCceEEecCCCcccccceEEEEcCC--CcEEEecCCCC
Q 035640 397 GWNDAEDPNLVPALYTPRGPS----RQRFKELAAGTIPRMYHSSSVLLPD--GTVLVAGSNTH 453 (596)
Q Consensus 397 g~~~~~~~~~s~e~YDP~t~~----g~~Wt~~a~~~~~R~yhs~a~LlpD--G~Vlv~GG~~~ 453 (596)
++.+||..+.. +.+|..+.........-......|+ |+.+++|+...
T Consensus 82 ----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 134 (351)
T 3f3f_A 82 ----------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG 134 (351)
T ss_dssp ----------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC
T ss_pred ----------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC
Confidence 46889887752 2345555444333333344556788 99888887643
No 184
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=75.92 E-value=37 Score=33.55 Aligned_cols=102 Identities=10% Similarity=0.023 Sum_probs=58.1
Q ss_pred EcCCCcEEEEecce--eEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccc
Q 035640 261 LSPDGNLFIFSNNR--SILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFS 338 (596)
Q Consensus 261 ~~~dG~Ifv~Gg~~--~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 338 (596)
...++.||+..|.. ...+|+++++..+.+ ++. +.+ ..|.+. .+++||+....+
T Consensus 61 ~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~--~~F-geGit~-------------~g~~Ly~ltw~~------- 115 (268)
T 3nok_A 61 VFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLG--NIF-AEGLAS-------------DGERLYQLTWTE------- 115 (268)
T ss_dssp EEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECT--TCC-EEEEEE-------------CSSCEEEEESSS-------
T ss_pred EEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC--Ccc-eeEEEE-------------eCCEEEEEEccC-------
Confidence 33478899998864 677999999876555 542 221 122332 478999975422
Q ss_pred cccccccCCCCceEEEEeeCCCCceEeecCCCCccccceEEeCCC-eEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCC
Q 035640 339 ETKKQFFPALQDCGRIDITKPNAVWKKERMPSPRVMGDMVILPTE-DILLLNGAKTGTSGWNDAEDPNLVPALYTPRGP 416 (596)
Q Consensus 339 ~~~~~~~~a~~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpdG-~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~ 416 (596)
+.+.+||+. +-+-... .+.+-. +-+++ +|| ++|+..|.. .+..+||++.
T Consensus 116 ----------~~v~V~D~~--Tl~~~~t-i~~~~e-GwGLt-~Dg~~L~vSdGs~--------------~l~~iDp~T~ 165 (268)
T 3nok_A 116 ----------GLLFTWSGM--PPQRERT-TRYSGE-GWGLC-YWNGKLVRSDGGT--------------MLTFHEPDGF 165 (268)
T ss_dssp ----------CEEEEEETT--TTEEEEE-EECSSC-CCCEE-EETTEEEEECSSS--------------EEEEECTTTC
T ss_pred ----------CEEEEEECC--cCcEEEE-EeCCCc-eeEEe-cCCCEEEEECCCC--------------EEEEEcCCCC
Confidence 345667764 3222222 222211 22233 455 566665521 5678999997
No 185
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=75.86 E-value=19 Score=36.38 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=50.8
Q ss_pred eEEEEeCCCCCEEeCc-CCC-ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCce-eecCcCCCCcccccEEEEc
Q 035640 122 HSVLFDFETSELTALK-LQT-DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDW-REYPTALADPRWYSTQVTL 198 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~-~~~-~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W-~~~~~~M~~~R~y~s~~~L 198 (596)
...+||+.+.+....- ..+ ..........+||+++++|........+.+||.. +.+- .... .+.....-.+.+.-
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~-~~~~~~~~~-~~~~~~~v~~~~~s 276 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK-HLEEPLSLQ-ELDTSSGVLLPFFD 276 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT-BCSSCSEEE-ECCCCSSCEEEEEE
T ss_pred cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc-cccCCceEE-eccCCCceeEEEEc
Confidence 4788998887654322 122 2223334566899999998322123679999976 3221 0110 12223333344555
Q ss_pred cCCcEEEEcCCCCCcEEEe
Q 035640 199 PDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 199 ~dG~VyViGG~~~~~~E~y 217 (596)
+||+.+++.|.....+.+|
T Consensus 277 ~~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 277 PDTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp TTTTEEEEEETTCSCEEEE
T ss_pred CCCCEEEEEEcCCCeEEEE
Confidence 6888776555434456666
No 186
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=73.90 E-value=1.2e+02 Score=33.86 Aligned_cols=132 Identities=12% Similarity=0.088 Sum_probs=66.5
Q ss_pred CCCcEEEEec--ceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccCCccccccc
Q 035640 263 PDGNLFIFSN--NRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQWDSFYFSET 340 (596)
Q Consensus 263 ~dG~Ifv~Gg--~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~ 340 (596)
.+|+|++.++ ....+||+.++++. .+.. ....... .-.+++ ...+|.|.+... .
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~-~~~~-~~~~~~~--~~~~i~----------~d~~g~lWigt~-~--------- 536 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVT-KLFA-DELTGEK--SPNYLL----------CDEDGLLWVGFH-G--------- 536 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEE-EECT-TTSCGGG--CEEEEE----------ECTTSCEEEEET-T---------
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceE-EecC-CCcCCCc--ccceEE----------ECCCCCEEEEec-C---------
Confidence 4789998543 34678999998875 3421 1000000 111221 124677776431 1
Q ss_pred cccccCCCCceEEEEeeCCCCceEee---cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCC
Q 035640 341 KKQFFPALQDCGRIDITKPNAVWKKE---RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPS 417 (596)
Q Consensus 341 ~~~~~~a~~s~~~id~~~~~~~W~~~---~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~ 417 (596)
-..+||+. +.+++.. .++... ..+++..+|+|++... .| ..+|||++.
T Consensus 537 ---------Gl~~~~~~--~~~~~~~~~~gl~~~~--i~~i~~~~g~lWi~t~--~G-------------l~~~~~~~~- 587 (758)
T 3ott_A 537 ---------GVMRINPK--DESQQSISFGSFSNNE--ILSMTCVKNSIWVSTT--NG-------------LWIIDRKTM- 587 (758)
T ss_dssp ---------EEEEECC----CCCCBCCCCC---CC--EEEEEEETTEEEEEES--SC-------------EEEEETTTC-
T ss_pred ---------ceEEEecC--CCceEEecccCCCccc--eEEEEECCCCEEEECC--CC-------------eEEEcCCCc-
Confidence 13356654 3333221 333322 2234445888887542 12 368999998
Q ss_pred CCceEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 418 RQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 418 g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
++.... ++... ..+.+....||++|++|-+
T Consensus 588 --~~~~~~-~~~~~-~~~~~~~~~~G~l~fG~~~ 617 (758)
T 3ott_A 588 --DARQQN-MTNKR-FTSLLFDPKEDCVYLGGAD 617 (758)
T ss_dssp --CEEEC---CCCC-CSEEEEETTTTEEEEECBS
T ss_pred --eeEEec-CCCCc-eeeeEEECCCCcEEEecCC
Confidence 776543 11111 2234445679999998754
No 187
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=73.44 E-value=35 Score=33.14 Aligned_cols=60 Identities=13% Similarity=0.025 Sum_probs=37.5
Q ss_pred EEeC-CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceE-EecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 378 VILP-TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFK-ELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 378 vvLp-dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt-~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
...| +++++++|+.+ | ++.+||..+. +-. .+..+......-......|||+.+++|+...
T Consensus 122 ~~~~~~~~~l~s~~~d-g------------~i~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKD-H------------ALRLWNIQTD---TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp EECSSCTTEEEEEETT-S------------CEEEEETTTT---EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCCCEEEEEeCC-C------------eEEEEEeecC---eEEEEecccccccCceeEEEECCCCCEEEEecCCC
Confidence 4457 89999998864 1 5789998876 432 2221122222233445568999999998654
No 188
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=72.61 E-value=88 Score=31.88 Aligned_cols=64 Identities=6% Similarity=-0.039 Sum_probs=34.3
Q ss_pred eecCC-CcEEEEcCCCCCCCeEEEEeCCCCC--------ceeecCcCCCC-cccccEEEEccCCc-EEEEcCCCCCcEEE
Q 035640 148 GLTAD-GDLVSTGGFGGGANTVRYLSTCDGC--------DWREYPTALAD-PRWYSTQVTLPDGG-FIVVGGRGAFSYEY 216 (596)
Q Consensus 148 ~~l~d-G~ilv~GG~~~g~~~v~~fdP~~t~--------~W~~~~~~M~~-~R~y~s~~~L~dG~-VyViGG~~~~~~E~ 216 (596)
.+.++ +.++++|+.. ..|.+||.. +. +...... +.. ...-.+.+..++++ +++.|+.++ .+.+
T Consensus 135 ~~~p~~~~~lat~~~d---g~V~vwd~~-~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg-~i~v 208 (430)
T 2xyi_A 135 RYMPQNACVIATKTPS---SDVLVFDYT-KHPSKPEPSGECQPDLR-LRGHQKEGYGLSWNPNLNGYLLSASDDH-TICL 208 (430)
T ss_dssp EEETTEEEEEEEECSS---SCEEEEEGG-GSCSSCCTTCCCCCSEE-EECCSSCCCCEEECTTSTTEEEEECTTS-CEEE
T ss_pred EECCCCCcEEEEECCC---CcEEEEECC-CcccccCccccCCCcEE-ecCCCCCeEEEEeCCCCCCeEEEEeCCC-eEEE
Confidence 34555 6788888754 358888864 21 1211111 111 11122345556777 888887654 4556
Q ss_pred e
Q 035640 217 I 217 (596)
Q Consensus 217 y 217 (596)
|
T Consensus 209 w 209 (430)
T 2xyi_A 209 W 209 (430)
T ss_dssp E
T ss_pred E
Confidence 6
No 189
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=69.63 E-value=8.8 Score=37.79 Aligned_cols=56 Identities=14% Similarity=0.135 Sum_probs=34.3
Q ss_pred CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCC--CcEEEecCCCC
Q 035640 382 TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPD--GTVLVAGSNTH 453 (596)
Q Consensus 382 dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpD--G~Vlv~GG~~~ 453 (596)
+|++++.|+.+. ++.+||.++. +|..+..+......-.+...-|| |+++++|+...
T Consensus 70 ~~~~l~s~s~D~-------------~v~iWd~~~~---~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~ 127 (316)
T 3bg1_A 70 YGNILASCSYDR-------------KVIIWREENG---TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 127 (316)
T ss_dssp GSSCEEEEETTS-------------CEEEECCSSS---CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS
T ss_pred CCCEEEEEECCC-------------EEEEEECCCC---cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC
Confidence 488888888651 5789999887 66543322111111123344576 88888888654
No 190
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=67.74 E-value=1.1e+02 Score=31.27 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=22.7
Q ss_pred cceEEEc-CCCcEEEEec--ceeEEecCCCCeEE
Q 035640 256 YPFVYLS-PDGNLFIFSN--NRSILLDPKANKVV 286 (596)
Q Consensus 256 yp~~~~~-~dG~Ifv~Gg--~~~e~yDp~t~~w~ 286 (596)
+|+..++ ++|+||+... ....++|+.+++..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~ 165 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT 165 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE
Confidence 4554444 7999999865 46788999987764
No 191
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=66.54 E-value=1.7e+02 Score=32.69 Aligned_cols=138 Identities=10% Similarity=0.098 Sum_probs=75.1
Q ss_pred EEEEeCCCCCEEeCcCCC-----ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCc--CCCCcccccEE
Q 035640 123 SVLFDFETSELTALKLQT-----DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPT--ALADPRWYSTQ 195 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~-----~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~--~M~~~R~y~s~ 195 (596)
..+||+.+++|+...... ..+........+|+|++..- . ..+.+||+. +.++..... .++...- .+.
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~---~Gl~~~~~~-~~~~~~~~~~~~l~~~~i-~~i 544 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G---GGVGIYTPD-MQLVRKFNQYEGFCSNTI-NQI 544 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S---SCEEEECTT-CCEEEEECTTTTCSCSCE-EEE
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C---CCEEEEeCC-CCeEEEccCCCCCCCCee-EEE
Confidence 567899888886653221 12222233456788887532 1 237789998 777765531 2332221 233
Q ss_pred EEccCCcEEEEcCCCCCcE-EEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc
Q 035640 196 VTLPDGGFIVVGGRGAFSY-EYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN 273 (596)
Q Consensus 196 ~~L~dG~VyViGG~~~~~~-E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~ 273 (596)
+.-.+|+|++... ... -.| |.++++. ... ..+ |. +.+..-....-.+|+||+.+.+
T Consensus 545 ~~d~~g~lWi~T~---~Glv~~~d~~~~~~~----~~~----~~~---gl--------~~~~i~~i~~d~~g~lW~~t~~ 602 (781)
T 3v9f_A 545 YRSSKGQMWLATG---EGLVCFPSARNFDYQ----VFQ----RKE---GL--------PNTHIRAISEDKNGNIWASTNT 602 (781)
T ss_dssp EECTTSCEEEEET---TEEEEESCTTTCCCE----EEC----GGG---TC--------SCCCCCEEEECSSSCEEEECSS
T ss_pred EECCCCCEEEEEC---CCceEEECCCCCcEE----Ecc----ccC---CC--------CCceEEEEEECCCCCEEEEcCC
Confidence 3335788887532 223 455 6555331 110 000 00 1111112333468999998888
Q ss_pred eeEEecCCCCeEEEee
Q 035640 274 RSILLDPKANKVVREF 289 (596)
Q Consensus 274 ~~e~yDp~t~~w~~~l 289 (596)
...+|||.+.++. .+
T Consensus 603 Gl~~~~~~~~~~~-~~ 617 (781)
T 3v9f_A 603 GISCYITSKKCFY-TY 617 (781)
T ss_dssp CEEEEETTTTEEE-EE
T ss_pred ceEEEECCCCceE-Ee
Confidence 8889999998875 44
No 192
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=65.42 E-value=88 Score=31.84 Aligned_cols=92 Identities=12% Similarity=0.059 Sum_probs=51.8
Q ss_pred CCceEEEEee---CCCCceEee-c-CCCC-------c--cccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcC
Q 035640 348 LQDCGRIDIT---KPNAVWKKE-R-MPSP-------R--VMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTP 413 (596)
Q Consensus 348 ~~s~~~id~~---~~~~~W~~~-~-M~~~-------R--~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP 413 (596)
.+.+.+||+. .....|... + .... + ..-++++=++|.+||++-... ..+.++||
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~------------~~I~rV~p 166 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM------------PAIARVSA 166 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS------------CEEEEECT
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC------------CeEEEEeC
Confidence 4567889976 345567654 2 1111 2 233567788999999865320 14678888
Q ss_pred CCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 414 RGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 414 ~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
+...-..|-.-.+....|..-.-.+..|||+.|++-..
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 76522345432222233433334455689977666544
No 193
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=65.32 E-value=19 Score=39.31 Aligned_cols=133 Identities=18% Similarity=0.147 Sum_probs=68.5
Q ss_pred CCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCCCccccCCCCCCcceEEEEcCCCCCCCCCCCCCeeeeCCCCC
Q 035640 415 GPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTHNGYILDAKYPTELRVEKFSPPYLDPSLAWLRPSIVVDSSDK 494 (596)
Q Consensus 415 t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl~~~~~~~RP~i~~~~~p~ 494 (596)
.|.|++|+....+.......+..+.++||+|+++.=.. . ..+...|....|... ..| . ... +.
T Consensus 305 ~D~G~tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-~----------~i~~~~~~~~~l~~~---~~~-~-~~~-~~ 367 (601)
T 1w8o_A 305 CDDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG-T----------GIRYANFNLAWLGGI---CAP-F-TIP-DV 367 (601)
T ss_dssp SSTTSCCCEEEEEEEEECCCEEEEECTTSCEEEEECCS-S----------EEEEEEECHHHHTBC---SCC-E-ECC-CE
T ss_pred CCCCCCCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC-C----------cceEEEecHHHhccc---cCC-C-cCc-cc
Confidence 45677998654332223333455568999999885322 1 235556777776431 122 2 221 45
Q ss_pred eeecCCeEEEEEEeccccccccCeEEEEEEeCCcccccCCCCCceEEeeeeeeeeccCCCCCC-ceEEEEEcCCCCCcCC
Q 035640 495 VIHYGQRFSVKVKSNELTVKNRDDLKLTMYAPAFTTHGISMNQRLLILSLVKVIKNVGPATEG-LHDIIALAPSSGAVAP 573 (596)
Q Consensus 495 ~~~~g~~~~v~~~~~~~~~~~~~~~~v~lv~~~~~THs~n~~QR~v~L~~~~~~~~~~~~~~g-~~~~~v~~P~~~~v~p 573 (596)
++..|++++|+++..........-.+++|..+...|= +- .+.... + +.+ ...++|++|.. +.
T Consensus 368 ~~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~------~-g~~~t~~~~vt~~~~---~~ 430 (601)
T 1w8o_A 368 ALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQV------QG-SVEPLM------P-GRQAKGQVTITVPAG---TT 430 (601)
T ss_dssp EECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEE------EE-EECCBC------T-TCEEEEEEEEECCTT---CC
T ss_pred eecCCceeEEEEEEECCCceeccCceEEEecCCCcEE------ec-cccccC------C-CCceEEEEEEecCCC---CC
Confidence 6788988877766422111111224677665544431 11 111111 1 111 22347778775 55
Q ss_pred CcceEEEE
Q 035640 574 PGYYLLYV 581 (596)
Q Consensus 574 PG~ymLFv 581 (596)
+|.|+|=+
T Consensus 431 ~g~y~l~~ 438 (601)
T 1w8o_A 431 PGRYRVGA 438 (601)
T ss_dssp CEEEEEEE
T ss_pred CCcEEeeE
Confidence 89998744
No 194
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=64.61 E-value=49 Score=32.05 Aligned_cols=137 Identities=15% Similarity=0.054 Sum_probs=69.8
Q ss_pred EEEEeCCCCCEEeCcCCC----ccccccCeecCCCcEEEE----cCCC----------CCCCeEEEEeCCCCCceeecCc
Q 035640 123 SVLFDFETSELTALKLQT----DTWCSSGGLTADGDLVST----GGFG----------GGANTVRYLSTCDGCDWREYPT 184 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~----~~fc~~~~~l~dG~ilv~----GG~~----------~g~~~v~~fdP~~t~~W~~~~~ 184 (596)
...||+. ++.+.+.... .......++.+||+++++ |-.. .+...+.+|||. +.+++.+.
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-~g~~~~~~- 185 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-GSPLQRMA- 185 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-SCCCEEEE-
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC-CCcEEEEe-
Confidence 5567765 5555543211 112233456679999996 4321 013578999997 66665543
Q ss_pred CCCCcccccEEEEccCCc-EEEEcCCC----CCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccce
Q 035640 185 ALADPRWYSTQVTLPDGG-FIVVGGRG----AFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYPF 258 (596)
Q Consensus 185 ~M~~~R~y~s~~~L~dG~-VyViGG~~----~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~ 258 (596)
.+..+ .+.+.-+||+ +|+..-.. ...+..| ...+... ....+... ..-+|.
T Consensus 186 ~~~~p---~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~----~~~~~~~~----------------~~~~pd 242 (305)
T 3dr2_A 186 DLDHP---NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALH----DRRHFASV----------------PDGLPD 242 (305)
T ss_dssp EESSE---EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEE----EEEEEECC----------------SSSCCC
T ss_pred cCCCC---cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCcc----CCeEEEEC----------------CCCCCC
Confidence 23222 2455667887 66654321 1344445 2221000 00000000 001222
Q ss_pred -EEEcCCCcEEEEecceeEEecCCCCeE
Q 035640 259 -VYLSPDGNLFIFSNNRSILLDPKANKV 285 (596)
Q Consensus 259 -~~~~~dG~Ifv~Gg~~~e~yDp~t~~w 285 (596)
...-.+|+||+..+....+||+.....
T Consensus 243 gi~~d~~G~lwv~~~~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 243 GFCVDRGGWLWSSSGTGVCVFDSDGQLL 270 (305)
T ss_dssp SEEECTTSCEEECCSSEEEEECTTSCEE
T ss_pred eEEECCCCCEEEecCCcEEEECCCCCEE
Confidence 234578999988777788999965543
No 195
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=63.92 E-value=2.1e+02 Score=32.86 Aligned_cols=106 Identities=8% Similarity=0.034 Sum_probs=56.7
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCC
Q 035640 148 GLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKS 226 (596)
Q Consensus 148 ~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~ 226 (596)
++-+||+++++|+.+ ..|++||.. +.+-... +.....-.+++-.+ |+.++.|+.+ .++.+| ..+.+-
T Consensus 24 afspdg~~lAsgs~D---g~I~lw~~~-~~~~~~~---~~~~~~V~~l~fsp-g~~L~S~s~D-~~v~lWd~~~~~~--- 91 (902)
T 2oaj_A 24 AFDFTQNLLAIATVT---GEVHIYGQQ-QVEVVIK---LEDRSAIKEMRFVK-GIYLVVINAK-DTVYVLSLYSQKV--- 91 (902)
T ss_dssp EEETTTTEEEEEETT---SEEEEECST-TCEEEEE---CSSCCCEEEEEEET-TTEEEEEETT-CEEEEEETTTCSE---
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC-CcEEEEE---cCCCCCEEEEEEcC-CCEEEEEECc-CeEEEEECCCCcE---
Confidence 455689999999865 579999976 4432211 22222222333344 7766666543 567777 433210
Q ss_pred cccccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEecc--eeEEecCCCCeE
Q 035640 227 PVFFPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFSNN--RSILLDPKANKV 285 (596)
Q Consensus 227 ~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~Gg~--~~e~yDp~t~~w 285 (596)
+..+... ... -.+...++|+.++.|.. ...+||..+.+.
T Consensus 92 ---~~~~~~~----------------~~V-~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 92 ---LTTVFVP----------------GKI-TSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp ---EEEEECS----------------SCE-EEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred ---EEEEcCC----------------CCE-EEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 0000000 000 01223478988888865 467899888764
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=62.33 E-value=49 Score=31.97 Aligned_cols=55 Identities=9% Similarity=-0.002 Sum_probs=34.9
Q ss_pred eEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCc--ccccceEEEEcCCCcEEEec
Q 035640 377 MVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTI--PRMYHSSSVLLPDGTVLVAG 449 (596)
Q Consensus 377 avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~--~R~yhs~a~LlpDG~Vlv~G 449 (596)
.+.-+||++|+..+. .+.+||+++. +++.+..... +..........+||++|++-
T Consensus 59 i~~~~dG~l~v~~~~---------------~l~~~d~~~g---~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 59 VALRQSGGYVATIGT---------------KFCALNWKEQ---SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp EEEBTTSSEEEEETT---------------EEEEEETTTT---EEEEEEECCTTCSSEEEEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEEECC---------------eEEEEECCCC---cEEEEEecCCCCCCCCCCCEEECCCCCEEEec
Confidence 345689997765311 3579999998 8877654421 22222334567899999864
No 197
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=62.24 E-value=1e+02 Score=30.16 Aligned_cols=26 Identities=23% Similarity=0.318 Sum_probs=18.7
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCC
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGP 416 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~ 416 (596)
..-|||+.++.||.+. ++.+||....
T Consensus 125 ~~sp~~~~l~s~~~d~-------------~i~~wd~~~~ 150 (343)
T 2xzm_R 125 AFSPDNRQILSAGAER-------------EIKLWNILGE 150 (343)
T ss_dssp EECSSTTEEEEEETTS-------------CEEEEESSSC
T ss_pred EECCCCCEEEEEcCCC-------------EEEEEeccCC
Confidence 4568999999988651 4678887643
No 198
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=61.57 E-value=99 Score=28.40 Aligned_cols=90 Identities=10% Similarity=0.009 Sum_probs=45.2
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDG 201 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG 201 (596)
....+|..+++.+.+..... .......+||+.+++.+..++...+..+|.. +.+...+.. ....-...+.-+||
T Consensus 111 ~l~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~-~~~~~~~~~---~~~~~~~~~~s~dg 184 (297)
T 2ojh_A 111 AIYLLPSTGGTPRLMTKNLP--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDID-SGVETRLTH---GEGRNDGPDYSPDG 184 (297)
T ss_dssp EEEEEETTCCCCEECCSSSS--EEEEEECTTSSEEEEEEEETTEEEEEEEETT-TCCEEECCC---SSSCEEEEEECTTS
T ss_pred eEEEEECCCCceEEeecCCC--ccceEECCCCCEEEEEECCCCceEEEEEECC-CCcceEccc---CCCccccceECCCC
Confidence 34566777776666544332 2223566788866643322233345555565 555544422 11222344455788
Q ss_pred cEEEEcCCCCCcEEEe
Q 035640 202 GFIVVGGRGAFSYEYI 217 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y 217 (596)
+.+++++.......+|
T Consensus 185 ~~l~~~~~~~~~~~i~ 200 (297)
T 2ojh_A 185 RWIYFNSSRTGQMQIW 200 (297)
T ss_dssp SEEEEEECTTSSCEEE
T ss_pred CEEEEEecCCCCccEE
Confidence 8666655433334444
No 199
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=61.36 E-value=1.1e+02 Score=28.80 Aligned_cols=88 Identities=13% Similarity=0.103 Sum_probs=45.5
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCC
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDG 201 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG 201 (596)
...+||..+++.......+...+. ....++.++++|+.. ..+..++.. ....... ................+|
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l~s~~~~---~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSRS---GHIHHHDVR-VAEHHVA-TLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEE--EEEEETTEEEEEETT---SEEEEEETT-SSSCEEE-EEECCSSCEEEEEECTTS
T ss_pred cEEEeecCCceeEEEecCccceEE--EeecCCCEEEEEecC---CceEeeecC-CCceeEE-EEcCccCceEEEEEcCCC
Confidence 367888888765433222222221 233467888888754 345556544 2222111 101112223344556688
Q ss_pred cEEEEcCCCCCcEEEe
Q 035640 202 GFIVVGGRGAFSYEYI 217 (596)
Q Consensus 202 ~VyViGG~~~~~~E~y 217 (596)
+.++.|+.++ .+.+|
T Consensus 163 ~~l~s~~~d~-~i~iw 177 (318)
T 4ggc_A 163 RHLASGGNDN-LVNVW 177 (318)
T ss_dssp SEEEEEETTS-CEEEE
T ss_pred CEEEEEecCc-ceeEE
Confidence 8888887654 45666
No 200
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=60.52 E-value=1.5e+02 Score=30.27 Aligned_cols=65 Identities=15% Similarity=0.084 Sum_probs=33.6
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCCC
Q 035640 381 PTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTHN 454 (596)
Q Consensus 381 pdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~~ 454 (596)
-||+||..|-...|.-|.. ... ....+-|..-...+...++. -.+|+ ++|..||+||..|.+..+
T Consensus 260 ~~g~v~~wG~n~~gqlg~~--~~~--~~~~~~p~~~~~~~v~~ia~----G~~ht-~alt~~G~v~~wG~n~~G 324 (423)
T 3mvd_K 260 QTQVIWATGLNNFKQLAHE--TKG--KEFALTPIKTELKDIRHIAG----GQHHT-VILTTDLKCSVVGRPEYG 324 (423)
T ss_dssp TTCCEEEEEECTTCTTSSC--CTT--CSEEEEEEEECCCSEEEEEE----CSSEE-EEEETTCCEEEEECCGGG
T ss_pred CCCeEEEEeCCCCCcCCCC--CCC--CceeeeeEEcCCCCeEEEEc----ccCeE-EEEeCCCcEEEEECCCCC
Confidence 6999999986554433321 100 11111221110113444332 23555 456689999999987554
No 201
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=59.12 E-value=1.3e+02 Score=29.01 Aligned_cols=112 Identities=14% Similarity=0.188 Sum_probs=58.7
Q ss_pred cceEEEc-CCCcEEEEe--cceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCCEEEEEcCccC
Q 035640 256 YPFVYLS-PDGNLFIFS--NNRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKAKVLVCGGAQW 332 (596)
Q Consensus 256 yp~~~~~-~dG~Ifv~G--g~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~ 332 (596)
+|...+. ++|+||+.- +....+||+.+.. ...+ ..+. .| .+.++ ..++++|++.....
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~-~~~~----~p-~gia~------------~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHA-TVEG----KV-SGLAF------------TSNGDLVATGWNAD 93 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEE-ECSS----EE-EEEEE------------CTTSCEEEEEECTT
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEE-eCCC----Cc-eeEEE------------cCCCcEEEEeccCC
Confidence 4554444 789999885 3457788988653 2222 2221 11 22222 13678888753210
Q ss_pred CccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEE
Q 035640 333 DSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALY 411 (596)
Q Consensus 333 ~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~Y 411 (596)
. ..+.++|+. +.+.+.. ..+..|...+.+..+++++|+..-.. ..+.++
T Consensus 94 -~--------------~~v~~~d~~--~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~-------------g~i~~~ 143 (306)
T 2p4o_A 94 -S--------------IPVVSLVKS--DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYR-------------GAIWLI 143 (306)
T ss_dssp -S--------------CEEEEEECT--TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTT-------------TEEEEE
T ss_pred -c--------------ceEEEEcCC--CCeEEEEEeCCCccccCcccccCCCcEEEEECCC-------------CeEEEE
Confidence 0 124456643 4555544 44444443333446677788754211 156788
Q ss_pred cCCCC
Q 035640 412 TPRGP 416 (596)
Q Consensus 412 DP~t~ 416 (596)
|+.+.
T Consensus 144 d~~~~ 148 (306)
T 2p4o_A 144 DVVQP 148 (306)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 88765
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=57.77 E-value=1.8e+02 Score=30.08 Aligned_cols=55 Identities=27% Similarity=0.180 Sum_probs=32.9
Q ss_pred eEEEEeCCCCCEEe-CcCCC------ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCc
Q 035640 122 HSVLFDFETSELTA-LKLQT------DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCD 178 (596)
Q Consensus 122 ~~~~yDp~t~~w~~-l~~~~------~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~ 178 (596)
.+.+||+.|++... +.... .....+..+.+||+.+.+.... ..+++.++|.. +.+
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-~~~~VsVID~~-t~~ 171 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-PAPAVGVVDLE-GKA 171 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-SSCEEEEEETT-TTE
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-CCCeEEEEECC-CCc
Confidence 57899999998653 32211 2234455677898754443221 13678889987 554
No 203
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=57.50 E-value=1.2e+02 Score=32.97 Aligned_cols=121 Identities=7% Similarity=0.111 Sum_probs=61.1
Q ss_pred cCCCcEEEEec--ceeEEecC-CCCe--EEEeeccccCCCCCCCC-----CceEEeccccccccccccCCCEEEEEcCcc
Q 035640 262 SPDGNLFIFSN--NRSILLDP-KANK--VVREFPILTGGSRNYPA-----SAMSVLLPLKLRANNATATKAKVLVCGGAQ 331 (596)
Q Consensus 262 ~~dG~Ifv~Gg--~~~e~yDp-~t~~--w~~~lp~mp~~~R~~p~-----~g~av~lpl~~~~~~~~~~~gkI~v~GG~~ 331 (596)
+.+|+||+... .....+|. .+++ |...+.. +...+.++. .+.+ ..+++||+... +
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~~~~-------------~~~~~v~v~~~-d 124 (571)
T 2ad6_A 60 VIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQ-DASTKAVMCCDVVDRGLA-------------YGAGQIVKKQA-N 124 (571)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEECCCC-CGGGGGGCTTCSCCCCCE-------------EETTEEEEECT-T
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCC-CccccccccccccccccE-------------EECCEEEEEeC-C
Confidence 45899999876 35788998 7655 6432211 100010000 1112 14788887543 1
Q ss_pred CCccccccccccccCCCCceEEEEeeCCCCceEee-cCC-CCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccE
Q 035640 332 WDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMP-SPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPA 409 (596)
Q Consensus 332 ~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~-~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e 409 (596)
..+..+|.......|+.. .-. .......+-++.+|+||+..+... + + .--.+.
T Consensus 125 -----------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~----~--~--~~g~v~ 179 (571)
T 2ad6_A 125 -----------------GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAE----L--G--VRGAVN 179 (571)
T ss_dssp -----------------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGG----G--T--CCCEEE
T ss_pred -----------------CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCc----c--C--CCCEEE
Confidence 134567765445578865 211 111111223445899887543210 0 0 011568
Q ss_pred EEcCCCCCCCceEE
Q 035640 410 LYTPRGPSRQRFKE 423 (596)
Q Consensus 410 ~YDP~t~~g~~Wt~ 423 (596)
.||+++.+ ..|+.
T Consensus 180 a~D~~tG~-~~W~~ 192 (571)
T 2ad6_A 180 AFDLKTGE-LKWRA 192 (571)
T ss_dssp EEETTTCC-EEEEE
T ss_pred EEECCCCc-EEEEE
Confidence 99998762 25764
No 204
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=55.71 E-value=1.7e+02 Score=29.20 Aligned_cols=65 Identities=9% Similarity=0.105 Sum_probs=39.5
Q ss_pred CeecCCC-cEEEEcCCCCCCCeEEEEeCCCCCceeec-CcCCCCcc-------------cccEEEEccCCcEEEEcCCCC
Q 035640 147 GGLTADG-DLVSTGGFGGGANTVRYLSTCDGCDWREY-PTALADPR-------------WYSTQVTLPDGGFIVVGGRGA 211 (596)
Q Consensus 147 ~~~l~dG-~ilv~GG~~~g~~~v~~fdP~~t~~W~~~-~~~M~~~R-------------~y~s~~~L~dG~VyViGG~~~ 211 (596)
..+.++| .++++|+.+ ..+++||.. +.+.... ...+.... .-.+++.-+||+.++.|+.
T Consensus 232 ~~~~p~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-- 305 (447)
T 3dw8_B 232 AEFHPNSCNTFVYSSSK---GTIRLCDMR-ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-- 305 (447)
T ss_dssp EEECSSCTTEEEEEETT---SCEEEEETT-TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--
T ss_pred EEECCCCCcEEEEEeCC---CeEEEEECc-CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--
Confidence 3456788 899998864 468999986 4442100 00011111 2334556678999988876
Q ss_pred CcEEEe
Q 035640 212 FSYEYI 217 (596)
Q Consensus 212 ~~~E~y 217 (596)
..+.+|
T Consensus 306 ~~v~iw 311 (447)
T 3dw8_B 306 LSVKVW 311 (447)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 667777
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=52.40 E-value=1.6e+02 Score=28.25 Aligned_cols=67 Identities=16% Similarity=0.271 Sum_probs=35.7
Q ss_pred eEEeCCCeEEEEc---CCCCCCCCCC-CCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCc-EEEecC
Q 035640 377 MVILPTEDILLLN---GAKTGTSGWN-DAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGT-VLVAGS 450 (596)
Q Consensus 377 avvLpdG~V~vvG---G~~~g~~g~~-~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~-Vlv~GG 450 (596)
.++-+||+||+.- |......+.. ........+.+|||++. +++.+..+.. .....+-|||+ +|++..
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g---~~~~~~~~~~----p~gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS---PLQRMADLDH----PNGLAFSPDEQTLYVSQT 207 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC---CCEEEEEESS----EEEEEECTTSSEEEEEEC
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC---cEEEEecCCC----CcceEEcCCCCEEEEEec
Confidence 5677899999973 2210000000 00111235788999888 7766542211 12234578998 677654
No 206
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=51.66 E-value=19 Score=38.67 Aligned_cols=89 Identities=12% Similarity=0.097 Sum_probs=54.4
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEE-----
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQV----- 196 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~----- 196 (596)
...++|+.+++++.+.... .........+||+.++.+. .++...+.++|.. +.+...... .. ..-...+
T Consensus 176 ~i~~~d~~~g~~~~l~~~~-~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~-~~~~~~~~~-~~--~~~~~~~~~~~~ 249 (582)
T 3o4h_A 176 SLFTSNLSSGGLRVFDSGE-GSFSSASISPGMKVTAGLE-TAREARLVTVDPR-DGSVEDLEL-PS--KDFSSYRPTAIT 249 (582)
T ss_dssp EEEEEETTTCCCEEECCSS-CEEEEEEECTTSCEEEEEE-CSSCEEEEEECTT-TCCEEECCC-SC--SHHHHHCCSEEE
T ss_pred EEEEEcCCCCCceEeecCC-CccccceECCCCCEEEEcc-CCCeeEEEEEcCC-CCcEEEccC-CC--cChhhhhhcccc
Confidence 3678899999988775332 2234556788999888543 2344579999987 666652221 11 1111112
Q ss_pred ---EccCCcEEEEcCCCCCcEEEe
Q 035640 197 ---TLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 197 ---~L~dG~VyViGG~~~~~~E~y 217 (596)
.-+||++++.+..++ ...+|
T Consensus 250 ~~~~spdg~~~~~~~~~g-~~~l~ 272 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREG-RSAVF 272 (582)
T ss_dssp EEEECTTSCEEEEEEETT-EEEEE
T ss_pred ceeEcCCCcEEEEEEcCC-cEEEE
Confidence 457998888776543 45666
No 207
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=51.18 E-value=1.5e+02 Score=30.76 Aligned_cols=130 Identities=9% Similarity=0.069 Sum_probs=69.2
Q ss_pred CCcEEEEec-ceeEEecCCCCeEEEeeccccCCCCCCCCCceEEeccccccccccccCCC-EEEEEcCccCCcccccccc
Q 035640 264 DGNLFIFSN-NRSILLDPKANKVVREFPILTGGSRNYPASAMSVLLPLKLRANNATATKA-KVLVCGGAQWDSFYFSETK 341 (596)
Q Consensus 264 dG~Ifv~Gg-~~~e~yDp~t~~w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~~~g-kI~v~GG~~~~~~~~~~~~ 341 (596)
+|+||+.-. ....++|+.+++... +.. . -..| .+.++ ..++ .||++.-.. +.
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~-~~~--~--~~~P-~~ia~------------d~~G~~lyvad~~~-~~------- 202 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVST-VYS--G--LSKV-RTICW------------THEADSMIITNDQN-NN------- 202 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEE-EEC--C--CSCE-EEEEE------------CTTSSEEEEEECCS-CT-------
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEE-Eec--C--CCCc-ceEEE------------eCCCCEEEEEeCCC-Cc-------
Confidence 488888754 556789999888753 422 1 1111 12222 1244 488876432 11
Q ss_pred ccccCCCCceEEEEeeCCCCceE---ee-cCCCCccccceEEeC-CCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCC
Q 035640 342 KQFFPALQDCGRIDITKPNAVWK---KE-RMPSPRVMGDMVILP-TEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGP 416 (596)
Q Consensus 342 ~~~~~a~~s~~~id~~~~~~~W~---~~-~M~~~R~~~~avvLp-dG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~ 416 (596)
....+..++.. ..|. .. .+..+ ++.++-| +|+||+.--.. ..+.+||+++.
T Consensus 203 -----~~~~v~~~~~~---g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~~~-------------~~V~~~~~~~~ 258 (430)
T 3tc9_A 203 -----DRPNNYILTRE---SGFKVITELTKGQNC---NGAETHPINGELYFNSWNA-------------GQVFRYDFTTQ 258 (430)
T ss_dssp -----TSEEEEEEEGG---GTSCSEEEEEECSSC---CCEEECTTTCCEEEEETTT-------------TEEEEEETTTT
T ss_pred -----ccceEEEEeCC---CceeeeeeeccCCCc---eEEEEeCCCCEEEEEECCC-------------CEEEEEECCCC
Confidence 01123334432 2332 22 34333 3345677 89999975321 15789999876
Q ss_pred CCCceEEecC---CCcccccceEEEEcCCCc-EEEecC
Q 035640 417 SRQRFKELAA---GTIPRMYHSSSVLLPDGT-VLVAGS 450 (596)
Q Consensus 417 ~g~~Wt~~a~---~~~~R~yhs~a~LlpDG~-Vlv~GG 450 (596)
..+.+.. ...|+ ..++-|||+ +|++-.
T Consensus 259 ---~~~~~~~~~~~~~P~----gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 259 ---ETTPLFTIQDSGWEF----HIQFHPSGNYAYIVVV 289 (430)
T ss_dssp ---EEEEEEECSSSSCCE----EEEECTTSSEEEEEET
T ss_pred ---cEEEEEEcCCCCcce----eEEEcCCCCEEEEEEC
Confidence 4433322 22333 244578998 898853
No 208
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=49.79 E-value=1.8e+02 Score=27.68 Aligned_cols=21 Identities=33% Similarity=0.607 Sum_probs=15.0
Q ss_pred EcCCCcEEEEec-ceeEEecCC
Q 035640 261 LSPDGNLFIFSN-NRSILLDPK 281 (596)
Q Consensus 261 ~~~dG~Ifv~Gg-~~~e~yDp~ 281 (596)
...+|+||+... ....+||+.
T Consensus 144 ~~~~g~l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 144 VSEDGTIYVGSNDNYLYAINPD 165 (330)
T ss_dssp ECTTSCEEEECTTSEEEEECTT
T ss_pred EcCCCEEEEEcCCCEEEEECCC
Confidence 345888887654 457789998
No 209
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=46.99 E-value=84 Score=31.13 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=37.3
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCccc---------------ccc---eEEEE
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPR---------------MYH---SSSVL 439 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R---------------~yh---s~a~L 439 (596)
..-|||+.++.|+.+. ++.+||..++...++..+..+-.++ ..+ .....
T Consensus 247 ~~s~~~~~l~s~s~d~-------------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 313 (355)
T 3vu4_A 247 KWSTDGSKLAVVSDKW-------------TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW 313 (355)
T ss_dssp EECTTSCEEEEEETTC-------------EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE
T ss_pred EECCCCCEEEEEECCC-------------EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE
Confidence 4568999999988641 5788887665333444433311111 011 34456
Q ss_pred cCCCcEEEecCCC
Q 035640 440 LPDGTVLVAGSNT 452 (596)
Q Consensus 440 lpDG~Vlv~GG~~ 452 (596)
-+||+.+++|+..
T Consensus 314 ~~d~~~l~~~~~d 326 (355)
T 3vu4_A 314 ISESSLVVVWPHT 326 (355)
T ss_dssp SSSSEEEEEETTT
T ss_pred eCCCCEEEEEeCC
Confidence 7899988888763
No 210
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=46.11 E-value=1.8e+02 Score=31.29 Aligned_cols=90 Identities=16% Similarity=0.100 Sum_probs=49.0
Q ss_pred eEEEEeCCCCCEEeCcCCCccc-----c---ccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCccccc
Q 035640 122 HSVLFDFETSELTALKLQTDTW-----C---SSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYS 193 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~f-----c---~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~ 193 (596)
....+|+.+++++.+....... . ....+.++|++++++.. +...+..+|.. +.+...+.. .. ....
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~-~~~~~~l~~--~~-~~~~ 339 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE-SGELVDAAG--PW-TEWA 339 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT-TTEEEECCS--SC-CEEE
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC-CCcEEEecC--CC-CeEE
Confidence 4667888888888875432211 1 12233468999888765 55677778986 666655532 11 1222
Q ss_pred EEEEccCCcEEEEcCCCCCcEEEe
Q 035640 194 TQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 194 s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
......+++++++.+......++|
T Consensus 340 ~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 340 ATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEE
T ss_pred EEEecCCCEEEEEEcCCCCCCEEE
Confidence 221333445555554443333444
No 211
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=45.30 E-value=2.5e+02 Score=28.25 Aligned_cols=65 Identities=2% Similarity=-0.138 Sum_probs=34.8
Q ss_pred eecCCCc-EEEEcCCCCCCCeEEEEeCCCCC---ceeecC-cCCC-CcccccEEEEcc-CCcEEEEcCCCCCcEEEe
Q 035640 148 GLTADGD-LVSTGGFGGGANTVRYLSTCDGC---DWREYP-TALA-DPRWYSTQVTLP-DGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 148 ~~l~dG~-ilv~GG~~~g~~~v~~fdP~~t~---~W~~~~-~~M~-~~R~y~s~~~L~-dG~VyViGG~~~~~~E~y 217 (596)
...+++. ++++|+.+ ..+.+||.. +. .+.... ..+. ....-.+++..+ ++.+++.|+.++ .+.+|
T Consensus 188 ~~~~~~~~~l~s~~~d---g~i~vwd~~-~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-~i~i~ 259 (430)
T 2xyi_A 188 SWNPNLNGYLLSASDD---HTICLWDIN-ATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ-KLMIW 259 (430)
T ss_dssp EECTTSTTEEEEECTT---SCEEEEETT-SCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS-EEEEE
T ss_pred EeCCCCCCeEEEEeCC---CeEEEEeCC-CCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC-eEEEE
Confidence 4456777 88888764 468899976 41 121110 0011 111122334444 678888887653 46666
No 212
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.95 E-value=1.3e+02 Score=29.51 Aligned_cols=56 Identities=20% Similarity=0.159 Sum_probs=35.3
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecC-CCcEEEEcCCC-------------CCCCeEEEEeCCCCCceeec
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTA-DGDLVSTGGFG-------------GGANTVRYLSTCDGCDWREY 182 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~-dG~ilv~GG~~-------------~g~~~v~~fdP~~t~~W~~~ 182 (596)
..+||+.+++.+.+..... +. ....+ ||+++++.+.. .+...+.++|+. +.+...+
T Consensus 266 l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~l 335 (396)
T 3c5m_A 266 IYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK-AKSAQKL 335 (396)
T ss_dssp EEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT-TTBCCEE
T ss_pred EEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc-cCceEEc
Confidence 6788998888776543221 22 45567 99988875421 134678999987 6654443
No 213
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=42.41 E-value=2.4e+02 Score=30.93 Aligned_cols=65 Identities=12% Similarity=0.020 Sum_probs=39.8
Q ss_pred cCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCce--------eecCcCCC-CcccccEEEEccCCcEEEEcCCCCCcEEE
Q 035640 146 SGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDW--------REYPTALA-DPRWYSTQVTLPDGGFIVVGGRGAFSYEY 216 (596)
Q Consensus 146 ~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W--------~~~~~~M~-~~R~y~s~~~L~dG~VyViGG~~~~~~E~ 216 (596)
+.++-+||+.+++||.+ ..+++||.. ++.- ..+...+. ...|=.+++-.+|| ++.++.+ .++.+
T Consensus 134 svafSPDG~~LAsgs~D---GtVkIWd~~-~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D-~tVrl 206 (588)
T 2j04_A 134 CFEWNPIESSIVVGNED---GELQFFSIR-KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN-NSVFS 206 (588)
T ss_dssp EEEECSSSSCEEEEETT---SEEEEEECC-CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT-CCEEE
T ss_pred EEEEcCCCCEEEEEcCC---CEEEEEECC-CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC-CeEEE
Confidence 44567899999999975 579999987 5421 11100011 12355566777788 5666654 45666
Q ss_pred e
Q 035640 217 I 217 (596)
Q Consensus 217 y 217 (596)
|
T Consensus 207 W 207 (588)
T 2j04_A 207 M 207 (588)
T ss_dssp E
T ss_pred E
Confidence 6
No 214
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=41.91 E-value=4e+02 Score=29.55 Aligned_cols=77 Identities=14% Similarity=0.191 Sum_probs=41.2
Q ss_pred EEEEeCCCCCEEeCcCCC-------ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCc------CCCCc
Q 035640 123 SVLFDFETSELTALKLQT-------DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPT------ALADP 189 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~-------~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~------~M~~~ 189 (596)
..+||+.+++++...... ...-.......+|.|+|.- . ..+.+||+. +.++..... .+...
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~----~Gl~~~~~~-~~~~~~~~~~~~~~~~l~~~ 310 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-F----NDLNIYHEG-TDSFASYSSNPVENGSLSQR 310 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-S----SCEEEEETT-TTEEEEECCCTTSTTSCSSS
T ss_pred eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-C----ChhheEcCC-CCeEEEEecCCCCCCCCCCC
Confidence 457888888877653221 1111112234578888743 1 137889988 777765431 12222
Q ss_pred ccccEEEEccCCcEEEE
Q 035640 190 RWYSTQVTLPDGGFIVV 206 (596)
Q Consensus 190 R~y~s~~~L~dG~VyVi 206 (596)
. -.+...=.+|.+++-
T Consensus 311 ~-i~~i~~D~~g~lWig 326 (795)
T 4a2l_A 311 S-VRSIFMDSQGGMWLG 326 (795)
T ss_dssp C-EEEEEECTTSCEEEE
T ss_pred c-EEEEEEeCCcCEEEE
Confidence 2 223334446888873
No 215
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=41.60 E-value=70 Score=32.27 Aligned_cols=90 Identities=11% Similarity=-0.007 Sum_probs=47.1
Q ss_pred eEEEEeCCCCCEEeC-cCC-CccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEc-
Q 035640 122 HSVLFDFETSELTAL-KLQ-TDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTL- 198 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l-~~~-~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L- 198 (596)
...+||..+.+.... ... +........+.++|+++++|+.+ ..+++||.. +.+....-. +.....-.+++..
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~~~-~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIR-FNVLIRSWS-FGDHAPITHVEVCQ 267 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETT-TTEEEEEEB-CTTCEEEEEEEECT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcC-CccEEEEEe-cCCCCceEEEEecc
Confidence 367888887664322 211 22222233456789999999865 468999987 544322100 1111111111111
Q ss_pred ---cCCcEEEEcCCCCCcEEEe
Q 035640 199 ---PDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 199 ---~dG~VyViGG~~~~~~E~y 217 (596)
+||+.++.|+.++ .+.+|
T Consensus 268 ~~s~~~~~l~s~~~dg-~i~iw 288 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKT-FLTIW 288 (437)
T ss_dssp TTCTTEEEEEEESTTE-EEEEE
T ss_pred ccCCCccEEEEEcCCC-cEEEE
Confidence 3677888777653 34454
No 216
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=38.81 E-value=4e+02 Score=28.68 Aligned_cols=110 Identities=9% Similarity=-0.011 Sum_probs=57.6
Q ss_pred CCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcCCCCCcEEEe-CCCCCCCCCccc
Q 035640 151 ADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVF 229 (596)
Q Consensus 151 ~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~ 229 (596)
+++.+||+... ...+.++|+. +.+-.. . +..+..-+.++.-+||+.+.+++.+ ..+..| ....+-. .
T Consensus 165 ~~~~~~V~~~~---~~~V~viD~~-t~~v~~--~-i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t~~----~ 232 (567)
T 1qks_A 165 LENLFSVTLRD---AGQIALIDGS-TYEIKT--V-LDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKEPT----T 232 (567)
T ss_dssp GGGEEEEEETT---TTEEEEEETT-TCCEEE--E-EECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCC----E
T ss_pred CCceEEEEeCC---CCeEEEEECC-CCeEEE--E-EeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCCCc----E
Confidence 34667777543 3579999987 654332 1 3334333466667788754444443 345555 4211000 1
Q ss_pred ccCcccccccCCCcCCcceeeeccCccceEEEc-----CCCcEEEEec---ceeEEecCCCCeEEEeec
Q 035640 230 FPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLS-----PDGNLFIFSN---NRSILLDPKANKVVREFP 290 (596)
Q Consensus 230 ~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~-----~dG~Ifv~Gg---~~~e~yDp~t~~w~~~lp 290 (596)
. ... .-...|+.+.+ +||+..++++ ....++|..+.+-.+.++
T Consensus 233 v---~~i---------------~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 233 V---AEI---------------KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp E---EEE---------------ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred e---EEE---------------ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 0 000 01123444443 4897655554 356788988877654443
No 217
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=38.80 E-value=1.5e+02 Score=31.89 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=53.1
Q ss_pred eEEEEeCC-CC---CEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCc---CCCCccccc-
Q 035640 122 HSVLFDFE-TS---ELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPT---ALADPRWYS- 193 (596)
Q Consensus 122 ~~~~yDp~-t~---~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~---~M~~~R~y~- 193 (596)
...++|.. ++ +.+.+..............+||++++++... +...+..+|+. +.++..+.. ....+.|.+
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~-~~~~l~~~~~~-~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT-GWWNLHRVDPA-TGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT-SSCEEEEECTT-TCCEEESSCCSSBSSCCCCSTT
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC-CCeEEEEEECC-CCceeecccccccccCcccccc
Confidence 46778887 56 4444432211222233456899988776543 44578999987 777776542 112234432
Q ss_pred --EEEEccCCcEEEEcCCCCCcEEEe
Q 035640 194 --TQVTLPDGGFIVVGGRGAFSYEYI 217 (596)
Q Consensus 194 --s~~~L~dG~VyViGG~~~~~~E~y 217 (596)
+.+..+||++++.+.. ....+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~--~~~~l~ 319 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK--GAAVLG 319 (662)
T ss_dssp CCSEEECTTSCEEEEEBS--SSCEEE
T ss_pred CceEeEeCCCEEEEEEEc--CccEEE
Confidence 3445568998888765 334444
No 218
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=38.30 E-value=2.8e+02 Score=26.67 Aligned_cols=93 Identities=9% Similarity=0.039 Sum_probs=42.7
Q ss_pred ceEEEEeeCCC-CceEee-cCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCC
Q 035640 350 DCGRIDITKPN-AVWKKE-RMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAG 427 (596)
Q Consensus 350 s~~~id~~~~~-~~W~~~-~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~ 427 (596)
.+.+|++.... ..++.. .++.| .+.++-++|+|||........ .. .......+.+|||+.. ....+..-
T Consensus 208 ~I~~~~~~~~~~~~~~~~~~~~gP---~gi~~d~~G~l~va~~~~~~~--~~-~~~~~~~v~~~d~~G~---~~~~~~~~ 278 (322)
T 2fp8_A 208 QIVKYWLEGPKKGTAEVLVKIPNP---GNIKRNADGHFWVSSSEELDG--NM-HGRVDPKGIKFDEFGN---ILEVIPLP 278 (322)
T ss_dssp EEEEEESSSTTTTCEEEEEECSSE---EEEEECTTSCEEEEEEEETTS--ST-TSCEEEEEEEECTTSC---EEEEEECC
T ss_pred eEEEEECCCCcCCccceEEeCCCC---CCeEECCCCCEEEEecCcccc--cc-cCCCccEEEEECCCCC---EEEEEECC
Confidence 45667765221 233333 33222 224556789999986431000 00 0000124689998754 44433321
Q ss_pred CcccccceEEEEcCCCcEEEecCC
Q 035640 428 TIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 428 ~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
.-....+-+++...+|++||+...
T Consensus 279 ~g~~~~~~~~~~~~~g~L~v~~~~ 302 (322)
T 2fp8_A 279 PPFAGEHFEQIQEHDGLLYIGTLF 302 (322)
T ss_dssp TTTTTSCCCEEEEETTEEEEECSS
T ss_pred CCCccccceEEEEeCCEEEEeecC
Confidence 100011222333469999998643
No 219
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=36.85 E-value=4.6e+02 Score=28.82 Aligned_cols=126 Identities=10% Similarity=-0.014 Sum_probs=63.5
Q ss_pred EEEEeCCCCCEEeCcCC--C-ccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecC-cCCCCcccccEEEEc
Q 035640 123 SVLFDFETSELTALKLQ--T-DTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYP-TALADPRWYSTQVTL 198 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~--~-~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~-~~M~~~R~y~s~~~L 198 (596)
..+||+.+++++.+... . +....+.....+|+|++... ..+.+|||. +.++.... +.|+... ..+..-
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~-----~Gl~~~~~~-~~~~~~~~~~gl~~~~--i~~i~~ 566 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH-----GGVMRINPK-DESQQSISFGSFSNNE--ILSMTC 566 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET-----TEEEEECC---CCCCBCCCCC---CC--EEEEEE
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec-----CceEEEecC-CCceEEecccCCCccc--eEEEEE
Confidence 56789999988876321 1 11111123345799987542 248899998 77665442 1243322 222233
Q ss_pred cCCcEEEEcCCCCCcEEEe-CCCCCCCCCcccccCcccccccCCCcCCcceeeeccCccc-eEEEcCCCcEEEEecceeE
Q 035640 199 PDGGFIVVGGRGAFSYEYI-PPEGQSNKSPVFFPLLKDTTNDLKGIDGQEMFLIENNLYP-FVYLSPDGNLFIFSNNRSI 276 (596)
Q Consensus 199 ~dG~VyViGG~~~~~~E~y-P~~~~w~~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~yp-~~~~~~dG~Ifv~Gg~~~e 276 (596)
.+|++++... ...-+| |.+.+.. ... + +.+.+. ......+|+||+-+.+...
T Consensus 567 ~~g~lWi~t~---~Gl~~~~~~~~~~~----~~~-~------------------~~~~~~~~~~~~~~G~l~fG~~~Gl~ 620 (758)
T 3ott_A 567 VKNSIWVSTT---NGLWIIDRKTMDAR----QQN-M------------------TNKRFTSLLFDPKEDCVYLGGADGFG 620 (758)
T ss_dssp ETTEEEEEES---SCEEEEETTTCCEE----EC---------------------CCCCCSEEEEETTTTEEEEECBSEEE
T ss_pred CCCCEEEECC---CCeEEEcCCCceeE----Eec-C------------------CCCceeeeEEECCCCcEEEecCCceE
Confidence 4788887652 224455 7654221 000 0 001111 2233468999877767777
Q ss_pred EecCCC
Q 035640 277 LLDPKA 282 (596)
Q Consensus 277 ~yDp~t 282 (596)
.|||..
T Consensus 621 ~f~p~~ 626 (758)
T 3ott_A 621 ISHSNL 626 (758)
T ss_dssp EEEC--
T ss_pred EEChhh
Confidence 888874
No 220
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=36.74 E-value=2.1e+02 Score=31.29 Aligned_cols=155 Identities=15% Similarity=0.220 Sum_probs=0.0
Q ss_pred EcCCCcEEEEec--ceeEEecC-CCCe--EEEeeccccCCCCCCCCCceEEecccccccccccc--CCCE----EEEEcC
Q 035640 261 LSPDGNLFIFSN--NRSILLDP-KANK--VVREFPILTGGSRNYPASAMSVLLPLKLRANNATA--TKAK----VLVCGG 329 (596)
Q Consensus 261 ~~~dG~Ifv~Gg--~~~e~yDp-~t~~--w~~~lp~mp~~~R~~p~~g~av~lpl~~~~~~~~~--~~gk----I~v~GG 329 (596)
++.+|+||+... ..+..+|. .+++ |. .-+..+...+..+.+.... ....+ .+++ ||+...
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~-~~~~~~~~~~~~~~~~~~~--------~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 59 LVVDGKMYIHTSFPNNTFALGLDDPGTILWQ-DKPKQNPAARAVACCDLVN--------RGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEE-ECCCCCGGGGGGCSSCSCC--------CCCEEECCCSSSCCEEEEECT
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCCcEEEE-ECCCCCccccccccccccc--------cceEEEecCCcceeEEEEEcC
Q ss_pred ccCCccccccccccccCCCCceEEEEeeCCCCceEee--cCCCCccccceEEeCCCeEEE-EcCCCCCCCCCCCCCCCCc
Q 035640 330 AQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE--RMPSPRVMGDMVILPTEDILL-LNGAKTGTSGWNDAEDPNL 406 (596)
Q Consensus 330 ~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~--~M~~~R~~~~avvLpdG~V~v-vGG~~~g~~g~~~~~~~~~ 406 (596)
.. .+..+|.......|+.. .-.......++-++.+|+||+ .+|...+..+
T Consensus 130 dg------------------~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g--------- 182 (599)
T 1w6s_A 130 DG------------------NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRG--------- 182 (599)
T ss_dssp TS------------------EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCC---------
T ss_pred CC------------------EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCC---------
Q ss_pred ccEEEcCCCCCCCceEEecCCCccc-----------------------------------ccceEEEEcCCCcEEEecCC
Q 035640 407 VPALYTPRGPSRQRFKELAAGTIPR-----------------------------------MYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 407 s~e~YDP~t~~g~~Wt~~a~~~~~R-----------------------------------~yhs~a~LlpDG~Vlv~GG~ 451 (596)
.+..||+++. ...|+.-...+... ...+.++-..+|+||+.-|+
T Consensus 183 ~v~A~D~~TG-~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~ 261 (599)
T 1w6s_A 183 YLTAYDVKTG-EQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGN 261 (599)
T ss_dssp EEEEEETTTC-CEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCC
T ss_pred eEEEEECCCC-cEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCC
Q ss_pred C
Q 035640 452 T 452 (596)
Q Consensus 452 ~ 452 (596)
.
T Consensus 262 ~ 262 (599)
T 1w6s_A 262 P 262 (599)
T ss_dssp C
T ss_pred C
No 221
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=35.56 E-value=1.1e+02 Score=30.73 Aligned_cols=62 Identities=8% Similarity=0.024 Sum_probs=36.0
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCC-CceeecCcCCCCcccc----------------cEEEEccCCcEEEEcCC
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLSTCDG-CDWREYPTALADPRWY----------------STQVTLPDGGFIVVGGR 209 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t-~~W~~~~~~M~~~R~y----------------~s~~~L~dG~VyViGG~ 209 (596)
..+.++|+++++|+. ..+++||.. + .+- +.. +...... ..++.-+||+.++.|+.
T Consensus 291 ~~~s~~g~~l~~~~~----~~v~iwd~~-~~~~~--~~~-~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~ 362 (447)
T 3dw8_B 291 VKFSHSGRYMMTRDY----LSVKVWDLN-MENRP--VET-YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSY 362 (447)
T ss_dssp EEECTTSSEEEEEES----SEEEEEETT-CCSSC--SCC-EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECS
T ss_pred EEECCCCCEEEEeeC----CeEEEEeCC-CCccc--cce-eeccccccccccccccccccccceEEEECCCCCEEEEecc
Confidence 455679999999875 579999976 3 221 111 1111110 11556678998888886
Q ss_pred CCCcEEEe
Q 035640 210 GAFSYEYI 217 (596)
Q Consensus 210 ~~~~~E~y 217 (596)
++ .+.+|
T Consensus 363 dg-~v~iw 369 (447)
T 3dw8_B 363 NN-FFRMF 369 (447)
T ss_dssp TT-EEEEE
T ss_pred CC-EEEEE
Confidence 53 34444
No 222
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=34.56 E-value=4e+02 Score=27.42 Aligned_cols=32 Identities=13% Similarity=0.053 Sum_probs=21.9
Q ss_pred cceEEEc-C---CCcEEEEec-ceeEEecCCCCeEEE
Q 035640 256 YPFVYLS-P---DGNLFIFSN-NRSILLDPKANKVVR 287 (596)
Q Consensus 256 yp~~~~~-~---dG~Ifv~Gg-~~~e~yDp~t~~w~~ 287 (596)
.|...++ + +|+||+.-. +...++|+.+++...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~ 176 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI 176 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE
Confidence 4555444 4 389998744 567889998888753
No 223
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=33.66 E-value=5e+02 Score=28.24 Aligned_cols=109 Identities=13% Similarity=0.162 Sum_probs=62.5
Q ss_pred eeeeccCCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCEEeCcCCCccccccCeecCCCc
Q 035640 75 HAILLPKINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSELTALKLQTDTWCSSGGLTADGD 154 (596)
Q Consensus 75 ~~~ll~~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ 154 (596)
..... +|||.+++.....|. + +....++|..+++........ ......+..+||+
T Consensus 129 ~~~~S-PDg~~la~~~~~~G~----------------------~-~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~ 183 (710)
T 2xdw_A 129 GYAFS-EDGEYFAYGLSASGS----------------------D-WVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGK 183 (710)
T ss_dssp EEEEC-TTSSEEEEEEEETTC----------------------S-CEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSS
T ss_pred EEEEC-CCCCEEEEEEcCCCC----------------------c-eEEEEEEECCCCCCCcccccC-cccceEEEEeCCC
Confidence 34555 899988887654221 0 235778899999887643211 1122345677998
Q ss_pred EEEEcCCCCC-------------CCeEEEEeCCCCCcee--ecCcCCCCcccccEEEEccCCcEEEEcCC
Q 035640 155 LVSTGGFGGG-------------ANTVRYLSTCDGCDWR--EYPTALADPRWYSTQVTLPDGGFIVVGGR 209 (596)
Q Consensus 155 ilv~GG~~~g-------------~~~v~~fdP~~t~~W~--~~~~~M~~~R~y~s~~~L~dG~VyViGG~ 209 (596)
.++++..... ...+++++.. +.+.. .+-..-....+..+...-+||+.+++...
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 184 GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLG-TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETT-SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EEEEEEECCccccccccccccCCCCEEEEEECC-CCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 7776644322 2458888876 55422 11010112445556777789987666543
No 224
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=33.34 E-value=86 Score=32.28 Aligned_cols=73 Identities=16% Similarity=0.196 Sum_probs=39.7
Q ss_pred ccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCCCC
Q 035640 374 MGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSNTH 453 (596)
Q Consensus 374 ~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~~~ 453 (596)
.|..++.-||+||..|-...|.-|.+...+....+..-....+ +...++. -.+|+.|+ ..||+||.-|.+..
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~---~v~~ia~----G~~hs~al-t~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE---KIVSVGC----GEVCSYAV-TIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS---CEEEEEE----ETTEEEEE-ETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC---CEEEEEc----CCCeEEEE-cCCCCEEEECCCCC
Confidence 3555677799999999765554333221111112222111111 2333322 24676655 68999999998765
Q ss_pred C
Q 035640 454 N 454 (596)
Q Consensus 454 ~ 454 (596)
+
T Consensus 376 G 376 (423)
T 3mvd_K 376 N 376 (423)
T ss_dssp S
T ss_pred C
Confidence 5
No 225
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=32.63 E-value=51 Score=30.63 Aligned_cols=34 Identities=41% Similarity=0.839 Sum_probs=25.6
Q ss_pred CCceEEEEEcCCCCCcCCCcceEEEEEc-----------CC----------cCCccEEEEe
Q 035640 556 EGLHDIIALAPSSGAVAPPGYYLLYVVY-----------KG----------VPSVAMWVQI 595 (596)
Q Consensus 556 ~g~~~~~v~~P~~~~v~pPG~ymLFv~~-----------~g----------vPS~a~~v~i 595 (596)
.|..+-.+++|.. |||||+|-| +| ||..+-||.|
T Consensus 277 agaftksitlpkt------gyymlyvanvlevddwsvdadgkltttgevwevpakgcwvni 331 (336)
T 2vov_A 277 AGAFTKSITLPKT------GYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNI 331 (336)
T ss_dssp TTEEEEEEECSSS------EEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEE
T ss_pred cceeeeeeeccCc------ceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEE
Confidence 4566677778865 999999854 12 8888999887
No 226
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=32.49 E-value=3.4e+02 Score=25.93 Aligned_cols=77 Identities=16% Similarity=0.083 Sum_probs=41.0
Q ss_pred ceeeeeccCCCEEEEEeeeccCCCCCCCCCCCCCccccccccCccccceeEEEEeCCCCCEEeCcCCCccccccCeecCC
Q 035640 73 AMHAILLPKINKVLMYDATVWRTSKIPLPPQKMPCRVADHITGELDCWCHSVLFDFETSELTALKLQTDTWCSSGGLTAD 152 (596)
Q Consensus 73 a~~~~ll~~~gkV~~~g~~~~g~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~d 152 (596)
+-++++- ++|++|+.+... + ....||+..+.-+.... .. .-.+.++..|
T Consensus 34 pegia~~-~~g~lyv~d~~~----------~------------------~I~~~d~~g~~~~~~~~-~~-~p~gia~~~d 82 (306)
T 2p4o_A 34 LENLASA-PDGTIFVTNHEV----------G------------------EIVSITPDGNQQIHATV-EG-KVSGLAFTSN 82 (306)
T ss_dssp EEEEEEC-TTSCEEEEETTT----------T------------------EEEEECTTCCEEEEEEC-SS-EEEEEEECTT
T ss_pred cceEEEC-CCCCEEEEeCCC----------C------------------eEEEECCCCceEEEEeC-CC-CceeEEEcCC
Confidence 4456665 789988876321 1 24566766532211111 11 1223345678
Q ss_pred CcEEEEcCCCCCCCeEEEEeCCCCCceeec
Q 035640 153 GDLVSTGGFGGGANTVRYLSTCDGCDWREY 182 (596)
Q Consensus 153 G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~ 182 (596)
|++||+....+ ...+..||+. +.+...+
T Consensus 83 G~l~vad~~~~-~~~v~~~d~~-~g~~~~~ 110 (306)
T 2p4o_A 83 GDLVATGWNAD-SIPVVSLVKS-DGTVETL 110 (306)
T ss_dssp SCEEEEEECTT-SCEEEEEECT-TSCEEEE
T ss_pred CcEEEEeccCC-cceEEEEcCC-CCeEEEE
Confidence 99988753221 1347778876 5555444
No 227
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=32.37 E-value=4.3e+02 Score=27.10 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=44.1
Q ss_pred CceEEEEeeCCCCceEee-cCCC-Cc-----cccceEEeCCCe-EEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCc
Q 035640 349 QDCGRIDITKPNAVWKKE-RMPS-PR-----VMGDMVILPTED-ILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQR 420 (596)
Q Consensus 349 ~s~~~id~~~~~~~W~~~-~M~~-~R-----~~~~avvLpdG~-V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~ 420 (596)
+.+..||.. +.+-... +.+. +| .-....+-|||+ +||.+... -.++-+.|.++. +
T Consensus 109 ~~VsviD~~--t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~------------~~~VsVID~~t~---~ 171 (386)
T 3sjl_D 109 DYVEVFDPV--TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP------------APAVGVVDLEGK---A 171 (386)
T ss_dssp EEEEEECTT--TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS------------SCEEEEEETTTT---E
T ss_pred CEEEEEECC--CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC------------CCeEEEEECCCC---c
Confidence 456778765 4443332 4432 12 223356779997 56554321 015678998887 3
Q ss_pred eEEecCCCcc-------cccceEEEEcCCCcEEEecCCC
Q 035640 421 FKELAAGTIP-------RMYHSSSVLLPDGTVLVAGSNT 452 (596)
Q Consensus 421 Wt~~a~~~~~-------R~yhs~a~LlpDG~Vlv~GG~~ 452 (596)
-. +..+.+ -.-+....+-+||++++..-..
T Consensus 172 vv--~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 172 FK--RMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EE--EEEECCSEEEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred EE--EEEECCCcceeecCCCceeEEECCCCCEEEEECCC
Confidence 32 222221 1112223456799988887544
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=32.27 E-value=2.6e+02 Score=27.12 Aligned_cols=54 Identities=11% Similarity=0.071 Sum_probs=33.7
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCc--ccccceEEEEcCCCcEEEec
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTI--PRMYHSSSVLLPDGTVLVAG 449 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~--~R~yhs~a~LlpDG~Vlv~G 449 (596)
...+||++|+... . .+.+||+++. +++.+..... +.........-+||++|++.
T Consensus 96 ~~~~dg~l~v~~~--~-------------gl~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 151 (326)
T 2ghs_A 96 AKISDSKQLIASD--D-------------GLFLRDTATG---VLTLHAELESDLPGNRSNDGRMHPSGALWIGT 151 (326)
T ss_dssp EEEETTEEEEEET--T-------------EEEEEETTTC---CEEEEECSSTTCTTEEEEEEEECTTSCEEEEE
T ss_pred EEeCCCeEEEEEC--C-------------CEEEEECCCC---cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEe
Confidence 4468999988641 1 2578999888 7776654321 11222234567899999865
No 229
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=32.12 E-value=2.1e+02 Score=33.10 Aligned_cols=84 Identities=10% Similarity=-0.003 Sum_probs=49.9
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCC-------CCCeEEEEeCCCCCceeecCcCCCCcccccE
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGG-------GANTVRYLSTCDGCDWREYPTALADPRWYST 194 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~-------g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s 194 (596)
...+||..+++.+.+...+.......++.+||+.+++++... ....++++|.. +.+...+.. ....-.+
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~-~g~~~~l~~---~~~~~~~ 476 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME-GRKIFAATT---ENSHDYA 476 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT-TTEEEECSC---SSSBEEE
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC-CCcEEEeeC---CCcccCC
Confidence 367899999887766433333333445678999888765421 23579999987 665444322 1111223
Q ss_pred EEEccCCcEEEEcCC
Q 035640 195 QVTLPDGGFIVVGGR 209 (596)
Q Consensus 195 ~~~L~dG~VyViGG~ 209 (596)
.+--+||+.++++..
T Consensus 477 ~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 477 PAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEECTTSCEEEEEES
T ss_pred ceEcCCCCEEEEEec
Confidence 445678886655543
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=30.51 E-value=3.3e+02 Score=26.37 Aligned_cols=75 Identities=12% Similarity=0.018 Sum_probs=43.1
Q ss_pred EEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcC---CCCcccccEEEEcc
Q 035640 123 SVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTA---LADPRWYSTQVTLP 199 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~---M~~~R~y~s~~~L~ 199 (596)
...||+.+++.+........ .+....+||++++... ..+.+||+. +.+...+... ....| -...+.-+
T Consensus 73 i~~~d~~~~~~~~~~~~~~v--~~i~~~~dg~l~v~~~-----~gl~~~d~~-~g~~~~~~~~~~~~~~~~-~~~i~~d~ 143 (326)
T 2ghs_A 73 LHELHLASGRKTVHALPFMG--SALAKISDSKQLIASD-----DGLFLRDTA-TGVLTLHAELESDLPGNR-SNDGRMHP 143 (326)
T ss_dssp EEEEETTTTEEEEEECSSCE--EEEEEEETTEEEEEET-----TEEEEEETT-TCCEEEEECSSTTCTTEE-EEEEEECT
T ss_pred EEEEECCCCcEEEEECCCcc--eEEEEeCCCeEEEEEC-----CCEEEEECC-CCcEEEEeeCCCCCCCCC-CCCEEECC
Confidence 56788888776554322222 2233557899888652 348999997 7776554320 11122 22345556
Q ss_pred CCcEEEE
Q 035640 200 DGGFIVV 206 (596)
Q Consensus 200 dG~VyVi 206 (596)
+|++|+.
T Consensus 144 ~G~l~v~ 150 (326)
T 2ghs_A 144 SGALWIG 150 (326)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 8888764
No 231
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=30.35 E-value=3.7e+02 Score=25.82 Aligned_cols=101 Identities=17% Similarity=0.216 Sum_probs=57.1
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeC--CCCCceeecCcCCCCc--ccccEEEEccCCcEEEEcCCCCCcEEEe-CCCC
Q 035640 147 GGLTADGDLVSTGGFGGGANTVRYLST--CDGCDWREYPTALADP--RWYSTQVTLPDGGFIVVGGRGAFSYEYI-PPEG 221 (596)
Q Consensus 147 ~~~l~dG~ilv~GG~~~g~~~v~~fdP--~~t~~W~~~~~~M~~~--R~y~s~~~L~dG~VyViGG~~~~~~E~y-P~~~ 221 (596)
..+-++|.||++ .++ .+.+.+| ...+.|...+...-.. +-++....-++|.||++. ++.-+... |...
T Consensus 93 ~~fD~~G~LYav---~dG--~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 93 LFFDPNGYLYAV---SKD--KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSN 165 (236)
T ss_dssp EEECTTSCEEEE---ETT--EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSST
T ss_pred EEECCCCCEEEe---CCC--EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCC
Confidence 445678999999 223 5667777 3255786543211111 235677778899999998 33333344 4322
Q ss_pred CCCCCccc-ccCcccccccCCCcCCcceeeeccCccceEEEcCCCcEEEEe
Q 035640 222 QSNKSPVF-FPLLKDTTNDLKGIDGQEMFLIENNLYPFVYLSPDGNLFIFS 271 (596)
Q Consensus 222 ~w~~~~~~-~p~l~~t~~~~~g~~~~~~~~~~~~~yp~~~~~~dG~Ifv~G 271 (596)
...|.. ...+-+ ...+.|++.+..++|.||.+-
T Consensus 166 --~~~wl~~~~~~g~---------------~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 166 --QDNWLARATKIGQ---------------GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp --TCCHHHHCEEEES---------------SSGGGEEEEEECTTSCEEEEE
T ss_pred --Ccccccccceecc---------------CCcceEEEEEECCCCcEEEEe
Confidence 111211 111110 134568888888899999874
No 232
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=30.16 E-value=1.4e+02 Score=33.08 Aligned_cols=99 Identities=7% Similarity=0.110 Sum_probs=52.1
Q ss_pred CCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCc-------cccceEEeCCCeEEEEcCC
Q 035640 320 TKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPR-------VMGDMVILPTEDILLLNGA 391 (596)
Q Consensus 320 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R-------~~~~avvLpdG~V~vvGG~ 391 (596)
.+++||++... ..+..+|.......|+.. ..+... ....++++-+++||+....
T Consensus 65 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d 126 (668)
T 1kv9_A 65 HDGVIYTSMSW------------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD 126 (668)
T ss_dssp ETTEEEEEEGG------------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT
T ss_pred ECCEEEEECCC------------------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC
Confidence 48889887542 235567776445678875 332110 0011244568888875421
Q ss_pred CCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecCC
Q 035640 392 KTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 392 ~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG~ 451 (596)
+ .+.++|+++.+ ..|+.-..-.........+-++.+|+||+..++
T Consensus 127 --g------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~ 171 (668)
T 1kv9_A 127 --G------------RLIALDAKTGK-AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG 171 (668)
T ss_dssp --S------------EEEEEETTTCC-EEEEEECSCTTSSCBCCSCCEEETTEEEECCBC
T ss_pred --C------------EEEEEECCCCC-EeeeeccCCCCCcceecCCCEEECCEEEEeCCC
Confidence 1 46789988762 258754321111111222222348999986543
No 233
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=30.10 E-value=6.1e+02 Score=28.16 Aligned_cols=39 Identities=15% Similarity=0.044 Sum_probs=27.4
Q ss_pred EcCCCCCCCceEEecCCCcc--cccceEEEEcCCCcEEEec
Q 035640 411 YTPRGPSRQRFKELAAGTIP--RMYHSSSVLLPDGTVLVAG 449 (596)
Q Consensus 411 YDP~t~~g~~Wt~~a~~~~~--R~yhs~a~LlpDG~Vlv~G 449 (596)
++-.++.|++|+.......+ ..+.+..+.++||+|+++=
T Consensus 617 ~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ily 657 (686)
T 2jkb_A 617 LVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLF 657 (686)
T ss_dssp EECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEE
T ss_pred EEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEE
Confidence 46667778899987665443 2445667778999998775
No 234
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=29.24 E-value=4.9e+02 Score=26.75 Aligned_cols=48 Identities=17% Similarity=0.109 Sum_probs=31.6
Q ss_pred CcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEEcC
Q 035640 153 GDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVVGG 208 (596)
Q Consensus 153 G~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyViGG 208 (596)
|+||++=-. ..++++|+. +.+.+.+...+..+ .+.+.-++|++||.--
T Consensus 153 g~Lyv~D~~----~~I~~id~~-~g~v~~~~~~~~~P---~giavd~dG~lyVad~ 200 (433)
T 4hw6_A 153 DDLYWVGQR----DAFRHVDFV-NQYVDIKTTNIGQC---ADVNFTLNGDMVVVDD 200 (433)
T ss_dssp CEEEEECBT----SCEEEEETT-TTEEEEECCCCSCE---EEEEECTTCCEEEEEC
T ss_pred CEEEEEeCC----CCEEEEECC-CCEEEEeecCCCCc---cEEEECCCCCEEEEcC
Confidence 888887322 679999997 67766554323222 2456667899998853
No 235
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=28.50 E-value=4e+02 Score=25.49 Aligned_cols=90 Identities=11% Similarity=-0.023 Sum_probs=46.2
Q ss_pred EEEEeCCCCCEEeCcCC----CccccccCeecC-CCcEEEEcCCC--------------CCCCeEEEEeCCCCCceeecC
Q 035640 123 SVLFDFETSELTALKLQ----TDTWCSSGGLTA-DGDLVSTGGFG--------------GGANTVRYLSTCDGCDWREYP 183 (596)
Q Consensus 123 ~~~yDp~t~~w~~l~~~----~~~fc~~~~~l~-dG~ilv~GG~~--------------~g~~~v~~fdP~~t~~W~~~~ 183 (596)
...||+.+++.+.+... ...+....++.+ +|+||+.-... .....+.+||+. +.+.....
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~~~ 181 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS-TKETTLLL 181 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT-TTEEEEEE
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC-CCEEEEec
Confidence 34566665544443211 112334455677 89999974211 112468899997 66554332
Q ss_pred cCCCCcccccEEEEccCCc-EEEEcCCCCCcEEEe
Q 035640 184 TALADPRWYSTQVTLPDGG-FIVVGGRGAFSYEYI 217 (596)
Q Consensus 184 ~~M~~~R~y~s~~~L~dG~-VyViGG~~~~~~E~y 217 (596)
..+..+. +.+.-+||+ +||.--. ...+..|
T Consensus 182 ~~~~~p~---gia~~~dg~~lyv~d~~-~~~I~~~ 212 (322)
T 2fp8_A 182 KELHVPG---GAEVSADSSFVLVAEFL-SHQIVKY 212 (322)
T ss_dssp EEESCCC---EEEECTTSSEEEEEEGG-GTEEEEE
T ss_pred cCCccCc---ceEECCCCCEEEEEeCC-CCeEEEE
Confidence 2233222 345556776 7776321 2345555
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=27.56 E-value=2e+02 Score=31.95 Aligned_cols=99 Identities=10% Similarity=0.102 Sum_probs=52.3
Q ss_pred CCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCc-------cccceEEeCCCeEEEEcCC
Q 035640 320 TKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPR-------VMGDMVILPTEDILLLNGA 391 (596)
Q Consensus 320 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R-------~~~~avvLpdG~V~vvGG~ 391 (596)
.+++||++... ..+..+|.......|+.. .....- ....++++-+|+||+....
T Consensus 69 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d 130 (689)
T 1yiq_A 69 VDGVMYTTGPF------------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD 130 (689)
T ss_dssp ETTEEEEECGG------------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT
T ss_pred ECCEEEEEcCC------------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC
Confidence 48889887542 135567776445679875 332110 0011245568888875421
Q ss_pred CCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccc-cceEEEEcCCCcEEEecCC
Q 035640 392 KTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRM-YHSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 392 ~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~-yhs~a~LlpDG~Vlv~GG~ 451 (596)
+ .+..+|.+|.+ ..|+.-......+. ....+-++.+|+||+..+.
T Consensus 131 --g------------~l~AlDa~TG~-~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~ 176 (689)
T 1yiq_A 131 --G------------RLEAIDAKTGQ-RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGG 176 (689)
T ss_dssp --S------------EEEEEETTTCC-EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBC
T ss_pred --C------------EEEEEECCCCC-EeeeecCcCCCCCCccccCCcEEECCEEEEEeCC
Confidence 1 46788987762 25875432111111 1111222349999986543
No 237
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=26.55 E-value=1.5e+02 Score=32.09 Aligned_cols=84 Identities=13% Similarity=0.002 Sum_probs=41.0
Q ss_pred CceEEEEeeCCCCceEeecCCCCccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCC
Q 035640 349 QDCGRIDITKPNAVWKKERMPSPRVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGT 428 (596)
Q Consensus 349 ~s~~~id~~~~~~~W~~~~M~~~R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~ 428 (596)
+++..||.. +.+-.. .++....-|..++-|||+.+.+++.+ + .+.+||+.+. +-+.+....
T Consensus 177 ~~V~viD~~--t~~v~~-~i~~g~~p~~v~~SpDGr~lyv~~~d-g------------~V~viD~~~~---t~~~v~~i~ 237 (567)
T 1qks_A 177 GQIALIDGS--TYEIKT-VLDTGYAVHISRLSASGRYLFVIGRD-G------------KVNMIDLWMK---EPTTVAEIK 237 (567)
T ss_dssp TEEEEEETT--TCCEEE-EEECSSCEEEEEECTTSCEEEEEETT-S------------EEEEEETTSS---SCCEEEEEE
T ss_pred CeEEEEECC--CCeEEE-EEeCCCCccceEECCCCCEEEEEcCC-C------------eEEEEECCCC---CCcEeEEEe
Confidence 356677764 333222 22222222345678999865555432 1 5789998632 122233322
Q ss_pred cccccceEEEEc---CCCcEEEecCC
Q 035640 429 IPRMYHSSSVLL---PDGTVLVAGSN 451 (596)
Q Consensus 429 ~~R~yhs~a~Ll---pDG~Vlv~GG~ 451 (596)
....-++.++-- |||+.+.++..
T Consensus 238 ~G~~P~~ia~s~~~~pDGk~l~v~n~ 263 (567)
T 1qks_A 238 IGSEARSIETSKMEGWEDKYAIAGAY 263 (567)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred cCCCCceeEEccccCCCCCEEEEEEc
Confidence 222222344322 69976666654
No 238
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=26.21 E-value=1.8e+02 Score=28.45 Aligned_cols=60 Identities=12% Similarity=-0.074 Sum_probs=32.1
Q ss_pred eEEEEeCCCCCEEeCcCCCc--c--c-cccCeecCCCcEEEEcCC-----C-CCCCeEEEEeCCCCCceeec
Q 035640 122 HSVLFDFETSELTALKLQTD--T--W-CSSGGLTADGDLVSTGGF-----G-GGANTVRYLSTCDGCDWREY 182 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~--~--f-c~~~~~l~dG~ilv~GG~-----~-~g~~~v~~fdP~~t~~W~~~ 182 (596)
...+||+.+++.+.+..... . . -.+..+.+||+.+++.-. . .+...+.++|.. +.+-..+
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~l 335 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK-NGTQHRV 335 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT-TTEEEEE
T ss_pred eEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc-CCceEEe
Confidence 36788999888766543221 0 0 112245678775554211 1 234678899987 6655444
No 239
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=25.30 E-value=3.3e+02 Score=29.40 Aligned_cols=27 Identities=26% Similarity=0.463 Sum_probs=20.1
Q ss_pred EcCCCcEEEEec-ceeEEecCCCCe--EEE
Q 035640 261 LSPDGNLFIFSN-NRSILLDPKANK--VVR 287 (596)
Q Consensus 261 ~~~dG~Ifv~Gg-~~~e~yDp~t~~--w~~ 287 (596)
++.+|+||+... .....+|.++++ |..
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTY 94 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEE
Confidence 346899999887 457889998765 653
No 240
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=24.94 E-value=6.6e+02 Score=26.86 Aligned_cols=58 Identities=17% Similarity=0.188 Sum_probs=31.9
Q ss_pred EEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceEEEEcCCCcEEEecC
Q 035640 378 VILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSSSVLLPDGTVLVAGS 450 (596)
Q Consensus 378 vvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~a~LlpDG~Vlv~GG 450 (596)
..-|||+.+++.+...+ .....+..+|.++. +.+.+.. ....++ ...-|||+.++..+
T Consensus 362 ~~spdg~~l~~~~~~~~--------~~~~~l~~~d~~~~---~~~~l~~---~~~~~~-~~~spdg~~l~~~~ 419 (706)
T 2z3z_A 362 GFDPKGTRLYFESTEAS--------PLERHFYCIDIKGG---KTKDLTP---ESGMHR-TQLSPDGSAIIDIF 419 (706)
T ss_dssp EECTTSSEEEEEESSSC--------TTCBEEEEEETTCC---CCEESCC---SSSEEE-EEECTTSSEEEEEE
T ss_pred EEcCCCCEEEEEecCCC--------CceEEEEEEEcCCC---CceeccC---CCceEE-EEECCCCCEEEEEe
Confidence 34688875554443211 01124566787776 5555442 223444 45579999877664
No 241
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=23.28 E-value=3.2e+02 Score=28.15 Aligned_cols=59 Identities=19% Similarity=0.204 Sum_probs=34.6
Q ss_pred cccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCc-EEEEc
Q 035640 144 CSSGGLTA-DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGG-FIVVG 207 (596)
Q Consensus 144 c~~~~~l~-dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~-VyViG 207 (596)
+.+.++.+ +|+||++-- +...+.+||+. +..-..+.. +....|-...+.-++|+ +|++-
T Consensus 228 p~giavdp~~g~lyv~d~---~~~~V~~~~~~-~~~~~~~~~-~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSW---NAGQVFRYDFT-TQETTPLFT-IQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp CCCEEECTTTCCEEEEET---TTTEEEEEETT-TTEEEEEEE-CSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEEEC---CCCEEEEEECC-CCcEEEEEE-cCCCCcceeEEEcCCCCEEEEEE
Confidence 44455666 799998742 23579999997 554322211 22222333466667887 88874
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=22.66 E-value=2.2e+02 Score=31.42 Aligned_cols=99 Identities=10% Similarity=0.080 Sum_probs=52.4
Q ss_pred CCCEEEEEcCccCCccccccccccccCCCCceEEEEeeCCCCceEee-cCCCCc-------cccceEEeCCCeEEEEcCC
Q 035640 320 TKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSPR-------VMGDMVILPTEDILLLNGA 391 (596)
Q Consensus 320 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~R-------~~~~avvLpdG~V~vvGG~ 391 (596)
.+++||++... ..+..+|.......|+.. ...... ....++.+-+++||+....
T Consensus 76 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d 137 (677)
T 1kb0_A 76 VDGIMYVSASW------------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD 137 (677)
T ss_dssp ETTEEEEECGG------------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT
T ss_pred ECCEEEEECCC------------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC
Confidence 48889887542 235567765444578876 322110 1112345568888875431
Q ss_pred CCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCccccc-ceEEEEcCCCcEEEecCC
Q 035640 392 KTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMY-HSSSVLLPDGTVLVAGSN 451 (596)
Q Consensus 392 ~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~y-hs~a~LlpDG~Vlv~GG~ 451 (596)
. .+.++|.++.+ ..|+.-......+.+ ...+.++.+|+||+..+.
T Consensus 138 g--------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~ 183 (677)
T 1kb0_A 138 G--------------RLIALDAATGK-EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGG 183 (677)
T ss_dssp S--------------EEEEEETTTCC-EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBC
T ss_pred C--------------EEEEEECCCCC-EEeeecCCcCcCcCcccccCcEEECCEEEEEecc
Confidence 1 46788988762 258753320111111 111223348999987654
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=22.51 E-value=7.8e+02 Score=26.86 Aligned_cols=121 Identities=11% Similarity=0.134 Sum_probs=60.9
Q ss_pred cCCCcEEEEec-ceeEEecCCCCe--EEEeeccccCCCC---CC--CCCceEEeccccccccccccCCCEEEEEcCccCC
Q 035640 262 SPDGNLFIFSN-NRSILLDPKANK--VVREFPILTGGSR---NY--PASAMSVLLPLKLRANNATATKAKVLVCGGAQWD 333 (596)
Q Consensus 262 ~~dG~Ifv~Gg-~~~e~yDp~t~~--w~~~lp~mp~~~R---~~--p~~g~av~lpl~~~~~~~~~~~gkI~v~GG~~~~ 333 (596)
+.+|+||+... ..+..+|..+++ |..... .+.... .+ ...+.+ +.+++||+... +
T Consensus 75 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~a-------------~~~~~v~v~~~-d-- 137 (677)
T 1kb0_A 75 VVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQ-IDRSTGFKGCCDVVNRGVA-------------LWKGKVYVGAW-D-- 137 (677)
T ss_dssp EETTEEEEECGGGCEEEEETTTTEEEEEECCC-CCGGGGGGSSSCSCCCCCE-------------EETTEEEEECT-T--
T ss_pred EECCEEEEECCCCeEEEEECCCCcEEEEEcCC-CCccccccccccCCCCCce-------------EECCEEEEEcC-C--
Confidence 45889998876 457789988776 543221 110000 00 001122 14788887533 1
Q ss_pred ccccccccccccCCCCceEEEEeeCCCCceEee-cCCCC--ccccceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEE
Q 035640 334 SFYFSETKKQFFPALQDCGRIDITKPNAVWKKE-RMPSP--RVMGDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPAL 410 (596)
Q Consensus 334 ~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~M~~~--R~~~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~ 410 (596)
..+..+|.......|+.. .-... .....+.++.+|+||+..+... + ..--.+..
T Consensus 138 ---------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~----~----~~~g~v~a 194 (677)
T 1kb0_A 138 ---------------GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE----Y----GVRGYITA 194 (677)
T ss_dssp ---------------SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT----T----CCBCEEEE
T ss_pred ---------------CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc----c----CCCCEEEE
Confidence 234567765445578876 31111 1112234455888877543210 0 01125789
Q ss_pred EcCCCCCCCceEE
Q 035640 411 YTPRGPSRQRFKE 423 (596)
Q Consensus 411 YDP~t~~g~~Wt~ 423 (596)
||+++.+ ..|+.
T Consensus 195 ~D~~tG~-~~W~~ 206 (677)
T 1kb0_A 195 YDAETGE-RKWRW 206 (677)
T ss_dssp EETTTCC-EEEEE
T ss_pred EECCCCc-EEEEe
Confidence 9998862 25765
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=22.23 E-value=4.9e+02 Score=24.37 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=25.7
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCceeecCcCCCCcccccEEEEccCCcEEEE
Q 035640 152 DGDLVSTGGFGGGANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLPDGGFIVV 206 (596)
Q Consensus 152 dG~ilv~GG~~~g~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyVi 206 (596)
+|+|++... . ..+..||+.....|..... ... ..+.+.-.+|.||+.
T Consensus 107 ~~~l~v~t~-~---~~l~~~d~~g~~~~~~~~~---~~~-~~~~~~~~~g~l~vg 153 (330)
T 3hxj_A 107 EDILYVTSM-D---GHLYAINTDGTEKWRFKTK---KAI-YATPIVSEDGTIYVG 153 (330)
T ss_dssp TTEEEEECT-T---SEEEEECTTSCEEEEEECS---SCC-CSCCEECTTSCEEEE
T ss_pred CCEEEEEec-C---CEEEEEcCCCCEEEEEcCC---Cce-eeeeEEcCCCEEEEE
Confidence 788777432 1 3588899862345654322 111 223344447888874
No 245
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=22.21 E-value=1.2e+02 Score=30.95 Aligned_cols=67 Identities=21% Similarity=0.241 Sum_probs=39.6
Q ss_pred cceEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCc-----ccccceEEEEcC-------C
Q 035640 375 GDMVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTI-----PRMYHSSSVLLP-------D 442 (596)
Q Consensus 375 ~~avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~-----~R~yhs~a~Llp-------D 442 (596)
...+.|+||+||+.-=..... ... ....+|. .+|.|++|+.+..... .-.+|-+...+| +
T Consensus 26 p~~v~L~dG~lLa~~~~~~~~-----~~~--~~~~v~r-S~DgG~TW~~~~~v~~~~~g~~~~~~P~l~~lp~~v~~~~~ 97 (355)
T 3a72_A 26 PRNEQLPNGDLLATWENYSPE-----PPA--VYFPIYR-SKDHGKTWNEISRVHDTVNGYGLRYQPFLYSLPERVGSFKK 97 (355)
T ss_dssp EEEEECTTSCEEEEEEECCCS-----SSC--CCEEEEE-ESSTTSCCEEEEEECCTTTSSCEEEEEEEEECSSCBTTBCT
T ss_pred ceEEEcCCCCEEEEEEeecCC-----CCC--ceEEEEE-EcCCCcCcCCCcccCCCcCCcccccCCcEEecCcccccCCC
Confidence 346789999998762111000 000 1234554 5677899998755432 223455666677 9
Q ss_pred CcEEEec
Q 035640 443 GTVLVAG 449 (596)
Q Consensus 443 G~Vlv~G 449 (596)
|+|+.+|
T Consensus 98 G~ll~~~ 104 (355)
T 3a72_A 98 GTLLLAG 104 (355)
T ss_dssp TCEEEEE
T ss_pred CcEEEEE
Confidence 9999996
No 246
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=21.79 E-value=2.9e+02 Score=27.03 Aligned_cols=49 Identities=8% Similarity=-0.070 Sum_probs=25.1
Q ss_pred eEEEEeCC-CCCEEeCcCC---C-ccccccCeecCCCcEEEEcCCCCCCCeEEEEe
Q 035640 122 HSVLFDFE-TSELTALKLQ---T-DTWCSSGGLTADGDLVSTGGFGGGANTVRYLS 172 (596)
Q Consensus 122 ~~~~yDp~-t~~w~~l~~~---~-~~fc~~~~~l~dG~ilv~GG~~~g~~~v~~fd 172 (596)
...+||.. +++.+.+... . .....+.++.+||+.+.+....+ ..+.+|+
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--~~v~v~~ 221 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG--NRICEYV 221 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEE
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC--CeEEEEE
Confidence 36678877 6666543211 1 11122335678997655544322 4566654
No 247
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=21.32 E-value=1.4e+02 Score=29.42 Aligned_cols=58 Identities=14% Similarity=0.122 Sum_probs=37.1
Q ss_pred eEEeCCCeEEEEcCCCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCCCcccccceE-EEEcCCCcEEEecCCC
Q 035640 377 MVILPTEDILLLNGAKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAGTIPRMYHSS-SVLLPDGTVLVAGSNT 452 (596)
Q Consensus 377 avvLpdG~V~vvGG~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~~~~R~yhs~-a~LlpDG~Vlv~GG~~ 452 (596)
.++-++|+||+..-.. ..+.+|||++. ++..+...+ +..+-. ..+-+||++||+....
T Consensus 253 ia~d~~G~l~va~~~~-------------~~V~~~d~~~G---~~~~~~~~~--~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAH-------------SAIGVITSADR---AYKLLVTDE--KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTCCEEEEEGGG-------------TEEEEEETTTT---EEEEEEECG--GGSCEEEEEECTTSCEEEEECCG
T ss_pred EEECCCCCEEEEccCC-------------CeEEEEECCCC---CEEEEEECC--ceecCCeeEECCCCcEEEEeCcc
Confidence 3445789999975322 26789999666 676665432 333333 3344899999998654
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=21.11 E-value=1.9e+02 Score=31.21 Aligned_cols=98 Identities=9% Similarity=0.141 Sum_probs=51.9
Q ss_pred CCCEEEEEcCccCCccccccccccccCCCCceEEEEe-eCCCCceEee-cCCCC-c------cccceEEeCCCeEEEEcC
Q 035640 320 TKAKVLVCGGAQWDSFYFSETKKQFFPALQDCGRIDI-TKPNAVWKKE-RMPSP-R------VMGDMVILPTEDILLLNG 390 (596)
Q Consensus 320 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~id~-~~~~~~W~~~-~M~~~-R------~~~~avvLpdG~V~vvGG 390 (596)
.+++||+....+ ..+..+|. ......|+.. ..... + ....++++-+|+||+...
T Consensus 61 ~~g~vyv~~~~~-----------------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~ 123 (571)
T 2ad6_A 61 IGDMMYVHSAFP-----------------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA 123 (571)
T ss_dssp ETTEEEEECSTT-----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT
T ss_pred ECCEEEEEeCCC-----------------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC
Confidence 488999876521 23566887 5445679876 33211 0 001124556899988643
Q ss_pred CCCCCCCCCCCCCCCcccEEEcCCCCCCCceEEecCC-CcccccceEEEEcCCCcEEEecC
Q 035640 391 AKTGTSGWNDAEDPNLVPALYTPRGPSRQRFKELAAG-TIPRMYHSSSVLLPDGTVLVAGS 450 (596)
Q Consensus 391 ~~~g~~g~~~~~~~~~s~e~YDP~t~~g~~Wt~~a~~-~~~R~yhs~a~LlpDG~Vlv~GG 450 (596)
.. .+.++|+++.+ ..|+.-..- .......+. -++.+|+||+..+
T Consensus 124 dg--------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~-P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 NG--------------HLLALDAKTGK-INWEVEVCDPKVGSTLTQA-PFVAKDTVLMGCS 168 (571)
T ss_dssp TS--------------EEEEEETTTCC-EEEEEECCCGGGTCBCCSC-CEEETTEEEEECB
T ss_pred CC--------------EEEEEECCCCC-EEEEecCCCCCccceeccC-CEEECCEEEEEec
Confidence 21 45788987752 258643221 111011111 1223899988765
No 249
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=21.10 E-value=8.4e+02 Score=26.67 Aligned_cols=25 Identities=16% Similarity=0.177 Sum_probs=17.9
Q ss_pred cCCCcEEEEecc-eeEEecCCCCe--EE
Q 035640 262 SPDGNLFIFSNN-RSILLDPKANK--VV 286 (596)
Q Consensus 262 ~~dG~Ifv~Gg~-~~e~yDp~t~~--w~ 286 (596)
+.+|+||+.... ....+|..+++ |.
T Consensus 68 v~~g~vyv~~~~~~v~AlD~~tG~~~W~ 95 (689)
T 1yiq_A 68 VVDGVMYTTGPFSVVYALDARDGRLIWK 95 (689)
T ss_dssp EETTEEEEECGGGCEEEEETTTCCEEEE
T ss_pred EECCEEEEEcCCCeEEEEECCCCceeEE
Confidence 458889987653 47788988765 64
No 250
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=20.47 E-value=7.2e+02 Score=25.65 Aligned_cols=25 Identities=8% Similarity=0.294 Sum_probs=16.8
Q ss_pred cEEEEec------ceeEEecCCCCeEEEeec
Q 035640 266 NLFIFSN------NRSILLDPKANKVVREFP 290 (596)
Q Consensus 266 ~Ifv~Gg------~~~e~yDp~t~~w~~~lp 290 (596)
++|+.-. ..+.++|+.+++....++
T Consensus 86 ~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~ 116 (426)
T 3c75_H 86 RVYIQDPAHFAAITQQFVIDGSTGRILGMTD 116 (426)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCcCCCCCeEEEEECCCCEEEEEEE
Confidence 4666543 356789999998765553
No 251
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=20.17 E-value=5.3e+02 Score=27.66 Aligned_cols=83 Identities=12% Similarity=0.074 Sum_probs=45.9
Q ss_pred eEEEEeCCCCCEEeCcCCCccccccCeecCCCcEEEEcCCCCC--CCeEEEEeCCCCCceeecCcCCCCcccccEEEEcc
Q 035640 122 HSVLFDFETSELTALKLQTDTWCSSGGLTADGDLVSTGGFGGG--ANTVRYLSTCDGCDWREYPTALADPRWYSTQVTLP 199 (596)
Q Consensus 122 ~~~~yDp~t~~w~~l~~~~~~fc~~~~~l~dG~ilv~GG~~~g--~~~v~~fdP~~t~~W~~~~~~M~~~R~y~s~~~L~ 199 (596)
....+|...+..+.+..-.........+.+||+.+++.+..++ ...+..+|.. +.+...+ .......+++.-+
T Consensus 336 ~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~-~~~~~~l----~~~~~~~~~~~sp 410 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK-GGKTKDL----TPESGMHRTQLSP 410 (706)
T ss_dssp EEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT-CCCCEES----CCSSSEEEEEECT
T ss_pred EEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC-CCCceec----cCCCceEEEEECC
Confidence 4455666666666664322111111345678875555444332 3578888876 5554443 2233344566667
Q ss_pred CCcEEEEcCC
Q 035640 200 DGGFIVVGGR 209 (596)
Q Consensus 200 dG~VyViGG~ 209 (596)
||+.+++...
T Consensus 411 dg~~l~~~~~ 420 (706)
T 2z3z_A 411 DGSAIIDIFQ 420 (706)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEec
Confidence 9988777644
Done!