BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035641
(314 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 171/337 (50%), Positives = 223/337 (66%), Gaps = 29/337 (8%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSE--PEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
MEK+LV LF AKKAADA+ ++S PEV RC D+LK L+ F VT ++LVSTQVGK L
Sbjct: 1 MEKELVELFDKAKKAADASLNDDKSSSGPEVSRCVDSLKQLRKFKVTSEILVSTQVGKKL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS------------KLSVDEKF 106
R L KHP +K++ AS+LL WK KIV+ + K+N + K+S E
Sbjct: 61 RPLAKHPKDKIRAVASDLLETWK-KIVI--DETMRKKNATVKVEKLQKTSMVKVSTSETV 117
Query: 107 QKQTSDSNAVKSGCSTAKEKKATASIRKPSHAD----------QAKDSMRDKIRKDLEKA 156
+ + D + T KE+ T+S++KPS A + D++RDKIR+ L +A
Sbjct: 118 KVEKMDQDKTVKVAQTCKEEIQTSSVKKPSQAPTGPPKLKTLVKCNDALRDKIRELLAEA 177
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
LS+VASEA DE+I D V+A DP +VA SVE MFEKL A+K K+RSIMFN+ D+
Sbjct: 178 LSKVASEA--DEDIRDEVEACDPIRVAVSVESAMFEKLGRSNGAQKMKYRSIMFNIKDQN 235
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
NPDLRR+VL+G+V P+RL TM PEE+AS++R++EN +IK K +F CE K + TTDQFK
Sbjct: 236 NPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKRENNQIKEKALFDCERGGKAEATTDQFK 295
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C CG+ C+Y+QMQTRSADEPMTTYVTC CN WK
Sbjct: 296 CGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWK 332
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 170/359 (47%), Positives = 221/359 (61%), Gaps = 55/359 (15%)
Query: 1 MEKKLVTLFGAAKKAADAAAA--TNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
ME + V LF AKKAADA+ + S PEV RC D+LK L+ F VT +LLVSTQVGK L
Sbjct: 1 MEMEFVELFDEAKKAADASLNDDVSSSGPEVTRCVDSLKQLRKFKVTSELLVSTQVGKKL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEK--FQKQTSDSNAV 116
R L KHP EK++ AS+LL +WK+ ++ K+NGS +D K + + S S V
Sbjct: 61 RPLAKHPKEKIRAVASDLLEMWKKMVI----DETRKKNGS---IDSKSSVKAEVSKSETV 113
Query: 117 K---------------SGCSTAKEKKA-----------------TASIRKPSHAD----- 139
K S T K +K T+S+++PS +
Sbjct: 114 KVEKLRKTSVVKVERASTSETVKVEKMDQDKTVKVEKMSKQEIQTSSVKQPSQSPIGPPK 173
Query: 140 -----QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKL 194
+ D++RDKIR+ L +ALS+VASEA DE+I D V+A DP +VA SVE +MFEKL
Sbjct: 174 LKTLVKCNDALRDKIRELLAEALSKVASEA--DEDIRDEVEACDPIRVAVSVESMMFEKL 231
Query: 195 RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEI 254
A+K K+RSIMFN+ D+ NPD RR+VL+GEV PERL TM PEE+AS++R++EN +I
Sbjct: 232 GRSNGAQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQRKRENNQI 291
Query: 255 KAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K K +F CE + + TTDQFKC C + C+Y+QMQTRSADEPMTTYVTC CN WK
Sbjct: 292 KEKVLFDCERSGQAQATTDQFKCGRCRQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWK 350
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/325 (50%), Positives = 215/325 (66%), Gaps = 17/325 (5%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSE--PEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
ME++LV LF +AKKAADAAA S PEV RC DALK L++FPVTY+ L STQVGK L
Sbjct: 1 MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKS 118
RHL KHP K+Q+ AS+LL +WK+ ++ + NK+NG + ++ S V+
Sbjct: 61 RHLTKHPKGKIQSLASDLLEMWKKVVI---DETRNKKNGGLDNNGSAKAEKASKVETVEK 117
Query: 119 GCSTAKEKKATASIRKPSHADQA----------KDSMRDKIRKDLEKALSRVASEAADDE 168
E+K +S++KP A D++RDK+R+ L +AL +VASEA DE
Sbjct: 118 RVENVDERKQFSSVKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEA--DE 175
Query: 169 EITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+I D V A DP +VA SVE VMFEK+ +K K+RSIMFN+ D NPDLRR+VL+GE
Sbjct: 176 DIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGE 235
Query: 229 VTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYH 288
V P+RL M+PEE+AS++R++EN +IK K +F CE K TTDQFKC CG+ +Y+
Sbjct: 236 VKPDRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYY 295
Query: 289 QMQTRSADEPMTTYVTCAECNKRWK 313
Q+QTRSADEPMTT+VTC CN WK
Sbjct: 296 QLQTRSADEPMTTFVTCVNCNNHWK 320
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 175/343 (51%), Positives = 221/343 (64%), Gaps = 33/343 (9%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSE--PEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
ME++LV LF AAKKAADAAA+ S PEV RC DALK L+ FP++YD+LVS+QVGK L
Sbjct: 1 MERELVELFEAAKKAADAAASDGVSSNGPEVVRCVDALKQLKIFPISYDILVSSQVGKRL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIVLGKET---NGNKRNGSKLSVD---------EKF 106
R L KHP EK+Q AS+LL +WK KIV+ + T NG N S + + EK
Sbjct: 61 RPLTKHPREKIQTVASDLLEMWK-KIVIDETTRKKNGTVDNKSSVKAEVSKVETIKVEKV 119
Query: 107 QKQTS------DSNAVKSGCSTAKEKKATASIRKPSHAD----------QAKDSMRDKIR 150
QK ++ D ++EK+ ++KPS A + D++RDKIR
Sbjct: 120 QKASTVKVEKIDRERTVKVEKKSEEKQQAIDVKKPSQASVTPPKLTAIVKCNDALRDKIR 179
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
+ L +ALS+V SEA +D D + DP +VA SVE MFEK+ A+K K+RSIMF
Sbjct: 180 ELLVEALSKVVSEANEDGR--DEISKCDPIRVAVSVESAMFEKMGRSNGAQKFKYRSIMF 237
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D NPDLRR+VL+GEV PERL +MTPEE+AS ER++E +IK K +F CE K
Sbjct: 238 NLKDPNNPDLRRKVLLGEVKPERLISMTPEEMASKERQEEINQIKEKALFDCERGGPAKA 297
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TTDQFKCS CG+ C+Y+QMQTRSADEPMTTYVTC CNK WK
Sbjct: 298 TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNKHWK 340
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 172/367 (46%), Positives = 220/367 (59%), Gaps = 56/367 (15%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSE--PEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
ME++LV LF +AKKAADAAA S PEV RC DALK L++FPVTY+ L STQVGK L
Sbjct: 1 MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIV---LGKETNGNKRNGS-KLSVD----------- 103
RHL KHP K+Q+ AS+LL +WK+ ++ K+ G NGS K V
Sbjct: 61 RHLTKHPKGKIQSLASDLLEMWKKVVIDETRNKKNGGLDNNGSAKAEVSKTETVKVEMAH 120
Query: 104 ------------------EKFQKQTSDSNAVKSGCSTAK---------EKKATASIRKPS 136
EKF + +S S T K E+K +S++KP
Sbjct: 121 KAGGVKVEKASKVETVKIEKFDRGSSTKPGSVSRSETIKVEKRVENVDERKQFSSVKKPP 180
Query: 137 HADQA----------KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASV 186
A D++RDK+R+ L +AL +VASEA DE+I D V A DP +VA SV
Sbjct: 181 QASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEA--DEDIKDEVNACDPIRVAVSV 238
Query: 187 ERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
E VMFEK+ +K K+RSIMFN+ D NPDLRR+VL+GEV P+RL M+PEE+AS++
Sbjct: 239 ESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQ 298
Query: 247 RRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCA 306
R++EN +IK K +F CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+VTC
Sbjct: 299 RQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 358
Query: 307 ECNKRWK 313
CN WK
Sbjct: 359 NCNNHWK 365
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/327 (47%), Positives = 209/327 (63%), Gaps = 21/327 (6%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
+EK+L+ LF KKAAD A +E E QRC DALK L+A PVT +LVSTQVGK LR+
Sbjct: 7 VEKELLELFEKVKKAADKAIT---NEAEEQRCLDALKALRAVPVTMGVLVSTQVGKRLRN 63
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVK--- 117
L KHP E + A++LL WK+ V+ ET N N + S D++ + + NAVK
Sbjct: 64 LTKHPQENICTLATDLLDSWKK--VVTSETLANSGNKATQSEDKQSKSIKVEDNAVKRES 121
Query: 118 --------SGCSTAKEKKATASIRKP---SHADQAKDSMRDKIRKDLEKALSRVASEAAD 166
++ K ++S P + + D++RDKIR+ + +A S+V +EA
Sbjct: 122 VKVEKKPKEEEASITNKNVSSSSNGPPKLTSMIKCNDAVRDKIREIIYEAFSKVVNEAEG 181
Query: 167 DEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLI 226
+ + R+ A DP +VA +VE +MFEKL A+K K+RSI+FN+ D NPDLRRRVL+
Sbjct: 182 ENMV--RINACDPVRVAVTVETLMFEKLGRSNGAQKLKYRSIIFNLKDANNPDLRRRVLL 239
Query: 227 GEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCS 286
GE+ PE+L MT EE+ASD+R+ EN++IK K +F+CE K K TTDQFKC CG+ C+
Sbjct: 240 GEIKPEKLIVMTAEEMASDQRKLENKQIKDKALFECERGIKPKATTDQFKCGKCGQRKCT 299
Query: 287 YHQMQTRSADEPMTTYVTCAECNKRWK 313
Y+Q+QTRSADEPMTT+VTC CN WK
Sbjct: 300 YYQLQTRSADEPMTTFVTCVNCNNHWK 326
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 165/369 (44%), Positives = 214/369 (57%), Gaps = 70/369 (18%)
Query: 5 LVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKH 64
LV L+ AAKKAADA+ +T+ S E RC DAL+ L+ FPV Y +LV+TQVGK L+ L KH
Sbjct: 9 LVELYEAAKKAADASTSTDNSPSEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKH 68
Query: 65 PCEKVQNAASELLHIWKQKIVLGKETNGNKR----------------------------- 95
P E ++ A +L+ IWK I+ KET+ NK
Sbjct: 69 PRENIRTFAVDLIAIWKDVII--KETSKNKNGASDSKVESTNGERAKAGKLQKSPSVKVE 126
Query: 96 ------------NGS-KLS--------VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRK 134
NGS KLS VD K +K SN AKE+K ++ +K
Sbjct: 127 KGESAKVEKVNGNGSSKLSSGNVRAQNVDVKIEKTDRTSNI------KAKEEKPVSAAKK 180
Query: 135 PSHADQA----------KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAA 184
S + A DS RDKIR+ L AL++V EA DE++ D V A DP +VA
Sbjct: 181 ISSSAAAPPKLKTMIKSNDSARDKIRELLRDALAKVFEEA--DEDMMDEVNACDPIRVAV 238
Query: 185 SVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
+VE V+FE P A+K K+RS+MFN+ D+KNPD RR+VL+G V P+RLA M+ E+AS
Sbjct: 239 TVESVLFENWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMAS 298
Query: 245 DERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVT 304
++R+QENE+I+ K +F CE + K TTDQFKC CG+ +Y+QMQTRSADEPMTTYVT
Sbjct: 299 EQRKQENEKIEQKALFDCERGLQPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVT 358
Query: 305 CAECNKRWK 313
C CN RWK
Sbjct: 359 CVNCNNRWK 367
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/371 (45%), Positives = 211/371 (56%), Gaps = 62/371 (16%)
Query: 1 MEKKLVTLF-GAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLR 59
ME +LV LF A K A AAA +N E RC DAL+ L+ FPVTY +LVSTQVGK LR
Sbjct: 1 MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
Query: 60 HLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVD--------------EK 105
HL KHP +K+Q AS+L+ +WK+ ++ KETN NK+NG+ S D EK
Sbjct: 61 HLTKHPKKKIQEHASDLIEMWKEIVI--KETNKNKKNGNASSKDSPKIGSPSAESVKVEK 118
Query: 106 FQKQTS------------DSNAVKSGC---------------------STAKEKKATASI 132
FQK +S D N S S K ++
Sbjct: 119 FQKSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVKEE 178
Query: 133 RKPSHADQA----------KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
+KPS A KD+ RDKIR+ L +A S+V EA DEE D V A DP +V
Sbjct: 179 KKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEA--DEEFMDEVNASDPIRV 236
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A SVE VMFE A+K K+RSIMFN+ D KNPD RR+VL+G + PER+ M+ ++
Sbjct: 237 AVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADM 296
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
ASD+R++ENEEI K +F CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+
Sbjct: 297 ASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 356
Query: 303 VTCAECNKRWK 313
VTC CN WK
Sbjct: 357 VTCVNCNNHWK 367
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/382 (44%), Positives = 221/382 (57%), Gaps = 72/382 (18%)
Query: 1 MEKKLVTLFGAAKKAADAAA--ATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
ME +L+ LF AKKAADAAA S PE+ +C DALK L+ FPVTYD LV+TQVGK L
Sbjct: 1 METELIELFEGAKKAADAAALDGVTSSGPEISQCLDALKQLKKFPVTYDTLVATQVGKKL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIV--------LGKETNGNKRNGSKLS-VDEKFQKQ 109
R L KHP E++++ A++LL IWK+ ++ +G TNG K +K +D K ++
Sbjct: 61 RSLSKHPVEEIKSVATDLLEIWKKVVIEETSKAKKIG-STNGVKSETAKDGKIDRKDVER 119
Query: 110 TSD--------------------------------------SNAVKSGC------STAKE 125
TS+ N V +G T K+
Sbjct: 120 TSNPAPVKVQKLQRGDSAKSIKVEKKEPDNKVGAKIERKEQDNKVNTGAKLDHRGQTVKD 179
Query: 126 KKAT----ASIRKPSHADQA----------KDSMRDKIRKDLEKALSRVASEAADDEEIT 171
+K + +S + P+ + A D +RDKIR+ L +ALSRV E+ DE
Sbjct: 180 EKVSKENQSSTKAPAKSPNAPPKLTSMLKCNDPVRDKIREMLVEALSRVHGES--DEYDR 237
Query: 172 DRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTP 231
++V DP +VA SVE MFEKL AEK K+RSIMFN+ D NPDLRRRVL GEV P
Sbjct: 238 EKVNGCDPFRVAVSVESHMFEKLGRSTGAEKAKYRSIMFNLRDSNNPDLRRRVLTGEVPP 297
Query: 232 ERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQ 291
E+L T++ EE+ASD+R+QEN +IK KF+F CE K +TDQFKC CG+ C+Y+QMQ
Sbjct: 298 EKLITLSAEEMASDKRKQENNQIKEKFLFNCEQGPAPKASTDQFKCGRCGQRKCTYYQMQ 357
Query: 292 TRSADEPMTTYVTCAECNKRWK 313
TRSADEPMTTYVTC CN WK
Sbjct: 358 TRSADEPMTTYVTCVNCNNHWK 379
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/332 (49%), Positives = 216/332 (65%), Gaps = 27/332 (8%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNR-SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLR 59
+E +LV LF A+KAAD AA + E E QRC DALK L++ PVT +LVSTQVGK LR
Sbjct: 6 VENELVELFQKAQKAADKAAKDDGCEEAEEQRCLDALKALRSVPVTMGILVSTQVGKRLR 65
Query: 60 HLKKHPCEKVQNAASELLHIWKQKIVLGKET---NGNKRNGSKLSVDEKFQKQTSDSNAV 116
++ KHP EK++ A+ELL WK+ V+ ET NGNK +K+ D++F+ + NA
Sbjct: 66 NVTKHPREKIRTLAAELLDAWKK--VVTSETLPDNGNK--ATKVE-DKQFKSVKVEVNAS 120
Query: 117 KSGCSTAKEKK------------ATASIRKP---SHADQAKDSMRDKIRKDLEKALSRVA 161
K G S EKK A++S P + + D++RDK R+ L +A S+V
Sbjct: 121 K-GESVKVEKKPKVETESIGSKKASSSSNGPPKLTSMIKCNDALRDKFREILYEAFSKVV 179
Query: 162 SEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLR 221
+EA ++ RV A DP ++A SVE VMFEKL A+K K+RSIMFN+ D NPDLR
Sbjct: 180 NEAEGED--LARVNACDPVRIAVSVETVMFEKLGRSNGAQKFKYRSIMFNLKDGNNPDLR 237
Query: 222 RRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCG 281
RRVL+G++ PE+L MT EE+ASD R+ EN++IK K +F+CE K K TTDQFKC CG
Sbjct: 238 RRVLLGQIKPEKLIVMTAEEMASDNRKLENKQIKDKALFECERGMKPKATTDQFKCGKCG 297
Query: 282 KSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ C+Y+Q+QTRSADEPMTT+VTC CN WK
Sbjct: 298 QRMCTYYQLQTRSADEPMTTFVTCVNCNNHWK 329
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/325 (45%), Positives = 199/325 (61%), Gaps = 17/325 (5%)
Query: 2 EKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHL 61
EK+LV LF AKKAA A + E RC DAL L+AFPVT LLVSTQVGK LR L
Sbjct: 8 EKELVELFEVAKKAAGATELEEKGGAEESRCLDALAQLKAFPVTAQLLVSTQVGKLLRPL 67
Query: 62 KKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNG---SKLSVDEKFQKQTSDSNAVKS 118
KH + +Q+ AS++ +WK+K + ++T+ K+NG K SV + + +K
Sbjct: 68 TKHSRKNIQDLASDVFPLWKKKFL--EQTSSTKKNGMLEDKTSVKSTENIKIEKTRTIKV 125
Query: 119 GCST--------AKEKKATASIRKPSHADQAK--DSMRDKIRKDLEKALSRVASEAADDE 168
T AK ++ +R P K D RD IR+ L +AL +V+SEA +E
Sbjct: 126 EAKTEHKGEPRSAKVVESECLLRSPRMKSIPKCNDPSRDNIREQLYEALCKVSSEA--NE 183
Query: 169 EITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
EI V A D VA +VE +F P +++ K+RS++FN D KNPD RR+VL+G+
Sbjct: 184 EIQKEVNACDAIGVAVAVESALFSNWGPSNGSDRIKYRSLIFNTRDAKNPDFRRKVLLGQ 243
Query: 229 VTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYH 288
V PER+A ++ EE+ASDERR++N+EIK K + C++ K TTDQFKC CG+ SY+
Sbjct: 244 VKPERIAELSSEEMASDERRKKNKEIKEKALLVCQLAGAPKATTDQFKCGRCGQRKTSYY 303
Query: 289 QMQTRSADEPMTTYVTCAECNKRWK 313
QMQTRSADEPMTTYVTC C+ RWK
Sbjct: 304 QMQTRSADEPMTTYVTCVNCSNRWK 328
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 160/371 (43%), Positives = 209/371 (56%), Gaps = 63/371 (16%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
MEK+LV L+ AAKKAADAA + + E RC DAL+ L+ FPV Y +LV+TQVGK L+
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGKHEE-SRCIDALEQLKKFPVNYKILVNTQVGKHLKV 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE---------KFQKQTS 111
L KHP K++ A +L+ IWK I+ KET+ NK GS V+ K QK S
Sbjct: 60 LTKHPRLKIKAFAIDLIEIWKGIII--KETSKNKNGGSDSKVESANGEKSKAGKMQKSPS 117
Query: 112 --------------DSNAVKSGCS-------------------------TAKEKKATASI 132
D N S AKE+K +
Sbjct: 118 VKVEKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSGA 177
Query: 133 RKPSHADQA----------KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
+K S + A D+ RDKIR+ L +ALS+V EA DE++ D V DP +V
Sbjct: 178 KKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEA--DEDLVDVVNNSDPIRV 235
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A +VE V+FEK P A+K K+RS+MFN+ D NPD RR+VL+G + PE+L M+ E+
Sbjct: 236 AVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEM 295
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
AS++R+QE ++I K +F+CE K TTDQFKC CG+ +Y+QMQTRSADEPMTTY
Sbjct: 296 ASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTY 355
Query: 303 VTCAECNKRWK 313
VTC CN RWK
Sbjct: 356 VTCVVCNNRWK 366
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/371 (42%), Positives = 208/371 (56%), Gaps = 63/371 (16%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
MEK+LV L+ AAKKAADAA + + E RC DA + L+ FPV Y +LV+TQVGK L+
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGKHEE-SRCIDAFEQLKKFPVNYKILVNTQVGKHLKV 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE---------KFQKQTS 111
L KHP K++ A +L+ IWK I+ KET+ NK GS V+ K QK S
Sbjct: 60 LTKHPRLKIKAFAIDLIEIWKGIII--KETSKNKNGGSDSKVESANGEKSKAGKMQKSPS 117
Query: 112 --------------DSNAVKSGCS-------------------------TAKEKKATASI 132
D N S AKE+K +
Sbjct: 118 VKVEKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSGA 177
Query: 133 RKPSHADQA----------KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
+K S + A D+ RDKIR+ L +ALS+V EA DE++ D V DP +V
Sbjct: 178 KKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEA--DEDLVDVVNNSDPIRV 235
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A +VE V+FEK P A+K K+RS+MFN+ D NPD RR+VL+G + PE+L M+ E+
Sbjct: 236 AVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEM 295
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
AS++R+QE ++I K +F+CE K TTDQFKC CG+ +Y+QMQTRSADEPMTT+
Sbjct: 296 ASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTH 355
Query: 303 VTCAECNKRWK 313
VTC CN RWK
Sbjct: 356 VTCVVCNNRWK 366
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 210/370 (56%), Gaps = 62/370 (16%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
MEK+LV L+ AAKKAADAA + + E E RC DAL+ L+ FPV Y +LV+TQVGK L+
Sbjct: 1 MEKELVELYEAAKKAADAAISGD-GEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKV 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK-------------------------- 94
L KHP +K+++ A +L+ IWK I+ KET+ NK
Sbjct: 60 LTKHPRQKIKSFAIDLIEIWKGIII--KETSKNKNGGSDSKDESANREKSKAGKMQKSPS 117
Query: 95 ---------------RNGSKLSVDEKFQKQTSD------SNAVKSGCSTAKEKKATASIR 133
RNG+ S E +K +D A E+K + +
Sbjct: 118 VKIEKGETVKVEKIERNGTSKSSFENMKKVQNDVKNERTDRAASVKMEKIAEEKPISGAK 177
Query: 134 KPSHADQA----------KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVA 183
K S + A D+ RDKIR+ L +ALS+V EA DE++ V DP +VA
Sbjct: 178 KMSSSSTAPPKLKTMIKSNDATRDKIREILHEALSKVTREA--DEDLVAVVNDSDPIRVA 235
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+VE V+FEK P A+K K+RS+MFN+ D NPD RR+VL+G V PE+L M+ E+A
Sbjct: 236 VTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMA 295
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYV 303
S++R+QE ++I K +F+CE + K TTDQFKC CG+ +Y+QMQTRSADEPMTTYV
Sbjct: 296 SEQRKQEYQKITEKALFECERGGQPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYV 355
Query: 304 TCAECNKRWK 313
TC CN RWK
Sbjct: 356 TCCVCNNRWK 365
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 204/377 (54%), Gaps = 65/377 (17%)
Query: 1 MEKKLVTLF--GAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
ME L+ LF A A S PEV +C DALK L+ FPVTYD LV+TQVGK L
Sbjct: 1 MESDLIGLFEGAKKAADAAALDGVASSGPEVSQCLDALKQLKKFPVTYDTLVATQVGKKL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS---------KLSVDE----- 104
R L KHP E++++ A++LL IWK K+V+G+ K G+ K+ VD+
Sbjct: 61 RSLAKHPIEEIKSVATDLLEIWK-KVVIGETAKAKKTEGTNGCKEAKVNKMDVDKPSNPA 119
Query: 105 --KFQK-QTSDS-NAVK--------SGCSTAK--EKKATASIRKPSHADQAKDSMRD-KI 149
K QK Q DS ++K G + K K+ + + D +++D K+
Sbjct: 120 PVKVQKLQRGDSAKSIKVERKEPDNKGVTGVKIERKELDNKVTNGTKIDYRGQAVKDEKV 179
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPK----------------------------- 180
KD + ++ A ++T +K DP
Sbjct: 180 SKDNQSSMKAPAKAPNAPPKLTAMLKCNDPVRDKIRELLVDALCRVAGEADDYERKSVNA 239
Query: 181 ----QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+VA SVE +MFEKL A+K K+RSIMFN+ D NPDLRRRVL GE++PE+L T
Sbjct: 240 SDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDGNNPDLRRRVLTGEISPEKLIT 299
Query: 237 MTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSAD 296
++ EE+ASD+R+QEN +IK K +F CE K +TDQFKC CG+ C+Y+QMQTRSAD
Sbjct: 300 LSAEEMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSAD 359
Query: 297 EPMTTYVTCAECNKRWK 313
EPMTTYVTC C+ WK
Sbjct: 360 EPMTTYVTCVNCDNHWK 376
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 157/367 (42%), Positives = 201/367 (54%), Gaps = 56/367 (15%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
ME++L+ F AAKKAADAAA + S PE RC DA++ L+ VT D+LVSTQVGK LR+
Sbjct: 1 MERELLETFEAAKKAADAAAGADDS-PEADRCLDAMRRLRGLRVTTDVLVSTQVGKRLRY 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRN-GSK-----------LSVD----- 103
L KHP +Q+ A++LL WK+ ++ + NG N GS + VD
Sbjct: 60 LTKHPHSDIQSMATDLLGYWKKVVIEEGKKNGTTENVGSTNSAARAEKAQPMKVDKSSAS 119
Query: 104 ----------------------EKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQA 141
EK S + VK KE T +KPS
Sbjct: 120 GSVKPEKREVNVRGQKPESIKVEKITNNDSKNQQVKVE-RAPKEATRTPDTKKPSSVPNG 178
Query: 142 ----------KDSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKARDPKQVAASV 186
D RDKIR+ L A SRV E + D+ I D V ARDP +VA +V
Sbjct: 179 PPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTV 238
Query: 187 ERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
E +FE+L A K K+RSIMFN+ + N D RRRVL+G+V PERL ++PEE+ASD
Sbjct: 239 ESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASDA 298
Query: 247 RRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCA 306
R+ EN++IK K +F CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+VTC
Sbjct: 299 RKLENKQIKEKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 358
Query: 307 ECNKRWK 313
CN WK
Sbjct: 359 NCNNHWK 365
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 204/370 (55%), Gaps = 61/370 (16%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
M+++L+ F AAKKAADAAA S PE RC DAL+ L+ V D+LVSTQVGK LR
Sbjct: 1 MDRELLETFDAAKKAADAAAGDGNS-PEAGRCLDALRRLRDIRVNTDILVSTQVGKRLRP 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS---------------------- 98
L KHP +Q A++L WK K+VL E +G K GS
Sbjct: 60 LTKHPHSGIQAVAADLFGYWK-KVVL--EESGKKNGGSENERSSDSSGKVEKARSVKIEK 116
Query: 99 ----------KLSVDEKFQK------QTSDSNAVKSGC----STAKEKKATASIRKPSHA 138
K VD + QK + + SN K+ +KE T ++P+
Sbjct: 117 NSASASMKLEKRDVDVRGQKPNNAKVEKTTSNGSKAQSVKVERVSKEVIRTPDAKRPASV 176
Query: 139 DQA----------KDSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKARDPKQVA 183
D RDKIR+ L +A RV+ E +DD+ I D V+ARDP +VA
Sbjct: 177 PNGHPKLTSLVKCNDPTRDKIRELLAEAFVRVSRETSDDDRDEVRNILDEVEARDPYRVA 236
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+VE +FE+L P + K+RSIMFN+ E N D RRRVLIG V PERL ++P+E+A
Sbjct: 237 VTVESALFERLGPSTGTHRAKYRSIMFNLRAESNTDFRRRVLIGLVAPERLPDVSPDEMA 296
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYV 303
SD R+QEN +IK K +F CE K TTDQFKC+ CG+ +Y+Q+QTRSADEPMTT+V
Sbjct: 297 SDARKQENMQIKEKALFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFV 356
Query: 304 TCAECNKRWK 313
TC CN WK
Sbjct: 357 TCVNCNNHWK 366
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 208/378 (55%), Gaps = 67/378 (17%)
Query: 1 MEKKLVTLFGAAKKAADAAA--ATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
ME L+ LF AKKAADAAA S PEV +C DALK L+ FPVTYD LV+TQVGK L
Sbjct: 1 MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS---------KLSVDE----- 104
R L KHP E +++ A++LL IWK K+V+ + K G+ K+ V++
Sbjct: 61 RSLAKHPVEDIKSVATDLLEIWK-KVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPA 119
Query: 105 --KFQK-QTSDS------------NAVKSGCSTAKEKKATASIRKPSHADQAKDSMRD-K 148
K QK Q DS N V +G + K + + D +++D K
Sbjct: 120 PVKVQKLQRGDSAKSIKVERKEPDNKVVTGVKIER-KVPDIKVTNGTKIDYRGQAVKDEK 178
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPK---------------------------- 180
+ KD + ++ A A ++T +K DP
Sbjct: 179 VSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESVN 238
Query: 181 -----QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLA 235
+VA SVE +MFEKL A+K K+RSIMFN+ D NPDLRRRVL GE++PE+L
Sbjct: 239 ASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLI 298
Query: 236 TMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSA 295
T++ E++ASD+R+QEN +IK K +F CE K +TDQFKC CG+ C+Y+QMQTRSA
Sbjct: 299 TLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSA 358
Query: 296 DEPMTTYVTCAECNKRWK 313
DEPMTTYVTC C+ WK
Sbjct: 359 DEPMTTYVTCVNCDNHWK 376
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 208/378 (55%), Gaps = 67/378 (17%)
Query: 1 MEKKLVTLFGAAKKAADAAA--ATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSL 58
ME L+ LF AKKAADAAA S PEV +C DALK L+ FPVTYD LV+TQVGK L
Sbjct: 1 MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60
Query: 59 RHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS---------KLSVDE----- 104
R L KHP E +++ A++LL IWK K+V+ + K G+ K+ V++
Sbjct: 61 RSLAKHPVEDIKSVATDLLEIWK-KVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPA 119
Query: 105 --KFQK-QTSDS------------NAVKSGCSTAKEKKATASIRKPSHADQAKDSMRD-K 148
K QK Q DS N V +G + K + + D +++D K
Sbjct: 120 PVKVQKLQRGDSAKSIKVERKEPDNKVVTGVKIER-KVPDIKVTNGTKIDYRGQAVKDEK 178
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPK---------------------------- 180
+ KD + ++ A A ++T +K DP
Sbjct: 179 VSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLMEALCRVAGEADDYERESVN 238
Query: 181 -----QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLA 235
+VA SVE +MFEKL A+K K+RSIMFN+ D NPDLRRRVL GE++PE+L
Sbjct: 239 ASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLI 298
Query: 236 TMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSA 295
T++ E++ASD+R+QEN +IK K +F CE K +TDQFKC CG+ C+Y+QMQTRSA
Sbjct: 299 TLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSA 358
Query: 296 DEPMTTYVTCAECNKRWK 313
DEPMTTYVTC C+ WK
Sbjct: 359 DEPMTTYVTCVNCDNHWK 376
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 200/370 (54%), Gaps = 61/370 (16%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
ME++L+ F AAKKAADA AA S PE RC DAL+ L+ V D+LVSTQVGK LR
Sbjct: 1 MERELLETFDAAKKAADATAADGDS-PEADRCLDALRRLRDIRVNTDILVSTQVGKRLRP 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSK--------------------- 99
L KHP +Q A++L WK K+VL E +G K GS+
Sbjct: 60 LTKHPHSGIQAVAADLFGYWK-KVVL--EESGKKNGGSENERSSDSSGKVEKVRPMKVEK 116
Query: 100 --LSVDEKFQKQTSDSNAVKSGC-------------------STAKEKKATASIRKPSHA 138
S K +K+ D K G +KE T +KP+
Sbjct: 117 NSASASMKVEKRDVDVRGQKPGSVKVEKTASNGSRTQSVKVERVSKEVSRTPDAKKPAST 176
Query: 139 DQA----------KDSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKARDPKQVA 183
D RDKIR+ L +A ++V+ E ++D+ I D V A DP +VA
Sbjct: 177 PSGAPKLTSLVKCNDPTRDKIRELLAEAFAKVSRETSNDDRDEVRNILDEVDACDPYRVA 236
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
VE +FE+L A K K+RSIMFN+ E N D RRRVLIGEVTPE L ++P+E+A
Sbjct: 237 VKVESALFERLGRSTGAHKTKYRSIMFNLRAENNTDFRRRVLIGEVTPEGLPDISPDEMA 296
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYV 303
SD R+QEN +IK K +F+CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+V
Sbjct: 297 SDARKQENMQIKEKALFECERAGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFV 356
Query: 304 TCAECNKRWK 313
TC CN WK
Sbjct: 357 TCVNCNNHWK 366
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 200/370 (54%), Gaps = 61/370 (16%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
M+++L+ F AAKKAAD AA S PE RC DAL+ L+ V D+LVSTQVGK LR
Sbjct: 1 MDRELLETFDAAKKAADEAAGDGNS-PEAGRCLDALRRLRDIRVNTDILVSTQVGKRLRP 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSK--------------------- 99
L KHP +Q A++L WK K+VL E +G K GS+
Sbjct: 60 LTKHPHSGIQAVAADLFGYWK-KVVL--EESGKKNGGSENERSSDSSGKVEKVRPVKIEK 116
Query: 100 --LSVDEKFQKQTSD-----SNAVKSGCSTAKEKKATAS---------IRKPSHADQA-- 141
S K +K+ D N VK +T+ KA + IR P A
Sbjct: 117 NSASASMKLEKRDVDVRGQKPNNVKVEKTTSNGSKAQSVKVERVSKEVIRTPDSKRPASV 176
Query: 142 -------------KDSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKARDPKQVA 183
D RDKIR+ L +A V+ E +DD+ I D V+A DP +VA
Sbjct: 177 PNGHPKLTSLVKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVA 236
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+VE +FE+L P + K+RSIMFN+ E N D RRRVLIG V PERL + P+E+A
Sbjct: 237 VTVESALFERLGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMA 296
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYV 303
SD R+QEN +IK K +F CE K TTDQFKC+ CG+ +Y+Q+QTRSADEPMTT+V
Sbjct: 297 SDARKQENMQIKEKALFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFV 356
Query: 304 TCAECNKRWK 313
TC CN WK
Sbjct: 357 TCVNCNNHWK 366
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 194/310 (62%), Gaps = 16/310 (5%)
Query: 4 KLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKK 63
+L LF A+ AA A A +E + RC +AL+ +++ VT LL+STQVGK LR L K
Sbjct: 8 QLTELFKTAQSAAQKATAVEGAEED--RCVEALQAMRSLRVTTSLLMSTQVGKQLRKLTK 65
Query: 64 HPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTA 123
H K+++ A ++L WK K+V + ++ +K G K +S + +V+ G ++
Sbjct: 66 HSRPKIRSIAVDILEDWK-KVVSSEASSKSKAEGPK----------SSANASVEKGKVSS 114
Query: 124 KEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVA 183
K+ +S K ++ D+ RDK+R+ L +A +V EA E R A+DP QVA
Sbjct: 115 KQSNGNSS-SKARPLPKSNDATRDKMREVLLEAFQKVPQEAEGQE--LARANAKDPVQVA 171
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
VE +F KL V +K K+RSI+FN+ D NPDLRRR+L+G+++ +L TM+ E++A
Sbjct: 172 VEVENALFSKLESTKVDKKAKYRSIVFNLKDPNNPDLRRRLLLGQISGSQLTTMSAEDMA 231
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYV 303
SD+R+ EN++IK K +F+CE K++ TTDQFKC CG+ C+Y Q QTRSADEPMTTYV
Sbjct: 232 SDQRKAENKQIKDKALFECERGMKQEATTDQFKCGKCGRRECTYFQKQTRSADEPMTTYV 291
Query: 304 TCAECNKRWK 313
TC CN RWK
Sbjct: 292 TCVNCNNRWK 301
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 201/370 (54%), Gaps = 62/370 (16%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
ME++L+ F AAKKAADA A S PE RC DAL L+ V D+LVSTQVGK LR
Sbjct: 1 MERELLETFDAAKKAADATAGQGDS-PEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRP 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS---------------------- 98
L KHP +Q AS+L WK K+VL E G K+NGS
Sbjct: 60 LTKHPHSGIQAVASDLFGYWK-KVVL--EETG-KKNGSSENEKSMDSSGKVEKVRPMKVE 115
Query: 99 -----------KLSVDEKFQK------QTSDSNAVKSGC-----------STAKEKKATA 130
K VD++ QK + + SN ++ T +K A+
Sbjct: 116 KNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASV 175
Query: 131 SIRKPSHADQAK--DSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKARDPKQVA 183
P K D RDKIR+ L +A ++V E ++D+ I D V A DP +VA
Sbjct: 176 PNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVA 235
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+VE +FE+ A K K+RSIMFN+ E N D RRRVLIG+VTPERL ++P+E+A
Sbjct: 236 VTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMA 295
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYV 303
SD R+QEN +IK K +F CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+V
Sbjct: 296 SDARKQENLQIKEKALFDCERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFV 355
Query: 304 TCAECNKRWK 313
TC CN WK
Sbjct: 356 TCVNCNNHWK 365
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 200/369 (54%), Gaps = 62/369 (16%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
ME++L+ F AAKKAADA A S PE RC DAL L+ V D+LVSTQVGK LR
Sbjct: 1 MERELLETFDAAKKAADATAGQGDS-PEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRP 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS---------------------- 98
L KHP +Q AS+L WK K+VL E G K+NGS
Sbjct: 60 LTKHPHSGIQAVASDLFGYWK-KVVL--EETG-KKNGSSENEKSMDSSGKVEKVRPMKVE 115
Query: 99 -----------KLSVDEKFQK------QTSDSNAVKSGC-----------STAKEKKATA 130
K VD++ QK + + SN ++ T +K A+
Sbjct: 116 KNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASV 175
Query: 131 SIRKPSHADQAK--DSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKARDPKQVA 183
P K D RDKIR+ L +A ++V E ++D+ I D V A DP +VA
Sbjct: 176 PNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVA 235
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+VE +FE+ A K K+RSIMFN+ E N D RRRVLIG+VTPERL ++P+E+A
Sbjct: 236 VTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMA 295
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYV 303
SD R+QEN +IK K +F CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+V
Sbjct: 296 SDARKQENLQIKEKALFDCERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFV 355
Query: 304 TCAECNKRW 312
TC CN W
Sbjct: 356 TCVNCNNHW 364
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 200/371 (53%), Gaps = 58/371 (15%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRS-------EPEVQRCADALKHLQAFPVTYDLLVSTQ 53
ME++L+ F AA+KAADA + PE RC DAL+ L+ VT LVSTQ
Sbjct: 1 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 60
Query: 54 VGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQK----- 108
+G+ +R+L KHP ++ AS+LL WK+ ++ + NG +NG S K +K
Sbjct: 61 IGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMK 120
Query: 109 -------QTSDSNAVKSGCSTAKEKKA------------------------TASIRKPSH 137
T ++N + + K K +S+ KPS
Sbjct: 121 VEKASPRATVNNNNMDTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSSVEKPSP 180
Query: 138 AD----------QAKDSMRDKIRKDLEKALSRVASEA-ADDEE----ITDRVKARDPKQV 182
+ D+ RD+IR L A SRV+ E DD E I + VKA DP ++
Sbjct: 181 VQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRI 240
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A VE +F+KL K+++RS+MFN+ D+ N D RRRVL+G+V PER+A +TP E+
Sbjct: 241 AVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEM 300
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
ASD R+ EN++I+ K +F+CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+
Sbjct: 301 ASDTRKLENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 360
Query: 303 VTCAECNKRWK 313
VTC CN WK
Sbjct: 361 VTCVNCNNHWK 371
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 200/371 (53%), Gaps = 58/371 (15%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRS-------EPEVQRCADALKHLQAFPVTYDLLVSTQ 53
ME++L+ F AA+KAADA + PE RC DAL+ L+ VT LVSTQ
Sbjct: 7 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 66
Query: 54 VGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQK----- 108
+G+ +R+L KHP ++ AS+LL WK+ ++ + NG +NG S K +K
Sbjct: 67 IGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMK 126
Query: 109 -------QTSDSNAVKSGCSTAKEKKA------------------------TASIRKPSH 137
T ++N + + K K +S+ KPS
Sbjct: 127 VEKASPRATVNNNNMDTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSSVEKPSP 186
Query: 138 AD----------QAKDSMRDKIRKDLEKALSRVASEA-ADDEE----ITDRVKARDPKQV 182
+ D+ RD+IR L A SRV+ E DD E I + VKA DP ++
Sbjct: 187 VQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRI 246
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A VE +F+KL K+++RS+MFN+ D+ N D RRRVL+G+V PER+A +TP E+
Sbjct: 247 AVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEM 306
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
ASD R+ EN++I+ K +F+CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+
Sbjct: 307 ASDTRKLENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 366
Query: 303 VTCAECNKRWK 313
VTC CN WK
Sbjct: 367 VTCVNCNNHWK 377
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 190/337 (56%), Gaps = 50/337 (14%)
Query: 27 PEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIV- 85
PE RC DAL+ L+AF VT ++LVSTQVGK LR+L KHP +Q A++L WK+ ++
Sbjct: 26 PEADRCLDALRRLRAFRVTTEVLVSTQVGKRLRYLTKHPHSDIQAMATDLFGYWKKIVIE 85
Query: 86 -LGKE--TNGNKR------------------NGSKLSV--------------DEKFQKQT 110
GK+ T+ N++ N S SV D K +K
Sbjct: 86 ETGKKNGTSANEKLDNSAARLEKSQSMKVEKNSSLASVKIEKNDLDIRVQKSDVKVEKIA 145
Query: 111 SDSNAVK------SGCSTAKEKKATASIRKP---SHADQAKDSMRDKIRKDLEKALSRVA 161
++ + VK T KK+++ P + + D+ RDK R+ L +A +V+
Sbjct: 146 NNDSKVKVEMVSKDVSRTLDTKKSSSVPNGPPRLTSLVRCNDAARDKYRELLAEAFFKVS 205
Query: 162 SEAADDE-----EITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
E + D+ + D V A DP +V+ +VE +FE+L A K K+RSI+FN+ +
Sbjct: 206 KETSKDDREEVRNLLDEVNACDPYRVSVTVESALFERLGRSTGAHKAKYRSILFNLKADN 265
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
NPD RRRVL+GEV P RL ++P+E+ASD R+ EN++IK K +F CE K TTDQFK
Sbjct: 266 NPDFRRRVLLGEVRPGRLVDISPDEMASDARKLENKQIKEKALFDCERAGAPKATTDQFK 325
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C CG+ +Y+Q+QTRSADEPMTT+VTC CN WK
Sbjct: 326 CGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWK 362
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 200/371 (53%), Gaps = 58/371 (15%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRS-------EPEVQRCADALKHLQAFPVTYDLLVSTQ 53
ME++L+ F AA+KAADA + PE RC DAL+ L+ VT LVSTQ
Sbjct: 1 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 60
Query: 54 VGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQK----- 108
+G+ +R+L KHP ++ AS+LL WK+ ++ + NG +NG S K +K
Sbjct: 61 IGRRIRYLTKHPHSSIKTTASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMK 120
Query: 109 -------QTSDSNAVKSGCSTAKEKKA------------------------TASIRKPSH 137
T ++N + + K K +S+ KPS
Sbjct: 121 VEKASPRATVNNNNMDTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSSVEKPSP 180
Query: 138 AD----------QAKDSMRDKIRKDLEKALSRVASEA-ADDEE----ITDRVKARDPKQV 182
+ D+ RD+IR L A SRV+ E DD E I + V+A DP ++
Sbjct: 181 VQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVQACDPFRI 240
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A VE +F+KL K+++RS+MFN+ D+ N D RRRVL+G+V PER+A +TP E+
Sbjct: 241 AVMVECPLFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEM 300
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
ASD R+ EN++I+ K +F+CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+
Sbjct: 301 ASDTRKLENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 360
Query: 303 VTCAECNKRWK 313
VTC CN WK
Sbjct: 361 VTCVNCNNHWK 371
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/314 (40%), Positives = 163/314 (51%), Gaps = 55/314 (17%)
Query: 54 VGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRN-GSK-----------LS 101
VGK LR+L KHP +Q+ A++LL WK+ ++ + NG N GS +
Sbjct: 1 VGKRLRYLTKHPHSDIQSMATDLLGYWKKVVIEEGKKNGTTENVGSTNSAARAEKAQPMK 60
Query: 102 VD---------------------------EKFQKQTSDSNAVKSGCSTAKEKKATASIRK 134
VD EK S + VK KE T +K
Sbjct: 61 VDKSSASGSVKPEKREVNVRGQKPESIKVEKITNNDSKNQQVKVE-RAPKEATRTPDTKK 119
Query: 135 PSHADQA----------KDSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKARDP 179
PS D RDKIR+ L A SRV E + D+ I D V ARDP
Sbjct: 120 PSSVPNGPPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDP 179
Query: 180 KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
+VA +VE +FE+L A K K+RSIMFN+ + N D RRRVL+G+V PERL ++P
Sbjct: 180 FRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISP 239
Query: 240 EELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPM 299
EE+ASD R+ EN++IK K +F CE K TTDQFKC CG+ +Y+Q+QTRSADEPM
Sbjct: 240 EEMASDARKLENKQIKEKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPM 299
Query: 300 TTYVTCAECNKRWK 313
TT+VTC CN WK
Sbjct: 300 TTFVTCVNCNNHWK 313
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 159/292 (54%), Gaps = 61/292 (20%)
Query: 79 IWKQKIVLGKETNGNKRNGSKLSVD--------------EKFQKQTS------------D 112
+WK+ ++ KETN NK+NG+ S D EKFQK +S D
Sbjct: 1 MWKEIVI--KETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVSKVEQFD 58
Query: 113 SNAVKSGCSTAK----------------------------EKKATASIRKP---SHADQA 141
N S +K EKK ++ P + ++
Sbjct: 59 RNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVKEEKKPSSGAAAPPKLTSMIKS 118
Query: 142 KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
KD+ RDKIR+ L +A S+V EA DEE D V A DP +VA SVE VMFE A+
Sbjct: 119 KDAARDKIRELLFEAFSKVPGEA--DEEFMDEVNASDPIRVAVSVESVMFENWGGSTGAQ 176
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K K+RSIMFN+ D KNPD RR+VL+G + PER+ M+ ++ASD+R++ENEEI K +F
Sbjct: 177 KAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKRENEEIAQKALFD 236
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CE K TTDQFKC CG+ +Y+Q+QTRSADEPMTT+VTC CN WK
Sbjct: 237 CERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWK 288
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 189/355 (53%), Gaps = 62/355 (17%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVS---TQVGKS 57
ME++LV L+ A K++ +AA ++ C +AL L+ FP+T+D+L S V +
Sbjct: 1 MEEQLVDLYTVAWKSSRSAALESK-------CLNALSRLRCFPITFDVLASIPSVDVFRG 53
Query: 58 LRHLKKHPCEKVQNAASELLHIWKQKIV-------------------------------- 85
+ L KHP K+ + ++ ++ W +K++
Sbjct: 54 FKALTKHPNMKIVDLSARVIAAWCKKLLKQLHRYEDYVSSIQKQPCTRTTAPSKDQTSQV 113
Query: 86 ---LGKE----TNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHA 138
+ KE N N R L V K K+ S + K T ASI K S
Sbjct: 114 VATVPKEAKIDINANPRTVKALKVQNKSFKKVSRTQTPK--ILTPHPHSKAASIPKSS-- 169
Query: 139 DQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMG 198
+S+R+ IR+ + +ALS V +EA D +K DP Q+AAS+E +F K
Sbjct: 170 ----NSLRESIREQISQALSMVFNEAKHDT-----LKTCDPIQIAASLESALFVKWGVSN 220
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
+ K+RS++FN+ D KNPD RR++L+GE+ E +A M ++ASDE +++N+ I+AK
Sbjct: 221 TRSRTKYRSLLFNIKDPKNPDFRRKILVGEIKAEEVAEMDAGQMASDEMQRKNQGIQAKS 280
Query: 259 MFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++KC V +++GTTDQFKC CG+ +Y+QMQTRSADEPMTTYVTC C+ WK
Sbjct: 281 LWKCIVGREQEGTTDQFKCGKCGEKRTTYYQMQTRSADEPMTTYVTCTICDNHWK 335
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 167/317 (52%), Gaps = 61/317 (19%)
Query: 54 VGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS--------------- 98
VGK LR L KHP +Q AS+L WK K+VL E G K+NGS
Sbjct: 4 VGKRLRPLTKHPHSGIQAVASDLFGYWK-KVVL--EETG-KKNGSSENEKSMDSSGKVEK 59
Query: 99 ------------------KLSVDEKFQK------QTSDSNAVKSGC-----------STA 123
K VD++ QK + + SN ++ T
Sbjct: 60 VRPMKVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTD 119
Query: 124 KEKKATASIRKPSHADQAK--DSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKA 176
+K A+ P K D RDKIR+ L +A ++V E ++D+ I D V A
Sbjct: 120 AKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDA 179
Query: 177 RDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
DP +VA +VE +FE+ A K K+RSIMFN+ E N D RRRVLIG+VTPERL
Sbjct: 180 CDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPD 239
Query: 237 MTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSAD 296
++P+E+ASD R+QEN +IK K +F CE K TTDQFKC CG+ +Y+Q+QTRSAD
Sbjct: 240 ISPDEMASDARKQENLQIKEKALFDCERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSAD 299
Query: 297 EPMTTYVTCAECNKRWK 313
EPMTT+VTC CN WK
Sbjct: 300 EPMTTFVTCVNCNNHWK 316
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 158/273 (57%), Gaps = 48/273 (17%)
Query: 49 LVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQK 108
++ VGK LR L KHP +K+Q AS+L+ IWK ++ +ET NK+NG L E +
Sbjct: 59 VIDILVGKRLRTLTKHPTKKIQALASDLIDIWKNIVI--EETTKNKKNGD-LEDKESPKP 115
Query: 109 QTSDSNAVK-------SGCSTAKEKKATASIRKPSH----------ADQAKDSMRDKIRK 151
T++ VK S K +K T+ ++KPSH + D++RDK+R+
Sbjct: 116 VTANPENVKATPLLKVSKAENIKVEKQTSGVKKPSHNIVGPPKLTSISKCNDALRDKVRE 175
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L +ALS+V EA DE+I D V A DP +VA +F+
Sbjct: 176 LLSEALSKVVGEA--DEDIMDAVNACDPIRVA-------------------------VFS 208
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
D KNPDLRR+VL+G+V PERL M PEE+ASD R+ EN++IK K +F CE+ K T
Sbjct: 209 -GDAKNPDLRRKVLLGQVMPERLLEMGPEEMASDRRQLENQQIKEKALFDCELGAAPKAT 267
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVT 304
TDQFKC CG+ +Y+Q+QTRSADEPMTT+VT
Sbjct: 268 TDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVT 300
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 118/176 (67%), Gaps = 5/176 (2%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDE-----EITDRVKARDPKQVAASVERVMFEKLRPM 197
D RDKIR+ L +A V+ E +DD+ I D V+A DP +VA +VE +FE+L P
Sbjct: 69 DPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFERLGPS 128
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
+ K+RSIMFN+ E N D RRRVLIG V PERL + P+E+ASD R+QEN +IK K
Sbjct: 129 TGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASDARKQENMQIKEK 188
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+F CE K TTDQFKC+ CG+ +Y+Q+QTRSADEPMTT+VTC CN WK
Sbjct: 189 ALFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWK 244
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 116/174 (66%), Gaps = 2/174 (1%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
+A DS RD+ R+ L +A + SE D E VK D +VA +VE +F KL
Sbjct: 202 KAGDSTRDRFREFLIEAFKKCCSEVTD--EHLAMVKKTDLVRVAVAVESALFSKLGQSKG 259
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
+EK K+RSIMFN+ D+ NPD RRR+LIGE+ PE +A MT +++ASD R++ENE I+ K +
Sbjct: 260 SEKAKYRSIMFNLKDQNNPDFRRRILIGEIKPEEIANMTADDMASDARKKENESIREKAL 319
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F+CE + +TDQF+C CG+ +Y Q+QTRSADEPMTT+V C CN RWK
Sbjct: 320 FECERGLQNVASTDQFRCGKCGQRKTTYFQLQTRSADEPMTTFVQCVNCNARWK 373
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 2 EKKLVTLFGAAKKAADAAAATNRS-EPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
E +LV+LF A AA+ A + E RC +ALK + A V+ +L+STQVGK LR
Sbjct: 3 EAELVSLFEKASNAAEKAVSDGAVLAAEEMRCQEALKAMGAVEVSTSILLSTQVGKRLRK 62
Query: 61 LKKHPCEKVQNAASELLHIWKQKI 84
L KH K+ +A +LL WK+ +
Sbjct: 63 LTKHQSSKISGSAQQLLEKWKKVV 86
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 172/318 (54%), Gaps = 58/318 (18%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
MEK+LV L+ AAKKAADAA + + E E RC DAL+ L+ FPV Y +LV+TQVGK L+
Sbjct: 1 MEKELVELYEAAKKAADAAISGD-GEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKV 59
Query: 61 LKKHPCEKVQNAASELLHIWKQKIV--LGKETNGN------------------------- 93
L KHP +K+++ A +L+ IWK I+ GK NG
Sbjct: 60 LTKHPRQKIKSFAIDLIEIWKGIIIKETGKNKNGGSDSKDESANREKSKAGKMQKSPSVK 119
Query: 94 ------------KRNGSKLSVDEKFQKQTSD------SNAVKSGCSTAKEKKATASIRKP 135
+RNG+ S E +K +D A E+K + +K
Sbjct: 120 IEKGETVKVEKIERNGTSKSSFENMKKVQNDVKNERTDRAASVKMEKIAEEKPISGAKKM 179
Query: 136 SHADQA----------KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAAS 185
S + A D+ RDKI++ L +ALS+V EA DE++ V DP +VA +
Sbjct: 180 SSSSTAPPKLKTMIKSSDATRDKIKEILHEALSKVTREA--DEDLVAVVNDSDPIRVAVT 237
Query: 186 VERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD 245
VE V+FEK P A+K K+RS+MFN+ D NPD RR+VL+G V PE+L M+ E+AS+
Sbjct: 238 VESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASE 297
Query: 246 ERRQENEEIKAKFMFKCE 263
+R+QE ++I K +F+CE
Sbjct: 298 QRKQEYQKITEKALFECE 315
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 166/319 (52%), Gaps = 60/319 (18%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYD-LLVSTQVGKSLR 59
MEK+ ++LF +AKK+A A + PEV RC DAL L+ FPVT +LVST V K ++
Sbjct: 1 MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ 60
Query: 60 HLKKHPCEKVQNAASELLHIWKQKIVL-----------GKETNGNK----------RNGS 98
+L KH + ++ AAS LL W + + K T+G++ R
Sbjct: 61 YLTKHRVKMIRTAASCLLDAWSRNLYARNPAIDGKTQPTKSTSGSRPATLIVKIQGRVIG 120
Query: 99 KLSVDEKFQKQTSDSNAVKSGCSTAKEK-------------------------------- 126
++ V+ Q + ++G S K+
Sbjct: 121 RVKVNMPIQTEKKIKEEKENGSSCFKKPPQDPAMHCTKPGKVQSIRRCFKKPSTKRITQQ 180
Query: 127 ---KATASIRKPSHAD-QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
K S +KPS + D +R K+R L ++L RVA E +D + + V+ RDP V
Sbjct: 181 ENVKDFCSFKKPSEEPVKCSDGLRSKVRHILVESLCRVAKEVKED--LMEAVRLRDPIIV 238
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
AA VE +MFE++ ++ K+RSI+FNM D KNPDLRR+VL+G++ PE+L TMT EE+
Sbjct: 239 AADVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLVTMTAEEM 298
Query: 243 ASDERRQENEEIKAKFMFK 261
AS++R+ EN++I+ K ++K
Sbjct: 299 ASNQRQFENDQIRKKSLWK 317
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 166/319 (52%), Gaps = 60/319 (18%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYD-LLVSTQVGKSLR 59
MEK+ ++LF +AKK+A A + PEV RC DAL L+ FPVT +LVST V K ++
Sbjct: 1 MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ 60
Query: 60 HLKKHPCEKVQNAASELLHIWKQKIVL-----------GKETNGNK----------RNGS 98
+L KH + ++ AAS LL W + + K T+G++ R
Sbjct: 61 YLTKHRVKMIRTAASCLLDAWSRNLYARNPAIDGKTQPTKSTSGSRPGTLIVKIQGRVIG 120
Query: 99 KLSVDEKFQKQTSDSNAVKSGCSTAKEK-------------------------------- 126
++ V+ Q + ++G S K+
Sbjct: 121 RVKVNMPIQTEKKIKEEKENGSSCFKKPPQDPAMHCTKPGKVQSIRRCFKKPSTKRITQQ 180
Query: 127 ---KATASIRKPSHAD-QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
K S +KPS + D +R K+R L ++L RVA E +D + + V+ RDP V
Sbjct: 181 ENVKDFCSFKKPSEEPVKCSDGLRSKVRHILVESLCRVAKEVKED--LMEAVRLRDPIIV 238
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
AA VE +MFE++ ++ K+RSI+FNM D KNPDLRR++L+G++ PE+L TMT EE+
Sbjct: 239 AADVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRKLLLGQIKPEKLVTMTAEEM 298
Query: 243 ASDERRQENEEIKAKFMFK 261
AS++R+ EN++I+ K ++K
Sbjct: 299 ASNQRQFENDQIRKKSLWK 317
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 101/142 (71%)
Query: 172 DRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTP 231
D +K DP Q+AAS+E +F K + K+RS++FN+ D KNPD RR++L+GE+
Sbjct: 9 DTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGEIKA 68
Query: 232 ERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQ 291
E +A M ++ASDE +++N+ I+AK ++KC V +++GTTDQFKC CG+ +Y+QMQ
Sbjct: 69 EEVAEMDAGQMASDEMQRKNQGIQAKSLWKCIVGREQEGTTDQFKCGKCGEKRTTYYQMQ 128
Query: 292 TRSADEPMTTYVTCAECNKRWK 313
TRSADEPMTTYVTC C+ WK
Sbjct: 129 TRSADEPMTTYVTCTICDNHWK 150
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 154/283 (54%), Gaps = 16/283 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T DLL ST++G S+ L+K + +V + A L+ WK+ + ++ N
Sbjct: 29 DLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLLDASEDKND 88
Query: 93 NKRNGSKLSVDEKFQKQTSD--SNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIR 150
K+ S L+ K T D SN + T K T P D ++R+K R
Sbjct: 89 EKKRNSSLATSSKDASDTKDQSSNKKQDPPRTLTTPKITTFPPIPITCD----AVRNKCR 144
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
+ L AL D++ I D + ++A +E +++ ++ + K + RS +
Sbjct: 145 EMLTAALQ------TDNDHI---AIGADCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRIS 195
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D KNPDLR+ VL G +TPE++A MT EE+AS+E ++ + + + + + ++ +
Sbjct: 196 NLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQMAKTGGT 255
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 256 QTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 298
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 163/350 (46%), Gaps = 57/350 (16%)
Query: 5 LVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKH 64
L TL +++ AAD A E R D LK LQ VT DLL T GK L KH
Sbjct: 13 LKTLESSSQGAADGDKA------EEARMLDVLKQLQRRGVTADLLKRTNAGKRLNKFCKH 66
Query: 65 PCEKVQNAASELLHIWKQ---------------------KIVLGKETNGNKRNGSKLSVD 103
+ V +A + WKQ K + ++ R G L+
Sbjct: 67 ASDAVSKSAKAAVEAWKQCVKKETADGGDTAEGGASQPAKAPMANDSAAGGREGQPLAGA 126
Query: 104 EKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQA--------KDSMRDKIRKDLEK 155
+ ++S S+ + R+PS + + RDK+R L +
Sbjct: 127 SAAPASGTSGGGLRSAGSSQQ-----LLTRQPSASSSGFSVDPPRCGNETRDKVRSMLAE 181
Query: 156 ALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKL---------RPMGVAE-KRKH 205
AL+ D T + P Q+ A++E +++ + R AE K K
Sbjct: 182 ALAVGYVGGGD----TGPSSLQSPNQLGAAIEEALYDLMGGGGGGGGGREAVSAEYKAKA 237
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV- 264
RS+ FN+ D KNPDLR RVL G V PE L ++ EE+ASDE++++N E+K +++ K V
Sbjct: 238 RSLCFNLKDAKNPDLRERVLSGSVPPETLVRLSAEEMASDEQKKKNRELK-EWLAKEAVR 296
Query: 265 -PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TTD F+C C + C+Y+Q+QTRSADEPMTT+VTC C +RWK
Sbjct: 297 GATTNAATTDMFQCGRCKQRKCTYYQLQTRSADEPMTTFVTCTNCGQRWK 346
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 157/320 (49%), Gaps = 25/320 (7%)
Query: 9 FGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVG----KSLRHLKKH 64
+ + KA++ A + SE RC D LK L A V L VS +VG + KK
Sbjct: 14 YASLAKASEDAGSNTASE---DRCVDVLKTLAAMKVPVKLFVSGEVGDAAKAIKKLAKKG 70
Query: 65 PCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAK 124
P + ++ AS + WK KI+LG G ++ + +SG + +
Sbjct: 71 PTDAIKAEASACVAAWK-KIMLGAVEGGEDKDKEDADAAAATTTTKKEVEGGESGGAKKE 129
Query: 125 EKKATASIRKPSHAD-----------QAKDSMRDKIRKDLEKALSRVASEAADDEEITDR 173
E+ K +D D +RD+ R+ L +A++ +A ++
Sbjct: 130 EEDGDGDGEKKDASDGETNLKKLLEPALGDPLRDRTRELLAEAIA----QAIGAPDVYAS 185
Query: 174 VKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPER 233
V+ D Q A ++E M + G K K R + FN+ D KNPDLRR V G ++P
Sbjct: 186 VE--DVAQTAIAIENAMHAQWSDTGKEYKAKFRQLSFNLKDPKNPDLRRSVADGLISPAV 243
Query: 234 LATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTR 293
L ++PEEL SDERR N +I+ + +KK+ +TD FKC C + C+Y+Q+QTR
Sbjct: 244 LLDLSPEELGSDERRNSNAKIREHATNEAVRGQKKEASTDAFKCGKCKQRKCTYYQLQTR 303
Query: 294 SADEPMTTYVTCAECNKRWK 313
SADEPMTT+VTC C+ RWK
Sbjct: 304 SADEPMTTFVTCVNCDNRWK 323
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 18/282 (6%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNK 94
L L + P+ ++L T++G ++ L+K E V A L+ WK + E +K
Sbjct: 32 LDALSSLPINVNVLTKTRIGMTVNDLRKKSTDEHVSKRAKNLIKEWKTLL----ENKNHK 87
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK---DSMRDKIRK 151
NG+ V + +S+ + + S A+ +TA+ P A + D MR+K +
Sbjct: 88 GNGTSNDVMPRTDSASSNLSEDSTSRSAAQHSTSTANHSAPPPAPTRQFLNDEMRNKCIQ 147
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL +E+ D DP+++A +E+ +FE R G + RS +FN
Sbjct: 148 MLLSAL--------QSKELPD--GTHDPEELAIKIEKKLFEVHRGTGDKYRSAVRSRVFN 197
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D+KN LR VL G VTP + A MT EE+ASDE R + E+ + + + ++ ++
Sbjct: 198 LRDKKNAALRENVLTGVVTPAKFAVMTSEEMASDEMRSQREKFTKQAIEEHQMSVQEGTP 257
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+D FKC CGK NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 258 SDMFKCGKCGKKNCTYTQVQTRSADEPMTTFVFCRECGNRWK 299
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 160/284 (56%), Gaps = 17/284 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T DLL ST++G S+ L+K E+V + A L+ WK+ + +E N
Sbjct: 28 DLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLDASEEKNE 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK---DSMRDKI 149
+K+ LS+ ++T +S S + +E T + K + A D++R+K
Sbjct: 88 DKKKS--LSLPTSSSRETGNSRDQSS--NKRQEPPKTPTTPKITTFPPAPITCDAVRNKC 143
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ L AL ADD+ I D + +AA +E +++ ++ + K + RS +
Sbjct: 144 REMLTAALQ------ADDDYI---AIGADCEHIAAQIEECIYQDVKNTDMKYKNRVRSRI 194
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ D KNP+L++ VL G +TPE++A MT EE+AS+E ++ + + + + + ++ +
Sbjct: 195 SNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQMAKTGG 254
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 255 TQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 298
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 154/284 (54%), Gaps = 17/284 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T DLL ST++G S+ L+K + +V + A L+ WK+ + ++ N
Sbjct: 29 DLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLLDASEDKND 88
Query: 93 NK-RNGSKLSVDEKFQKQTSD--SNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
K RN S + K T D SN + T K T P D ++R+K
Sbjct: 89 EKKRNSSLATSSSKDASDTKDQSSNKKQDPPRTISTPKITTFPPIPITCD----AVRNKC 144
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ L AL D++ + D + ++A +E +++ ++ + K + RS +
Sbjct: 145 REMLTAALQ------TDNDHV---AIGADCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRI 195
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ D KNPDLR+ VL G +TPE++A MT EE+AS+E ++ + + + + + ++ +
Sbjct: 196 SNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQMAKTGG 255
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 256 TQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 299
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 81/105 (77%)
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKK 268
MFN+ D NPDLRRRVL GE++PE+L T++ EE+ASD+R+QEN +IK K +F CE
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQIKEKALFDCERGLAA 60
Query: 269 KGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K +TDQFKC CG+ C+Y+QMQTRSADEPMTTYVTC C+ WK
Sbjct: 61 KASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWK 105
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 154/283 (54%), Gaps = 13/283 (4%)
Query: 33 ADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVLGKETN 91
D LK L++ P+T DLL ST++G S+ L+K + +V + A L+ WK+ + +E N
Sbjct: 92 VDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLLDASEERN 151
Query: 92 GNKRNGSKLS-VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIR 150
K+ S L K T D +A+K + + T I D++R+K R
Sbjct: 152 DEKKKNSYLPKSSSKDATDTKDQSAIKK--QESPKTPTTPKITTFPPVPITCDAVRNKCR 209
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
+ L AL D++ I D + ++A +E +++ ++ + K + RS +
Sbjct: 210 EMLTAALQ------TDNDHI---AIGTDCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRIS 260
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D KNPDLR+ VL G +TPE++A MT EE+AS+E ++ + + + + + ++ +
Sbjct: 261 NLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQMAKTGGT 320
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 321 QTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 363
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 163/307 (53%), Gaps = 30/307 (9%)
Query: 11 AAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKV 69
AKK+AD A D LK L++ P+T DLL ST++G S+ L+K E+V
Sbjct: 18 VAKKSADGAM-------------DLLKELKSMPMTLDLLQSTRIGMSVNALRKQSSDEEV 64
Query: 70 QNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKAT 129
A L+ WK+ +L ++ LS+ K+T +S S + +E T
Sbjct: 65 IALAKSLIKSWKK--LLDASEEKSEEKKKNLSLPTSSSKETGNSRDQSS--NKRQEPPKT 120
Query: 130 ASIRKPSHADQAK---DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASV 186
+ K + A D++R+K R+ L AL ADD+ I D + +AA +
Sbjct: 121 PTTPKITTFPPAPVTCDAVRNKCREMLTTALQ------ADDDYI---AIGADCEHIAAQI 171
Query: 187 ERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
E +++ ++ + K + RS + N+ D KNP+L++ VL G +TPE++A MT EE+AS+E
Sbjct: 172 EECIYQDIKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNE 231
Query: 247 RRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCA 306
++ + + + + + ++ + TD F C C K NC+Y Q+QTRS+DEPMTT+V C
Sbjct: 232 LKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCN 291
Query: 307 ECNKRWK 313
EC RWK
Sbjct: 292 ECGNRWK 298
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 152/286 (53%), Gaps = 30/286 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ P+T +LL ST VG S+ L+K + ++ + L+ WK K++ G E G
Sbjct: 29 DLLRELKNMPITLELLQSTHVGMSVNALRKQSNDNEIITLSKSLIKSWK-KLLDGSEQPG 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+ KL V K+ S ++ +TA K R P + DS+R K R+
Sbjct: 88 KE----KLQVKPTCSKELGSSKKIEVPKTTAPSKMT----RFPPLPVTS-DSVRTKCREM 138
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L +A D + + D + +AA +E V+F +L+ + K + RS + N+
Sbjct: 139 L------IAVLQTDGDHVAI---GADCELLAAQIEEVVFRELQNTDMKYKNRIRSRISNL 189
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNPDLR+ VL G +TPE++A M+ EE+AS+E ++ +EI K + E + G T
Sbjct: 190 KDSKNPDLRKNVLCGIITPEQIAIMSCEEMASNELKEMRKEIT-----KASIQEHQMGKT 244
Query: 273 -----DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 245 GGTQSDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 290
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 159/303 (52%), Gaps = 29/303 (9%)
Query: 27 PEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIV 85
P ++ D LK LQ P+T DLL + VG S+ L+K + +V +L+ WK+ +
Sbjct: 23 PNTEKALDLLKSLQEMPMTLDLLQKSHVGLSVNTLRKKCSDSEVSGVGKKLIKQWKK--L 80
Query: 86 LGKETNGNKRNGSKLSVDEK------FQKQTSDSNAVKSGCSTAKEKKAT---------A 130
L ++ + + + S D+ + Q S + +G +T
Sbjct: 81 LSADSPKSSTSERRRSSDQSSPPPVVYNPQNSSAQPTSNGSTTPTSSTMPVPEFSLSIDG 140
Query: 131 SIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVM 190
S R P ++ +++ RD + K ++K L+ V E DD + + ++A++E +
Sbjct: 141 SSRVPPTSNAVRNTCRDMVYKAMKKGLNEVNIE--DDTRLYN---------LSAAIEDQI 189
Query: 191 FEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQE 250
F + + + K + RS + N+ D KNP L+++++ GE++P R+A M+ EE+AS++ ++
Sbjct: 190 FSEFKDTNMKYKNRVRSRVSNIGDLKNPGLKQKIISGEISPARIAKMSTEEMASEDMKKL 249
Query: 251 NEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNK 310
+E + + ++ + +D KC CGK NCSY+QMQTRSADEPMTT+V C EC
Sbjct: 250 RQEYTKEAIRDSQMAVTQGTKSDLLKCGKCGKRNCSYNQMQTRSADEPMTTFVLCNECGH 309
Query: 311 RWK 313
RWK
Sbjct: 310 RWK 312
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 80/105 (76%)
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKK 268
MFN+ D NPDLRRRVL GE++PE+L T++ EE+ASD+R+QEN IK K +F CE
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNHIKEKALFDCERGLAA 60
Query: 269 KGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K +T+QFKC CG+ C+Y+QMQTRSADEPMTTYVTC C+ WK
Sbjct: 61 KASTEQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWK 105
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 156/284 (54%), Gaps = 17/284 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T DLL ST++G S+ L+K E+V A L+ WK+ +L
Sbjct: 2 DLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVIALAKSLIKSWKK--LLDASEEK 59
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK---DSMRDKI 149
++ LS+ K+T +S S + +E T + K + A D++R+K
Sbjct: 60 SEEKKKNLSLPTSSSKETGNSRDQSS--NKRQEPPKTPTTPKITTFPPAPITCDAVRNKC 117
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ L AL ADD+ I D + +AA +E +++ ++ + K + RS +
Sbjct: 118 REMLTSALQ------ADDDYI---AIGADCEHIAAQIEECIYQDIKNTDMKYKNRVRSRI 168
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ D KNP+L++ VL G +TPE++A MT EE+AS+E ++ + + + + + ++ +
Sbjct: 169 SNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQMAKTGG 228
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 229 TQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 272
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 152/288 (52%), Gaps = 26/288 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T LL ST++G S+ L+K E V A L+ WK K++ E G
Sbjct: 28 DLLKELKSMPITLHLLQSTRIGMSVNALRKQSTDEDVIALAKSLIKAWK-KLLDASEDKG 86
Query: 93 N--KRNG-----SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
N KRN S+ S D K Q + K+ + I D++
Sbjct: 87 NEKKRNSLPTSSSRESGDSKDQSSIKRQDLPKTPTTPKITTFPPVPI--------TCDTV 138
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R K R+ L AL D++ + V D +++AA +E +++ ++ + K +
Sbjct: 139 RSKCREMLTSALQ------TDNDYVAIGV---DCEEMAAQIEEFIYQDVKNTDLKYKNRV 189
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNPDLR+ VL G +TPE++A MT EE+AS+E ++ + + + + + ++
Sbjct: 190 RSRISNLKDSKNPDLRKNVLCGVITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQMA 249
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 250 KTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 145/281 (51%), Gaps = 12/281 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A PVT LL ST+VG S+ L+K E+V A L+ WK+ +L
Sbjct: 85 DLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKK--LLDASDAK 142
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+ G + + K S++ S +T I D++R+K R+
Sbjct: 143 TRERGRGMPLPTSSSKDASEAVDPSRKRSEMPRMPSTPRITTFPPVPVTCDAVRNKCREM 202
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + D ++++A +E +F + + K + RS + N+
Sbjct: 203 LSAALQ------TDHDHV---AIGADLERLSAQIEECIFRDVGNTDMKYKNRVRSRISNL 253
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 254 KDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 313
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F CS C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 314 DLFTCSKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 354
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 159/285 (55%), Gaps = 16/285 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
+ L L A P+ ++L T++G ++ L+K E++ A L+ WK ++L +T+
Sbjct: 30 ELLDALAALPIDINILTKTRIGMTINDLRKKTSDEQIAKRAKVLIKEWK--VLLANKTSS 87
Query: 93 NKRNG--SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIR 150
+K + + + ++ S + K ++ +K TA+ PS A + K + D++R
Sbjct: 88 SKGDAKDAVSKSNSSASLSSTFSESSKHLSQSSAPQKNTANSSTPSMATR-KQLLPDEVR 146
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH--RSI 208
+ + +A +E+ D DP+++A ER +FE R G +EK + RS
Sbjct: 147 NKC----ATMILDALLSKELPD--GTLDPEELAIRTERKLFEVHR--GTSEKYRAALRSR 198
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKK 268
+FN+ D+KN LR VLIG VTPE+ A MT +E+ASDE + + E+ + + + ++ ++
Sbjct: 199 VFNLRDKKNLVLRENVLIGAVTPEKFAVMTADEMASDEMKAQREKFTKQAIEEYQMAVQE 258
Query: 269 KGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+D FKC CGK NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 259 GTPSDMFKCGKCGKKNCTYTQVQTRSADEPMTTFVFCRECGNRWK 303
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 147/282 (52%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 36 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 94
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+R G+ L + + D + + A +T I D++RDK R+
Sbjct: 95 RERGRGTPLPTSSRDASEAQDPSRKRPELPRAP---STPRITTFPPVPVTCDAVRDKCRE 151
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + D K+++A +E +F + + K + RS + N
Sbjct: 152 MLTAALQ------TDHDHV---AIGADCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISN 202
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR VL G +TP+R+A MT EE+ASDE ++ + + + + + ++
Sbjct: 203 LKDAKNPDLRRNVLCGAITPQRIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 262
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K +C+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 263 TDLFTCGKCRKKSCTYTQVQTRSSDEPMTTFVVCNECGNRWK 304
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 155/292 (53%), Gaps = 29/292 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G +
Sbjct: 28 DLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSND- 85
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKS--------GCSTAKEKKATAS---IRKPSHADQA 141
K S D+K + +S N+ ++ S KE+ T S I A
Sbjct: 86 ------KDSEDKKKEAASSSQNSPEAREESSSSSNSSNRKEESNTGSDAFISSFPRAPIT 139
Query: 142 KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
DS+R K R+ L AL + DD D +++ + +E +F++L+ +
Sbjct: 140 SDSVRMKCREMLAAAL-----KTGDDYIAI----GADEEELGSQIEEAIFQELKNTDMKY 190
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+R A MT EE+ASDE ++ + + + + +
Sbjct: 191 KNRVRSRIANLKDTKNPNLRKNVLCGNIAPDRFAKMTAEEMASDELKEMRKNLTKEAIRE 250
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 251 HQMAKTGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 302
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 37/296 (12%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNK 94
L L A PV ++L T++G ++ L+K E + A L+ WK ++L +T+ +K
Sbjct: 32 LDALSALPVDINILTKTRIGMTINDLRKKTSDEHIAKRAKALIKEWK--VLLANKTSSSK 89
Query: 95 RNG---------------SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHAD 139
+ + + K Q+S S S TA T + RK D
Sbjct: 90 GDAKDAVAKNSSSPSVSSTTFNESSKHLSQSSVSQKCTSS-GTANSSTPTPTARKQLLPD 148
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
+ ++ I L+ LS+ E+ D DP+++A ER +FE R G
Sbjct: 149 EVRNKCATMI---LDALLSK---------ELPD--GTLDPEELAVRTERKLFEVHR--GT 192
Query: 200 AEKRKH--RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
+EK + RS +FN+ D+KN LR VLIG VTPE+ A MT +E+ASDE + + E+ +
Sbjct: 193 SEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVMTADEMASDEMKAQREKFTKQ 252
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ ++ +D FKC CGK NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 253 AIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADEPMTTFVFCRECGNRWK 308
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 150/287 (52%), Gaps = 36/287 (12%)
Query: 33 ADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKI-----VL 86
+D L L+ P+T D+L T++G ++ L+K E VQ A L+ WK+ + V
Sbjct: 29 SDLLNQLKKLPITLDILQKTRIGMTVNVLRKASDREDVQIIAKSLIKSWKKLLDSQDKVK 88
Query: 87 GKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMR 146
K N + + +S ++ +K +S+S A+KS + K A++R
Sbjct: 89 AKSIPEND-SSTVISSNQDIKKPSSNSVAMKS----FNKNKGDAAVRSQCQ--------- 134
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
+ S + SE D DP +AA++E +F + + + K +
Sbjct: 135 -------QMIASSLKSENNPD---------YDPTNIAAAIENEIFMCFKDTNIKYRNKIK 178
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+ D++NP+L + V+ G +TPER A MT EE+ASDE ++E ++I + + + ++
Sbjct: 179 SKVMNLRDKRNPELCQLVIEGVITPERFAKMTAEEMASDEMKKERKKITEEAIKEHQLAT 238
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
T QFKC CGK N +Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 239 TAGTATGQFKCGKCGKRNTTYNQVQTRSADEPMTTFVYCIECGNRWK 285
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 160/284 (56%), Gaps = 18/284 (6%)
Query: 33 ADALKHLQAFPVTYDLLVSTQVGKSLRHL-KKHPCEKVQNAASELLHIWKQKIVLGKETN 91
D L L+ P+T + L T++G S+ + KK VQ A L+ +WK+ +L +++
Sbjct: 30 VDLLTKLKDLPITLECLQKTRIGMSVNTMRKKSNNSNVQTLAKSLIKLWKK--LLPEKSG 87
Query: 92 GNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKP-SHADQAKD-SMRDKI 149
+K+ + + EK + TS + + KS S A T KP S + D S+R K
Sbjct: 88 SDKKADNGKASSEKSSRSTSPALSTKSDTSDAP---TTPKDNKPISFPNTITDESVRGKC 144
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ + +L +V E E +T P++VAA+ E+++FE+ + V K++ RS +
Sbjct: 145 REMIVNSL-QVQGEF---EAVTK------PEEVAAACEQLIFEEFKDTNVKYKQRIRSRV 194
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ D KNP L+ RVL GE++P RLA MT EE+ASDE ++ +E + + + ++ +
Sbjct: 195 NNLRDPKNPMLKVRVLGGEISPARLAVMTSEEMASDEMKKLRQEFTKEGIREAQMAKNAG 254
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
T+ FKC CGK +Y+Q+QTRSADEPMTT+V C C RWK
Sbjct: 255 TKTNLFKCGRCGKRETTYNQLQTRSADEPMTTFVYCMNCGNRWK 298
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 152/296 (51%), Gaps = 33/296 (11%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T +LL ST++G S+ ++K + +V + A L+ WK+ +L + ++G
Sbjct: 30 DLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKALIKSWKK--LLDEPSSG 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAK---------------EKKATASIRKPSH 137
+K + DEK ++ T+ + + + E I
Sbjct: 88 DKPS------DEKRKEPTTPVSPSQGSPEAKEESSSSSNSSSKSEPGEVSTNTLINTFPR 141
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
A DS+R K R+ L AL +A DD D ++ A +E V+F++ +
Sbjct: 142 APGTSDSIRIKCRELLANAL-----QAGDDHIAI----GADCDELGAQIEEVIFQEFKNT 192
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
+ K + RS + N+ D KNP+LRR VL G VTPER+A M+ EE+ASDE R+ + + +
Sbjct: 193 DMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMSAEEMASDELREMRKNLTKE 252
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ TD F C C C+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 253 AVRDHQMATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMTTFVFCNECGNRWK 308
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 145/282 (51%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 29 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 87
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+R G+ L + + D + + A +T I D++R+K R+
Sbjct: 88 RERGRGTPLPTSSRDASEAPDPSRKRPELPRAP---STPRITTFPPVPVTCDAVRNKCRE 144
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL A D ++++A +E +F + + K + RS + N
Sbjct: 145 MLTAALQTAHDHVA---------IGADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISN 195
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 196 LKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 255
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 256 TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 162/314 (51%), Gaps = 21/314 (6%)
Query: 8 LFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC- 66
L + D+ ++R+ E D LK L+ P+T +LL +T++G S+ ++K
Sbjct: 2 LIQMSLSVVDSKPVSSRTVYEPAGALDLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTD 61
Query: 67 EKVQNAASELLHIWKQKIVLGKETNGN----KRNGSKLSVDEKFQKQTSDSNAVKSGCST 122
E+V + A L+ WK K++ G T+ + K+ + S + ++ S S++ S
Sbjct: 62 EEVTSLAKSLIKSWK-KLLDGPSTDKDSEEKKKEPASSSQNSPEAREESSSSSNSSSRKE 120
Query: 123 AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKAL---SRVASEAADDEEITDRVKARDP 179
+ + I A DS+R K R+ L AL + AD+EE+
Sbjct: 121 EGSAPSNSFIPSFPRAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEEEL--------- 171
Query: 180 KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
+ +E +F++L+ + K + RS + N+ D KNP+LR+ VL G + P++ A MT
Sbjct: 172 ---GSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTA 228
Query: 240 EELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPM 299
EE+ASDE ++ + + + + + ++ + TD F C C K NC+Y Q+QTRSADEPM
Sbjct: 229 EEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPM 288
Query: 300 TTYVTCAECNKRWK 313
TT+V C EC RWK
Sbjct: 289 TTFVVCNECGNRWK 302
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 156/291 (53%), Gaps = 28/291 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 93 NKRNG-------SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 85 DPEEKKKEPAITSQNSPEAREESSSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
R K R+ L AL + AD+EE+ + +E +++++R + K
Sbjct: 141 RLKCREMLAAALRTGDDYVAIGADEEEL------------GSQIEEAIYQEIRNTDMKYK 188
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 189 NRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREH 248
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 147/282 (52%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 29 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 87
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+R G+ L + + D + + A +T I D++R+K R+
Sbjct: 88 RERGRGTPLPTSSRDASEAPDPSRKRPELPRAP---STPRITTFPPVPVTCDAVRNKCRE 144
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + D ++++A +E +F + + K + RS + N
Sbjct: 145 MLTAALQ------TDHDHV---AIGADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISN 195
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 196 LKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 255
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 256 TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 144/281 (51%), Gaps = 12/281 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A PVT LL ST+VG S+ L+K E++ A L+ WK+ + +
Sbjct: 28 DLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKTR 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
++ G+ L K TS + + +T I D++R+K R+
Sbjct: 88 DQGRGTPLPTSS--SKDTSGTTDLSCKKPDPPRTLSTPRITTFPSVPITCDAVRNKCREM 145
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + D + ++A +E +F + + K + RS + N+
Sbjct: 146 LTLALQ------TDHDH---KAVGVDCEHLSAQIEECIFLDVGNTDMKYKNRVRSRISNL 196
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 197 KDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 256
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F CS C K NC+Y Q+QTRS+DEPMTTYV C EC RWK
Sbjct: 257 DLFTCSKCKKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWK 297
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 12 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 70
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 71 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 126
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 127 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 173
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 174 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 233
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 234 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 285
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEMRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 160/300 (53%), Gaps = 25/300 (8%)
Query: 25 SEPEVQRCA---DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIW 80
S+P+V A D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ W
Sbjct: 111 SDPDVGPVAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSW 170
Query: 81 KQKIVLGKETNGNKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIR 133
K K++ G T+ + S+ S + + + +S + + + + A++ ++ R
Sbjct: 171 K-KLLDGPSTDKDTEEKKKEPLITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPR 229
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
PS +D + R+ + L +A AD+EE+ + +E ++++
Sbjct: 230 APSTSDSVRLKCREMLAAALRTGDDYIAI-GADEEEL------------GSQIEEAIYQE 276
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEE 253
+R + K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ +
Sbjct: 277 IRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKN 336
Query: 254 IKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + + + ++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 337 LTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 396
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 158/297 (53%), Gaps = 34/297 (11%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVLGKETNG 92
D LK L+A P+T +LL ST++G S+ ++K + +V + A L+ WK+ +L + G
Sbjct: 30 DLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKALIKSWKK--LLDEPGGG 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVK--SGCSTAKEKKATASIRK------PS-------- 136
+K S++EK ++ ++ ++ V G +E+ +S + PS
Sbjct: 88 DK------SLEEKRKESSTPTSLVSPTQGSPEPREESNDSSSKNEPVDVMPSISLISTFP 141
Query: 137 HADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRP 196
A DS+R K R+ L +AL +A DD D Q+AA +E +F + +
Sbjct: 142 QAPSTSDSVRIKCREMLSQAL-----QAGDDYIAI----GADCDQLAAQIEEYIFCEFKN 192
Query: 197 MGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKA 256
K + RS + N+ D KNP+LR+ VL G V+P+R+A MT +E+ASDE + + +
Sbjct: 193 TDPKYKNRVRSRIANLKDIKNPNLRKSVLCGNVSPDRMAKMTAQEMASDELKLIRKNLTK 252
Query: 257 KFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + +V + TD F C C K C+Y Q+QTRSADEPMTT+V C +C RWK
Sbjct: 253 EAIRDHQVSQTGGTQTDLFTCGKCKKKRCTYTQVQTRSADEPMTTFVFCNDCGNRWK 309
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 147/282 (52%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 29 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 87
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+R G+ L + + D + + A +T I D++R+K R+
Sbjct: 88 RERGRGTPLPTSSRDASEAPDPSRKRPELPRAP---STPRITTFPPVPVTCDAVRNKCRE 144
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + D ++++A +E +F + + K + RS + N
Sbjct: 145 MLTAALQ------TDHDHV---AIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISN 195
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 196 LKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 255
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 256 TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 145/283 (51%), Gaps = 17/283 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 29 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 87
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEK-KATASIRKPSHADQAKDSMRDKIR 150
+R G+ L + + D + + A + T P D ++ R+ +
Sbjct: 88 RERGRGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLT 147
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
L+ A VA A D ++++A +E +F + + K + RS +
Sbjct: 148 AALQTAHDHVAIGA-------------DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRIS 194
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D +NPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 195 NLKDARNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGT 254
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 255 QTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 145/283 (51%), Gaps = 17/283 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 5 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 63
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEK-KATASIRKPSHADQAKDSMRDKIR 150
+R G+ L + + D + + A + T P D ++ R+ +
Sbjct: 64 RERGRGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLT 123
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
L+ A VA A D ++++A +E +F + + K + RS +
Sbjct: 124 AALQTAHDHVAIGA-------------DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRIS 170
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D +NPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 171 NLKDARNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGT 230
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 231 QTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 273
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 153/287 (53%), Gaps = 21/287 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ L+K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRNG------SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMR 146
+ S + E ++ +S + + + + A++ ++ R PS +D + R
Sbjct: 85 DPEEKKKEPAISSQNSPEAREESSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCR 144
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
+ + L VA AD+EE+ + +E +++++R + K + R
Sbjct: 145 EMLAAALRTGDDYVAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRVR 191
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ +
Sbjct: 192 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAK 251
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 252 TGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 298
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 40 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 98
Query: 93 N----KRNG---SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ K++ S+ S + + + +S + + + + A++ ++ R PS +D +
Sbjct: 99 DPEEKKKDAAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKC 158
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L VA AD+EE+ + +E +++++R + K +
Sbjct: 159 REMLAAALRTGDDYVAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRV 205
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 206 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 265
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 266 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 313
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYLSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 158/293 (53%), Gaps = 31/293 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 28 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 86
Query: 93 NKR-------NGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI-RKPSHADQAKDS 144
+ + S+ S D + + +S +++ + +A S R PS +D S
Sbjct: 87 DSEEKKKEPASSSQNSPDAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSD----S 142
Query: 145 MRDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
+R K R+ L AL R + AD+EE+ + +E +F++L+ +
Sbjct: 143 VRVKCREMLSAAL-RTGDDYIAIGADEEEL------------GSLIEEAIFQELKNTDMK 189
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
K + RS + N+ D KNP+LR+ VL G + P++ A MT EE+ASDE ++ + + + +
Sbjct: 190 YKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEAIR 249
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 250 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 302
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 21/287 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+ V + A L+ WK K++ G +
Sbjct: 30 DLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEEVTSLAKSLIKSWK-KLLDGPSADM 88
Query: 93 NKRN----GSKLSVDEKFQKQTSDSN--AVKSGCSTAKEKKATASIRKPSHADQAKDSMR 146
++ + E ++ +S +N A K C + T+ R PS +D S+R
Sbjct: 89 EEKRKDQPAPAQNSPEAREESSSSTNISARKEECPAPSDGFITSFPRAPSTSD----SVR 144
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
K R+ L AL D+ I D ++ A +E +F++ + K + R
Sbjct: 145 IKCRELLATALK------TGDDHI---AIGADVDELGAQIEEAVFQEFKNTEAKYKNRIR 195
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+ D KNP+LRR VL G + P+ A M+ EE+ASDE ++ + + + + + ++
Sbjct: 196 SRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKEAIREHQMAR 255
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 256 TGGTETDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVFCNECGNRWK 302
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 28/291 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 85 DPEEKKKDTAITSQNSPEAREESSSSGNISSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
R K R+ L AL + AD+EE+ + +E +++++R + K
Sbjct: 141 RLKCREMLAAALRTGDDYVAIGADEEEL------------GSQIEEAIYQEIRNTDMKYK 188
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 189 NRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREH 248
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 15 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 73
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 74 DPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSD----SV 129
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 130 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 176
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 177 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 236
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 237 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 288
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 21/287 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 93 NKRNGSKLSV------DEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMR 146
+ K E ++ +S + + + + A++ ++ R PS +D + R
Sbjct: 85 DPEEKKKEPAITSQNSPEAREESSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVRLKCR 144
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
+ + L VA AD+EE+ + +E +++++R + K + R
Sbjct: 145 EMLAAALRTGDDYVAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRVR 191
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ +
Sbjct: 192 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAK 251
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 252 TGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 298
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 85 DSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 150/287 (52%), Gaps = 21/287 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T +LL ST++G S+ ++K E+ V + A L+ WK K++ G +
Sbjct: 29 DLLKELKSLPMTLELLQSTRIGMSVNAIRKQSGEEDVTSLAKSLIKSWK-KLLDGPSADL 87
Query: 93 NKRN----GSKLSVDEKFQKQTSDSN--AVKSGCSTAKEKKATASIRKPSHADQAKDSMR 146
++ + E ++ +S +N +K C + T+ R PS +D S+R
Sbjct: 88 EEKKKDQPAPAQNSPEAREESSSSTNFGVLKEECPAPSDDFITSFPRAPSTSD----SVR 143
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
K R+ L VA + DD D ++ A +E +F++ + K + R
Sbjct: 144 IKCRE-----LLAVALKTGDDHVAI----GADVDELGAQIEEAVFQEFKNTDAKYKNRIR 194
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+ D KNP+LRR VL G + P+ A M+ EE+ASDE ++ + + + + + ++
Sbjct: 195 SRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKEAIREHQMAR 254
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRSADEPMTT+V C C RWK
Sbjct: 255 TGGTETDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVFCNNCGNRWK 301
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAV-KSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N + A++ ++ R PS +D S+
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDERNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 142/281 (50%), Gaps = 18/281 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P++ +LL ST++G S+ ++K E+V + A L+ WK+ + T G
Sbjct: 30 DLLKELRNIPMSLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLAFPPNTVG 89
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
KR+ T S++ S S E + I A DS+R K R+
Sbjct: 90 KKRSPVVFG--------TCSSSSNFSSRSDTTEVAPNSLIHNFPRAPSTSDSIRLKCREM 141
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL A D +++ A +E +F++ + + K + RS + N+
Sbjct: 142 LANALQTGEDYIA---------IGADCEELGAQIEECIFQEFKNTDMKYKNRVRSRISNL 192
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP+LRR VL G V+PER+A MT EE+ASDE ++ + + + + ++ T
Sbjct: 193 KDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDELKEMRKNLTKEAVRDHQMATTGGTQT 252
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F C C C+Y Q+QTRSADEPMTT+V C +C RWK
Sbjct: 253 DLFTCGKCKGKCCTYTQVQTRSADEPMTTFVFCNQCGNRWK 293
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T
Sbjct: 15 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 73
Query: 93 NKRNGSKL-SVDEKFQKQTSDSNAVKSGCSTAK-EKKATASIRKPSH--ADQAKDSMRDK 148
K SV + + + ++ S S K E A++ PS A DS+R K
Sbjct: 74 ESEEKKKEPSVSSQNSPEAREESSSSSHTSNRKDEANASSDSFIPSFPRAPSTSDSVRVK 133
Query: 149 IRKDLEKALSR---VASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ L AL + ADDEE+ + +E ++++LR + K +
Sbjct: 134 CREMLAAALKTGDDYIAIGADDEEL------------GSQIEEAIYQELRNTDMKYKNRV 181
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 182 RSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 241
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 242 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 289
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 29 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 87
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+R G L + + D + + A +T I D++R+K R+
Sbjct: 88 RERGRGMPLPTSSRDASEAPDPSRKRPELPRAP---STPRITTFPPVPVTCDAVRNKCRE 144
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + D ++++A +E +F + + K + RS + N
Sbjct: 145 MLTAALQ------TDHDHV---AIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISN 195
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 196 LKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 255
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 256 TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 74 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 132
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATAS---IRKPSHADQAKDSMRDKI 149
+ K S + + S ++ ++++ AS I A DS+R K
Sbjct: 133 DSDEKKKESAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSDSVRMKC 192
Query: 150 RKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ L AL R + AD+EE+ + +E ++++LR + K +
Sbjct: 193 REMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQELRNTDMKYKNRV 239
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 240 RSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 299
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 300 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 347
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 29 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 87
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+R G L + + D + + A +T I D++R+K R+
Sbjct: 88 RERGRGMPLPTSSRDASEAPDPSRKRPELPRAP---STPRITTFPPVPVTCDAVRNKCRE 144
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + D ++++A +E +F + + K + RS + N
Sbjct: 145 MLTAALQ------TDHDHV---AIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISN 195
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 196 LKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 255
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 256 TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 151/305 (49%), Gaps = 32/305 (10%)
Query: 10 GAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-K 68
G AK A+D + +++ D LK LQ P+T ++L T +G ++ L+K + +
Sbjct: 13 GLAKMASDGSGGQSQA-------LDMLKQLQRLPITLEILQKTHIGLTVNTLRKSSQDDE 65
Query: 69 VQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKA 128
V A L+ WK+ I GS + E + S N KS ST +
Sbjct: 66 VILLAKTLVKNWKKLI------------GSTPTRAEDSSSRESRENK-KS--STTPPARP 110
Query: 129 TASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVER 188
+ + A D++R K R+ L AL + D A DP ++A +E
Sbjct: 111 VPAKQTSFPAGNTTDAVRLKCREMLSNALK--------GNGLPDGCAA-DPDELAERIES 161
Query: 189 VMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERR 248
F++ + + RS + N+ D KNP+LR VLIG + PERLA MT EE+ASDE +
Sbjct: 162 TCFDEFNNTDTKYRSRIRSRVANLKDPKNPNLRLGVLIGSIKPERLAKMTAEEMASDELK 221
Query: 249 QENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAEC 308
Q +++ + + ++ TD KC C KSNC+Y+Q+QTRSADEPMTT+ C EC
Sbjct: 222 QLRQKLTKEAIDDHQMALTSGTKTDLLKCGKCKKSNCTYNQVQTRSADEPMTTFAFCNEC 281
Query: 309 NKRWK 313
RWK
Sbjct: 282 GNRWK 286
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 153/297 (51%), Gaps = 34/297 (11%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T +LL ST++G S+ ++K E+V + A L+ WK+ +L + G
Sbjct: 30 DLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKK--LLDEPGAG 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKK----------------ATASIRKPS 136
+K + +EK ++Q++ + G AKE+ + I
Sbjct: 88 DK------ASEEKRKEQSTPVVSPSQGSPEAKEESSSSSNSSSKSEPSEVASNTLINTFP 141
Query: 137 HADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRP 196
A DS+R K R+ L AL + DD D ++ A +E +F++ +
Sbjct: 142 RAPSTSDSIRIKCREMLASAL-----QTGDDYIAI----GADCDELGAQIEECIFQEFKN 192
Query: 197 MGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKA 256
+ K + RS + N+ D KNP+LRR VL G VTPER+A MT EE+ASDE ++ + +
Sbjct: 193 TDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMTAEEMASDELKEMRKNLTK 252
Query: 257 KFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD F C C +C+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 253 EAVRDHQMATTGGTQTDLFTCGKCKGKSCTYTQVQTRSADEPMTTFVFCNECGNRWK 309
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 2 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 60
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+R G L + + D + + A +T I D++R+K R+
Sbjct: 61 RERGRGMPLPTSSRDASEAPDPSRKRPELPRAP---STPRITTFPPVPVTCDAVRNKCRE 117
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + D ++++A +E +F + + K + RS + N
Sbjct: 118 MLTAALQ------TDHDHV---AIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISN 168
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 169 LKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 228
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 229 TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 270
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 48 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 106
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAV-KSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N + A++ ++ R PS +D S+
Sbjct: 107 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDERNARDTYVSSFPRAPSTSD----SV 162
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 163 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 209
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 210 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 269
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 270 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 321
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 158/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G ++
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSSDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + K + +S + + + + A++ ++ R PS +D S+
Sbjct: 85 DPEEKKKEPAITSQNSPEAKEESSSSGTISSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D +
Sbjct: 85 DPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKC 144
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L VA AD+EE+ + +E +++++R + K +
Sbjct: 145 REMLAAALRTGDDYVAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRV 191
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 192 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 251
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 252 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 157/291 (53%), Gaps = 28/291 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ L+K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWK-KLLNGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 85 DPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
R K R+ L AL + AD+EE+ + +E +++++R + K
Sbjct: 141 RLKCREMLAAALRTGDDYVAIGADEEEL------------GSQIEEAIYQEIRNTDMKYK 188
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 189 NRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREH 248
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 154/289 (53%), Gaps = 23/289 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL +T++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 28 DLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 86
Query: 93 N----KRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDK 148
+ K+ + S + ++ S S++ S + + I A DS+R K
Sbjct: 87 DSEEKKKEPASSSQNSPEAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSDSVRVK 146
Query: 149 IRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK 204
R+ L AL R + AD+EE+ + +E +F++L+ + K +
Sbjct: 147 CREMLSAAL-RTGDDYIAIGADEEEL------------GSQIEEAIFQELKNTDMKYKNR 193
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
RS + N+ D KNP+LR+ VL G + P++ A MT EE+ASDE ++ + + + + + ++
Sbjct: 194 VRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEAIREHQM 253
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 254 AKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 302
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 159/292 (54%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ L+K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 89 ETNGNKRNG---SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+T K++ S+ S + + + +S + + + + ++ + R PS +D S+
Sbjct: 85 DTEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNVRDTYVSCFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 157/291 (53%), Gaps = 28/291 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ L+K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 85 DPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
R K R+ L AL + AD+EE+ + +E +++++R + K
Sbjct: 141 RLKCREMLAAALRTGDDYVAIGADEEEL------------GSQIEEAIYQEIRNTDMKYK 188
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 189 NRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREH 248
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRNGSK-LSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH--ADQAKDSMRDKI 149
+ K ++ + + + ++ S S KE+ + PS A DS+R K
Sbjct: 85 DSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSDSVRMKC 144
Query: 150 RKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ L AL R + AD+EE+ + +E ++++LR + K +
Sbjct: 145 REMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQELRNTDMKYKNRV 191
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 192 RSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 251
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 252 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 157/292 (53%), Gaps = 30/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ SDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMPSDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 HQMSKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 148/290 (51%), Gaps = 27/290 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRNGSKLSVDEKFQKQTS---------DSNAVKSGCSTAKEKKATASIRKPSHADQAKD 143
+ K D Q S + + A++ ++ R PS +D +
Sbjct: 85 DSEEKKK---DTAITSQNSPEAREESSSGHGSSRKDEPNARDTYVSSFPRAPSTSDSVRL 141
Query: 144 SMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR 203
R+ + L +A AD+EE+ + +E +++++R + K
Sbjct: 142 KCREMLAAALRTGEDYIAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKN 188
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
+ RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + +
Sbjct: 189 RVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQ 248
Query: 264 VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 MAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 298
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 24/292 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKI---VLGKE 89
D LK L++ P+T +LL ST++G S+ ++K E+V + A L+ WK+ + G++
Sbjct: 30 DLLKELRSVPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDEPGSGEK 89
Query: 90 TNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAK--------EKKATASIRKPSHADQA 141
T+ KR + Q+ +A + CS++ + + + A
Sbjct: 90 TSEEKRKEQSTPIISSSQES---PDAREESCSSSNTNSRSEPLDDTPGSFVNAFPRAAST 146
Query: 142 KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
D +R K R+ L AL + DD D ++ A +E +F++ + +
Sbjct: 147 SDPIRVKCREMLANAL-----QTGDDYIAI----GADCDELGAQIEDFIFQEFKNTDMKY 197
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LRR VL G +TPER+A MT EE+ASDE ++ + + + +
Sbjct: 198 KNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAKMTAEEMASDELKEIRKNLTKEAVRD 257
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD F C C NC+Y Q+QTRSADEPMTT+V C C RWK
Sbjct: 258 HQMATTGGTQTDLFTCGKCKGKNCTYTQVQTRSADEPMTTFVFCNGCGNRWK 309
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 145/282 (51%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK K++ +
Sbjct: 2 DLLRELKAMPITLHLLQSTRVGMSVNTLRKQSSDEEVIALAKSLIKSWK-KLLDASDAKA 60
Query: 93 NKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+R G L + + D + + A +T I D++R+K R+
Sbjct: 61 RERGRGMPLPTSSRDASEAPDPSRKRPELPRAP---STPRITTFPPVPVTCDAVRNKCRE 117
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + D +++A +E +F + + K + RS + N
Sbjct: 118 MLTAALQ------TDHDHV---AIGADCVRLSAQIEECIFRDVGNTDMKYKNRVRSRISN 168
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 169 LKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 228
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 229 TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 270
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 140/281 (49%), Gaps = 12/281 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A PVT LL ST+VG S+ L+K E+V A L+ WK+ +
Sbjct: 29 DLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLDASDAKAR 88
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+R G L K+ S++ +T I D++R K R+
Sbjct: 89 ERRRGGSLPTSS--SKEASEAQDPSRKRPELPRMPSTPRITTFPPVPVTCDAVRTKCREM 146
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + D + +A +E +F + + K + RS + N+
Sbjct: 147 LTAALQ------TDHDHV---AIGADCECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNL 197
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LRR+VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 198 KDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 257
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 258 DLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 298
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRNGSK-LSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH--ADQAKDSMRDKI 149
+ K ++ + + + ++ S S KE+ + PS A DS+R K
Sbjct: 85 DSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETDASDSFIPSFPRAPSTSDSVRMKC 144
Query: 150 RKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ L AL R + AD+EE+ + +E ++++LR + K +
Sbjct: 145 REMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQELRNTDMKYKNRV 191
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 192 RSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEIRKNLTKEAIREHQMA 251
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 252 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 157/288 (54%), Gaps = 15/288 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 71 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 129
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D +
Sbjct: 130 DPEEKKKDTAVTSQNSPEAREESSSSGNISSRKEEANARDTYVSSFPRAPSTSDSVRLKC 189
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L VA AD+EE+ +++ + SV +++++R + K +
Sbjct: 190 REMLAAALRTGDDYVAI-GADEEELGSQIE-----EDILSVLVPIYQEIRNTDMKYKNRV 243
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 244 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 303
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 304 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 351
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 147/286 (51%), Gaps = 25/286 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+ D L T++G S+ +++K ++V AA +L+ WK+ +
Sbjct: 30 DVLKALKQIPINLDTLQKTRIGMSVNNIRKQTANDEVAIAAKQLIKGWKKLV-------S 82
Query: 93 NKRNGSKLSVDEKFQKQTSD--SNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIR 150
+ SK S D K +++ S ++ +T E A++ S +S+RDK R
Sbjct: 83 EPSSASKKSEDNKKKEKPEPIISTNIRKTSTTKMEVSASSHTMDTSSLQSTGNSVRDKCR 142
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQ---VAASVERVMFEKLRPMGVAEKRKHRS 207
+ L + L TD +Q +AA++E ++ + + GV K + RS
Sbjct: 143 EMLVRGLQ------------TDNTSGHSDQQCAFLAAAIEEAIYSEFKDTGVKYKNRIRS 190
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
N+ D +N LR VL G + PE++A MT EE+ASDE +++ EE + + + ++
Sbjct: 191 RFSNLKDTRNSILRLNVLNGILKPEQIAKMTAEEMASDEMKKKREEYEQQNIKDHQMSVN 250
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C C+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 251 EGTKTDMFVCGRCKGRACTYNQLQTRSADEPMTTFVFCTECGNRWK 296
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 142/281 (50%), Gaps = 21/281 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L + +L ST+VG ++ +L+K E+ V A L+ WK+ + N
Sbjct: 29 DLLKVLGRLKINLTILTSTRVGMTVNNLRKTSKEEEVVTVAKSLIKTWKKFV----PENS 84
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+K+ +K +SNA +G S + +K + D +R + R+
Sbjct: 85 DKKKKDSEEESKKSPHSKEESNAKSNGLSKSFPQKTNIA---------TTDDVRLRCREM 135
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL + S+ D + P+++A +E +F + K + RS +FN+
Sbjct: 136 LTNALKGIGSDLPDG-------ICKSPEELADLIEEAIFSNFKSTSAKYKNQIRSRVFNL 188
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D+KNP LR VL G + P + A MT +E+AS+E +++ + + + ++ + + T
Sbjct: 189 KDKKNPALRENVLTGIIEPSKFAVMTADEMASNEVKKQRADFVKQGIDASQLAQIQGTKT 248
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 DLLKCGKCLKRNCTYNQIQTRSADEPMTTFVLCNECGNRWK 289
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 156/291 (53%), Gaps = 28/291 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + A++ ++ R PS +D S+
Sbjct: 85 DSEEKKKEPAISSQNSPEAREESSSSSHVSSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
R K R+ L AL + AD+EE+ + +E +++++R + K
Sbjct: 141 RLKCREMLAAALRTGDDYVAIGADEEEL------------GSQIEEAIYQEIRNTDMKYK 188
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 189 NRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREH 248
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ L+K E+V + A L+ WK K++ G T+
Sbjct: 37 DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 95
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D +
Sbjct: 96 DPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKC 155
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L VA AD+EE+ + +E +++++R + K +
Sbjct: 156 REMLAAALRTGDDYVAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRV 202
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 203 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 262
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 263 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 310
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 91 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 149
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D +
Sbjct: 150 DPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKC 209
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L +A AD+EE+ + +E +++++R + K +
Sbjct: 210 REMLAAALRTGDDYIAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRV 256
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 257 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 316
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 317 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 364
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 151/283 (53%), Gaps = 15/283 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ ++ + L ST++G S+ ++K E+VQ A L+ WK K++ G E
Sbjct: 28 DLLQELKNMKMSLETLQSTRIGMSVNAVRKQSSDEEVQTLAKSLIKAWK-KLLDGSEGKP 86
Query: 93 NKRNG-SKLSVDEKFQKQTSD-SNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIR 150
++ G S L +SD SN ++ + ++ P A DS+R K R
Sbjct: 87 EEKKGESPLQSSSSKDPGSSDTSNKPETPKTPTTPVTPKFTMFPP--APVTTDSVRTKCR 144
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
+ L AL D + I D + +AA +E ++++ + + K + RS +
Sbjct: 145 ELLVAALQT----DGDHQTI-----GADCEHMAAQIEDYIYQEFKSTDMKYKTRLRSRIS 195
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D+KNPDLRR VL G ++PER+A+MT EE+AS E ++ + + + + + ++ +
Sbjct: 196 NLKDQKNPDLRRNVLCGNISPERIASMTAEEMASPELKEIRKALTKESIREHQLSKVGGT 255
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 256 ETDMFVCGKCKGKNCTYTQVQTRSADEPMTTFVLCNECGNRWK 298
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 153/287 (53%), Gaps = 20/287 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRNGSK-LSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH--ADQAKDSMRDKI 149
+ K ++ + + + ++ S S KE+ + PS A DS+R K
Sbjct: 85 DSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSDSVRMKC 144
Query: 150 RKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
R+ L AL + AD+EE+ + +E ++++LR + K + R
Sbjct: 145 REMLAAALRTGDDYIAIGADEEEL------------GSQIEEAIYQELRNTDMKYKNRVR 192
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+ D KNP+LR+ VL G + P+ A +T EE+ASDE ++ + + + + + ++ +
Sbjct: 193 SRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASDELKEMRKNLTKEAIREHQMAK 252
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 253 TGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 147/282 (52%), Gaps = 14/282 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ P+T LL ST+VG S+ L+K E++ A L+ WK+ + + +
Sbjct: 28 DLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSR 87
Query: 93 NKRNGSKL-SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
N+ G+ L + K +T+D + K +T I D++R+K R+
Sbjct: 88 NQGRGTPLPTSSSKDASRTTDLSCKKPD---PPRTPSTPRITTFPQVPITCDAVRNKCRE 144
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + V + +++ +E +F + + K + RS + N
Sbjct: 145 MLTLALQ------TDHDHVAVGVNC---EHLSSQIEECIFLDVGNTDMKYKNRVRSRISN 195
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNP LRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 196 LKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 255
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C+ C K NC+Y Q+QTRS+DEPMTTYV C EC RWK
Sbjct: 256 TDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWK 297
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A PVT LL ST+VG S+ L+K E+V A L+ WK+ +
Sbjct: 65 DLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLDASDAKAR 124
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+R G L K+ S++ +T I D++R K R+
Sbjct: 125 ERRRGGSLPTSS--SKEASEAQDPSRKRPELPRMPSTPRITTFPPVPVTCDAVRTKCREM 182
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + D + +A +E +F + + K + RS + N+
Sbjct: 183 LTAALQ------TDHDHV---AIGADCECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNL 233
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 234 KDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 293
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 294 DLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 334
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 147/282 (52%), Gaps = 14/282 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ P+T LL ST+VG S+ L+K E++ A L+ WK+ + + +
Sbjct: 2 DLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSR 61
Query: 93 NKRNGSKL-SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
N+ G+ L + K +T+D + K +T I D++R+K R+
Sbjct: 62 NQGRGTPLPTSSSKDASRTTDLSCKKPD---PPRTPSTPRITTFPQVPITCDAVRNKCRE 118
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + V + +++ +E +F + + K + RS + N
Sbjct: 119 MLTLALQ------TDHDHVAVGVNC---EHLSSQIEECIFLDVGNADMKYKNRVRSRISN 169
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNP LRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 170 LKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 229
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C+ C K NC+Y Q+QTRS+DEPMTTYV C EC RWK
Sbjct: 230 TDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWK 271
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K K+RS++FN+ D NPDLRRRVL GE+T + L ++ EELASD R+ EN +I+ +F+
Sbjct: 13 KAKYRSLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAEELASDARKSENAQIRKTALFE 72
Query: 262 CEVPEK-KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E + KK TTDQF+C C + C Y+QMQTRSADEPMTT+VTC C RWK
Sbjct: 73 AERGQHMKKATTDQFQCGKCKQRKCQYYQMQTRSADEPMTTFVTCTNCGNRWK 125
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 18/289 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKI---VLGKE 89
D LK L++ P+T +LL ST++G S+ ++K E+V + A L+ WK+ + G++
Sbjct: 30 DLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDEPGGGEK 89
Query: 90 TNGNKRNGSKLSVDEKFQ-----KQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDS 144
T+ KR V Q ++ S S++ + S + ++ + A D
Sbjct: 90 TSEEKRKEQSTPVISSSQESPEAREESCSSSNNNSRSEPSDDTPSSFVNTFPRAASTSDP 149
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK 204
+R K R+ L AL + DD D ++ A +E +F+ + + K +
Sbjct: 150 IRVKCREMLANAL-----QTGDDYIAI----GADCDELGAQIEDFIFQVFKNTDMKYKNR 200
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
RS + N+ D KNP+LRR VL G +TPER+A MT EE+ASDE ++ + + + + ++
Sbjct: 201 VRSRISNLKDVKNPNLRRTVLCGSITPERMAKMTAEEMASDELKEIRKNLTKEAVRDHQM 260
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C NC+Y Q+QTRSADEPMTT+V C+ C RWK
Sbjct: 261 ATTGGTQTDLFTCGKCKGKNCTYTQVQTRSADEPMTTFVFCSGCGNRWK 309
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 152/287 (52%), Gaps = 19/287 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E++ + A L+ WK+ +L +N
Sbjct: 28 DLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEITSLAKSLIKSWKK--LLDGPSND 85
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH------ADQAKDSMR 146
+ K Q + ++ S S + KK ++I ++ A DS+R
Sbjct: 86 KESEEKKKESASSSQ-NSPEAREESSSSSNSNSKKEDSNISSDTYISSFPRAPSTSDSVR 144
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
K R+ L AL + DD D +++ + +E +F++L+ + K + R
Sbjct: 145 MKCREMLAAAL-----KTGDDYIAI----GADEEELGSQIEEAIFQELKNTDMKYKNRVR 195
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+ D KNP+LR+ VL G + P+R A MT EE+ASDE ++ + + + + + ++ +
Sbjct: 196 SRIANLKDTKNPNLRKNVLCGNILPDRFAKMTAEEMASDELKEMRKNLTKEAIREHQMAK 255
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 256 TGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 302
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 13/281 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK+ +
Sbjct: 29 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKVR 88
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+ + L + + D + + +T I D++R+K R+
Sbjct: 89 ERGRSTPLPTSSRDASEAQDPSRKRP---ELPRTPSTPRITTFPPVPVTCDAVRNKCREM 145
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + D K+++A +E +F + + K + RS + N+
Sbjct: 146 LAIALQ------TDHDHV---AIGADCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNL 196
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 197 KDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 256
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 257 DLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 155/288 (53%), Gaps = 21/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ L+K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D +
Sbjct: 85 DPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKC 144
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L VA AD+EE+ +++ E +++++R + K +
Sbjct: 145 REMLAAALRTGDDYVAI-GADEEELGSQIE-----------EVPIYQEIRNTDMKYKNRV 192
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 193 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 252
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 253 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 300
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 157/288 (54%), Gaps = 12/288 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 5 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 63
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D +
Sbjct: 64 DSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFPRAPSTSDSVRLKC 123
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L +A AD+EE+ +++ D V + + ++++R + K +
Sbjct: 124 REMLAAALRTGDDYIAI-GADEEELGSQIE-EDILCVYIHIVPI-YQEIRNTDMKYKNRV 180
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 181 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 240
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 241 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 288
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 123/203 (60%), Gaps = 26/203 (12%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
MEK+L+ LF A KKAADAAA + + E +RC DALK L+ FPVTY +LVSTQVGK LR
Sbjct: 1 MEKELLELFEATKKAADAAAVNSGAPSEEERCLDALKQLKDFPVTYQVLVSTQVGKRLRT 60
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGC 120
L KHP +K+Q AS+L+ IWK ++ +ET NK+NG D + K
Sbjct: 61 LTKHPTKKIQALASDLIDIWKNIVI--EETTKNKKNG-----------DLEDKESPKPVT 107
Query: 121 STAKEKKATASIRKPSH----------ADQAKDSMRDKIRKDLEKALSRVASEAADDEEI 170
+ + KAT + KPSH + D++RDK+R+ L +ALS+V EA DE+I
Sbjct: 108 ANPENVKATP-LLKPSHNIVGPPKLTSISKCNDALRDKVRELLSEALSKVVGEA--DEDI 164
Query: 171 TDRVKARDPKQVAASVERVMFEK 193
D V A DP +VA SVE VMFEK
Sbjct: 165 MDAVNACDPIRVAVSVESVMFEK 187
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 153/288 (53%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 84
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D +
Sbjct: 85 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVQLKC 144
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L +A AD+EE+ + +E +++++R + K +
Sbjct: 145 REMLAAALRTGDDYIAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRV 191
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 192 RSRISNLKDAKNPYLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKEAIREHQMA 251
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEP+TT+V C EC RWK
Sbjct: 252 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPVTTFVVCNECGNRWK 299
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 146/292 (50%), Gaps = 34/292 (11%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A PVT LL ST+VG S+ L+K E+V A L+ WK+ +
Sbjct: 29 DLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKAR 88
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK--------DS 144
+R G L +S A ++ S+ K + R PS D+
Sbjct: 89 EQRRGGPLPT-------SSSKEAAEAKDSSRKRPELP---RMPSAPRITTFPPVPVTCDA 138
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDR---VKARDPKQVAASVERVMFEKLRPMGVAE 201
+R+K R+ L AL TDR D + ++A +E +F + +
Sbjct: 139 VRNKCREMLTAALQ------------TDRDHMAVGADCEGLSAQIEECIFRDVGNTDMKY 186
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
+ + RS + N+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + +
Sbjct: 187 RNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKEAIRE 246
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD F C C + NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 247 HQMARTGGTQTDLFTCGKCRRKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 298
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 140/281 (49%), Gaps = 12/281 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A PVT LL ST+VG S+ L+K E V A L+ WK+ +
Sbjct: 37 DLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEGVIALAKSLIKSWKKLLDASDAKAR 96
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+R G L K++ ++ + I D++R+K R+
Sbjct: 97 EQRRGGPLPASS--SKESPEAQDPSRKRPELPRMPSAPRITTFPPVPVTCDAVRNKCREL 154
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + D + ++A +E +F + + K + RS + N+
Sbjct: 155 LTAALQ------TDHDHM---AVGADCEGLSAQIEECIFRDVGNTDMKYKNRVRSRISNL 205
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 206 KDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 265
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 266 DLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 306
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 27/291 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + A++ ++ R PS +D S+
Sbjct: 85 DSEEKKKEPAISSQNSPEAREESSSSSHVSSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
R K R+ L AL + AD+EE+ +++ E +++++R + K
Sbjct: 141 RLKCREMLAAALRTGDDYVAIGADEEELGSQIE-----------EVPIYQEIRNTDMKYK 189
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 190 NRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREH 249
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 250 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 300
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 169/333 (50%), Gaps = 37/333 (11%)
Query: 12 AKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQN 71
++A D+ AA + +AL L +T +LL T++G S+ L+ HP ++++
Sbjct: 91 GQQAGDSGAAVTPLSGVREDVVEALTILDRVDMTRELLAKTRIGVSVGKLRTHPDVQIRS 150
Query: 72 AASELLHIWKQKIVLG---KETNGNKRNGSKLSVDEKFQKQTSDSNAV---KSGCST--- 122
++L+H WK I K++ R G S K TS ++ K G S+
Sbjct: 151 RCTQLVHKWKAGISGSCSTKDSGTLSRPGQNGSGQGKSHTGTSANDKATDKKHGLSSQPS 210
Query: 123 -------------AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
A EK +T++ P A + D++RD+ R L +AL V + +
Sbjct: 211 VQGNGVQGVPGDKAPEKISTSAEDYPGPA--SGDAVRDRARGFLWRAL--VDGMQSGRDL 266
Query: 170 ITDRVKARDPKQVAASVERVMFEKL---RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLI 226
DR + + +VAA +E+ ++++ R + +++ +N +D+KNPDL +VL
Sbjct: 267 GADR--SGETARVAAEIEKALWQEYCVKRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLC 324
Query: 227 GEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGTTD--QFKCSGC 280
G TPE+LATM +LASDE+++ E K + M C E+ + +G TD QF C C
Sbjct: 325 GVYTPEQLATMNSADLASDEKKRMRELQKKESMEACQSDWEMKKLMEGGTDGGQFPCFKC 384
Query: 281 GKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ Y QMQTRS+DEPMTT+VTC EC RWK
Sbjct: 385 RTTKTVYFQMQTRSSDEPMTTFVTCLECGNRWK 417
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHL-KKHPCEKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ + K+ E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAICKQSTNEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + K + +S + + + + A + + R PS +D
Sbjct: 85 DSDEKKKEPAISSQNSPEAKEESSSSSNGSNRKEETNASDSFIPSFPRAPSTSDSVPMRC 144
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R + L +A AD+EE+ + +E ++++LR + K +
Sbjct: 145 RGMLAAALRTGDDYIAI-GADEEEL------------GSQIEEAIYQELRNTDMKYKNRV 191
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ ++ + + + + ++
Sbjct: 192 RSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMHKNLTKEAIREHQMA 251
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 252 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ P+T LL ST+VG S+ L+K E++ A L+ WK+ + + +
Sbjct: 28 DLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSR 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
++ G+ L K S + + +T I D++R+K R+
Sbjct: 88 DQGRGTPLPTSS--SKDASGTTDLSCKKPDPPRTSSTPRITTFPQVPITCDAVRNKCREM 145
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + V + +++ +E +F + + K + RS + N+
Sbjct: 146 LTLALQ------TDHDHVAVGVSC---EHLSSQIEECIFLDVGNTDMKYKNRVRSRISNL 196
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 197 KDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 256
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F C+ C K NC+Y Q+QTRS+DEPMTTYV C EC RWK
Sbjct: 257 DLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWK 297
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 160/292 (54%), Gaps = 20/292 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 28 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 86
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 87 DSEEKKKDTAVTSQNSPEAREESSSSGNTSSRKDETNARDTYVSSFPRAPSTSD----SV 142
Query: 146 RDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERV-MFEKLRPMGVAE 201
R K R+ L AL + AD+EE+ ++ + + + V +++++R +
Sbjct: 143 RLKCREMLAAALRTGDDYIAIGADEEELGSQI---EEDILCVYIHNVPIYQEIRNTDMKY 199
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + +S + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 200 KNRIQSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 259
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 260 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 311
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 153/295 (51%), Gaps = 30/295 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
+ LK LQ PV +LL T++G ++ L+K E+V + + L+ WK K + G +
Sbjct: 30 ELLKILQKLPVNLELLTKTRIGMTVNALRKSSKDEEVISLSKTLIKNWK-KFLSGSKEKD 88
Query: 93 NKRNGSKLSV-----------DEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH---A 138
+ + S D+K +K T+D+ VK KE+K I++ A
Sbjct: 89 STSSSSSKKKDEKSDKGKEENDQKKEKDTTDAADVK-----VKEEKPNKDIQRKQATFPA 143
Query: 139 DQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMG 198
D++R K R+ L AL RV + D P+++A +E ++ + +
Sbjct: 144 PTTTDAVRLKCRELLIAAL-RVDGKVIDS--------CASPEELAEELEEAIYGEFKNTD 194
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
K + RS + N+ D KNP+LR L+G +TP RLA MT EE+ASDE +Q E+ K +
Sbjct: 195 NRYKNRVRSRIANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEA 254
Query: 259 MFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 255 INDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 309
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 151/291 (51%), Gaps = 22/291 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G
Sbjct: 5 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGP---S 60
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGC----------STAKEKKATASIRKPSHADQAK 142
N R+ + + Q S +S + A++ ++ R PS +D +
Sbjct: 61 NDRDSEEKKKEPAITSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVR 120
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
R+ + L VA AD+EE+ +++ QV +++++R + K
Sbjct: 121 LKCREMLAAALRTGDDYVAI-GADEEELGSQIEEDILFQVP------IYQEIRNTDMKYK 173
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 174 NRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTREAIREH 233
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 234 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 284
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 148/293 (50%), Gaps = 33/293 (11%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+ V + A L+ WK+ +
Sbjct: 29 DLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEDVTSLAKALIKSWKKLL-------- 80
Query: 93 NKRNGSKLSVDEKFQKQTS---------DSNAVKSGCSTAKEKKATAS---IRKPSHADQ 140
+G ++EK + Q + + N+ + + K++ S I A
Sbjct: 81 ---DGPSADMEEKKKDQPAPAQNSPEPKEENSSSTNFAAQKDEFPAPSDGFITSFPKAPI 137
Query: 141 AKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
DS+R K R+ L AL D+ I + ++ A +E +F++ +
Sbjct: 138 TSDSVRIKCRELLAAALK------TGDDHI---AIGANVDELGAQIEDAVFQEFKNTEAK 188
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
K + RS + N+ D KNP+LRR VL G + P+ A MT EE+ASDE ++ + + + +
Sbjct: 189 YKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDFFARMTAEEMASDELKEMRKNLTKEAIR 248
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 EHQMAKTGGTETDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVFCNECGNRWK 301
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 142/283 (50%), Gaps = 17/283 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHL-KKHPCEKVQNAASELLHIWKQKIVLGKET-- 90
D LK L+ P+ +L ST++G ++ + KK ++V N L+ WK K++ G T
Sbjct: 29 DYLKALKDLPINLAVLTSTRIGMTVNAIRKKSENDEVNNLTKALIKKWK-KLLPGSATPK 87
Query: 91 NGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIR 150
G K G V EK K+ S K K ++ P+ DS+R K R
Sbjct: 88 EGTKEEGK---VSEK-TKEPSKETPSKESSKDKKGSSSSVQSSFPALPSTTTDSVRLKCR 143
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
+ L A+ DP+ +A +E ++++ R + K + RS +
Sbjct: 144 EMLCAAIKGDGVAVD---------GGGDPEYLAQMLEECIYKEFRNTDMKYKNRVRSRVS 194
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D +NP+LR L G+V+P RL+ MT EE+ASDE + ++ + + ++ +
Sbjct: 195 NLKDARNPNLRLNFLCGQVSPARLSNMTSEEMASDEMKNIRQKFTKESINDAQLATVQGT 254
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD KC CGK NC+Y+Q+QTRSADEPMTT+V C C RWK
Sbjct: 255 QTDLLKCGKCGKRNCTYNQVQTRSADEPMTTFVLCNACGNRWK 297
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 147/282 (52%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ P+T LL ST+VG S+ L+K E++ A L+ WK+ + + +
Sbjct: 28 DLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSR 87
Query: 93 NKRNGSKL-SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
N+ G+ L + K +T+D + K +T I D++R+K R+
Sbjct: 88 NQGRGTPLPTSSSKDASRTTDLSCKKPD---PPRTPSTPRITTFPQVPITCDAVRNKCRE 144
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AL D + + V + +++ +E + F + + K + RS + N
Sbjct: 145 MLTLALQ------TDHDHVAVGVNC---EHLSSQIEDI-FLDVGNTDMKYKNRVRSRISN 194
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNP LRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 195 LKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQ 254
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C+ C K NC+Y Q+QTRS+DEPMTTYV C EC RWK
Sbjct: 255 TDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWK 296
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK+ +L
Sbjct: 29 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKK--LLDVSDAK 86
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+ G ++ K S++ +T I +++R+K R+
Sbjct: 87 TRDRGRDTALPTSSTKNASEAMDPSRKRLELPRMPSTPRITTFPPVPITCNAVRNKCREM 146
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + D ++++A +E +F + + K + RS + N+
Sbjct: 147 LTTALQ------TDHDHV---AVGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNL 197
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP+LRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 198 KDAKNPELRRNVLCGTITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 257
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 258 DLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 298
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 138/301 (45%), Gaps = 45/301 (14%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ PV +LL T++G ++ L+K E+V + + L+ WK K + G
Sbjct: 32 LKTLQKLPVNLELLQKTRIGMTVNALRKSSKDEEVISLSKTLIKNWK-KFLSGT------ 84
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDS----MRDKIR 150
K T D N + ++ + + + DS DK+
Sbjct: 85 ------------HKDTKDGNTSSNNKKKDEKSEKSKEESELKKEKDVSDSRDTKTNDKVN 132
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVE------------------RVMFE 192
KDL K S S D R+K R+ A VE +F
Sbjct: 133 KDLNKKHSSFPSSTTTDAV---RLKCRELLASALQVEGNTIDGCASPEELAEELEEAIFG 189
Query: 193 KLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENE 252
+ + + + RS + N+ D KNP LR +IG +TP RLATMT EE+ASDE +Q E
Sbjct: 190 EFKNTDNKYRNRVRSRVANLRDSKNPTLRTNFIIGAITPGRLATMTAEEMASDEIKQLRE 249
Query: 253 EIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+ K + + ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RW
Sbjct: 250 QFKKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 309
Query: 313 K 313
K
Sbjct: 310 K 310
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 145/284 (51%), Gaps = 30/284 (10%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKL-SVD 103
T D++ +++G ++ ++ H +KV + A L+ WK ++ K+ + N SK S
Sbjct: 45 TEDVIRQSKIGVAVGKMRSHSDKKVADQAKSLVKDWKA--IVDKQRAQSSANSSKAPSST 102
Query: 104 EKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDS-------MRDKIRKDLEKA 156
TS + +G TA A+ PS A ++ S + DK+R K
Sbjct: 103 ASPAPTTSKPDGTINGNGTASASPAST----PSAAAKSTSSTKIDFEILNDKVRNACLKL 158
Query: 157 LSRVA-----SEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE--KRKHRSIM 209
L + S +D +I D A +VE + V + K RS+
Sbjct: 159 LYQSLEIGKESHVWNDSQIFD---------AAVAVEAAILSNQGKGSVTADYRNKVRSLS 209
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ D+ NPDLR RV+ G++ ++L TMT EELASD+R++E EE++ + +FK + ++
Sbjct: 210 LNIKDKNNPDLRVRVVEGDIAADKLVTMTNEELASDKRKREIEELQMQNLFKAKGAAAQE 269
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F+C C + Y+QMQTRSADEPMTT+VTC CN +WK
Sbjct: 270 AETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWK 313
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 142/293 (48%), Gaps = 31/293 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K + V + A L+ WK+ +L ++
Sbjct: 30 DLLKELKNLPMTLELLQSTRIGMSVNAIRKQSSDDDVASLAKSLIKSWKK--LLDGPSDD 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAV---------KSGCSTAKEKKATASIRKPSHADQAKD 143
+ K Q K C+ E T+ R PS +D
Sbjct: 88 KEPEEKKKEPLPPTQNSPEPREESSSSSNSSFRKDDCAVPPENFITSYPRAPSTSD---- 143
Query: 144 SMRDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
S+R K R+ L AL + ADDEE+ A +E +F++ +
Sbjct: 144 SVRIKCRELLSAALKTGDDYITIGADDEEL------------GAQIEEAVFQEFKNTDAK 191
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
K + RS + N+ D KNP+LRR VL G ++P A M+ EE+ASDE ++ + + + +
Sbjct: 192 YKNRVRSRIANLKDGKNPNLRRNVLCGNISPIVFAKMSAEEMASDELKEMRKNLTKEAIR 251
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD F C C NC+Y Q+QTRSADEPMTT+V C C RWK
Sbjct: 252 EHQMAKTGGTETDLFSCGKCKMKNCTYTQVQTRSADEPMTTFVFCNTCGNRWK 304
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 151/291 (51%), Gaps = 24/291 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T DLL ST++G S+ L+K E+V + A L+ WK+ + +E +
Sbjct: 5 DLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLDASEEKSE 64
Query: 93 NKRNGSKL---SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
K+ L S E + SN + T K T P D ++R+K
Sbjct: 65 EKKKSMSLPTSSSKETGNSRDQSSNKRQEPPKTPTTPKITTFPPAPVTCD----AVRNKC 120
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK-------LRPMGVAEK 202
R+ L AL ADD+ + D + +AA +E + ++ + K
Sbjct: 121 REMLTAALQ------ADDDYV---AIGADCEHIAAQIEEYILTNGASSRAYVKNTDMKYK 171
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+L++ VL G +TPE++A MT EE+AS+E ++ + + + + +
Sbjct: 172 NRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREH 231
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 232 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 282
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 139/282 (49%), Gaps = 15/282 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+V S++ L+K +K V A L+ WK+ +
Sbjct: 28 DLLRELKAIPITLQLLRSTRVFMSVKALQKQSSDKEVIALAKSLIKSWKKLLKTSDAKAS 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKS-GCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
N + L + K + +D + KS + TA + D + + +
Sbjct: 88 NFERDAPLPMSSKDASEVTDPSPKKSEQPRMPTTPRITAFLPGSVTCDAIRSKCCEMLTA 147
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L+K L VA A D + ++A +E +F + K + RS +FN
Sbjct: 148 ALQKDLDYVALGA-------------DCESLSAQIEESIFRDIGNTDGKYKNRVRSRIFN 194
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D KNPDLRR+VL G +TP+++A MT EE+ASDE ++ + + + + K +
Sbjct: 195 LRDAKNPDLRRKVLRGVITPQQIAVMTAEEMASDEMKEIRKAMTREAIRKHQKARTGGTQ 254
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD C C +C+Y Q QTRS+DEPMTT+V C EC RWK
Sbjct: 255 TDLITCGKCSGKSCTYTQAQTRSSDEPMTTFVLCNECGNRWK 296
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 51/321 (15%)
Query: 12 AKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQ 70
+K+ DAA A D L L+ P+ +L T++G ++ +K E +V
Sbjct: 19 SKETTDAAVAL-----------DMLNQLRKLPMNLQVLTKTKIGVTVNQFRKSVKEDEVV 67
Query: 71 NAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATA 130
N A ++ WK+ + +N N + GS S++ Q++ S+S K +
Sbjct: 68 NLAKSIIKGWKKFL-----SNDNNK-GSSSSLNPSAQEEDSNS------------KDSMP 109
Query: 131 SIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA-ADDEEITDRVKARD---------PK 180
+ P+ A+ S + D L R++S A DD R+K R+ P+
Sbjct: 110 ASEPPTPAES---STPPDLSSDAAPRLRRMSSSAEVDDTSDPVRIKCRELLTKALQTPPE 166
Query: 181 --------QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
++AA +E+ ++ + + + K + RS + N+ D KNP LR V+ G + PE
Sbjct: 167 KEGCAPACELAAGIEQSIYNEFKNTEMKYKTRVRSRVANLRDSKNPKLREGVMYGFIPPE 226
Query: 233 RLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQT 292
R+A+MT EE+ASD+ ++ E+ + + ++ ++ TD FKC CGK C Y+Q+QT
Sbjct: 227 RMASMTSEEMASDDLKKLREKFTKEAINDHQMAQQGGTETDFFKCGRCGKRRCQYNQVQT 286
Query: 293 RSADEPMTTYVTCAECNKRWK 313
RSADEPMTT+V C C RWK
Sbjct: 287 RSADEPMTTFVLCVSCGNRWK 307
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 144/292 (49%), Gaps = 24/292 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGK---- 88
D L+ L+A PVT LL ST+VG S+ L+K E+V A L+ WK+ + L
Sbjct: 5 DLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLALPSFLAP 64
Query: 89 ------ETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK 142
+ +R GS + K + D + + +T I
Sbjct: 65 VDASDAKARERRRGGSLPTSSSKEASEAQDPSRKRP---ELPRMPSTPRITTFPPVPVTC 121
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVER-VMFEKLRPMGVAE 201
D++R K R+ L AL D + + D + +A +E ++F + +
Sbjct: 122 DAVRTKCREMLTAALQ------TDHDHV---AIGADCECLAGQIEEYILFRDVGNTDMKY 172
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP LRR+VL G +TP+++A MT EE+ASDE ++ + + + + +
Sbjct: 173 KNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIRE 232
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 233 HQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 284
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 156/296 (52%), Gaps = 23/296 (7%)
Query: 26 EPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKI 84
E EV R A + + P+T +LL ST++G S+ ++K E+V + A L+ WK K+
Sbjct: 2 EDEVVRFAKKMDKMN-IPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KL 59
Query: 85 VLG----KETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSH 137
+ G K+ + K+ + S + E ++ TS N T A++ ++ R PS
Sbjct: 60 LDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPST 119
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
+D + R+ + L +A AD+EE+ + +E +++++R
Sbjct: 120 SDSVQLKCREMLAAALRTGDDYIAI-GADEEEL------------GSQIEEAIYQEIRNT 166
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
+ K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + +
Sbjct: 167 DMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKE 226
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ + TD F C C K NC+Y Q+QTRSADEP+TT+V C EC RWK
Sbjct: 227 AIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPVTTFVVCNECGNRWK 282
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 149/295 (50%), Gaps = 18/295 (6%)
Query: 25 SEPEVQRCA----DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHI 79
E E QR A D L+ L+A PVT LL ST+VG S+ L+K E+V A L+
Sbjct: 308 GETEAQRSAEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKS 367
Query: 80 WKQKI-VLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHA 138
WK+ + + +R G + K + D + + + I
Sbjct: 368 WKKLLDASDAKAREQRRAGPPPTSSSKEAPEAKDPSRKRP---ELPRVPSAPRITTFPPV 424
Query: 139 DQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMG 198
D++R+K R+ L AL D + + V A D + ++A +E +F +
Sbjct: 425 PVTCDAVRNKCREMLTAALQ------TDHDHMA--VGA-DCEGLSAQIEECIFRDVGNTD 475
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
+ K + RS + N+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + +
Sbjct: 476 MKYKNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKEA 535
Query: 259 MFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD F C C + NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 536 IREHQMARTGGTQTDLFTCGRCRRKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 590
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 146/296 (49%), Gaps = 17/296 (5%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQK 83
S E + D LK LQ PVT ++L T++G ++ L+K + +V + + L+ WK+
Sbjct: 2 STEEEDQALDLLKELQNLPVTLEILTKTRIGMTVNELRKSSSDDEVISLSKTLIKNWKKF 61
Query: 84 IVLGKETNGNK-----RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHA 138
+ T+ NK + + K +K + + T K+ + P
Sbjct: 62 LSNSSATSNNKDNNTNNTTATAANTPKLEKSKPVEDKSEEPKPTKKDDRKRHQTSFPPS- 120
Query: 139 DQAKDSMRDKIRKDLEKAL-SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
DS+R K R+ L A+ S+ D P+ +A +E +F + R
Sbjct: 121 -NTADSVRIKCRELLAAAIKGNTESDQVDG--------CGSPEDLAEELEEAIFNEFRNT 171
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
+ K + RS + N+ D KNP+LR LIG + RLA MT EELASDE +Q ++ K +
Sbjct: 172 DIKYKNRIRSRVANLKDPKNPNLRMNYLIGALPASRLAVMTAEELASDEMKQIRDKFKKE 231
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 232 AINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 287
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 143/277 (51%), Gaps = 22/277 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS-KLSVD 103
T DLL ST++G ++ L++H VQ A+EL+ W+ ++ K+ K++G+ K++ +
Sbjct: 42 TEDLLRSTRIGVTINRLRQHKDPAVQKLATELVSKWRDEV---KKKQQPKKDGAVKVAAN 98
Query: 104 EKFQKQTSDSN--AVKSGCSTAKEKKATASIRKPSHADQAKDSM-----RDKIRKDLEKA 156
+ V S AK+K + ++ D K + RD + +
Sbjct: 99 GGAASSPAPPASGTVSPAPSQAKKKHDVPADKRNHKTDNVKYQVTGSEARDACVRLMYDG 158
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ + SEA DE + VA VE + + A K K RS+ N+ +
Sbjct: 159 LAYM-SEAMPDEILL----------VAKQVEAAAYTNAGSVNDAYKAKMRSLFQNLKSKS 207
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
NP LR+RVLIGEV +R MT +E+ SDERR +E++KA+ M + V + +K + +F+
Sbjct: 208 NPALRKRVLIGEVPAKRFVVMTHDEMKSDERRALDEKLKAENMNEAMVAQVEKAISKEFQ 267
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CS C K SY Q QTRSADEPMTT+ C C RWK
Sbjct: 268 CSKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNRWK 304
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 149/291 (51%), Gaps = 11/291 (3%)
Query: 30 QRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGK 88
Q D LK L+A P+T +LL T++G ++ L+K ++ +Q A L+ WK+ I
Sbjct: 59 QSAMDILKILRATPMTVELLQKTRIGMTVNELRKKTTDRSLQVEAKNLIRHWKKLIECKS 118
Query: 89 ETNGNKRNGSKLSVDEKFQKQTSDSNAVKS-----GCSTAKEKKATASIR-KPSHADQAK 142
++ + + S S + +++V S G S + A+ IR +P +
Sbjct: 119 ASSKSSGSSSSSSAAAANSVNLTRNDSVASNMSEGGRSNDSDGVASTPIRPRPFQKNTTF 178
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
+R+ + L + + EI+ + R +AA +E+ ++ G
Sbjct: 179 PPQMTDVREKCRQMLLKSLEPDLNSPEISVLTRER----LAAEIEQEIYSLFNNTGDRYC 234
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
RS +FN+ D+KNPDL+R VL GE+T RLATMT EE+AS+ + + + + +
Sbjct: 235 ACVRSRVFNLRDKKNPDLKRSVLSGEITAIRLATMTSEEMASEALKAARRKFTKEAIEEH 294
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+V ++ TD FKC C K NC+Y Q QTRSADEPMTT+V C EC RWK
Sbjct: 295 QVAQEVGTPTDMFKCGKCHKKNCTYTQAQTRSADEPMTTFVYCRECGNRWK 345
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 140/279 (50%), Gaps = 26/279 (9%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKR---NGS-- 98
+T +L ++ G ++ L+ H ++V A E++ WK ++ K+ G K NG
Sbjct: 36 ITEAILRESKAGLAVGKLRSHATKEVSELAKEVVRQWKTEVDKEKKAAGAKSPVLNGKPA 95
Query: 99 ----KLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLE 154
K SV S ++ +G +T K T I + D +D RDK + L
Sbjct: 96 APSRKNSVATPTTPTVSTPGSISNGSTTRTTK--TDGI----NTDVTRDKTRDKCIELLY 149
Query: 155 KALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSD 214
AL+ A E I R KA E +F K K RS++ N+ D
Sbjct: 150 DALA--FDSGAPSELIFQRAKA---------AEDAVFHTFNGTTGDYKTKIRSLVVNLKD 198
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+KNP LR V+ G++ +LA MT +++AS+ER+ +++IK + MFK E+++ TD
Sbjct: 199 KKNPGLRESVVSGDLPAAKLAKMTSQDMASEERKNADKKIKEENMFKALGAEEQQAETDA 258
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F+C C + C Y Q QTRSADEPMTT+VTC CN RWK
Sbjct: 259 FQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWK 297
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 145/289 (50%), Gaps = 36/289 (12%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ +T +LL ST+VG S+ L+K + ++ + L+ WK K++ G E G
Sbjct: 29 DLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEIITISKSLIKSWK-KLLDGSEQPG 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH---ADQAKDSMRDKI 149
K + QT + + + G S E T K + DS+R K
Sbjct: 88 ------------KEKPQTIPTCSKELGSSKKIEVPKTPITPKMTRFPPLPVTSDSVRTKC 135
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ L AL A D + +AA +E V+F +++ + K + RS +
Sbjct: 136 REMLRAALQTDGDHVAI---------GADCEFLAAQIEEVVFGEMQNTDMKYKNRIRSRI 186
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE--- 266
N+ D KNPDLR+ VL G + PE++A M+ EE+AS+E ++ K M K + E
Sbjct: 187 SNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMASNELKEMR-----KAMTKAAIQEHQM 241
Query: 267 -KKKGT-TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K GT TD F C C K NC+Y Q+Q RSADEPMTT+V C EC RWK
Sbjct: 242 AKTGGTQTDLFTCGKCKKKNCTYTQVQIRSADEPMTTFVACNECGNRWK 290
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 36/289 (12%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ +T +LL ST+VG S+ L+K + ++ + L+ WK K++ G E G
Sbjct: 29 DLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEIITISKSLIKSWK-KLLDGSEQPG 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKE---KKATASIRKPSHADQAKDSMRDKI 149
K + QT + + + G S E T + + DS+R K
Sbjct: 88 ------------KEKPQTIPTCSKELGSSKNIEVPKAPITPKMTRFPPLPVTSDSVRTKC 135
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ L AL A D + +AA +E V+F +++ + K + RS +
Sbjct: 136 REMLRAALQTDGDHVAI---------GADCEFLAAQIEEVVFGEMQNTDMKYKNRIRSRI 186
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE--- 266
N+ D KNPDLR+ VL G + PE++A M+ EE+AS+E ++ K M K + E
Sbjct: 187 SNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMASNELKEMR-----KAMTKAAIQEHQM 241
Query: 267 -KKKGT-TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K GT TD F C C K NC+Y Q+Q RSADEPMTT+V C EC RWK
Sbjct: 242 AKTGGTQTDLFTCGKCKKKNCTYTQVQIRSADEPMTTFVACNECGNRWK 290
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV---MFEKLRPMGV 199
D+ RD+ R+ AL+ ++ ++++ D K++A+ V+++ M K G
Sbjct: 6 DAARDRTREIFADALALCVTDG--------KIESVDAKKLASIVDQIENSMTAKWPSGGK 57
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
K K R + FN+ D KNPDLR + GE++ L ++PEEL S+ERR NE I+
Sbjct: 58 DYKAKVRQLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPEELGSNERRNANERIRELAE 117
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ ++++ +TD FKC C + C+Y+Q+QTRSADEPMTT+VTC EC RWK
Sbjct: 118 WEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVECGNRWK 171
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 92/138 (66%), Gaps = 4/138 (2%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKH--RSIMFNMSDEKNPDLRRRVLIGEVTPERLA 235
DP+++A ER +FE R G +EK + RS +FN+ D+KN LR VLIG VTPE+ A
Sbjct: 104 DPEELAVRTERKLFEVHR--GTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFA 161
Query: 236 TMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSA 295
MT +E+ASDE + + E+ + + + ++ ++ +D FKC CGK NC+Y Q+QTRSA
Sbjct: 162 VMTADEMASDEMKAQREKFTKQAIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSA 221
Query: 296 DEPMTTYVTCAECNKRWK 313
DEPMTT+V C EC RWK
Sbjct: 222 DEPMTTFVFCRECGNRWK 239
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 152/283 (53%), Gaps = 31/283 (10%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNKR------- 95
+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+ +
Sbjct: 1 MTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDKDSEEKKKEPA 59
Query: 96 NGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI-RKPSHADQAKDSMRDKIRKDLE 154
+ S+ S D + + +S +++ + +A S R PS +D S+R K R+ L
Sbjct: 60 SSSQNSPDAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSD----SVRVKCREMLS 115
Query: 155 KALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
AL R + AD+EE+ + +E +F++L+ + K + RS +
Sbjct: 116 AAL-RTGDDYIAIGADEEEL------------GSLIEEAIFQELKNTDMKYKNRVRSRIA 162
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D KNP+LR+ VL G + P++ A MT EE+ASDE ++ + + + + + ++ +
Sbjct: 163 NLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGT 222
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 223 QTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 265
>gi|19114535|ref|NP_593623.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe
972h-]
gi|1351227|sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName:
Full=TFIIS
gi|924620|gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
gi|12038919|emb|CAC19733.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
Length = 293
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 24/273 (8%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLS--- 101
T +LL T++G + L+ HP EKV A E++ WK + G+ S S
Sbjct: 39 TEELLKETRLGLVVGKLRSHPNEKVGEQAREIVKKWKADVSKGRPLKTTTTTSSTPSKHA 98
Query: 102 -VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRV 160
V + QKQ ++ SG T K ++ + M + + D +++ S +
Sbjct: 99 DVGSQAQKQVQKQSS--SGQRTFKSDNVNVNVTDDKIRNNCIGLMYNALVIDSDESSSLI 156
Query: 161 ASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDL 220
++A +EI +V AR + G + + RS+ N+ D+ NP L
Sbjct: 157 IAKA---KEIDAQVLARAAGKT---------------GSEYRNRMRSLYMNLKDKNNPKL 198
Query: 221 RRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGC 280
R VL E+TP+RL+TMT ELAS++RR+E+ +++ + +F + + +K TD F C C
Sbjct: 199 RASVLRNEITPQRLSTMTSAELASEDRRKEDAKLEQENLFHAQGAKPQKAVTDLFTCGKC 258
Query: 281 GKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ SY+QMQTRSADEPMTT+ C C RWK
Sbjct: 259 KQKKVSYYQMQTRSADEPMTTFCECTVCGNRWK 291
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 156/292 (53%), Gaps = 32/292 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 85 DPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ +++ E ++ +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEELGSQIE-----------EDILCVN---TDMKY 185
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G ++P+ A MT EE+ASDE ++ + + + + +
Sbjct: 186 KNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEAIRE 245
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 246 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 297
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 149/284 (52%), Gaps = 14/284 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKET-- 90
D L+ L+ ++ + L ST+VG S+ ++K E+VQ A L+ WK K++ G E
Sbjct: 28 DLLRELKNIKMSLETLQSTRVGMSVNAVRKQSSNEEVQTLAKTLIKSWK-KLLDGSEEKK 86
Query: 91 -NGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
+ + S S D ++ S S+ T+ + + A D +R K
Sbjct: 87 KDSSPVRSSSTSKDYGSSEKGSKSSEGPPSTPTSPTTTTLSQVTSFPPAPVTTDCVRSKC 146
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ L AL DD+ RV D + +AA +E +F++ + + K + RS +
Sbjct: 147 RELLVVALQ------TDDDHKAIRV---DCEHLAAQIEEQIFQEFKSTDMKYKTRLRSRI 197
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ D+KNP+LRR VL G ++P R+A MT EE+AS E +Q E + + + + ++ +
Sbjct: 198 SNLKDQKNPELRRNVLCGNISPHRIACMTAEEMASAELKQMREALTKESIREHQLSKVGG 257
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F CS C +C+Y Q+QTRSADEPMTT+V C +C RWK
Sbjct: 258 TETDMFICSKCHGKSCTYTQVQTRSADEPMTTFVLCNDCGNRWK 301
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 31 RCADALKHLQAFPV-TYDLLVS--TQVGKSLRHL-KKHPCEKVQNAASELLHIWKQKIVL 86
R D L L++ P+ +D + GKS+ L KK E V+ A E W KI++
Sbjct: 24 RAVDILTQLESTPIEAFDFTSAKFAACGKSISALRKKAKSELVKRKAKECKDAW-TKIIV 82
Query: 87 GKETNGN---------KRNGSKLSVDEKFQKQTSDSN--------------AVKSGCSTA 123
K +NG + + SD N ++ +
Sbjct: 83 SKSSNGTDSKTPPQKKTTKTTTETTTTTTTAPKSDENIEEKKKEKGEEKVEEGRNTTTEN 142
Query: 124 KEKKATASIRK--PSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQ 181
EK A +++ S +Q ++ RD+ R + L+ E + E+I+ AR
Sbjct: 143 DEKSALEQVQRTIASKIEQTNNATRDRSRDVIAYGLALAHCEG-NCEDISVTSLAR---- 197
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+ VE M EK + +G K K R + FNM D KNPDLRR + E+ L ++ EE
Sbjct: 198 IVEEVEDAMSEKWKDLGKEYKAKLRQLAFNMKDPKNPDLRRAIAKREIDATTLIDLSSEE 257
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
L SDERR N+ I+ + ++K+ +T FKC CG+ C+++Q+QTRSADEPMTT
Sbjct: 258 LGSDERRAANQSIREHAEAEAVRGQRKEASTTAFKCGKCGQRACTFYQLQTRSADEPMTT 317
Query: 302 YVTCAECNKRWK 313
+VTC C RWK
Sbjct: 318 FVTCVNCENRWK 329
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 92/138 (66%), Gaps = 4/138 (2%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKH--RSIMFNMSDEKNPDLRRRVLIGEVTPERLA 235
DP+++A ER +FE R G +EK + RS +FN+ D+KN LR VLIG VTPE+ A
Sbjct: 17 DPEELAIRTERKLFEVHR--GTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFA 74
Query: 236 TMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSA 295
MT +E+ASDE + + E+ + + + ++ ++ +D FKC CGK NC+Y Q+QTRSA
Sbjct: 75 VMTADEMASDEMKAQREKFTKQAIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSA 134
Query: 296 DEPMTTYVTCAECNKRWK 313
DEPMTT+V C EC RWK
Sbjct: 135 DEPMTTFVFCRECGNRWK 152
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 148/278 (53%), Gaps = 22/278 (7%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNKRN------ 96
+T +LL ST++G S+ L+K E+V + A L+ WK K++ G T+ +
Sbjct: 1 MTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDKDPEEKKKEPA 59
Query: 97 -GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEK 155
S+ S + + + +S + + + + A++ ++ R PS +D + R+ + L
Sbjct: 60 ISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRT 119
Query: 156 ALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDE 215
VA AD+EE+ + +E +++++R + K + RS + N+ D
Sbjct: 120 GDDYVAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 166
Query: 216 KNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQF 275
KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F
Sbjct: 167 KNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLF 226
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 227 TCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 264
>gi|189203175|ref|XP_001937923.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985022|gb|EDU50510.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 306
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 143/277 (51%), Gaps = 22/277 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS-KLSVD 103
T DLL ST++G ++ L++H VQ A+EL+ W+ ++ K+ K++G+ K++ +
Sbjct: 42 TEDLLRSTRIGVTINRLRQHKDPAVQKLATELVSKWRDEV---KKKQQPKKDGAVKVAAN 98
Query: 104 EKFQKQTSDSNAVKS--GCSTAKEKKATASIRKPSHADQAKDSM-----RDKIRKDLEKA 156
+ + + S AK+K + ++ D K + RD + +
Sbjct: 99 GGAASSPAPPASGTASPAPSQAKKKHDVPADKRNHKTDNVKYQVTGSEARDACVRLMYDG 158
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ + SEA DE + VA VE + + K K RS+ N+ +
Sbjct: 159 LAYM-SEAMPDEILL----------VAKQVEAAAYTNAGSVNDGYKAKMRSLFQNLKSKS 207
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
NP LR+RVL GEV +R TMT +E+ SDERR +E++KA+ M + V + +K + +F+
Sbjct: 208 NPALRKRVLTGEVPAKRFVTMTHDEMKSDERRALDEKLKAENMNEAMVAQVEKAISKEFQ 267
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CS C K SY Q QTRSADEPMTT+ C C RWK
Sbjct: 268 CSKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNRWK 304
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS----- 98
+T L +++G ++ L+ H + N A E++ WK ++ KET G+ S
Sbjct: 36 ITEAWLRESKIGLAVGKLRSHANRDISNLAKEVVKKWKAEVEKEKETRGSSATPSTPGGA 95
Query: 99 -------KLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHA------------D 139
K K +S S +T A P++ D
Sbjct: 96 STTASTPKPPPVRKASIASSVGAPPASPATTIASPTTYARTSLPTNGAPRTAKLDGISMD 155
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
D RDK + + AL A+D D V R A +E + + R G
Sbjct: 156 VTSDKTRDKCIELIYDAL------ASDSSAPADLVLKR-----ARGIESDVLSQFRTTGA 204
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
K K RS N+ D+ NP LR V+ GE+ E+ A MT ++AS+ERR ++++I+ + +
Sbjct: 205 EYKAKIRSFFVNLKDKNNPGLRAAVVSGELPVEKFAKMTSADMASEERRAQDQKIREENL 264
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F+ E+++ TD F+CS C + C Y Q QTRSADEPMTT+VTC CN RWK
Sbjct: 265 FQSLGAEEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWK 318
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ +T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 43 DLLKELKNILMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 101
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D +
Sbjct: 102 DPEEKKKEPTISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKC 161
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R+ + L VA AD+EE+ + +E +++++R + K +
Sbjct: 162 REMLAAALRTGDDYVAI-GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRV 208
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++
Sbjct: 209 RSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMA 268
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 269 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 316
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 133/276 (48%), Gaps = 22/276 (7%)
Query: 42 FPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKR----NG 97
F V +L ++ G ++ L+ + V + A EL+ WK ++ K + GN NG
Sbjct: 35 FQVNETILRESKAGLAVGKLRSSSTKAVSDLAKELVKKWKAEVEKAKGS-GNASPKPTNG 93
Query: 98 SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKAL 157
S + + V KK I+ D+ RDK + + L
Sbjct: 94 SAPARKASVPGTPTTPTIVNGKVELRTAKKDGVKIKSTG------DNTRDKCSELMYDGL 147
Query: 158 SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKN 217
A+D +D++ ++ AA+VE +F + K K RS+ N+ D+ N
Sbjct: 148 ------ASDSGAPSDQIASK-----AAAVETAVFNQFGSTSAEYKSKIRSLFVNLKDKNN 196
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKC 277
P LR ++ G+++P + ATM+ E+AS+ERR ++ ++ + FK +++ TD F+C
Sbjct: 197 PSLRETIVSGDLSPSKFATMSSSEMASEERRAADKRLQEENFFKSLAAAEQEAETDGFQC 256
Query: 278 SGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C + C Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 257 GRCKQRKCRYRQAQTRSADEPMTTFVTCTNCGNRWK 292
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 76/112 (67%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K K R + FN+ D KNPDLRR V G ++P+ L + PEEL SDERR EN I+ +
Sbjct: 2 KAKVRQLSFNLKDPKNPDLRRSVADGLISPKVLLDLKPEELGSDERRNENAAIREAATAE 61
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K++ +TD FKC CG+ C+Y+Q+QTRSADEPMTT+VTC C+ RWK
Sbjct: 62 AVRGQKQQASTDAFKCGKCGQRKCTYYQLQTRSADEPMTTFVTCVNCDNRWK 113
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 152/295 (51%), Gaps = 30/295 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKET-- 90
+ LK LQ PV +LL T++G ++ L+K E+V + A L+ WK K + GK T
Sbjct: 30 ELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDEEVISLAKTLIKNWK-KFLSGKLTLY 88
Query: 91 ---------NGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI-RKPSH--A 138
+K +K D+K K + D N VK KE+K I RK S A
Sbjct: 89 STSSSSSKKKDDKSEKNKDDGDQKKDKDSIDGNDVK-----MKEEKPHKDIQRKQSTFPA 143
Query: 139 DQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMG 198
D++R K R+ L AL RV + P+++A +E ++ + +
Sbjct: 144 PTTTDAVRLKCRELLAAAL-RVDGNTIEG--------CASPEELAEELEEAIYAEFKNTD 194
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
K + RS + N+ D KNP+LR + G +TP RLA MT EE+ASDE +Q E+ K +
Sbjct: 195 NRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEIKQLREQFKKEA 254
Query: 259 MFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 255 INDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 309
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 33/291 (11%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHL-KKHPCEKVQNAASELLHIWKQKIVLGKETNG 92
D LK L + D+L T++G ++ +L KK E+V A L+ WK+ +
Sbjct: 29 DLLKVLGRLKINLDILTVTRIGMTVNNLRKKSKDEEVVTVAKSLIKTWKKFV-------- 80
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQA----------K 142
+ + K+ CS+ KE A A +
Sbjct: 81 --------PENSEKSKKKEPEEESVKKCSSGKEDNAKGGSSGNGPAPKGFVPKSTNIGTT 132
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D +R + R+ + AL D + + P++ +E +F + K
Sbjct: 133 DDVRLRCREMISNALKGTTDAGLPDGTV------KPPEEFGDLIEEAIFSNFKSTSAKYK 186
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS +FN+ D+KNP LR VL G + P + A MT +E+ASDE + + + +
Sbjct: 187 NQIRSRVFNLRDKKNPALRENVLTGIIDPPKFAVMTADEMASDEIKNQRAAFVKQGIDAS 246
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD KC C +SNC+Y+Q+QTRSADEPM T+V C EC RWK
Sbjct: 247 QLAHIQGTKTDLLKCGKCKQSNCTYNQIQTRSADEPMATFVLCNECGNRWK 297
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 143/284 (50%), Gaps = 25/284 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLG---KE 89
D LK LQ + ++L T++G ++ L+K ++V + + L+ WK K + G KE
Sbjct: 30 DLLKQLQTLNINLEVLTKTRIGMTVNALRKSSKDDEVISLSKTLIKNWK-KFLSGSNAKE 88
Query: 90 TNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
T+ + K +EK ++ D + KEKK P + D++R K
Sbjct: 89 TSSTSTSKPKRDKEEKSSREDKDRD---------KEKKLPNQF--PPSSSNTTDAVRLKC 137
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ L A+ D EE P+ +A +E +F++ + + K + RS +
Sbjct: 138 REMLAAAIR------CDTEEFEG---CASPEDLAEELEEAIFQEFKNTDMRYKNRVRSRI 188
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ D KNP+LR IG + RLA MT EE+A+DE +Q E + + ++ +
Sbjct: 189 ANLKDVKNPNLRTNFRIGAIPASRLAVMTAEEMANDEIKQLRERFTKEAINDAQLATVQG 248
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 249 TKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 292
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 150/296 (50%), Gaps = 32/296 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
+ LK LQ PV +LL T++G ++ L+K E+V + + L+ WK K + G
Sbjct: 7 ELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDEEVISLSKTLIKNWK-KFLSGSNKEK 65
Query: 93 NKRNG------------SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI-RKPSH-- 137
+ + +K D K +K D + KE+K I RK S
Sbjct: 66 DSTSSSSSKKKDEKSDKAKEESDHKKEKDIMDVDV------KVKEEKPFKDIQRKQSSFP 119
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
A D++R K R+ L AL D ++ D + P+++A +E ++ + +
Sbjct: 120 APITTDAVRLKCRELLAAALHV-------DGKVIDGCAS--PEELAEELEEAIYAEFKNT 170
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
K + RS + N+ D KNP+LR L+G +TP RLA MT EE+ASDE +Q E+ K +
Sbjct: 171 DSRYKNRVRSRVANLRDVKNPNLRTNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKE 230
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 231 AINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 286
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 147/281 (52%), Gaps = 19/281 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKH-PCEKVQNAASELLHIWKQKIVLGKETNG 92
+ LK L + +T LL +T++G ++ ++K P ++V A L+ WK+ +LG+
Sbjct: 17 ELLKELSSCTMTIQLLQTTRIGVAVNAVRKRCPDQQVVALAKVLIKNWKR--LLGERLP- 73
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+ NG K V+ S + + + P + DS+RDK
Sbjct: 74 -RDNGGKAKVEIPQSPSPPTSPTSPM---PSPSLGSAGCLLAPCYL--TGDSVRDKC--- 124
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
+ L+ V D +E + +Q+A+ +E ++++L+ + + + RS + N+
Sbjct: 125 -VEMLAAVLKVDGDYKEF-----GVNCEQLASEIEDHIYQELKSTDMKYRNRVRSRISNL 178
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D +NP LRR VL G + R+A MT EE+ASDE ++ + + + + ++ + TT
Sbjct: 179 RDPRNPALRRSVLCGGIAASRIARMTAEEMASDELKELRNAMTLEAIREHQMAKTGGTTT 238
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 239 DLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 279
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 142/293 (48%), Gaps = 29/293 (9%)
Query: 36 LKHLQAFP-VTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
L L+ P +T LL ++ G ++ L++H ++V + A E++ WK ++ K+ +G
Sbjct: 26 LNTLKQQPKITESLLRESKAGLAVGKLRQHASKRVADLAKEIVRKWKTEVEREKQASGG- 84
Query: 95 RNGSKLSVDEKF----QKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK-------- 142
G+K + + K + ++ SNA + S K + AK
Sbjct: 85 --GAKAASNGKTSAAKKSVSAGSNAATPSTPVTPTASTSGSGSKLNETRSAKTDGVKIEY 142
Query: 143 --DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
D RDK + + AL V A E++ R K +E+ +F A
Sbjct: 143 TGDKTRDKCAELIYDAL--VFDSGAPSEQVMTRAK---------DIEKTVFNDNSGANAA 191
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
K K RS+ N+ D+ NP LR V+ G++ + M+ +++AS+ER+ + +I + +F
Sbjct: 192 YKAKIRSLFVNLKDKNNPGLRESVVSGDLAIAKFCRMSSQDMASEERKAADAKIAQENLF 251
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K E+ + TD F+C C + C Y Q QTRSADEPMTT+VTC CN RWK
Sbjct: 252 KTLGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWK 304
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 145/295 (49%), Gaps = 27/295 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
D LK LQ + ++L T++G ++ L+K E+V A L+ WK+ + T
Sbjct: 31 DLLKTLQTLSINLEILTKTRIGMTVNELRKSSKDEEVIALAKTLIKNWKRFLASPAPTTP 90
Query: 93 NKRNGSK------------LSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQ 140
N + SK S K S++ S +E+K +S + +
Sbjct: 91 NNSSASKEGASNSSSASKTSSTASKSSSSKDKSSSSGSSSKDKREEKRASSSQTSFPSGG 150
Query: 141 AKDSMRDKIRKDLEKAL--SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMG 198
D++R K R+ L AL V A+ P+++AA +E ++ + +
Sbjct: 151 MTDAVRLKCREMLTTALKMGEVPEGCAE------------PEEMAAELEDAIYAEFKNTD 198
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
+ K + RS + N+ D KNP LR + G V+ ++LA MTPEE+ASDE ++ E+ +
Sbjct: 199 MKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEA 258
Query: 259 MFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 259 INDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 313
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 37/311 (11%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGK--ETN 91
+AL L ++ +LL T++G S+ L+ HP ++++ ++L+H WK I G + N
Sbjct: 113 EALTVLDRVDMSRELLAKTRIGVSVGKLRTHPDSQIRSRCTQLVHKWKAGISGGGLAKEN 172
Query: 92 GNKRNG--------------SKLSVDEKFQKQTSDSNA-VKSGCST-----AKEKKATAS 131
R G + +EK +S+S+ G A EK +TA
Sbjct: 173 ATSRPGPNGRGQGKPPTGTLGNDTANEKAHGLSSNSSPRADEGLHGVPVDRAPEKASTAV 232
Query: 132 IRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMF 191
P A + D++RD+ R L +AL V + + DR + + +VAA +E+ ++
Sbjct: 233 EDYPGPA--SGDAVRDRARGFLWRAL--VDGMQSRRDLGADR--SGETARVAAEIEKALW 286
Query: 192 EKL---RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERR 248
++ R + +++ +N +D+KNPDL +VL G TPE+LA M+ +LASDE++
Sbjct: 287 QEYCVRRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLAIMSSADLASDEKK 346
Query: 249 QENEEIKAKFMFKC----EVPEKKKGTTD--QFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
+ E K + M C E+ + +G ++ QF C C + Y QMQTRS+DEPMTT+
Sbjct: 347 RMRELQKKESMEACQSDWEMKKLMEGASEGGQFPCFKCRTTKTVYFQMQTRSSDEPMTTF 406
Query: 303 VTCAECNKRWK 313
VTC EC RWK
Sbjct: 407 VTCLECGNRWK 417
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 14/283 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK---VQNAASELLHIWKQKIVLGKET 90
D L+ LQ + D+L T++G ++ L+K C K V + A L+ WK+ + +
Sbjct: 30 DLLRELQRLNIDLDILTKTRIGMTVNELRK--CSKDDEVISLAKTLIKSWKRFLAATPPS 87
Query: 91 NGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIR 150
+ + SK S + + + K KE K A P+H+ D++R K R
Sbjct: 88 KESSKESSKSSSKSSSKSSSKSESNNKKESEKEKEAKKPAQTSFPTHSSNTTDAVRLKCR 147
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
+ L AL RV E + + P+++A +E ++ + + + K + RS +
Sbjct: 148 EMLTNAL-RVDGEQPEG--------CQSPEELADELEEAIYVEFKNTDMKYKNRVRSRVA 198
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D KNP LR + G +T +RLA MTPEE+ASDE + + + + ++ +
Sbjct: 199 NLKDPKNPSLRSNFVSGAITAQRLAKMTPEEMASDEMKNLRDRFVKEAINDAQLATNQGT 258
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD KC C K NC+Y+Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 259 KTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTFVLCNECGHRWK 301
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 37/301 (12%)
Query: 21 ATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHL-KKHPCEKVQNAASELLHI 79
A NR + + D L +L+ +T ++L T+VG + ++ KK E V N A L+
Sbjct: 17 ALNREIVDNEFILDLLTNLKDLKMTLEILQKTRVGYHVNNVRKKADKEVVINLAKSLIKD 76
Query: 80 WKQKIVLGKETNG-NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHA 138
WK+ + K+ +K + ++ D + Q S+ N S E+K ++ + +
Sbjct: 77 WKRLLPDSKKNEAKDKTDSRQMDKDSQDLIQQSEINP-----SLMVEEKDNTTVHQSHNN 131
Query: 139 DQ------AKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFE 192
D+ + + RD RK L ALSR + + +F+
Sbjct: 132 DKDMQVLSSGNPTRDLSRKLLIGALSR------------------------DGLNKAIFK 167
Query: 193 KLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENE 252
+L+ + K + RS + N+ D KNP+L ++VL G +TPE++A MT EE+ASDE ++ +
Sbjct: 168 ELKGPNMKYKNRVRSRISNLKDSKNPNLCQKVLSGIITPEQIAKMTAEEMASDEMKKLRQ 227
Query: 253 EIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+ + ++ + TD C C K NCSY+QMQTRSADEPMTT+V C EC RW
Sbjct: 228 GYAKEGIRDAQMAVTQGTKTDLLTCGKCHKKNCSYNQMQTRSADEPMTTFVFCHECGHRW 287
Query: 313 K 313
K
Sbjct: 288 K 288
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 148/276 (53%), Gaps = 30/276 (10%)
Query: 50 VSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----KETNGNKRNGSKLSVD- 103
+ST++G S+ ++K E+V + A L+ WK K++ G K+ + K+ + S +
Sbjct: 1 MSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEKDLDEKKKEPAITSQNS 59
Query: 104 -EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVA 161
E ++ TS N T A++ ++ R PS +D S+R K R+ L AL R
Sbjct: 60 PEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SVRLKCREMLAAAL-RTG 114
Query: 162 SE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKN 217
+ AD+EE+ + +E +++++R + K + RS + N+ D KN
Sbjct: 115 DDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKN 162
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKC 277
P+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C
Sbjct: 163 PNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTC 222
Query: 278 SGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 223 GKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 258
>gi|358058917|dbj|GAA95315.1| hypothetical protein E5Q_01972 [Mixia osmundae IAM 14324]
Length = 330
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 47/313 (15%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGN 93
D L L+++ + D L T++G SL LKK P E ++ + +++ WK + K G+
Sbjct: 30 DILSRLRSWSPSADSLRQTKLGISLTGLKKSPHESIKQESMQIVRTWKDAV---KPKGGS 86
Query: 94 KRNGSKLSVDEKFQKQTSDSNAVKSG--CSTAKEKKATA----------SIRKPSHAD-- 139
+ + + + A K+G +T KE+ A A ++RK S
Sbjct: 87 AAKTATPAAASTPGESAASPEAAKTGTPAATVKEEAAPAKSARTSVPVSTVRKKSETPMK 146
Query: 140 ----------------QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVA 183
+ + RD + K AL+ + AA + I RV
Sbjct: 147 VLTGPRSLKTDGIELPELDERQRDNVVKLFYDALA--SDSAAPADMIATRV--------- 195
Query: 184 ASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
VE +++ + R K RS++ N D+KNP LR V+ GE++ +LA+M +
Sbjct: 196 MDVEEAVYKFYEGDTSGDYRQKTRSLLLNFKDKKNPALREAVVSGELSASKLASMKASDF 255
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGT--TDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
+S+ER+ E+ ++ + MF + G TD FKC CGK C+Y+QMQTRSADEPMT
Sbjct: 256 SSEERKAEDRKLAEQNMFAAQSAAPAAGQAKTDAFKCGKCGKRECTYYQMQTRSADEPMT 315
Query: 301 TYVTCAECNKRWK 313
T+V C CN RWK
Sbjct: 316 TFVCCIVCNNRWK 328
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 130/288 (45%), Gaps = 48/288 (16%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T DLL ST++G + LK H V ASEL+ W+ + K+ G+ +
Sbjct: 42 TEDLLRSTKIGIIVNKLKTHKDPNVAKKASELVSKWRSDV---------KKAGADRASTP 92
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHA---------------DQAKDSMRDKI 149
K Q N +S S A A+ KP H + RD
Sbjct: 93 KQQ------NGTQSPASQAAPSPVPAAKPKPKHNVPLDKRSVDTDGVDWRHTGNQTRDNC 146
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAA---SVERVMFEKLRPMGVAE-KRKH 205
K + AL+ + ++ PK V A VE + K +P A K +
Sbjct: 147 LKMMYNALALMVEDS--------------PKSVMAVAREVELAAYNKYQPETSAPYKERM 192
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS+ N+ ++ NP LR+RVL GE+ PE+ TM+ EEL S ERR E E ++ + M K V
Sbjct: 193 RSLFQNLKNKSNPGLRKRVLAGEIRPEKFVTMSSEELMSAERRAEAERLEKENMNKAMVA 252
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + C CG+ SY Q QTRSADEPMTT+ C C RWK
Sbjct: 253 QAERSISTSLTCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK 300
>gi|451849746|gb|EMD63049.1| hypothetical protein COCSADRAFT_182336 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 136/277 (49%), Gaps = 22/277 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSK---LS 101
T DLL ST++G ++ L+ H VQ A+EL+ W+ ++ K+ K++G S
Sbjct: 42 TEDLLRSTRIGVTINRLRTHKDPAVQKLATELVAKWRDEV---KKKQPPKKDGPAKVATS 98
Query: 102 VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK-----DSMRDKIRKDLEKA 156
S S +K+K S ++ D+ K + RD + +
Sbjct: 99 NGSASSPAPPPSGTASPAPSQSKKKHDVPSDKRNHKTDKVKYQVTGNEARDNCVRLMYDG 158
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ SEA DE + +A VE + + A K K RS+ N+ ++
Sbjct: 159 LA-FMSEAMPDEILN----------IAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKS 207
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
NP LR+RVL GE+T +R MT +E+ SD RR E+E+++ + M + V + +K + +F+
Sbjct: 208 NPQLRKRVLTGEITAKRFVVMTHDEMKSDARRAEDEKLEKENMNQAMVAQVEKAISKEFQ 267
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C + SY Q QTRSADEPMTT+ C C RWK
Sbjct: 268 CGKCKQKKVSYSQAQTRSADEPMTTFCECMNCGNRWK 304
>gi|320164226|gb|EFW41125.1| transcription elongation factor A [Capsaspora owczarzaki ATCC
30864]
Length = 433
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 25/288 (8%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNGNK 94
L L P++ LL T +GK + + K VQ A ++ +WK G
Sbjct: 32 LSELAKQPISVTLLSDTGIGKIVNNFGKRATNAAVQAEAKRVVALWKTAC----NAEGAA 87
Query: 95 RNGSKLSVDEKFQKQTSD------SNAVKSGCSTAKE-KKATASIRKPSHADQAKDSMRD 147
+ V F QT + S A SG + A+ ++++ + S D+ RD
Sbjct: 88 APATPTPVPAGFASQTQNAPTPTVSRAESSGSAPAEPARRSSVNSNAISTLVHTGDAHRD 147
Query: 148 KIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH-- 205
K L KAL + D+ +I++ + +A S+E ++ KL V+ K K
Sbjct: 148 SCIKALAKALDPTVT---DETQISEYFVS-----LAQSIEASIY-KLHNSEVSPKYKTAV 198
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS MFN+ ++N D R+ VL G + PE++A MT EE+A+ E E +++ + M ++P
Sbjct: 199 RSKMFNL--KQNEDFRKAVLNGSIPPEKVAVMTSEEMATKELNAERKKLTTEAMNDAQMP 256
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K TDQ +C CGK + SY Q+QTRS+DEPMTT+VTC C WK
Sbjct: 257 APKMSKTDQLRCGKCGKRDASYFQLQTRSSDEPMTTFVTCNVCGHNWK 304
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 147/275 (53%), Gaps = 30/275 (10%)
Query: 51 STQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----KETNGNKRNGSKLSVD-- 103
ST++G S+ ++K E+V + A L+ WK K++ G K+ + K+ + S +
Sbjct: 22 STRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEKDLDEKKKEPAITSQNSP 80
Query: 104 EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVAS 162
E ++ TS N T A++ ++ R PS +D S+R K R+ L AL R
Sbjct: 81 EAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SVRLKCREMLAAAL-RTGD 135
Query: 163 E----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNP 218
+ AD+EE+ + +E +++++R + K + RS + N+ D KNP
Sbjct: 136 DYIAIGADEEEL------------GSQIEEAIYQEMRNTDMKYKNRVRSRISNLKDAKNP 183
Query: 219 DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C
Sbjct: 184 NLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCG 243
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 244 KCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 278
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 147/275 (53%), Gaps = 30/275 (10%)
Query: 51 STQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----KETNGNKRNGSKLSVD-- 103
ST++G S+ ++K E+V + A L+ WK K++ G K+ + K+ + S +
Sbjct: 22 STRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEKDLDEKKKEPAITSQNSP 80
Query: 104 EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVAS 162
E ++ TS N T A++ ++ R PS +D S+R K R+ L AL R
Sbjct: 81 EAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SVRLKCREMLAAAL-RTGD 135
Query: 163 E----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNP 218
+ AD+EE+ + +E +++++R + K + RS + N+ D KNP
Sbjct: 136 DYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNP 183
Query: 219 DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C
Sbjct: 184 NLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCG 243
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 244 KCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 278
>gi|452001563|gb|EMD94022.1| hypothetical protein COCHEDRAFT_1201848 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 141/277 (50%), Gaps = 22/277 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNG-SKLSVD 103
T DLL ST++G ++ L+ H VQ A+EL+ W+ ++ K+ K++G +K++
Sbjct: 42 TEDLLRSTRIGVTINRLRTHKDPAVQKLATELVAKWRDEV---KKKQPPKKDGPAKVATS 98
Query: 104 EKFQKQTSDSNAVKS--GCSTAKEKKATASIRKPSHADQAK-----DSMRDKIRKDLEKA 156
+ + + S +K+K S ++ D+ K + RD + +
Sbjct: 99 NGSTSSPAPPPSGTASPAPSQSKKKHDVPSDKRNHKTDKVKYQVTGNEARDNCVRLMYDG 158
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ SEA DE + +A VE + + A K K RS+ N+ ++
Sbjct: 159 LA-FMSEAMPDEILN----------IAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKS 207
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
NP LR+RVL GE+T +R MT +E+ SD RR E+E+++ + M + V + +K + +F+
Sbjct: 208 NPQLRKRVLTGEITAKRFVVMTHDEMKSDARRAEDEKLEKENMNQAMVAQVEKAISKEFQ 267
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C + SY Q QTRSADEPMTT+ C C RWK
Sbjct: 268 CGKCKQKKVSYSQAQTRSADEPMTTFCECMNCGNRWK 304
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+R+K R+ L VA+ DD+ T V D +AA +E +F++ + + K
Sbjct: 146 DSVRNKCRELL------VAALQTDDDYKTIGV---DCDHLAAQIEHQIFQEFKSTDMKYK 196
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D+KNPDLRR VL G ++ +R+A MT EE+AS E +Q E + + + +
Sbjct: 197 ARLRSRISNLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAELKQIREALTKESIREH 256
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F CS C NC+Y Q+QTRSADEPMTT+V C C RWK
Sbjct: 257 QLSKVGGTETDMFICSKCHGKNCTYTQVQTRSADEPMTTFVLCNGCGNRWK 307
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 12/269 (4%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T LL T++G ++ L+ ++ + +++ WK + KR+ SK +
Sbjct: 37 TEKLLRETKLGIAVNKLRTSSDSRISDLVKKMIKSWKDTVT------AQKRDASKKVEGK 90
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
K K+ +S VKS S+A AT+ AKD + +I D K +R
Sbjct: 91 KETKE--ESRPVKS--SSASSGNATSYTPPSGQRTPAKDGVSTEIYSD--KVRNRCIDVT 144
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
+ + A ++E +++ G + K RS+ N+ D KNP LR V
Sbjct: 145 YTALAVGMTAHPNEVLACAKAIENEVYKMENGTGGNYRPKMRSLYINLKDPKNPGLRGNV 204
Query: 225 LIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSN 284
+ G+++ ERL M+P+E+ASDE ++E EE++ + +F +++ TD+F C C +
Sbjct: 205 ISGKISAERLCRMSPQEMASDELKKEIEEMEKQNLFAARGATEQRAVTDRFTCGKCKQKK 264
Query: 285 CSYHQMQTRSADEPMTTYVTCAECNKRWK 313
SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 265 VSYYQMQTRSADEPLTTFCTCENCGTRWK 293
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 143/283 (50%), Gaps = 25/283 (8%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T +L T++G + L+ H + V A ++++ WK+ + + ++GS S D
Sbjct: 43 TEQILRETKIGMIVNKLRGHADKTVSELAKDIVNKWKKDVSM------KPKSGS--SSDA 94
Query: 105 KF---QKQTSDSNAVKSGCSTAKEKKATASIRK---PSHADQAKDSMR-DKIRKDL---E 154
K K+ + +N SG T + T S+ + S D K S + D + ++ +
Sbjct: 95 KGGVAMKKEASTNGGTSGKDTPNKSTPTPSVPRKTGGSSVDPMKRSHKTDGVECNIFGGD 154
Query: 155 KALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMG----VAEKRKHRSIMF 210
+ ++ + D I D ++A E ++ R G A + K RS+ F
Sbjct: 155 EVRTKSLAMIYDGLVIGALATPDDVFKLAKDTEHNLY---RNHGSKTDTAYRNKLRSLFF 211
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D KNP LR V+ G + P RLA M+ EE+AS ER++E+E+I+ + M + V +
Sbjct: 212 NLKDPKNPSLRNNVISGRIEPMRLALMSSEEMASAERKREDEKIEQENMKEAMVAKAPTS 271
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TDQ +C CGK N SY Q QTRSADEPMTT+ C +C RWK
Sbjct: 272 VTDQLRCGKCGKRNVSYSQAQTRSADEPMTTFCECLQCGNRWK 314
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 152/294 (51%), Gaps = 24/294 (8%)
Query: 28 EVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVL 86
+V R A K+ F V +L ST++G S+ ++K E+V + A L+ WK K++
Sbjct: 36 QVVRKEIACKYCTNFFVL--VLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLD 92
Query: 87 GKETNGNKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHAD 139
G T+ + S+ S + + + +S + + + + ++ ++ R P+ +D
Sbjct: 93 GPSTDKDSEEKKKEPAITSQNSPEAREESSSSGNVSSRKDETNTRDTYVSSFPRAPNTSD 152
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
+ R+ I L +A AD+EE+ + +E +++++R +
Sbjct: 153 SVRLKCREMIAAALRTGDDYIAI-GADEEEL------------GSQIEEAIYQEIRNTDM 199
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + +
Sbjct: 200 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 259
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 260 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 313
>gi|403178039|ref|XP_003336480.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375173311|gb|EFP92061.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 382
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 79/112 (70%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K K RS++FN+ D+ NP LR V+ GE++ RL M P+++AS+ER+ ++ ++ + +FK
Sbjct: 269 KIKMRSLIFNLRDKNNPGLRESVVSGEISASRLCVMGPQDMASEERKAQDRKLAEENLFK 328
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD F+C+ CG+ C+Y+QMQTRSADEPMTT+VTC CN RWK
Sbjct: 329 ARGAGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTCVNCNCRWK 380
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 21/270 (7%)
Query: 51 STQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSV------D 103
ST++G S+ ++K E+V + A L+ WK K++ G T + K
Sbjct: 22 STRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEKDPEEKKKEPAITSQNSP 80
Query: 104 EKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE 163
E ++ +S + + + + A++ ++ R PS +D + R+ + L VA
Sbjct: 81 EAREESSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAI- 139
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AD+EE+ + +E +++++R + K + RS + N+ D KNP+LR+
Sbjct: 140 GADEEEL------------GSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKN 187
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C C K
Sbjct: 188 VLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKK 247
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 NCTYTQVQTRSADEPMTTFVVCNECGNRWK 277
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 144/289 (49%), Gaps = 21/289 (7%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKE----TN 91
L+ L+ VT DLL T+ G ++ L+ H +V A E++ WK ++ K +
Sbjct: 31 LQKLRGHGVTEDLLKETKAGLAVGKLRSHANAQVAETAKEVVRRWKAEVEGQKSEKKAGS 90
Query: 92 GNKRNGSKLSVDEKFQKQTSDSNAVKSGC--STAKEKKATASIRKPSHADQAK-----DS 144
+ G+K + Q S + KS + + S+ + + D K D
Sbjct: 91 SSPSGGAKKVNPKPIQTSVPGSTSSKSPAPATAGPHTPLSPSLVRTTATDGVKLNDSGDE 150
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK 204
RD + L AL A+D +D++ A+ +++ E+V+ G + K
Sbjct: 151 KRDTCMRLLYDAL------ASDSTAPSDQI-AKIARKIE---EQVLSLNKNNSGNPYRTK 200
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
RS+ N+ ++ NP LR V+ GE++ RL TM+ +E+AS+ER+ E++ I+ + +FK +
Sbjct: 201 IRSLYLNLKEKSNPGLREAVVSGELSVPRLCTMSVQEMASEERQAESKRIEEQNLFKAKG 260
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E+ TD FKC CG Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 261 AEEAGAETDAFKCFRCGLRKTRYTQAQTRSADEPMTTFVTCVNCGNRWK 309
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 154/288 (53%), Gaps = 25/288 (8%)
Query: 36 LKHLQAF--PVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
LK L++ +T ++L T++G ++ +L+K E++ N A L+ WK+ +
Sbjct: 32 LKELRSLNNTITLEVLQKTRIGMAVNNLRKQSDQEEIINLAKVLIKGWKKLLP------- 84
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK-------DSM 145
++ GS S + K +++TS+ ++ S E ++ +I + S A + D +
Sbjct: 85 -QQGGSTPSTN-KSKEKTSNGDSGNSSDQGRGEGDSSKTINRQSSASSSSSFSSSGLDVV 142
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R++ ++ L AL + D EE+ +DP+++A +E ++ + + K +
Sbjct: 143 RERCKQMLVNALKVAIPDLDDGEEL------QDPEELAGIIEDCIYTEFGNSDLRYKNRV 196
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNPDLRR VL G + E++A+M EE+AS+ +Q ++ + + ++
Sbjct: 197 RSRVSNLQDSKNPDLRRMVLRGTIPAEKIASMAAEEMASEAMKQMRQKFTKEAINDHQLA 256
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + C C K NC+Y+QMQTRSADEPMTT+V C +C RWK
Sbjct: 257 HTEGTRSALLTCGKCRKKNCTYNQMQTRSADEPMTTFVFCNDCGHRWK 304
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 139/288 (48%), Gaps = 12/288 (4%)
Query: 30 QRCADALKHLQAFPVTYDLLVSTQVGKSLRHL-KKHPCEKVQNAASELLHIWKQKIVLGK 88
+ C+ L L P+ +++ T VG L + KK P E + A ++ WK +
Sbjct: 24 EECSKLLDELAKIPMNLEIIQKTSVGMKLNAMRKKFPDEALAKRAKSIIKEWKNIV---- 79
Query: 89 ETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQ-AKDSMRD 147
+G ++ + K Q++ S K ++ +P Q A S
Sbjct: 80 --DGKTKSQDDDAPPSKKQRKESVEEVKVEKKKLEAPYKKPETVNRPEIVAQFASASFPP 137
Query: 148 KIRKDLEKAL--SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
K ++ E L +++ A E+ D DP+++A +E ++ R
Sbjct: 138 KHLENDETRLKSAQLLLSALRYGELPD--GTLDPEELAVQIEEKLYSVHRDTNKNYSAAV 195
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS +FN+ D+KN LR VL G V E+ ATMT EE+AS E R+ E+ + + + +V
Sbjct: 196 RSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASPEIREMREKFTKEAILEHQVS 255
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ +D FKC CGK NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 256 VQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNRWK 303
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 38/291 (13%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L + ++L +T++G ++ +L+K E+ V A L+ WK
Sbjct: 31 DLLKVLGRLKINLNILTNTRIGMTVNNLRKTSKEEEVVTVAKSLIKTWK----------- 79
Query: 93 NKRNGSKLSVDEKFQKQTSD----------SNAVKSGCSTAKEKKATASIRKPSHADQAK 142
KF + SD S+ S + S +A
Sbjct: 80 ------------KFVPENSDKKKKEPEVEKSSTPSSVKEESSSSSKINGSGSKSFPQKAN 127
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
+ D +R + ++ A D + D + + P+++A +E +F + K
Sbjct: 128 INTTDDVRLRCREMITNALKGAGD---LPDGI-CKSPEELADLIEESIFSSNKSTSAKYK 183
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS +FN+ D+KNP LR VL G + P + A MT +E+ASDE +++ + +
Sbjct: 184 NQIRSRVFNLRDKKNPALRENVLTGIIEPSKFAVMTADEMASDEVKKQRAAFVKQGIDAS 243
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + + TD KC CGKS+C+Y+Q+QTRSADEPMTT+V C C RWK
Sbjct: 244 QLAQIQGTKTDLLKCGKCGKSDCTYNQIQTRSADEPMTTFVLCNACGNRWK 294
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 144/273 (52%), Gaps = 18/273 (6%)
Query: 49 LVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNKRN-------GSKL 100
L ST++G S+ ++K E+V + A L+ WK K++ G T+ + S+
Sbjct: 1 LQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDKDPEEKKKDTAITSQN 59
Query: 101 SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRV 160
S + + + +S + + + + A++ ++ R PS +D + R+ + L V
Sbjct: 60 SPEAREESSSSGNISSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYV 119
Query: 161 ASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDL 220
A AD+EE+ Q+ + +++++R + K + RS + N+ D KNP+L
Sbjct: 120 AI-GADEEELG--------SQIEEDILLPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNL 170
Query: 221 RRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGC 280
R+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C C
Sbjct: 171 RKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKC 230
Query: 281 GKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 231 KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 263
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 135/272 (49%), Gaps = 26/272 (9%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T LL T+VG ++ + ++ + +++ W+ + + NK+ G
Sbjct: 36 TEKLLRETKVGVAVNKYRSSTNSEISSIVKKMIRNWRDMV----QAEKNKKKGP------ 85
Query: 105 KFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKAL-SRVAS 162
TSD A SG ST +KE K + R P + D D R AL + +A
Sbjct: 86 -----TSDVKAATSGSSTPSKENKFHSGPRNPKIDGISTDIYDDSTRNASISALYTALAI 140
Query: 163 EAADDEEITDRVKARDPKQVAASVERVMF-EKLRPMGVAEKRKHRSIMFNMSDEKNPDLR 221
E D ++ VA S+E +F ++ + + K R+ + N+ ++KNP+LR
Sbjct: 141 ERGDS--------SQQILSVAKSIEAEVFKDEYSKVADGYRNKLRTFVMNLRNKKNPELR 192
Query: 222 RRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCG 281
R+L G++TP + M+P E+A + ++E E++ + +F + +K+ TD+F C C
Sbjct: 193 DRILSGQITPGKFVKMSPNEMAPETLKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCK 252
Query: 282 KSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 253 HKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 284
>gi|331242717|ref|XP_003334004.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312994|gb|EFP89585.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 382
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 79/112 (70%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K K RS++FN+ D+ NP LR V+ GE++ RL M P+++AS+ER+ ++ ++ + +FK
Sbjct: 269 KIKMRSLIFNLRDKNNPGLRESVVSGEISAGRLCVMGPQDMASEERKAQDRKLAEENLFK 328
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD F+C+ CG+ C+Y+QMQTRSADEPMTT+VTC CN RWK
Sbjct: 329 ARGAGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTCVNCNCRWK 380
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 141/311 (45%), Gaps = 35/311 (11%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA A SEP + LK LQ T DLL ST++G + LK+H + V
Sbjct: 9 KAKALTKAATSSEPPAN-IINILKELQKGVRPTEDLLRSTRIGIVVNKLKQHKAQDVARL 67
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI 132
+SE++ W+ E N K NGS + A + ST ++K+T
Sbjct: 68 SSEIVSKWRS------EVNKQKSNGSP---NPHRSSTPRTGTASPAPASTPGDRKSTVPP 118
Query: 133 RKPSHADQAKDS------MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASV 186
K S D+ +RD + LS +++E PK V A
Sbjct: 119 EKRSWKADGVDTNVTNNKVRDSCLGLMYDGLSFMSTEL--------------PKVVLAKA 164
Query: 187 ERVMFEKLRPMGVAEKRKH----RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
V G K ++ RS+ N+ ++ NP LR+RVL EVTPE+ MT EEL
Sbjct: 165 IAVEAAAFTSFGPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHEEL 224
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
SDERR +E+I + M K V + ++ + +C CG+ +Y + QTRSADEPMT +
Sbjct: 225 KSDERRALDEKIHKENMDKAMVAQAERSISSSLQCGKCGQRKVTYTEAQTRSADEPMTLF 284
Query: 303 VTCAECNKRWK 313
TC C K WK
Sbjct: 285 CTCLNCGKSWK 295
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 147/275 (53%), Gaps = 30/275 (10%)
Query: 51 STQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNKRN-------GSKLSV 102
ST++G S+ ++K E+V + A L+ WK K++ G ++ + S+ S
Sbjct: 22 STRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSSDKDPEEKKKEPAITSQNSP 80
Query: 103 DEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVAS 162
+ K + +S + + + + A++ ++ R PS +D S+R K R+ L AL R
Sbjct: 81 EAKEESSSSGTISSRKDETNARDTYVSSFPRAPSTSD----SVRLKCREMLAAAL-RTGD 135
Query: 163 E----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNP 218
+ AD+EE+ + +E +++++R + K + RS + N+ D KNP
Sbjct: 136 DYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNP 183
Query: 219 DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C
Sbjct: 184 NLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCG 243
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 244 KCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 278
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 79/116 (68%)
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
G K K R + FNM D KNPDLR + +GE++ + L +TPEEL S+ERRQ NE+I+
Sbjct: 9 GKDYKAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNERRQANEKIREF 68
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ ++++ +TD FKC C + C+Y+Q+QTRSADEPMTT+VTC C RWK
Sbjct: 69 AEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCGNRWK 124
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 148/296 (50%), Gaps = 31/296 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
+ LK LQ PV +LL T++G ++ L+K E+V + A L+ WK K + G
Sbjct: 30 ELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDEEVISLAKTLIKNWK-KFLSGSNKEK 88
Query: 93 NKRNGSKLSVDEKFQKQ------------TSDSNAVKSGCSTAKEKKATASI-RKPSH-- 137
+ + S + ++ + D N VK KE+K I RK S
Sbjct: 89 DSTSSSSSKKKDDKSEKNKDDGDQKKDKDSIDGNDVK-----MKEEKPHKDIQRKQSTFP 143
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
A D++R K R+ L AL RV + P+++A +E ++ + +
Sbjct: 144 APTTTDAVRLKCRELLAAAL-RVDGNTIEG--------CASPEELAEELEEAIYAEFKNT 194
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
K + RS + N+ D KNP+LR + G +TP RLA MT EE+ASDE +Q E+ K +
Sbjct: 195 DNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEIKQLREQFKKE 254
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 255 AINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 310
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 146/274 (53%), Gaps = 30/274 (10%)
Query: 52 TQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----KETNGNKRNGSKLSVD--E 104
T++G S+ ++K E+V + A L+ WK K++ G K+ + K+ + S + E
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEKDLDEKKKEPAITSQNSPE 81
Query: 105 KFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE 163
++ TS N T A++ ++ R PS +D S+R K R+ L AL R +
Sbjct: 82 AREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SVRLKCREMLAAAL-RTGDD 136
Query: 164 ----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPD 219
AD+EE+ + +E +++++R + K + RS + N+ D KNP+
Sbjct: 137 YIAIGADEEEL------------GSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPN 184
Query: 220 LRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSG 279
LR+ VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C
Sbjct: 185 LRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGK 244
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 245 CKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 278
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVD 103
VT +L T+ G ++ L+ H ++V + A E++ WK + K NG K +
Sbjct: 36 VTESILRETKAGLAVGKLRSHASKEVADNAKEIVKKWKSAVEKEKLANGGT---PKPQQN 92
Query: 104 EKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE 163
K +++ S + + + K S + D+ RDK + + AL V
Sbjct: 93 GKPERKMSSNISTPVTPTMTSGKPNGRSAKLDGVKGGTGDTTRDKCIELVYDAL--VNDS 150
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
+A E I R + VE+ + A K+K RS+ N+ D+ NP R
Sbjct: 151 SAPVELILSRARG---------VEKCVHHDNGGTTAAYKQKIRSLFVNLKDKNNPGFREN 201
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
V+ G+V E+LA MT E++AS+ER+ + +IK + +FK ++ TD F+C C +
Sbjct: 202 VISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFKSLSAAEQAAETDAFQCGRCKQR 261
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 262 QCRYRQAQTRSADEPMTTFVTCTNCGNRWK 291
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVD 103
VT +L T+ G ++ L+ H ++V + A E++ WK + K NG K +
Sbjct: 36 VTESILRETKAGLAVGKLRSHASKEVADNAKEIVKKWKSAVEKEKLANGGT---PKPQQN 92
Query: 104 EKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE 163
K +++ S + + + K S + D+ RDK + + AL V
Sbjct: 93 GKPERKMSSNISTPVTPTMTSGKPNGRSAKLDGVKGGTGDTTRDKCIELVYDAL--VNDS 150
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
+A E I R + VE+ + A K+K RS+ N+ D+ NP R
Sbjct: 151 SAPVELILSRARG---------VEKCVHHDNGGTTAAYKQKIRSLFVNLKDKNNPGFREN 201
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
V+ G+V E+LA MT E++AS+ER+ + +IK + +FK ++ TD F+C C +
Sbjct: 202 VISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFKSLSAAEQAAETDAFQCGRCKQR 261
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 262 QCRYRQAQTRSADEPMTTFVTCTNCGNRWK 291
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK---VQNAASELLHIWKQKIVLG--- 87
D L+ LQ + D+L T++G ++ L+K C K V + A L+ WK+ +
Sbjct: 27 DLLRELQRLNIDLDILTKTRIGMTVNELRK--CSKDDEVISLAKSLIKSWKRFLAATPPS 84
Query: 88 KETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRD 147
KE++ S S + D KEKK T + PS D++R
Sbjct: 85 KESSKESSKSSSKSSSKSSSGGKGDDRKKDLEKEKEKEKKPTQTSFPPSS--NTTDAVRL 142
Query: 148 KIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRS 207
K R+ L A+ RV E + + P+++ +E +F + R + K + RS
Sbjct: 143 KCREMLASAI-RVDGEPPEG--------CQTPEELGDELEEAIFSEFRNTDMKYKNRVRS 193
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
+ N+ D KNP LR + G +T +RLA MTPEE+ASDE + + + + ++
Sbjct: 194 RVANLKDLKNPSLRSNYINGAITAQRLAKMTPEEMASDEMKNLRDRFVKEAINDAQLATN 253
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD KC C K NC+Y+Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 254 QGTKTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 299
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 145/287 (50%), Gaps = 16/287 (5%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIV-----LG 87
D LK L+ P+T +LL ST++G S+ ++K + +V + A L+ WK+ +
Sbjct: 30 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKSLIKSWKKLLDEPAADKN 89
Query: 88 KETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAK-EKKATASIRKPSHADQAKDSMR 146
E +R +S E + +S++ S + + I A DS+R
Sbjct: 90 SEEKKKERTTPVVSPSETSPEPREESSSSNSSSKSESVDVTPNTLIATFPRAPGTSDSVR 149
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
K R+ L AL D+ IT D ++ A +E +F + + + K + R
Sbjct: 150 IKCREMLSNALQ------TGDDYIT---IGSDCDELGAQIEECIFLEFKNTDMKYKNRVR 200
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+ D KNP+LRR VL G V+P+R+A MT EE+ASDE ++ + + + + +V
Sbjct: 201 SRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAEEMASDELKEMRKNLTKEAIRDHQVAT 260
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F C C K C+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 261 SGGTQTDLFTCGKCKKKKCTYTQVQTRSADEPMTTFVFCNECGNRWK 307
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 170/362 (46%), Gaps = 63/362 (17%)
Query: 3 KKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
K L+ G + A A S + + D LK L + ++ LL +T++G ++ ++
Sbjct: 6 KALIAKSGDLSVISGAHMAEGESLLQQEGALDLLKKLNSCQMSIQLLQTTRIGVAVNRVR 65
Query: 63 KHPCEK-VQNAASELLHIWKQKIVLGKETNGN---------------------------- 93
KH +K V + A L+ WK+ + + T G
Sbjct: 66 KHCSDKEVVSLAKVLIKNWKRLLDSPRTTKGEREERDKAKKKEKGLGCSDWKPEAGLSPS 125
Query: 94 -KRNGS-----KLSVDEKFQKQTSD-------SNAVKSGCSTAKEKKATASIRKPSHADQ 140
K+ G + SVD + +S SN+V S T K + ++ P+ A
Sbjct: 126 RKKGGGEPKARRDSVDSRSSTTSSPKRPPMERSNSVGSKVETPKTPSSPST---PTFAPS 182
Query: 141 A---------KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMF 191
DS+RDK + L AL +A DD D D ++A+ +E ++
Sbjct: 183 VCLLAPCYLTGDSVRDKCVEMLSAAL-----KAEDD--FKDYGVNCD--KLASEIEDHIY 233
Query: 192 EKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQEN 251
++L+ + + + RS + N+ D +NP LRR VL G ++P +A MT EE+ASDE R+
Sbjct: 234 QELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDELRELR 293
Query: 252 EEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKR 311
+ + + + ++ + TTD +CS C K NC+Y+Q+QTRSADEPMTT+V C EC R
Sbjct: 294 NAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNR 353
Query: 312 WK 313
WK
Sbjct: 354 WK 355
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 145/310 (46%), Gaps = 44/310 (14%)
Query: 28 EVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLG 87
++ D L+ L++ P+T ++L T++G+++ L+KH EK+QN + L+H WK + L
Sbjct: 21 DIGEALDLLRALESKPITVNILKETKLGQTVAKLRKHDSEKIQNQSRNLIHSWKSILTLS 80
Query: 88 KETNGNKRNGSKLS--VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
TN + S LS K S + KS ++K T S S D M
Sbjct: 81 PRTNSS----SSLSPTAAGTLAKSASSISKPKSPSVETPKRKETKSSSSASFLPPGLDKM 136
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK- 204
R +R +++ L E AD D A D VA ++E M E +K
Sbjct: 137 RATVRTKMKENL-----ELAD----ADTSNAPD---VATAIEIAMARMFSVGFPGENKKD 184
Query: 205 ----HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKA---- 256
R + FN+ +KN LR +L+ V+ E+L M+PEELA+DE+R E E+++
Sbjct: 185 YTAKFRQLSFNL--KKNARLREDLLLDVVSAEQLINMSPEELATDEKRHEIEKLRDDAFQ 242
Query: 257 ------------KFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVT 304
K +C + + KG F C C S S Q QTRSADEPMT +V
Sbjct: 243 RARLDWADANEDKINKQCGIEKNSKGL---FTCGRCKSSKTSNTQKQTRSADEPMTVFVQ 299
Query: 305 CAECNKRWKC 314
C C RWKC
Sbjct: 300 CHNCGNRWKC 309
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 143/271 (52%), Gaps = 22/271 (8%)
Query: 51 STQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNKRNGSK-LSVDEKFQK 108
ST++G S+ ++K E+V + A L+ WK K++ G T+ + K ++ +
Sbjct: 22 STRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDKDSDEKKKEPAISSQNSP 80
Query: 109 QTSDSNAVKSGCSTAKEKKATASIRKPSH--ADQAKDSMRDKIRKDLEKALSRVASE--- 163
+ + ++ S S KE+ + PS A DS+R K R+ L AL R +
Sbjct: 81 EAKEESSSSSNASNRKEETDASDSFIPSFPRAPSTSDSVRMKCREMLAAAL-RTGDDYIA 139
Query: 164 -AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
AD+EE+ + +E ++++LR + K + RS + N+ D KNP+LR+
Sbjct: 140 IGADEEEL------------GSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRK 187
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
VL G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C C K
Sbjct: 188 NVLCGNIPPDLFARMTAEEMASDELKEIRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKK 247
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 KNCTYTQVQTRSADEPMTTFVVCNECGNRWK 278
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 143/291 (49%), Gaps = 33/291 (11%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST+VG ++ LK+H +V ASE++ W+ ++ K+ G
Sbjct: 32 LKQLQQGVKATEDLLRSTRVGIAVNKLKQHKSPEVARLASEIVSKWRHEV--NKQKAGAS 89
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI---RKPSHAD-----QAKDSMR 146
S+ S K +N SG +T +K + S+ ++ AD Q + +R
Sbjct: 90 PGASQRSSSSPHPK----TNGTPSGGATPSDKASKLSVPPDKRTWKADGVDTNQTGNRIR 145
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVMFEKLRPMGVAEKR 203
D + L + E P+ V A++VE F L P + R
Sbjct: 146 DSCIGLMYDGLCLNSVEP--------------PRTVLSKASAVEAAAFSDLGPETKEQYR 191
Query: 204 -KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
K RS+ N+ ++ NP LR RVL G+VTPER M+ +EL S+E+++ + I+ + M K
Sbjct: 192 TKIRSLYQNLKNKSNPSLRVRVLNGDVTPERFVRMSHDELRSEEQQERDRRIQKENMDKA 251
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
V + ++ + +C CG+ +Y + QTRSADEPMT + TC C K WK
Sbjct: 252 MVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSWK 302
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 161/331 (48%), Gaps = 63/331 (19%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+ + + T G
Sbjct: 28 DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPRTTKG 87
Query: 93 N-----------------------------KRNGS-----KLSVDEKFQKQTSD------ 112
K+ G + SVD + +S
Sbjct: 88 EREAREKAKKKEKGLGSSGWKPEAGLSPPRKKEGGEPKTRRDSVDSRSSTTSSPKRPSLE 147
Query: 113 -SNAVKSGCSTAKEKKATASIRKPSHADQA---------KDSMRDKIRKDLEKALSRVAS 162
SN+ +S T K + ++ P+ A DS+RDK + L AL
Sbjct: 148 RSNSSRSKVETPKTPSSPST---PTFAPAVCLLASCYLTGDSVRDKCVEMLSAAL----- 199
Query: 163 EAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
+A DD D D ++A+ +E ++++L+ + + + RS + N+ D +NP LRR
Sbjct: 200 KAEDD--FKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRR 255
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
VL G ++PE +A MT EE+ASDE R+ + + + + ++ + TTD +CS C K
Sbjct: 256 NVLSGTISPELIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKK 315
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 316 KNCTYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 146/308 (47%), Gaps = 30/308 (9%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA AAA+ S + LK LQ T DLL ST++G + LK+H V
Sbjct: 11 KALTKAAASGESSATI---VSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPDVARL 67
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI 132
ASE++ W+ E N K+ S ++ D K +S+ N + + K + +T
Sbjct: 68 ASEIVSKWRA------EVNKQKKTASPVASDSP--KPSSNGNGTPASAANDKPQSSTVHP 119
Query: 133 RKPSH-ADQAKDSM-----RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASV 186
K S ADQ ++ RD + L ++E + R Q A V
Sbjct: 120 DKRSWKADQVNTAVTGVKARDSCLGLMYDGLCLGSTEPS-----------RTVLQKATEV 168
Query: 187 ERVMFEKLRP-MGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD 245
E F+ P A + K RS+ N+ ++ N LR RVL E+ P+R MT +EL SD
Sbjct: 169 EAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEIAPDRFVNMTHDELKSD 228
Query: 246 ERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTC 305
ERR+E+ +I+ + M K V + ++ + +C CG+ +Y + QTR+ADEPMT + TC
Sbjct: 229 ERREEDLKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTYTEAQTRAADEPMTLFCTC 288
Query: 306 AECNKRWK 313
C K W+
Sbjct: 289 LACGKSWR 296
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 154/325 (47%), Gaps = 41/325 (12%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
M K +V L K + AA A N E ++ LK+ F VT +L ++ G ++
Sbjct: 1 MSKDVVELKKNVKALSQAAGAKN--EGDIISILKILKN--EFDVTEQILRESKAGLAVGK 56
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAV---- 116
L+ H +++ A E++ WK + +K+ G K + ++ +NA
Sbjct: 57 LRSHDSKEISTLAKEIVRKWKTAV--------DKQKGGKTT-----SAASTPTNAAPKPA 103
Query: 117 KSGCSTAKEKKATASIRKP-------SHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
+G ++ K T + P + D +RDK + L AL A+D
Sbjct: 104 ATGTGSSNNKAPTPTSAGPLRTAKSDGVTGRTGDKVRDKCVELLYDAL------ASDSTA 157
Query: 170 ITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGE 228
+ V R A+ VE +F L+ E R K RS+ N+ D+ NP L+ ++ GE
Sbjct: 158 PIEMVLKR-----ASEVEEAVFN-LKGGANQEYRGKIRSLYVNLKDKNNPTLKEDIVSGE 211
Query: 229 VTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYH 288
+ R A MT EE+AS+E++ ++I + +FK ++ TD F+CS C + C Y
Sbjct: 212 IPASRFAVMTSEEMASEEQKAALKKIHEENLFKSLAAQEADAETDAFQCSKCKQRKCRYR 271
Query: 289 QMQTRSADEPMTTYVTCAECNKRWK 313
Q QTRSADEPMTT+VTC C RWK
Sbjct: 272 QAQTRSADEPMTTFVTCVVCGNRWK 296
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 147/311 (47%), Gaps = 27/311 (8%)
Query: 8 LFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC- 66
+FG +AA A S P L P + ST+VG S+ L+K
Sbjct: 153 VFGPPLRAAPAPFLLP-SRPGHPHGPSPAPQLSPLPRS-----STRVGMSVNALRKQSSD 206
Query: 67 EKVQNAASELLHIWKQKIVLGKETNGNKRN-GSKLSVDEKFQKQTSDSNAVKSGCSTAKE 125
E+V A L+ WK K++ + +R G+ L + + D + + A
Sbjct: 207 EEVIALAKSLIKSWK-KLLDASDAKARERGRGTPLPTSSRDASEAPDPSRKRPELPRAP- 264
Query: 126 KKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDR---VKARDPKQV 182
+T I D++R K R+ L AL TDR D +++
Sbjct: 265 --STPRITTFPPVPVTCDAVRSKCREMLAAALQ------------TDRDHVAIGADCERL 310
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
+A +E +F + + K + RS + N+ D KNPDLRR VL G +TP+++A MT EE+
Sbjct: 311 SAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEM 370
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
ASDE ++ + + + + + ++ TD F C C K NC+Y Q+QTRS+DEPMTT+
Sbjct: 371 ASDELKEIRKTMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTF 430
Query: 303 VTCAECNKRWK 313
V C EC RWK
Sbjct: 431 VVCNECGNRWK 441
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 51/291 (17%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 111 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 169
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGC----------STAKEKKATASIRKPSHADQAK 142
+ K D Q S +S + A++ ++ R PS +D
Sbjct: 170 DPEEKKK---DTTITSQNSPEAREESSSSGSVSSRKEETNARDTYVSSFPRAPSTSD--- 223
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
S+R K R+ L AL R D + +RV++R
Sbjct: 224 -SVRLKCREMLAAAL-RTGEIRNTDMKYKNRVRSR------------------------- 256
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ N+ D KNP+LR+ VL G ++P+ A MT EE+ASDE ++ + + + + +
Sbjct: 257 ------ISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEAIREH 310
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 311 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 361
>gi|328767604|gb|EGF77653.1| hypothetical protein BATDEDRAFT_91451 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 25/311 (8%)
Query: 5 LVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKH 64
L+T K+ A A N+ + +Q L L+ F T + L ST++G L+KH
Sbjct: 7 LITQIPKLKEHLTKALADNKEQIVIQ----LLTTLRTFKATTETLKSTRIGVFATELRKH 62
Query: 65 P--CEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCST 122
P EK++ + EL++ WK I G+ + K +D +S + S T
Sbjct: 63 PNATEKIKQLSRELVYKWKTDI--GRVSMSESSESEKKQIDTPKTSTSSSVSTPTSTTHT 120
Query: 123 AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
A A+ ++ S D+ +D + L VAS A ++
Sbjct: 121 APRTLASDNVTLSSTRDKIRDGCAGMLYSSLASGTDAVASVVA---------------KI 165
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A+S+E+ +F K + R++ N+ + N LR +VL G+++ +R A MT EE+
Sbjct: 166 ASSIEKHIFAACECTDAKYKSRIRTLTSNL--KLNASLRSQVLGGKISTDRFAMMTAEEM 223
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
S+ER E E+ K M ++ TD F+C C + +Y+QMQTRSADEPMTT+
Sbjct: 224 MSEERVLEVEKAKKNSMADAVSAANQEAETDMFRCGRCKQRKATYYQMQTRSADEPMTTF 283
Query: 303 VTCAECNKRWK 313
VTC C +WK
Sbjct: 284 VTCCHCGNKWK 294
>gi|303321710|ref|XP_003070849.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110546|gb|EER28704.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320040335|gb|EFW22268.1| transcription elongation factor S-II [Coccidioides posadasii str.
Silveira]
gi|392862246|gb|EAS37125.2| transcription elongation factor S-II [Coccidioides immitis RS]
Length = 303
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 145/288 (50%), Gaps = 25/288 (8%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL +T++G ++ LK H V AS+++H W+ ++ K+ G
Sbjct: 30 LKDLQNGVRPTEDLLRATKIGITVNRLKTHKHPDVARLASDIVHKWRHEV--NKQKTGAS 87
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI---RKPSHADQA-----KDSMR 146
GS+ S D KQT + A ++ + A +K + +++ ++ ADQ ++ R
Sbjct: 88 PVGSQRSSDSP--KQTPNGMATQTSGAEASDKMSKSTVPPDKRSWKADQVNTAHTQNKTR 145
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KH 205
D L L ++E+ R Q + VE + P + R K
Sbjct: 146 DSCIGLLYDGLCLNSTESP-----------RTVLQKSIEVEAAAYSVFGPETKEQYRTKI 194
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS+ N+ ++ NP LR RVL E+ P++ MT +EL SDERR+E+ +I+ + M K V
Sbjct: 195 RSLYQNLRNKSNPALRVRVLSNEIAPDKFVRMTHDELKSDERREEDRKIEKENMDKAMVA 254
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + +C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 255 KAERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 302
>gi|15233998|ref|NP_193607.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|4539391|emb|CAB37457.1| putative protein [Arabidopsis thaliana]
gi|7268666|emb|CAB78874.1| putative protein [Arabidopsis thaliana]
gi|332658681|gb|AEE84081.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 266
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 124/247 (50%), Gaps = 40/247 (16%)
Query: 3 KKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFP--VTYDLLVSTQVGKSLRH 60
++ + LF AA +AA + S PEV R DA+ L+ P + D++ T +G+ L
Sbjct: 4 REFMELFEAALRAAKSVKGDENS-PEVSRFVDAMNRLKEAPKSLVCDVVCKTSMGQGLEF 62
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVL-GKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSG 119
H K+++ L +W + G+E + + R
Sbjct: 63 FIDHKNPKIRSEGRILRDLWMKFFYASGREKSRDNRE----------------------- 99
Query: 120 CSTAKEKKATASIRKPSHADQAK--DSMRDKIRKDLEKALSRVASEAADDEEITDRVKAR 177
A+++ P+HA K DS RDK+R+ L+ +L++VASE D E T RV A
Sbjct: 100 ----------AAVKIPTHATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKT-RVTAC 148
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP VA SVE MFE L +K K+RSI+FNM D NPDLRR+VL+GE++ ERL M
Sbjct: 149 DPWVVAVSVETAMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKM 208
Query: 238 TPEELAS 244
EE+ S
Sbjct: 209 EKEEMGS 215
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 143/271 (52%), Gaps = 22/271 (8%)
Query: 51 STQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNGNKRNGSK-LSVDEKFQK 108
ST++G S+ ++K E+V + A L+ WK K++ G T+ + K ++ +
Sbjct: 22 STRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDKDSDEKKKEPAISSQNSP 80
Query: 109 QTSDSNAVKSGCSTAKEKKATASIRKPSH--ADQAKDSMRDKIRKDLEKALSRVASE--- 163
+ + ++ S S KE+ + PS A DS+R K R+ L AL R +
Sbjct: 81 EAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSDSVRMKCREMLAAAL-RTGDDYIA 139
Query: 164 -AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
AD+EE+ + +E ++++LR + K + RS + N+ D KNP+LR+
Sbjct: 140 IGADEEEL------------GSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRK 187
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
VL G + P+ A +T EE+ASDE ++ + + + + + ++ + TD F C C K
Sbjct: 188 NVLCGNIPPDLFARLTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKK 247
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 KNCTYTQVQTRSADEPMTTFVVCNECGNRWK 278
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 31/321 (9%)
Query: 8 LFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-C 66
+F KK + + +++ S E + D LK LQ + ++L T++G ++ L+K
Sbjct: 7 VFRIQKKMSKISTSSDGSGQE--QALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKD 64
Query: 67 EKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTA--- 123
++V A L+ WK+ + T N N + D + S++ KS
Sbjct: 65 DEVIALAKTLIKNWKRFLASPAPTTPN--NSTAAGKDSSNSSASKSSSSSKSASKEKSSS 122
Query: 124 ---------KEKKATASIRKPSHADQAKDSMRDKIRKDLEKAL--SRVASEAADDEEITD 172
+E+K +S + + D++R K R+ L AL V A+
Sbjct: 123 SSSSSSRDKREEKKVSSSQTSFPSGGMTDAVRLKCREMLTTALKMGEVPEGCAE------ 176
Query: 173 RVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
P+++AA +E ++ + + + K + RS + N+ D KNP LR + G V+ +
Sbjct: 177 ------PEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAK 230
Query: 233 RLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQT 292
+LA MTPEE+ASDE ++ E+ + + ++ + TD KC C K NC+Y+Q+QT
Sbjct: 231 QLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQT 290
Query: 293 RSADEPMTTYVTCAECNKRWK 313
RSADEPMTT+V C EC RWK
Sbjct: 291 RSADEPMTTFVMCNECGNRWK 311
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 140/329 (42%), Gaps = 59/329 (17%)
Query: 5 LVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKH 64
L TL + AAD A + R D LK LQ VT +LL T GK L KH
Sbjct: 13 LKTLESCGRGAADGDRA------DESRMLDVLKQLQKGLVTAELLKRTNAGKRLNKFCKH 66
Query: 65 PCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQ--------------- 109
C V AA + WKQ + K+ G + D Q++
Sbjct: 67 SCVSVAQAAKAAVEAWKQCV---KQEQQQNDGGEAETPDAVAQREAPASTSQPGLRAPLA 123
Query: 110 -TSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDE 168
T ++A+ SG + + I P + RDK+R L +AL+ +
Sbjct: 124 LTGKASAMTSGVGAGQRPTCASFIVDPPRCG---NDTRDKVRVMLAEALAVGFNSGG--- 177
Query: 169 EITDRVKARDPKQVAASVERVMFEKLRPMGVA----EKRKHRSIMFNMSDEKNPDLRRRV 224
A +E + E L G + K K RS+ FN+ D KNPDLR RV
Sbjct: 178 ---------------AVIEDALHELLAGSGSSVSGEYKAKARSLCFNLKDAKNPDLRERV 222
Query: 225 LIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSN 284
L G + PE L M+ EELASDE++++N E+K + TTD F+C C +
Sbjct: 223 LSGSIPPESLVRMSAEELASDEQKRKNREMKEWLAKEATRGVNNAATTDMFQCGRCKQRK 282
Query: 285 CSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C+Y+ PMTT+VTC C +RWK
Sbjct: 283 CTYY---------PMTTFVTCTNCGQRWK 302
>gi|119195887|ref|XP_001248547.1| hypothetical protein CIMG_02318 [Coccidioides immitis RS]
Length = 324
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 145/288 (50%), Gaps = 25/288 (8%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL +T++G ++ LK H V AS+++H W+ ++ K+ G
Sbjct: 30 LKDLQNGVRPTEDLLRATKIGITVNRLKTHKHPDVARLASDIVHKWRHEV--NKQKTGAS 87
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI---RKPSHADQA-----KDSMR 146
GS+ S D KQT + A ++ + A +K + +++ ++ ADQ ++ R
Sbjct: 88 PVGSQRSSDSP--KQTPNGMATQTSGAEASDKMSKSTVPPDKRSWKADQVNTAHTQNKTR 145
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KH 205
D L L ++E+ R Q + VE + P + R K
Sbjct: 146 DSCIGLLYDGLCLNSTESP-----------RTVLQKSIEVEAAAYSVFGPETKEQYRTKI 194
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS+ N+ ++ NP LR RVL E+ P++ MT +EL SDERR+E+ +I+ + M K V
Sbjct: 195 RSLYQNLRNKSNPALRVRVLSNEIAPDKFVRMTHDELKSDERREEDRKIEKENMDKAMVA 254
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + +C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 255 KAERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 302
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 144/293 (49%), Gaps = 23/293 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
D LK LQ + D+L T++G ++ L+K ++V A L+ WK+ + T
Sbjct: 29 DLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTP 88
Query: 93 NKRNG------------SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQ 140
N + S + D ++ S ++K +T+S + +
Sbjct: 89 NNSSAKEGSSNNSSASKSTSAAKSSSSISGKDKSSSSSSSKDKEKKGSTSSSQTSFPSGG 148
Query: 141 AKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
D++R K R+ L AL E + +P+++AA +E ++ + +
Sbjct: 149 MTDAVRIKCREMLATALK--IGEVPEG--------CGEPEEMAAELEDAIYSEFNNTDMK 198
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
K + RS + N+ D KNP LR + G VT ++LA MTPEE+ASDE ++ E+ + +
Sbjct: 199 YKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAIN 258
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD KC+ C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 259 DAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 311
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 148/293 (50%), Gaps = 23/293 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVL------ 86
D LK LQ + D+L T++G ++ L+K ++V A L+ WK+ +
Sbjct: 29 DLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTP 88
Query: 87 ----GKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQA- 141
KE + N + SK + K +S + S S+ ++K +S S
Sbjct: 89 NHSSAKEGSTNNSSASKSTSGAKSSTSSSGKDKSSSSSSSKDKEKKGSSSTSQSSFPSGG 148
Query: 142 -KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
D++R K R+ L AL E + +P+++AA +E ++ + + +
Sbjct: 149 MTDAVRIKCREMLAAALK--IGEVPEG--------CGEPEEMAAELEDAIYSEFKNTDMK 198
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
K + RS + N+ D KNP LR + G VT ++LA MTPEE+ASDE ++ E+ + +
Sbjct: 199 YKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAIN 258
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD KC+ C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 259 DAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 311
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T +LL T++G + L+ H EKV A E++ WK + + SK S
Sbjct: 39 TEELLKETRLGLVVGKLRSHSNEKVSEQAREIVKKWKADVT--------HKRPSKTSQST 90
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRD-KIRKDLEKALSRVASE 163
+ S + KKA ++ ++ D ++ D +IR + + + +
Sbjct: 91 SSSSASVAVQKTSSAAVSQLTKKAESNAQRTFKTDNVSINVTDDRIRNN---CIGLLYNA 147
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
A D TD + K +A +V+ + A + K RS+ N+ D++NP LR+R
Sbjct: 148 LAMD---TDEPSSVLLKTASAIDVQVLSMSMGKTDSAYRNKMRSLYMNLKDKQNPQLRKR 204
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
V+ G ++P+RL+ M+ ELAS++RR+E+ +++ + +F + + +K TD F C C +
Sbjct: 205 VISGAISPKRLSEMSSAELASEDRRKEDAKLEQENLFHAQGAKPQKAITDLFTCGKCKQK 264
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
SY QMQTRSADEPMTT+ C C RWK
Sbjct: 265 KVSYFQMQTRSADEPMTTFCECTVCGNRWK 294
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 147/312 (47%), Gaps = 37/312 (11%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA A SEP LK LQ T DLL ST++G + LK+H V
Sbjct: 9 KAKALTKAATSSEPPANLIT-ILKELQKGVRPTEDLLRSTRIGIVVNKLKQHKAPDVARL 67
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTS--DSNAVKSGCSTAKEK--KA 128
+SE++ W+ E N K NGS Q+ ++ A + ST EK K+
Sbjct: 68 SSEIVSRWRS------EVNKQKSNGSP-------QRSSTPRTGTASPAPVSTPSEKALKS 114
Query: 129 TASIRKPSHADQAKDS------MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
T K S D+ RD + LS +++E+ T V +
Sbjct: 115 TVPPEKRSWKADGVDTNVTNNKTRDSCLGLMYDGLSFMSTES------TKIVLTK----- 163
Query: 183 AASVERVMFEKLRPMGVAE-KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
A +VE F P + K K RS+ N+ ++ NP LR+RVL G+VTP++ MT +E
Sbjct: 164 AIAVEAAAFTSFGPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSGDVTPDKFVNMTHDE 223
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
L SDERR +++I+ + M K V + ++ + +C CG+ +Y + QTRSADEPMT
Sbjct: 224 LKSDERRALDQKIQKENMDKAMVAQAERSISSSLQCGKCGQRKVTYTEAQTRSADEPMTL 283
Query: 302 YVTCAECNKRWK 313
+ TC C K WK
Sbjct: 284 FCTCLNCGKSWK 295
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 78/112 (69%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
+ K RS+ N+ D+ NPDLR RV+ ++ ++L TMT EELASD+R++E EE++ + +FK
Sbjct: 208 RNKVRSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTNEELASDKRKREIEELQMQNLFK 267
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ TD F+C C + Y+QMQTRSADEPMTT+VTC CN +WK
Sbjct: 268 AKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWK 319
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 163/329 (49%), Gaps = 59/329 (17%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+ + G
Sbjct: 28 DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPLKG 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKK---------------ATASIRKPS- 136
K + + ++ + SD ++G S +EK+ AT+S R+PS
Sbjct: 88 EKGEEREKAKKKEKRLDCSDWKP-EAGLSPPREKREEPQTRRDSADSKSSATSSPRRPSV 146
Query: 137 ---HADQAK-----------------------------DSMRDKIRKDLEKALSRVASEA 164
++ ++K DS+RDK + L AL
Sbjct: 147 ERSNSSKSKAESPKTPSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAALK------ 200
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
ADD+ V ++A+ +E ++++L+ + + + RS + N+ D +NP LRR V
Sbjct: 201 ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNV 257
Query: 225 LIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSN 284
L G ++ +A MT EE+ASDE R+ + + + + ++ + TTD F+CS C K N
Sbjct: 258 LSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKN 317
Query: 285 CSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 318 CTYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 136/286 (47%), Gaps = 27/286 (9%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST++G + LK+H +V +SE++ W+ E N K
Sbjct: 30 LKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPEVARLSSEIVSKWRA------EVNKQK 83
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH-ADQAKDSM-----RDK 148
+ S S D K T + N+ + + K +K+ K S DQ ++ RD
Sbjct: 84 KIASPGSSDSP--KPTPNGNSTVASAADDKTQKSNVPPDKRSWKTDQVNTAVTGVKARDS 141
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRS 207
+ L ++E R Q A VE F P R K RS
Sbjct: 142 CIGLMYDGLCLGSTETP-----------RAVLQKATEVEAAAFNTYGPETKESYRTKIRS 190
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
+ N+ + N LR RVL GEVTP+R +MT EEL SDERR+E+ +I+ + M K V +
Sbjct: 191 LYQNLKQKSNLSLRTRVLTGEVTPDRFVSMTHEELKSDERREEDRKIQKENMDKAMVGQP 250
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + +C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 251 ERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 70/334 (20%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKI-------- 84
D LK LQ + ++L T++G ++ L+K ++V A L+ WK+ +
Sbjct: 31 DLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPPAA 90
Query: 85 -----------VLGKETNG--NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATAS 131
KE+ G NK +G S + K S+A KS KEK ++ S
Sbjct: 91 AGNQTPKESGGTAAKESGGASNKESGGAASNNNK------SSSAGKSNSLANKEKSSSGS 144
Query: 132 IRKPSHADQ--------------------------------AKDSMRDKIRKDLEKALSR 159
+ D+ KD++R K R+ L AL
Sbjct: 145 NSSSTVKDKREEKKSSSSSSSTSSSSASSAQTTFPSGGGGGMKDAVRLKCREMLATALKM 204
Query: 160 VASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPD 219
E+ D +P+++AA +E ++ + + + K + RS + N+ D KNP
Sbjct: 205 --------GEVPDGCA--EPEEMAAELEDAIYMEFKNTDMKYKNRIRSRVANLKDPKNPG 254
Query: 220 LRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSG 279
LR + G V+ ++LA MTPEE+ASDE ++ E+ + + ++ + TD KC
Sbjct: 255 LRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGK 314
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 315 CKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 348
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 141/308 (45%), Gaps = 38/308 (12%)
Query: 22 TNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWK 81
+N +E ++ LK Q VT LL ++ G ++ L+ H V + A E++ WK
Sbjct: 16 SNPTEQDILGILQTLKEQQI--VTEALLRESKAGLAVGKLRTHASRVVADLAKEIVKKWK 73
Query: 82 QKIVLGKETNGNKRNGSKLSVDEKFQKQT----------------SDSNAVKSGCSTAKE 125
Q + K+ G K + + +KQ+ + SN +KS TAK
Sbjct: 74 QAVEQEKQ-GGGKSPTTNAATKLPLRKQSTSVPPPTPTTPSSTAGTPSN-IKSDVRTAKS 131
Query: 126 KKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAAS 185
A D+ RDK + + AL+ A E+I + KA
Sbjct: 132 DGVVI-------AKMTGDATRDKCLELIYDALA--FDSGAPSEQILGKAKA--------- 173
Query: 186 VERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD 245
+E + A K K R++ N+ D+ NP LR V+ G++ R MT E+AS+
Sbjct: 174 IEAAALTDNGGVTAAYKAKIRTLFVNLKDKNNPGLRESVVAGDLPVTRFCKMTSAEMASE 233
Query: 246 ERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTC 305
ER+ + I+ + +FK E+ + TD F+C C + C Y Q QTRSADEPMTT+VTC
Sbjct: 234 ERKAADNRIREENLFKTLGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTC 293
Query: 306 AECNKRWK 313
CN RWK
Sbjct: 294 TVCNNRWK 301
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 144/291 (49%), Gaps = 21/291 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
D LK LQ + D+L T++G ++ L+K ++V A L+ WK+ + T
Sbjct: 29 DLLKTLQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTA 88
Query: 93 NK---RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK------- 142
N + GS + + S++ SG + ++ K + Q
Sbjct: 89 NNSSAKEGSSHNSSASKSTSAAKSSSSFSGKDKSSSSSSSKDKEKKGSSSQTSFPSGGMT 148
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D++R K R+ L AL E + +P+++AA +E ++ + + K
Sbjct: 149 DAVRIKCREMLATALK--IGEVPEG--------CGEPEEMAAELEDAIYSEFNNTDMKYK 198
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP LR + G VT ++LA MTPEE+ASDE ++ E+ + +
Sbjct: 199 NRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARMTPEEMASDEMKKLREKFVKEAINDA 258
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD KC+ C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 259 QLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 309
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 141/288 (48%), Gaps = 31/288 (10%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST++G + LK+H V +SE++ W+ E N K
Sbjct: 30 LKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPDVARLSSEIVSKWRA------EVNKQK 83
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI---RKPSHADQAKDSM-----R 146
+ S S D K T N + S A +K ++++ ++ ADQ S+ R
Sbjct: 84 KTASPGSSDSP--KPTP--NGTSTPASAANDKAQSSNVPPDKRSWKADQVNTSVTGVKAR 139
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRP-MGVAEKRKH 205
D + L ++E++ + + + A VE F+ P A + K
Sbjct: 140 DSCVGLMYDGLCLGSTESS--QAVLRK---------ATDVEAAAFKAFGPETKEAYRTKI 188
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS+ N+ ++ N LR RVL EVTPER MT EEL SDERR+E+ +I+ + M K V
Sbjct: 189 RSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAMVG 248
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + +C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 249 QPERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 78/112 (69%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
+ K RS+ N+ D+ NPDLR RV+ ++ ++L TMT EELASD+R++E EE++ + +FK
Sbjct: 204 RNKVRSLSLNIKDKNNPDLRVRVIERDIPADKLVTMTNEELASDKRKREIEELQMQNLFK 263
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ TD F+C C + Y+QMQTRSADEPMTT+VTC CN +WK
Sbjct: 264 AKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWK 315
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 139/281 (49%), Gaps = 26/281 (9%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK+LQ P+T ++L T++G ++ L+K E+V A L+ WK K++ G
Sbjct: 35 DLLKNLQELPITLEILQRTRIGMTVNSLRKSSNDEEVITLAKVLIKSWK-KLLSGTP--- 90
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
S E K+ + + S A + A ++ S +++R K R+
Sbjct: 91 --------SSKEAPAKEPEPKPSASAKQSAAAASRPNA--KQTSFPADTTNAVRLKCREL 140
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL + D + + +AA +E ++ + K + RS + N+
Sbjct: 141 LSSAL-----------KCEDMPEGCNTDSLAAKIEESIYNEFGDTNNKYKNRVRSRVSNL 189
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LR VL G + PER+A MT EE+ASD+ +Q + + + + ++ T
Sbjct: 190 KDSKNPALRINVLHGAIEPERIARMTAEEMASDDMKQLRQRLTKEAINDHQMATTGGTKT 249
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D KC C K+NC+Y+Q+QTRSADEPMTT+ C EC RWK
Sbjct: 250 DLLKCGKCRKNNCTYNQVQTRSADEPMTTFCFCNECGHRWK 290
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 135/282 (47%), Gaps = 29/282 (10%)
Query: 42 FPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKI-------VLGKETNGNK 94
+ V +L ++ G ++ L+ H ++V + A E++ WK ++ K NG+
Sbjct: 34 YQVNEAILRESKAGLAVGKLRSHAAKEVSDLAKEVVKKWKNEVERAKNGGTSSKAPNGDS 93
Query: 95 ---RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
R S +SV T + K TAK SI+ PS D+ RDK +
Sbjct: 94 AKARKASSVSVTPSTTSVTPTPVSAKGEVRTAKGD----SIKVPSTGDK----TRDKCME 145
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
+ AL+ A E+I R +A +E + + V K K RS+ N
Sbjct: 146 LIYDALA--CDSGAPSEQILGRARA---------IESAVVAQFSGPSVEYKSKIRSLFVN 194
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D+ NP LR ++ G+++ E+ M+ E+AS+ER+ + +IK FK +++
Sbjct: 195 LKDKNNPGLRESIVSGDLSVEKFGKMSSAEMASEERKAADNKIKEDNFFKSLGAAEQEAE 254
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F+C C + C Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 255 TDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCVNCGNRWK 296
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 140/271 (51%), Gaps = 22/271 (8%)
Query: 51 STQVGKSLRHL-KKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRN-------GSKLSV 102
ST++G S+ + K+ E+V + A L+ WK K++ G T+ + S+ S
Sbjct: 22 STRIGMSVNAICKQSTNEEVTSLAKSLIKSWK-KLLDGPSTDKDSDEKKKEPAISSQNSP 80
Query: 103 DEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVAS 162
+ K + +S + + + + A + + R PS +D R + L +A
Sbjct: 81 EAKEESSSSSNGSNRKEETNASDSFIPSFPRAPSTSDSVPMRCRGMLAAALRTGDDYIAI 140
Query: 163 EAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
AD+EE+ + +E ++++LR + K + RS + N+ D KNP+LR+
Sbjct: 141 -GADEEEL------------GSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRK 187
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
VL G + P+ A MT EE+ASDE ++ ++ + + + + ++ + TD F C C K
Sbjct: 188 NVLCGNIPPDLFARMTAEEMASDELKEMHKNLTKEAIREHQMAKTGGTQTDLFTCGKCKK 247
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 KNCTYTQVQTRSADEPMTTFVVCNECGNRWK 278
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A + D + + ++A+ +E ++++L+ + +
Sbjct: 184 DSVRDKCVEMLSAALK--AEDNFKDYGV-------NCDKLASEIETHIYQELKSTDMKYR 234
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++PE +A MT EE+ASDE R+ + + + +
Sbjct: 235 NRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREH 294
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD +CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 295 QMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 16/252 (6%)
Query: 67 EKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEK 126
E++ A L+ WK+ + + ++ G+ L K TS + ++ S+ K+
Sbjct: 13 EELIALAKSLIKSWKKLLDVSDGKTRDQGRGTPLPTSS--SKDTSGTTDLRLCLSSCKKP 70
Query: 127 KATASIRKP-----SHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQ 181
++ P D++R+K R+ L AL D + + D +
Sbjct: 71 DPPRTLSTPRITTFPSVPITCDAVRNKCREMLTLALQ------TDHDH---KAVGVDCEH 121
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
++A +E +F + + K + RS + N+ D KNP LRR VL G +TP+++A MT EE
Sbjct: 122 LSAQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEE 181
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ASDE ++ + + + + + ++ TD F CS C K NC+Y Q+QTRS+DEPMTT
Sbjct: 182 MASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCSKCKKKNCTYTQVQTRSSDEPMTT 241
Query: 302 YVTCAECNKRWK 313
YV C EC RWK
Sbjct: 242 YVVCNECGNRWK 253
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
A DS+R K R+ L +AL +A DD D ++ A +E +F + +
Sbjct: 13 APSTSDSVRMKCREMLSQAL-----QAGDDYIAI----GADCDELGAQIEESIFSEFQNT 63
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
K + RS + N+ D KNP+LRR VL G V P+R+A MT EE+ASDE + + + +
Sbjct: 64 DPKYKNRVRSRIANLKDIKNPNLRRNVLCGNVAPDRMAKMTAEEMASDELKLIRKNLTKE 123
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ +V + TD F C C K C+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 124 AIRDHQVSQTGGTQTDLFTCGKCKKKRCTYTQVQTRSADEPMTTFVFCMECGNRWK 179
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 133/274 (48%), Gaps = 37/274 (13%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T DL+ T++G ++ L+ H ++V + E++ WKQ +
Sbjct: 39 TEDLIRVTKIGLAVGKLRSHDNKQVSELSKEIVKKWKQDVT------------------- 79
Query: 105 KFQKQTSDSNAVKSGCSTAK--EKKATASIRKPSHADQAK--DSMRDKIRKDLEKALSRV 160
+K + + + +S + AK EK K D K D RD L A+ V
Sbjct: 80 --KKPKAAAPSAESTTTPAKPSEKPDQPRSGKTDGVDFEKLNDKTRDTCLSLLYNAM--V 135
Query: 161 ASEAADDEEITDRVKARDPKQVAASVER-VMFEKLRPMGVAEKRKHRSIMFNMSDEKNPD 219
+A E + +R A S+E V+ + G K+K RS+M N+ D+KNP
Sbjct: 136 FDSSAPSELVMER---------ALSIESTVLDDNNGSTGEEYKKKVRSLMLNLKDKKNPS 186
Query: 220 LRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSG 279
LR V+ G+ M+ ++AS+ER+Q++ ++ +FK ++ TD FKC
Sbjct: 187 LREAVISGDTPAATFCRMSSADMASEERKQQDRALELSNLFKARGAGPQQAETDSFKCGR 246
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C + C+Y+QMQTRSADEPMTT+VTC CN RWK
Sbjct: 247 CKQRKCTYYQMQTRSADEPMTTFVTCTVCNNRWK 280
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 135/289 (46%), Gaps = 33/289 (11%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST++G + LK+H V +SE++ W+ E N K
Sbjct: 30 LKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPDVARLSSEIVSKWRA------EVNKQK 83
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH-ADQAKDSM-----RDK 148
+ S S D K T + + + K + + K S ADQ S+ RD
Sbjct: 84 KTASPGSSDSP--KPTPNGTGTPASATNDKAQSSNVPPDKRSWKADQVSTSVTGVKARDS 141
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVMFEKLRP-MGVAEKRK 204
+ L ++E+ P+ V A VE F+ P + K
Sbjct: 142 CLGLMYDGLCLGSTES--------------PQAVLRKATEVEAAAFKAFGPETKEVYRSK 187
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
RS+ N+ ++ N LR RVL EVTPER MT EEL SDERR+E+ +I+ + M K V
Sbjct: 188 MRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAMV 247
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + +C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 248 GQPERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A + D + + ++A+ +E ++++L+ + +
Sbjct: 184 DSVRDKCVEMLSAALK--AEDNFKDYGV-------NCDKLASEIEDHIYQELKSTDMKYR 234
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++PE +A MT EE+ASDE R+ + + + +
Sbjct: 235 NRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREH 294
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD +CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 295 QMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A + D + + ++A+ +E ++++L+ + +
Sbjct: 184 DSVRDKCVEMLSAALK--AEDNFKDYGV-------NCDKLASEIEDHIYQELKSTDMKYR 234
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++PE +A MT EE+ASDE R+ + + + +
Sbjct: 235 NRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREH 294
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD +CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 295 QMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 143/291 (49%), Gaps = 33/291 (11%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST+VG ++ LK+H +V ASE++ W+ ++ K+ G
Sbjct: 32 LKQLQQGVKATEDLLRSTRVGIAVNKLKQHKSPEVARLASEIVSKWRHEV--NKQKAGAS 89
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI---RKPSHAD-----QAKDSMR 146
S+ S K +N SG +T +K + S+ ++ AD Q + +R
Sbjct: 90 PGASQRSSSSPHPK----TNGTPSGGATPSDKASKLSVPPDKRTWKADGVDTNQTGNRIR 145
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVMFEKLRPMGVAEKR 203
D + L + E P+ V A++VE F L P + R
Sbjct: 146 DSCIGLMYDGLCLNSVEP--------------PRTVLSKASAVEAAAFSDLGPETKEQYR 191
Query: 204 -KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
K RS+ N+ ++ NP LR RVL G+VTPE+ M+ +EL S E+++ + +I+ + M K
Sbjct: 192 TKIRSLYQNLKNKSNPTLRVRVLNGDVTPEQFVRMSHDELRSAEQQERDRKIQKENMDKA 251
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
V + ++ + +C CG+ +Y + QTRSADEPMT + TC C K WK
Sbjct: 252 MVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSWK 302
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A + D + + ++A+ +E ++++L+ + +
Sbjct: 184 DSVRDKCVEMLSAALK--AEDNFKDYGV-------NCDKLASEIEDHIYQELKSTDMKYR 234
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++PE +A MT EE+ASDE R+ + + + +
Sbjct: 235 NRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREH 294
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD +CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 295 QMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 163/330 (49%), Gaps = 60/330 (18%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQ--------KI 84
D LK L ++ ++ LL +T++G ++ ++KH K V A L+ WKQ K
Sbjct: 28 DLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNWKQLLDSPATPKG 87
Query: 85 VLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKK--------ATASIRKPS 136
G+E K+ L + ++ +TS S K K+++ AT+S ++PS
Sbjct: 88 EKGEERVKAKKKEKGLDCSD-WKPETSLSPPRKKRVEEPKDRRDSVDSKSSATSSPKRPS 146
Query: 137 ----HADQAK-----------------------------DSMRDKIRKDLEKALSRVASE 163
++ ++K DS+RDK + L AL
Sbjct: 147 MERSNSSKSKAETPRTPSSPSSPTFAPSVCLLAPCYLTGDSVRDKCVEMLSAALK----- 201
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
ADD+ V ++A+ +E ++++L+ + + + RS + N+ D +NP LRR
Sbjct: 202 -ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRN 257
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
VL G ++ +A MT EE+ASDE R+ + + + + ++ + TTD F+CS C K
Sbjct: 258 VLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKK 317
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 318 NCTYNQVQTRSADEPMTTFVLCNECGNRWK 347
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 13/193 (6%)
Query: 121 STAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPK 180
+ A++ ++ R PS +D + R+ + L VA AD+EE+
Sbjct: 54 TNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAI-GADEEEL---------- 102
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
+ +E +++++R + K + RS + N+ D KNP+LR+ VL G + P+ A MT E
Sbjct: 103 --GSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 160
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE ++ + + + + + ++ + TD F C C K NC+Y Q+QTRSADEPMT
Sbjct: 161 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 220
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 221 TFVVCNECGNRWK 233
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 13/193 (6%)
Query: 121 STAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPK 180
+ A++ ++ R PS +D + R+ + L VA AD+EE+
Sbjct: 54 TNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAI-GADEEEL---------- 102
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
+ +E +++++R + K + RS + N+ D KNP+LR+ VL G + P+ A MT E
Sbjct: 103 --GSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 160
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE ++ + + + + + ++ + TD F C C K NC+Y Q+QTRSADEPMT
Sbjct: 161 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 220
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 221 TFVVCNECGNRWK 233
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 99/152 (65%), Gaps = 8/152 (5%)
Query: 120 CSTAKEK-KATASIRKPS-HADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKAR 177
C TA+EK K S KPS + D++R K+R L ++L+RVA E + + V +R
Sbjct: 254 CVTAQEKVKGFGSFNKPSKEPVKCDDALRGKVRSILVESLTRVAKET--EAGLRRAVSSR 311
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP VAA VE VMF+K+ A+ K+RS++FN+ D KNPDLRR+VL+G++ PE+L TM
Sbjct: 312 DPICVAADVESVMFQKMGAFNGAKTVKYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTM 371
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
T EE+AS+ R+ EN +I+ K + K EKKK
Sbjct: 372 TSEEMASNHRQFENAQIRMKSLLK----EKKK 399
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 11/109 (10%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYD-LLVSTQVGKSLR 59
ME++ ++LF +AK +ADAA ++ PEV RC AL L+ FPV +L+ T V K +
Sbjct: 1 MEQQFLSLFESAKTSADAAVTSSSMIPEVHRCLAALGQLKRFPVISSRVLLFTPVAKQVE 60
Query: 60 HLKKHPCEKVQNAASELLHIWKQKI------VLGK----ETNGNKRNGS 98
L +HP + ++ AAS LL+ W++K+ + GK ++ G RNG+
Sbjct: 61 CLTRHPVKMIKTAASCLLYTWRRKLYARHPTIDGKTQLTKSGGVSRNGT 109
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 31/279 (11%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T DLL T++G ++ L+ H VQ A+EL+ W+ ++ + G K
Sbjct: 42 TEDLLRQTRIGVTINRLRTHKDPAVQRLATELVSKWRDEV----------KKGPKKGTPS 91
Query: 105 KFQKQTSDSNAVKSGCSTA-----KEKKATASIRKPSHADQAKDSM-----RDKIRKDLE 154
K ++ SG ++ K+K A ++ D+ ++ RD + +
Sbjct: 92 KIANGSASPAPPPSGTASPAPAQQKKKHDVAPDKRNHKTDKVNYNVTGHEARDGCVRLMY 151
Query: 155 KALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSD 214
L+ SEA D+ IT VA VE + + A K+K RS+ N+ +
Sbjct: 152 DGLA-FMSEALPDDIIT----------VAKHVEAAAYGNAGSVNDAYKQKMRSLFQNLKN 200
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+ NP LR+ VL G++ P++ M+ +E+ SD RR E+E+++ + M + V + +K + +
Sbjct: 201 KSNPALRKDVLSGKIQPKKFVVMSHDEMKSDSRRAEDEKLEKENMNQAMVAQVEKSISKE 260
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F+C C K SY Q QTRSADEPMTT+ C C RWK
Sbjct: 261 FQCGKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNRWK 299
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 137/289 (47%), Gaps = 33/289 (11%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST++G + LK+H V +SE++ W+ E N K
Sbjct: 30 LKELQKGIQPTEDLLRSTKIGIIVNRLKQHKSPDVARLSSEIVSKWRA------EVNKQK 83
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH----ADQAKDSM----- 145
+ S S D K T + + +A KA +S P ADQ S+
Sbjct: 84 KTASPGSSDSP--KPTPNGTGTPA---SATNDKAQSSNVPPDKRNWKADQVNTSVTGVKA 138
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-K 204
RD + L ++E++ + + + AA VE F+ P R K
Sbjct: 139 RDSCIGLMYDGLCLGSTESS--QAVLRK---------AAEVEAAAFKAFGPESKEVYRTK 187
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
RS+ N+ + N LR RVL EVTPER MT EEL SDERR+E+ +I+ + M K V
Sbjct: 188 MRSLFQNLKNTSNLSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAMV 247
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + +C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 248 GQPERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 86/133 (64%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A +E ++ ++ + + + RS + N+ D KNP+LR+ VL G VTP+ +ATMT E
Sbjct: 319 RLAWEIEECIYRDIKATDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQNIATMTAE 378
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE R+ + + + + ++ + TTD +C C K NC+Y+Q+QTRSADEPMT
Sbjct: 379 EMASDELRELRNTMTQEAIREHQMAKTGGTTTDLLQCEKCKKKNCTYNQVQTRSADEPMT 438
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 439 TFVLCNECGNRWK 451
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 136/292 (46%), Gaps = 39/292 (13%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST++G + LK+H V +SE++ W+ E N K
Sbjct: 30 LKELQKGIQPTEDLLRSTKIGIIVNRLKQHKSPDVARLSSEIVSKWRA------EVNKQK 83
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH----ADQAKDSM----- 145
+ S S D K T + + +A KA +S P ADQ S+
Sbjct: 84 KTASPGSSDSP--KPTPNGTGTPA---SATNDKAQSSNVPPDKRNWKADQVNTSVTNVKA 138
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVMFEKLRPMGVAEK 202
RD + L ++E+ P+ V A VE F+ P
Sbjct: 139 RDSCIGLMYDGLCLGSTES--------------PQAVLRKATEVEAAAFKAFGPENKEVY 184
Query: 203 R-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
R K RS+ N+ ++ N LR RVL EVTPER MT EEL SDERR+E+ +I+ + M K
Sbjct: 185 RTKMRSLFQNLKNKSNLSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDK 244
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
V + ++ + +C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 245 AMVGQPERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|405121407|gb|AFR96176.1| positive transcription elongation factor [Cryptococcus neoformans
var. grubii H99]
Length = 333
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
Query: 122 TAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQ 181
TAK S++ S + DS+RDK + AL+ ++ + T ++ + K+
Sbjct: 131 TAKSDGVADSLKADSSEGGSVDSVRDKCVVMIYDALALDSTAVERLIDATQIIEIKILKE 190
Query: 182 VAASVERVMFEKL--------RPMGVAE-KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
A +ER + + R +A+ +++ RS+ N+ D+ NP LR +++G V+ E
Sbjct: 191 RAVGIERAANKAMNFSTGNDYRANQLAKSEQEMRSLFLNLKDKGNPALRNEIVLGYVSTE 250
Query: 233 RLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQT 292
++A+M+ +E+AS+ R E+I + +FK + + TD FKC C + C+Y+QMQT
Sbjct: 251 KVASMSKDEMASESVRMLKEKIASDNLFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQT 310
Query: 293 RSADEPMTTYVTCAECNKRWK 313
RSADEPMTT+VTC CN RWK
Sbjct: 311 RSADEPMTTFVTCTNCNNRWK 331
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 154/323 (47%), Gaps = 52/323 (16%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKI-------- 84
D LK L ++ ++ LL +T++G ++ ++KH +K V A L+ WKQ +
Sbjct: 28 DLLKKLDSYQMSIQLLQTTRIGVAVNGIRKHCSDKEVVALAKILIKNWKQLLDSPGSPKG 87
Query: 85 --------------VL-----------------GKETNGNKRN--GSKLSVDEKFQKQTS 111
VL GKE NKR+ SK S+ ++
Sbjct: 88 KKGEKREKGKKKEKVLDCSDWKPEAGLSSPRRKGKEEPKNKRDSVNSKSSITSSLKRPLM 147
Query: 112 D-SNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEI 170
SN VK+ + SI S DS+RDK + L VA +A DD
Sbjct: 148 KRSNKVKTPRTPRSPLIFAPSICLLSPCYLTGDSVRDKCVEMLS-----VALKAEDDY-- 200
Query: 171 TDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVT 230
+ + ++A+ +E ++++L+ + + + RS + N+ D KNP LRR VL G ++
Sbjct: 201 --KNYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDSKNPGLRRNVLSGAIS 258
Query: 231 PERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQM 290
E +A M EE+ASDE R+ + + + + ++ + TD +C C K NC+Y+Q+
Sbjct: 259 TELIAKMMAEEMASDELRELRNAMTQEAIREHQMAKTSGTNTDLLQCGKCKKKNCTYNQV 318
Query: 291 QTRSADEPMTTYVTCAECNKRWK 313
QT SADEPMTT+V C EC RWK
Sbjct: 319 QTLSADEPMTTFVLCNECGHRWK 341
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 149/279 (53%), Gaps = 30/279 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G T+
Sbjct: 26 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTDK 84
Query: 93 NKRN-------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ S+ S + + + +S + + + + A++ ++ R PS +D S+
Sbjct: 85 DSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFPRAPSTSD----SV 140
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 141 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 187
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 247
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
++ + TD F C C K NC+Y Q+QTRSADEPMT
Sbjct: 248 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A + D + + ++A+ +E ++++L+ + +
Sbjct: 126 DSVRDKCVEMLSAALK--AEDNFKDYGV-------NCDKLASEIEDHIYQELKSTDMKYR 176
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++PE +A MT EE+ASDE R+ + + + +
Sbjct: 177 NRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREH 236
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD +CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 237 QMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 287
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 143/281 (50%), Gaps = 22/281 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK+LQ P+T ++L T++G ++ L+K E+V A L+ WK K++ G +
Sbjct: 52 DLLKNLQELPITLEILQRTRIGMTVNSLRKSSSDEEVITLAKVLIKSWK-KLLSGTPS-- 108
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
SK + ++ + + S S + +A + A ++ S +++R K R+
Sbjct: 109 -----SKEAPAKEPEPKPSASAKQQQQQQSAAASRPNA--KQTSFPADTTNAVRLKCREL 161
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL + D + +AA +E ++ + + K + RS + N+
Sbjct: 162 LSSAL-----------KCEDMPDGCNVDGLAAKIEESIYNEFGDTNMKYKNRVRSRVSNL 210
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D +NP LR VL G + PER+A M+ EE+ASDE ++ + + + ++ T
Sbjct: 211 KDSRNPALRLNVLHGAIDPERIARMSAEEMASDEMKELRQRFTKESINDHQMAVTGGTKT 270
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D KC C K+NC+Y+Q+QTRSADEPMTT+ C EC RWK
Sbjct: 271 DLLKCGKCRKNNCTYNQVQTRSADEPMTTFCYCNECGHRWK 311
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 87/136 (63%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
+P+++AA +E ++ + + + K + RS + N+ D KNP LR + G VT ++LA M
Sbjct: 176 EPEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKM 235
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
TPEE+ASDE ++ E+ + + ++ + TD KC+ C K NC+Y+Q+QTRSADE
Sbjct: 236 TPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADE 295
Query: 298 PMTTYVTCAECNKRWK 313
PMTT+V C EC RWK
Sbjct: 296 PMTTFVMCNECGNRWK 311
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 132/282 (46%), Gaps = 24/282 (8%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVD 103
+T +L ++ G ++ L+ H + V + A E++ WK ++ K+ NG + +
Sbjct: 35 ITESILRESKAGLAVGKLRSHQSKDVADLAKEIVKKWKTEVEKEKQANGGASKSAASAKP 94
Query: 104 EKFQKQTSDSN------------AVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+K ++ S + + S AK TA + D RDK +
Sbjct: 95 SAMRKASTASTTTSQTPSTPMTPTMSTSGSGAKMDHRTAK-SDGVKIEVTGDKTRDKCAE 153
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
+ AL+ A E+I R KA +E + + K K RS+ N
Sbjct: 154 LIYDALA--FDSGAPSEQILSRAKA---------IESTVLSQFNGTNAEYKAKIRSLFVN 202
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ D+ NP LR V+ G++ +R M+ +E+AS+ER+ + I + +FK E+ +
Sbjct: 203 LKDKNNPSLRESVVAGDLPVQRFCKMSSQEMASEERKAADNRIMEENLFKSLGAEEVQAE 262
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD F+C C + C Y Q QTRSADEPMTT+VTC CN RWK
Sbjct: 263 TDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWK 304
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 42/285 (14%)
Query: 36 LKHL-QAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK L Q+ T + L T+VG ++ L++H +V + A E++ WK +
Sbjct: 29 LKKLKQSVVPTEETLRDTKVGLTVGRLRQHESTEVSDLAKEIVKRWKSE----------- 77
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPS-HADQAKDSMRDKIRKDL 153
VDE+ +++ S A+ + ST+K+ S+ D D RD R +
Sbjct: 78 -------VDEEKKRKVS---ALTAAASTSKKPTGPRSVDADGVKFDSLGDKTRDSTRPLI 127
Query: 154 EKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE-----KRKHRSI 208
AL A E I R A +VE F G E + K RS+
Sbjct: 128 YNAL--CIDSGAPSELILKR---------AIAVEEAAFT---ICGKGESNSDYRNKMRSL 173
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKK 268
N+ ++NP LR+ V+ G+++ E+L TM+ ++AS+ER+Q+++ I+ + +FK ++
Sbjct: 174 FLNLKGKENPSLRQGVVSGDISAEKLVTMSSSDMASEERKQKDKAIEEENLFKSLGAGEQ 233
Query: 269 KGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F+C C + Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 234 QAETDAFQCGKCKQRKTIYRQAQTRSADEPMTTFVTCVNCGNRWK 278
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 58/300 (19%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T D++ +++G ++ ++ H +KV + A L+ WK +VD+
Sbjct: 45 TEDIIRQSKIGVAVGKMRSHSDKKVADQAKSLVKDWKA------------------TVDK 86
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDS-------------------- 144
+ +Q S +N+ K+ STA A ++ +S
Sbjct: 87 QRAQQQSSANSSKAPSSTASPAPAGTKAEGATNGSGTAESPSSSTPAAAAAKGASSNTKI 146
Query: 145 ----MRDKIRKDLEKALSRVASEAAD-----DEEITDRVKARDPKQVAASVERVMFEKLR 195
+ DK+R K L D D +I D A +VE +
Sbjct: 147 DFEILNDKVRNACLKLLYNSLEIGKDAHGWSDSQIFD---------AAVAVEAAILANQG 197
Query: 196 PMGVAE--KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEE 253
V + K RS+ N+ D+ NPDLR RV+ ++ + L TM+ EELASD+R++E E+
Sbjct: 198 KGAVTTEYRNKVRSLSLNIKDKNNPDLRARVVERDIPADTLVTMSNEELASDKRKREIEQ 257
Query: 254 IKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + +FK + ++ TD F+C C + Y+QMQTRSADEPMTT+VTC CN +WK
Sbjct: 258 LQMQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWK 317
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 156/331 (47%), Gaps = 63/331 (19%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQ---------- 82
D LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+
Sbjct: 28 DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPKG 87
Query: 83 ---------------------KIVLGKETNGNKRNGSKL---SVDEKFQKQTSD------ 112
K G KR K SVD K +S
Sbjct: 88 EKGKEREKAKKKEKGLDCSDWKPEAGLSPPRKKREDPKTRRDSVDSKSSATSSPKRPSVE 147
Query: 113 -SNAVKSGCSTAKEKKATASIRKPSHADQ---------AKDSMRDKIRKDLEKALSRVAS 162
SN+ KS A+ + +S P+ A DS+RDK + L AL
Sbjct: 148 RSNSSKS---KAESPRTPSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAALK---- 200
Query: 163 EAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
ADD+ V ++A+ +E ++++L+ + + + RS + N+ D +NP LRR
Sbjct: 201 --ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRR 255
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
VL G ++ +A MT EE+ASDE R+ + + + + ++ + TTD F+CS C K
Sbjct: 256 NVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKK 315
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 316 KNCTYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 158/330 (47%), Gaps = 62/330 (18%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+ + G
Sbjct: 28 DLLKKLDSCQMSIRLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPKG 87
Query: 93 NKR------------NGSKL---------------------SVDEKFQKQTSD------- 112
KR N S SVD K +S
Sbjct: 88 EKREERDKAKKEKGLNCSDWKPEAGLSPPRKKREDPKDRRDSVDSKSSATSSPKRPSMER 147
Query: 113 SNAVKSGCSTAKEKKATASIRKPSHADQ---------AKDSMRDKIRKDLEKALSRVASE 163
SN+ KS T K + ++ P+ A DS+RDK + L AL +
Sbjct: 148 SNSSKSKAETPKTPTSPST---PTFAPSICLLAPCYLTGDSVRDKCVEMLSAAL-----K 199
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
A DD + + ++A+ +E ++++L+ + + + RS + N+ D +NP LRR
Sbjct: 200 AEDDY----KDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRN 255
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
VL G ++ +A MT EE+ASDE R+ + + + + ++ + TTD F+CS C K
Sbjct: 256 VLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKK 315
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 316 NCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|15227992|ref|NP_181801.1| F-box protein [Arabidopsis thaliana]
gi|4512680|gb|AAD21734.1| hypothetical protein [Arabidopsis thaliana]
gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis thaliana]
Length = 737
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 133/265 (50%), Gaps = 39/265 (14%)
Query: 3 KKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTY--DLLVSTQVGKSLRH 60
++ + L+ AA +AA + S +V R DA L+ P + +++ T +GK L
Sbjct: 494 QEFLELYEAALRAAKSVKGVKNSS-KVSRFVDARNRLKDAPTSLACEVVSKTSMGKGLSF 552
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGC 120
L H +++ L +W KI+ +G + S D + Q
Sbjct: 553 LNDHKNPHIRSEGRLLRDLW-MKILYA--------SGREKSHDRETQ------------- 590
Query: 121 STAKEKKATASIRKPSHADQAK--DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARD 178
++ P+H+ K DS RDK+R+ L+ +L +VASE D E T RV A D
Sbjct: 591 -----------VKIPTHSTMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKT-RVTACD 638
Query: 179 PKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
P VA SVE MFEKL K K+RSI+FNM D NPDLRR+VLIGE+ ERL TM
Sbjct: 639 PSVVAVSVESAMFEKLGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTME 698
Query: 239 PEELASDERRQENEEIKAKFMFKCE 263
+E+ S++ ++E + IK FK E
Sbjct: 699 RQEMGSEKIQKEVQRIKENARFKEE 723
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 132/269 (49%), Gaps = 12/269 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A PVT LL ST+VG S+ L+K E+V A L+ WK+ +
Sbjct: 29 DLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLDASDAKAR 88
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+R G L K+ S++ +T I D++R K R+
Sbjct: 89 ERRRGGSLPTSS--SKEASEAQDPSRKRPELPRMPSTPRITTFPPVPVTCDAVRTKCREM 146
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + D + +A +E +F + + K + RS + N+
Sbjct: 147 LTAALQ------TDHDHV---AIGADCECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNL 197
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LRR+VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 198 KDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 257
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
D F C C K NC+Y Q+QTRS+DEPMTT
Sbjct: 258 DLFTCGKCRKKNCTYTQVQTRSSDEPMTT 286
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 156/331 (47%), Gaps = 63/331 (19%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQ---------- 82
D LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+
Sbjct: 28 DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPKG 87
Query: 83 ---------------------KIVLGKETNGNKRNGSKL---SVDEKFQKQTSD------ 112
K G KR K SVD K +S
Sbjct: 88 EKGKEREKAKKKEKGLDCSDWKPEAGLSPPRKKREDPKTRRDSVDSKSSATSSPKRPSVE 147
Query: 113 -SNAVKSGCSTAKEKKATASIRKPSHADQ---------AKDSMRDKIRKDLEKALSRVAS 162
SN+ KS A+ + +S P+ A DS+RDK + L AL
Sbjct: 148 RSNSSKS---KAESPRTPSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAALK---- 200
Query: 163 EAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
ADD+ V ++A+ +E ++++L+ + + + RS + N+ D +NP LRR
Sbjct: 201 --ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRR 255
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
VL G ++ +A MT EE+ASDE R+ + + + + ++ + TTD F+CS C K
Sbjct: 256 NVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKK 315
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 316 KNCTYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 74/112 (66%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR ++G +TP RLA MT EE+ASDE +Q E+ K + +
Sbjct: 165 KNRVRSRVANLRDVKNPNLRTNFIVGAITPARLAVMTAEEMASDEIKQLREQFKKEAIND 224
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 225 AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 276
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T DLL ST++G + LK+H V +SE++ W+ ++ K T G S+ S D
Sbjct: 40 TEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQKVTVGGSPAASQRSSDS 99
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
KQT + A + A + S P D + I K+
Sbjct: 100 P--KQTPNGTASPASTGAAASDRLAKSTVPPDKRSWKTDQL--TITHTQNKSRDSCIGLI 155
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRR 223
D + R Q A VE + P + R K RS+ N+ ++ NPDLR R
Sbjct: 156 YDGLCLHSTEPPRVVLQKAIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVR 215
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
VL E+TP++ MT +EL SD +R+E I + M K V + ++ + +C CG+
Sbjct: 216 VLSNEITPDKFVRMTHDELKSDAQREEERRIHKENMDKAMVAKAERSISTSLQCGKCGQK 275
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+Y + QTRSADEPMT + TC C K W+
Sbjct: 276 KVTYTEAQTRSADEPMTLFCTCVVCGKSWR 305
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL ADD+ V ++A+ +E ++++L+ + +
Sbjct: 185 DSVRDKCVEMLSAALK------ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYR 235
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 236 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 295
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 296 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 25/302 (8%)
Query: 23 NRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWK 81
N V++C L L P++ +++ T +G + ++K + V A ++ WK
Sbjct: 19 NNGMESVEQCNKLLDQLSKIPMSIEIIQKTNIGIKVNMMRKKVTDDAVAKRAKNIIKDWK 78
Query: 82 QKIVLGKETNGNKRNGS------KLSVDE-KFQKQTSDSNAVKSGCSTAKE---KKATAS 131
+V GK + + K SV+E K +K+ ++ + S+ E + A+AS
Sbjct: 79 N-VVDGKSKSQDDGGAPPAKKHRKESVEEAKPEKKKIEAPYKRPEPSSRPEIVAQFASAS 137
Query: 132 IRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMF 191
P H + D R K + L AL D + T DP+++A +E ++
Sbjct: 138 F-PPKHLEN--DETRLKSAQLLLSAL-----RFGDMPQGT-----LDPEELAVQIEEKLY 184
Query: 192 EKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQEN 251
R + RS +FN+ D+KN LR VL G V E+ ATMT EE+AS E R+
Sbjct: 185 SVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASAEIREMR 244
Query: 252 EEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKR 311
++ + + + ++ ++ +D FKC CGK NC+Y Q+QTRS+DEPMTT+V C EC R
Sbjct: 245 DKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNR 304
Query: 312 WK 313
WK
Sbjct: 305 WK 306
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL ADD+ V ++A+ +E ++++L+ + +
Sbjct: 157 DSVRDKCVEMLSAALK------ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYR 207
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 208 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 267
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 268 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 318
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL ADD+ V ++A+ +E ++++L+ + +
Sbjct: 185 DSVRDKCVEMLSAALK------ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYR 235
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 236 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 295
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 296 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 86/136 (63%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
+P+++AA +E ++ + + + K + RS + N+ D KNP LR + G V+ ++LA M
Sbjct: 186 EPEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKM 245
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
TPEE+ASDE ++ E+ + + ++ + TD KC C K NC+Y+Q+QTRSADE
Sbjct: 246 TPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADE 305
Query: 298 PMTTYVTCAECNKRWK 313
PMTT+V C EC RWK
Sbjct: 306 PMTTFVMCNECGNRWK 321
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 124 KEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVA 183
++ K A R P A D++R K R+ L AL +V E + + P+++
Sbjct: 110 RDDKKRARSRSPQRASNTTDTVRLKCREMLAHAL-QVEGEQPEG--------CQPPEELG 160
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+E +F +++ K + RS + N+ D KNP LR + G +T ERLA MTPEE+A
Sbjct: 161 EELEEAIFAEIKNTDFRYKNRVRSRVANLKDPKNPSLRANFVSGAITAERLAKMTPEEMA 220
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYV 303
SDE + + + + ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V
Sbjct: 221 SDEMKNLRDRFVKEAINDAQLATNQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFV 280
Query: 304 TCAECNKRWK 313
C EC RWK
Sbjct: 281 LCNECGNRWK 290
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + VAS D++ + + +++A +E ++ +++ + +
Sbjct: 126 DSVRDK-------CVEMVASALKTDDDY--KQFGTNCERLAWEIEECIYSEVKVTDMKYR 176
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP+LR+ VL G VTP+ +ATMT EE+ASDE R+ + + + +
Sbjct: 177 NRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREH 236
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD +C C K NCSY+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 237 QMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNECGNRWK 287
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL ADD+ V ++A+ +E ++++L+ + +
Sbjct: 164 DSVRDKCVEMLSAALK------ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYR 214
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 215 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 274
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 275 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 325
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 21/294 (7%)
Query: 24 RSEPEVQRCADALKHLQA-FPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQ 82
+S + Q D L L+ F +T +L ++ G ++ L+ H + V + A E++ WK
Sbjct: 16 QSAADEQEIIDVLNILKKDFEITESILRESKAGLAVGKLRTHAAKHVADLAKEIVKKWKV 75
Query: 83 KIVLGKETNGNK---RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHAD 139
+ K + +K +NG + +++ S ++ + + K + +
Sbjct: 76 AVEKAKGAHHSKAPQQNG------KGPERKASVASTPGTPSTPTTAKVELRTAKGDGVKG 129
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
DS RDK + + AL+ + A E I KA +E + +
Sbjct: 130 NTGDSTRDKCTELIYDALA--SDSGAPVELILKHAKA---------IEASVLADCDGVTA 178
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K K RS+ N+ D+ NP LR ++ GE+ E+ MT +E+AS+ER+ + +I+A+
Sbjct: 179 AYKSKIRSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQEMASEERKAADNKIRAENF 238
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+++ TD F+CS C + C Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 239 HNSLAAAEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMTTFVTCTNCGNRWK 292
>gi|322694712|gb|EFY86534.1| transcription elongation factor s-ii [Metarhizium acridum CQMa 102]
Length = 303
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 145/277 (52%), Gaps = 26/277 (9%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T ++L +T+ G + L+ +P +++ +A+EL+ WK+ L ++ ++ K+
Sbjct: 40 TEEMLRATKAGVFVAKLRANPNKEIARSAAELVIKWKK---LVEQEKASRAQRPKMGS-- 94
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKA-TASIRKPSH-AD-----QAKDSMRDKIRKDLEKAL 157
S+ V CS A K+A T K S AD + +RD+ + L
Sbjct: 95 --PAAAPASSPVPQACSAAGAKRAFTGDPEKRSFTADGVELKRTSSGVRDRCIGLIYNGL 152
Query: 158 SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRP-MGVAEKRKHRSIMFNMSDEK 216
+ ++E++DD V AR A +VE +F + + G K+K RS+ N+ +
Sbjct: 153 AYRSTESSDD------VIAR-----AVAVEHAVFVEFKEDEGEGYKKKIRSLFANLKTKS 201
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
N DL +RV+ G++ PE+ A MT EEL S+++R++ E++ + M + +VP +K +D +
Sbjct: 202 NKDLGKRVMSGDILPEKFAKMTDEELKSEDQRKKEIELEKENMKRAQVPMAEKSISDSLE 261
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CS C SY Q QTRSADEPMTT+ C C RWK
Sbjct: 262 CSRCKMKKVSYTQAQTRSADEPMTTFCECMNCGHRWK 298
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D KNP+LR L+G +TP RLA MT EE+ASDE +Q E+ K + + ++
Sbjct: 4 RSRVANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLA 63
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 64 TVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 111
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 86/133 (64%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A +E ++ +++ + + + RS + N+ D KNP+LR+ VL G VTP+ +ATMT E
Sbjct: 511 RLAWEIEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE 570
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE R+ + + + + ++ + TD +C C K NCSY+Q+QTRSADEPMT
Sbjct: 571 EMASDELRELRNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMT 630
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 631 TFVLCNECGNRWK 643
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 86/133 (64%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A +E ++ +++ + + + RS + N+ D KNP+LR+ VL G VTP+ +ATMT E
Sbjct: 511 RLAWEIEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE 570
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE R+ + + + + ++ + TD +C C K NCSY+Q+QTRSADEPMT
Sbjct: 571 EMASDELRELRNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMT 630
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 631 TFVLCNECGNRWK 643
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 86/133 (64%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A +E ++ +++ + + + RS + N+ D KNP+LR+ VL G VTP+ +ATMT E
Sbjct: 511 RLAWEIEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE 570
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE R+ + + + + ++ + TD +C C K NCSY+Q+QTRSADEPMT
Sbjct: 571 EMASDELRELRNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMT 630
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 631 TFVLCNECGNRWK 643
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 156/326 (47%), Gaps = 57/326 (17%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKI---VLGKETN 91
LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+ + K
Sbjct: 30 LKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPKGEK 89
Query: 92 GNKRNGSKL-------------------------------SVDEKFQKQTSDSNAV---- 116
G +R+ +K SVD K +S
Sbjct: 90 GEERDKAKKEKGLDCSNWKPETGLSPPRKKRAEEPKERRDSVDSKSSATSSPKRPSMERS 149
Query: 117 KSGCSTAKEKKATASIRKPSHADQA---------KDSMRDKIRKDLEKALSRVASEAADD 167
SG S A+ K S P+ A DS+RDK + L AL +A DD
Sbjct: 150 NSGKSKAETPKTPTSPSTPTFAPSVCLLAPCYLTGDSVRDKCVEMLSAAL-----KAEDD 204
Query: 168 EEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIG 227
+ + ++A+ +E ++++L+ + + + RS + N+ D +NP LRR VL G
Sbjct: 205 Y----KDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSG 260
Query: 228 EVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSY 287
++ +A MT EE+ASDE R+ + + + + ++ + TTD F+CS C K NC+Y
Sbjct: 261 AISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTY 320
Query: 288 HQMQTRSADEPMTTYVTCAECNKRWK 313
+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 321 NQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 158/332 (47%), Gaps = 64/332 (19%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKI---VLGKE 89
D LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+ + L K
Sbjct: 28 DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGLPKG 87
Query: 90 TNGNKRNGSKL--------------------------------SVDEKFQKQTSD----- 112
G +R +K S D K +S
Sbjct: 88 EKGEEREKAKKNEKGHDCSDWKPETGLSPPRKKRGEEPKDRRDSTDSKSSATSSPKRPSM 147
Query: 113 --SNAVKSGCSTAKEKKATASIRKPSHADQ---------AKDSMRDKIRKDLEKALSRVA 161
SN+ KS A+ K +S P+ A DS+RDK + L AL
Sbjct: 148 ERSNSSKS---KAEAPKTPSSPLTPTFAPSMCLLAPCYLTGDSVRDKCVEMLSAALK--- 201
Query: 162 SEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLR 221
ADD+ V ++A+ +E ++++L+ + + + RS + N+ D +NP LR
Sbjct: 202 ---ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLR 255
Query: 222 RRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCG 281
R VL G ++ +A MT EE+ASDE ++ + + + + ++ + TTD F+CS C
Sbjct: 256 RNVLSGAISAGLIAKMTAEEMASDELKELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCK 315
Query: 282 KSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 316 KKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 347
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 85/136 (62%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
+P+++A +E ++ + R + K + RS + N+ D KNP LR + G +T ++LA M
Sbjct: 189 EPEEMAIELEEAIYAEFRNTDMKYKNRVRSRVANLKDPKNPTLRGNFMCGAITAQQLAKM 248
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
TPEE+ASDE ++ E+ + + ++ + TD KC C K NC+Y+Q+QTRS+DE
Sbjct: 249 TPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSSDE 308
Query: 298 PMTTYVTCAECNKRWK 313
PMTT+V C EC RWK
Sbjct: 309 PMTTFVMCNECGHRWK 324
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL ADD+ + ++A+ +E ++++L+ + +
Sbjct: 225 DSVRDKCVEMLSAALK------ADDDYKDYGINC---DKMASEIEDHIYQELKSTDMKYR 275
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 276 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 335
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 336 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 386
>gi|190345115|gb|EDK36938.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
Query: 182 VAASVERVMF-EKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
VA ++E +F ++ + A + K R++ N+ ++KNPDLR R+L G++ P + TM P
Sbjct: 79 VARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPN 138
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+A + +QE E++ + +F + +K+ TD+F C C SY+QMQTRSADEP+T
Sbjct: 139 EMAPESLKQEIEKLNKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLT 198
Query: 301 TYVTCAECNKRWK 313
T+ TC C RWK
Sbjct: 199 TFCTCENCGNRWK 211
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 101/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D++R K R+ L +L D++ + D +++AA +E +++ ++ + K
Sbjct: 42 DTVRSKCREMLTSSLQ------TDNDYV---AIGADCEEMAAQIEEFIYQDVKNTDLKYK 92
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNPDLR+ VL G +TPE +A MT EE+AS+E ++ + + + + +
Sbjct: 93 NRVRSHISNLKDSKNPDLRKNVLCGVITPEEIAVMTSEEMASNELKEIWKAMTKEAIREH 152
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC WK
Sbjct: 153 QMAKTGGTQTDLFTCRKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNHWK 203
>gi|146423462|ref|XP_001487659.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
Query: 182 VAASVERVMF-EKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
VA ++E +F ++ + A + K R++ N+ ++KNPDLR R+L G++ P + TM P
Sbjct: 79 VARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPN 138
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+A + +QE E++ + +F + +K+ TD+F C C SY+QMQTRSADEP+T
Sbjct: 139 EMAPESLKQEIEKLNKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLT 198
Query: 301 TYVTCAECNKRWK 313
T+ TC C RWK
Sbjct: 199 TFCTCENCGNRWK 211
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A + D + + ++A+ +E ++++L+ + +
Sbjct: 129 DSVRDKCVEMLSAALK--AEDNFKDYGV-------NCDKLASEIEDHIYQELKSTDMKYR 179
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++PE +A MT EE+ASDE R+ + + + +
Sbjct: 180 NRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREH 239
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD +CS C K NC+Y+Q+QTRSAD PMTT+V C EC RWK
Sbjct: 240 QMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADAPMTTFVLCNECGNRWK 290
>gi|169780530|ref|XP_001824729.1| transcription elongation factor S-II [Aspergillus oryzae RIB40]
gi|238505302|ref|XP_002383880.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|83773469|dbj|BAE63596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689994|gb|EED46344.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|391872022|gb|EIT81165.1| transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein [Aspergillus oryzae 3.042]
Length = 304
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 145/314 (46%), Gaps = 35/314 (11%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA A ++EP LK LQ T DLL ST+VG + K+H +V
Sbjct: 11 KAKALTKAATQNEPAAN-IVSLLKELQQGVKATEDLLRSTRVGIIVNKFKQHKSPEVSRL 69
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKAT--- 129
+SE++ W+ E N K +GS N S T KA+
Sbjct: 70 SSEIVSRWRN------EVNKQKASGSPAPSQRSSNSPRPAQNGTASPAGTTPTDKASKLS 123
Query: 130 -ASIRKPSHAD-----QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV- 182
A ++ AD Q + +RD + L ++EA P+ V
Sbjct: 124 VAPDKRTWKADGVDINQTGNKIRDSCIGLMYDGLCLNSTEA--------------PRNVL 169
Query: 183 --AASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
A++VE ++ L P + R K RS+ N+ ++ NP LR RVL +VTP++ M+
Sbjct: 170 SKASAVEAAAYKSLGPETKEQYRTKIRSLFQNLKNKSNPSLRIRVLSNDVTPDQFVRMSH 229
Query: 240 EELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPM 299
+EL SDE+R+++ +I+ + M K V + ++ + +C CG+ +Y + QTRSADEPM
Sbjct: 230 DELRSDEQREKDAKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPM 289
Query: 300 TTYVTCAECNKRWK 313
T + TC C K WK
Sbjct: 290 TLFCTCLNCGKSWK 303
>gi|406865033|gb|EKD18076.1| transcription elongation factor S-II [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 301
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 133/286 (46%), Gaps = 43/286 (15%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T +LL +T+ G + K +P + V ASE++ WKQ + G+ +
Sbjct: 40 TEELLRNTKAGIIISKQKTNPNKDVAKLASEIVQKWKQIVQSGQS-------------KK 86
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI---RKDLEKA-LSRV 160
K S+ A+ S K A +S P+H + AK S + I R + EK + R
Sbjct: 87 KISSTPSNIPAISS-----PPKNAASS---PAHPNDAKGSFKGDITKRRWETEKVDVKRT 138
Query: 161 ASEAAD-------------DEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRS 207
+ + D E + + R A VE+ F+ + + K RS
Sbjct: 139 GTPSRDACIGLLYNGLAFMSTEPSSTIMVR-----AIEVEKAAFDAFKGDTPEYRSKLRS 193
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
+ N+ N +L V+ GE+ PE+ M+ EEL S ERR+E+E+++ M K +VP
Sbjct: 194 LFQNLKAISNRELAPAVMSGEIPPEKFVVMSHEELKSSERRKEDEKLQKDNMKKAQVPMA 253
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K +D KC CG+ SY Q QTRSADEPMTT+ C C RWK
Sbjct: 254 EKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK 299
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 145/307 (47%), Gaps = 20/307 (6%)
Query: 12 AKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQN 71
AK++ ++A N V+ C D L +L VT +LL T +GK + L+ H ++
Sbjct: 11 AKQSLNSALENNN----VETCLDILDNLSKIKVTGELLKKTDIGKVIGKLRTHKDNQLSI 66
Query: 72 AASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATAS 131
A ++ WK +V ++T+ + + S + + S S A K S
Sbjct: 67 KAKAVVKKWKDDVV--RQTSNSPQTKKAPSPSPSIETSSVASTEASKASSQASSPKTPGS 124
Query: 132 --IRKPSHADQAKDSMRDKI--RKDLEKALSRVA-SEAADDEEITDRVKARDPKQVAASV 186
+ + D+ + K +E S V + AD E + R A ++
Sbjct: 125 EGVSRTVKTDEVTYKSTGNVPRNKTIELMYSAVGLNSGADSELLLKR---------ALAI 175
Query: 187 ERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
E +F++ + K K R++ N+ + NP LR V+ GE+T E+L TM+ EE+AS+E
Sbjct: 176 ETRIFDEYGSVNEGYKSKVRTLANNLKSKSNPGLRESVVSGELTIEKLCTMSVEEMASEE 235
Query: 247 RRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCA 306
+ + ++ + +FK + TD FKC C C+Y QMQTRSADEPMTT+VTC
Sbjct: 236 AQARDRKLAEEALFKARGATSAQAETDMFKCGKCQGRKCTYFQMQTRSADEPMTTFVTCV 295
Query: 307 ECNKRWK 313
C WK
Sbjct: 296 NCGNHWK 302
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 153/306 (50%), Gaps = 50/306 (16%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWK------QKIVLG 87
+ L+ L+ VTY +L T++G ++ L+KH EK+ + A L+ WK + +V
Sbjct: 27 EVLRGLEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMALSPRPLVSD 86
Query: 88 KETNGNKR-NGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMR 146
E + N +K V K TS SN +K+ A + ++A P+ D+ + ++R
Sbjct: 87 PERKASSSGNSNKTEVSSKV---TSGSNGLKTAPKPAGARPSSAPF-IPAGLDKVRATVR 142
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK-- 204
K+++ LE ASE + P +VAA++E V ++ MG ++K
Sbjct: 143 TKLKEILE------ASEGGN------------PGEVAAAIE-VAMARIYHMGAPGEQKKD 183
Query: 205 ----HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK----- 255
+R + FN+ +KN DLR+ +L V+ ++L M+ EELA++E+R + E+++
Sbjct: 184 YMAKYRQLSFNL--KKNGDLRQNLLDDSVSGDQLIKMSAEELATEEKRAQIEKLRDDAFQ 241
Query: 256 -AKFMF------KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAEC 308
A+ + K + +GT F C C S S Q QTRSADEPMT +V C C
Sbjct: 242 EARLDWAEANHEKIQKQTGTEGTKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNC 301
Query: 309 NKRWKC 314
RWKC
Sbjct: 302 GNRWKC 307
>gi|116180542|ref|XP_001220120.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
gi|88185196|gb|EAQ92664.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 19/277 (6%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T + L ST+ G ++ L+ + +++ ASE++ W++ + KE+ K SKL
Sbjct: 40 TEEQLRSTKAGVAVGKLRHNANKEIARLASEIVSKWRKNVDAAKESKKRKLEQSKLE--- 96
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMR-DKIRKDLEKALSRVASE 163
Q ++ S + S + S P D K R DK+ +SR ++
Sbjct: 97 --QSKSEQSKSPTSPTPKDSPAPPSTSYSTPYEGDPEKRHFRVDKV------DISRTGNK 148
Query: 164 AADDE--EITDRVKARDPKQVAASVERVM-FEKLRPMGVAEKRKHRS----IMFNMSDEK 216
D + + + R + + ++R M E + ++R+ +M ++ +
Sbjct: 149 TRDGSIGVLYNGLAYRATESIEEVLQRTMEVEAAAYAAYGDTNEYRAKIRGLMTSLKRKD 208
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
NP+L RRVL G++ PE+ A MT EELASD +R+ + ++ + M K +VP ++ +D +
Sbjct: 209 NPELGRRVLRGDIAPEKFAVMTDEELASDAQRERDAALERENMLKAQVPMAQRSISDSLQ 268
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C + SY Q QTRSADEPMTT+ C C RWK
Sbjct: 269 CGKCKQKKVSYSQAQTRSADEPMTTFCECTVCGHRWK 305
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 85/133 (63%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A+ +E +F++L+ + + + RS + N+ D KNP LRR VL G + P +A MT E
Sbjct: 245 KMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPALRRNVLCGAIEPSLIARMTAE 304
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE ++ + + + + ++ + TD F+C C K NC+Y+Q+QTRSADEPMT
Sbjct: 305 EMASDELKKLRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMT 364
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 365 TFVLCNECGNRWK 377
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 82/136 (60%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP+++A +E ++ R RS +FN+ D+KN LR VL G V E+ ATM
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
T EE+AS E R ++ + + + ++ ++ +D FKC CGK NC+Y Q+QTRS+DE
Sbjct: 231 TSEEMASPEIRNMRDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDE 290
Query: 298 PMTTYVTCAECNKRWK 313
PMTT+V C EC RWK
Sbjct: 291 PMTTFVFCLECGNRWK 306
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T DLL ST++G + LK+H V +SE++ W+ ++ K T G S+ S D
Sbjct: 40 TEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQKVTVGGSPAASQRSSDS 99
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
K+T + A + A + S P D + I K+
Sbjct: 100 P--KRTPNGTASPASTGAAASDRLAKSTVPPDKRSWKTDQL--TITHTQNKSRDSCIGLI 155
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRR 223
D + R Q A VE + P + R K RS+ N+ ++ NPDLR R
Sbjct: 156 YDGLCLHSTEPPRVVLQKAIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVR 215
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
VL E+TP++ MT +EL SD +R+E I + M K V + ++ + +C CG+
Sbjct: 216 VLSNEITPDKFVRMTHDELKSDAQREEERRIHKENMDKAMVAKAERSISTSLQCGKCGQK 275
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+Y + QTRSADEPMT + TC C K W+
Sbjct: 276 KVTYTEAQTRSADEPMTLFCTCVVCGKSWR 305
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 84/132 (63%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+ A +E ++++++ + K + RS + N+ D KNP LRR VL G + R+A+M+ EE
Sbjct: 387 MGAEIEDYIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEE 446
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ASDE +Q + + + + ++ + TTD +C C K NC+Y+Q+QTRSADEPMTT
Sbjct: 447 MASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCNKKNCTYNQVQTRSADEPMTT 506
Query: 302 YVTCAECNKRWK 313
+V C EC RWK
Sbjct: 507 FVLCNECGYRWK 518
>gi|367020002|ref|XP_003659286.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
gi|347006553|gb|AEO54041.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
Length = 309
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 15/286 (5%)
Query: 36 LKHLQAFPV-TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
L+ L++ P T + L ST+ G + L+ +P + + ASE++ W++ + KE K
Sbjct: 29 LEELKSVPAPTEEQLRSTKAGVLVGRLRHNPNKDIARLASEIVSKWRKSVDAAKEAKKRK 88
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLE 154
SKL Q + S + S T+K+ A A PS++ + + K
Sbjct: 89 LEQSKLE-----QSKLEQSKSPTSKSPTSKDSPAPAP--SPSYSTPYEGDPEKRHFKTDN 141
Query: 155 KALSRVASEAADDE--EITDRVKARDPKQVAASVERVMFEKLRPMGVAE-----KRKHRS 207
+SR ++A D + + + R + + ++ M + V + + K R
Sbjct: 142 VDISRTGNKARDGSIGVLYNGLAYRRTESIEEVLQHAMAIEAAAFAVYKDTPEYRNKIRG 201
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
+M ++ + N +L RRVL GE+ P++ MT EELASD +R+ + ++ + M K +VP
Sbjct: 202 LMTSLKRKDNAELGRRVLDGEIPPDKFVVMTDEELASDAQRERDRALERENMLKAQVPMA 261
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K + +C CGK SY Q QTRSADEPMTT+ C C RWK
Sbjct: 262 QKSISVDLQCGKCGKKKVSYSQAQTRSADEPMTTFCECTVCGHRWK 307
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A+D+ V ++A+ +E ++++L+ + +
Sbjct: 329 DSVRDKCVEMLSAALK------AEDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYR 379
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 380 NRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 439
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 440 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 490
>gi|258575459|ref|XP_002541911.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
gi|237902177|gb|EEP76578.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
Length = 303
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 30/305 (9%)
Query: 21 ATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHI 79
ATN +EP + LK LQ T DLL +T++G ++ LK H V AS+++H
Sbjct: 16 ATNSAEPPSTLIS-ILKDLQNGVRPTEDLLRATKIGITVNRLKTHKHPDVARLASDIVHK 74
Query: 80 WKQKIVLGKETNGNKRNGSKLSVDEKFQ--KQTSDSNAVKSGCSTAKEKKATASI---RK 134
W+ E N K +GS + KQT + A + + +K + +++ ++
Sbjct: 75 WRH------EVNKQKTSGSPTTSQRSSDSPKQTPNGAATPTPGAEGSDKMSKSTVPPDKR 128
Query: 135 PSHADQ-----AKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
ADQ K+ RD L L ++E+ R Q + VE
Sbjct: 129 SWKADQLTMDHTKNKTRDSCIGLLYDGLCLSSTESP-----------RTVLQKSIEVEAA 177
Query: 190 MFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERR 248
+ P + R K RS+ N+ ++ N LR RVL E+T ++ MT +EL SDERR
Sbjct: 178 AYNAFGPETKDQYRTKIRSLYQNLKNKSNLSLRMRVLSNEITSDKFVRMTHDELKSDERR 237
Query: 249 QENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAEC 308
+E+ +I+ + M K V + ++ + +C CG+ +Y + QTRSADEPMT + TC C
Sbjct: 238 EEDLKIQKENMDKAMVAKAERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLAC 297
Query: 309 NKRWK 313
K W+
Sbjct: 298 GKSWR 302
>gi|71000299|ref|XP_754844.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|66852481|gb|EAL92806.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|159127856|gb|EDP52971.1| transcription elongation factor S-II [Aspergillus fumigatus A1163]
Length = 304
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 153/316 (48%), Gaps = 39/316 (12%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQA-FPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA A ++EP LK LQ+ T DLL ST+VG + K+H +V
Sbjct: 11 KAKALTKAATQNEPAAN-IVSLLKELQSGVKATEDLLRSTRVGIIVNKFKQHKSPEVARL 69
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQ---KQTSDSNAVKSGCSTAKEKKAT 129
+SE++ W+ E N +K +GS SV ++ + + A +G +T +K +
Sbjct: 70 SSEIVSKWRN------EVNKHKASGSP-SVSQRSSGSPRPAQNGTASPAG-TTPSDKLSK 121
Query: 130 ASI---RKPSHAD-----QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQ 181
S+ ++ AD Q + +RD + L ++E+ P+
Sbjct: 122 LSVPPDKRTWKADGVDINQTSNKIRDSCIGLMYDGLCLNSTES--------------PRA 167
Query: 182 V---AASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
V A++VE F L P + R K RS+ N+ ++ NP LR RVL EVTPE+ M
Sbjct: 168 VLSKASAVEAAAFNALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKM 227
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
+ +EL SDE+R++ I+ + M K V + ++ + +C CG+ +Y + QTRSADE
Sbjct: 228 SHDELKSDEQREQERRIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADE 287
Query: 298 PMTTYVTCAECNKRWK 313
PMT + TC C K W+
Sbjct: 288 PMTLFCTCMNCGKSWR 303
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL +A DD + + ++A+ +E ++++L+ + +
Sbjct: 162 DSVRDKCVEMLSAAL-----KAEDDY----KDYGVNCDKMASEIEDHIYQELKSTDMKYR 212
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 213 NRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 272
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 273 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 323
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 9/174 (5%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q DS+RDK + L AL D++ D + + + A +E ++++ + +
Sbjct: 243 QTGDSIRDKCIEMLTAALR-------TDDDYKDY--GTNCEAMGAEIEDYIYQETKATDM 293
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
K + RS + N+ D KNP+LR+ VL G + R+A+MT EE+ASDE +Q + + +
Sbjct: 294 KYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDELKQLRNVLTQEAI 353
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TTD +C C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 354 REHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 407
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 132/281 (46%), Gaps = 37/281 (13%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T D+L T++G S+ +L+K E+V + A L+ WK+ + NG
Sbjct: 6 DILKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLL----NQNG 61
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+ S + + + + S+ ++S + DS+R+K R+
Sbjct: 62 APKRSDSTSSEPSEKSPPEGTKLQRQDSSSTAGSSFSSSQDSFPAVTKTHDSVREKCREM 121
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL TD K + K K + RS + N+
Sbjct: 122 LANALK------------TDEFKNTEMKY--------------------KTRVRSRIANL 149
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LR +VL G+V+ E++A MT EE+AS E ++ + + + + ++ T
Sbjct: 150 KDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKEAIRDAQMATTGGTQT 209
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D KC C K N +Y+Q+QTRSADEPMTT+ C EC RWK
Sbjct: 210 DLLKCGKCKKRNVTYNQVQTRSADEPMTTFCYCNECGNRWK 250
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 132/281 (46%), Gaps = 37/281 (13%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
D LK L+ P+T D+L T++G S+ +L+K E+V + A L+ WK+ + NG
Sbjct: 255 DILKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLL----NQNG 310
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+ S + + + + S+ ++S + DS+R+K R+
Sbjct: 311 APKRSDSTSSEPSEKSPPEGTKLQRQDSSSTAGSSFSSSQDSFPAVTKTHDSVREKCREM 370
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL TD K + K K + RS + N+
Sbjct: 371 LANALK------------TDEFKNTEMKY--------------------KTRVRSRIANL 398
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LR +VL G+V+ E++A MT EE+AS E ++ + + + + ++ T
Sbjct: 399 KDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKEAIRDAQMATTGGTQT 458
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D KC C K N +Y+Q+QTRSADEPMTT+ C EC RWK
Sbjct: 459 DLLKCGKCKKRNVTYNQVQTRSADEPMTTFCYCNECGNRWK 499
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL +A DD + + ++A+ +E ++++L+ + +
Sbjct: 190 DSVRDKCVEMLAAAL-----KAEDDY----KDYGVNCDKMASEIEDHIYQELKSTDMKYR 240
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 241 NRVRSRISNLKDPRNPGLRRNVLSGAISSGLIAKMTAEEMASDELRELRNAMTQEAIREH 300
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD +CS C K NC+Y+QMQTRSADEPMTT+V C EC RWK
Sbjct: 301 QMAKTGGTTTDLLQCSKCKKKNCTYNQMQTRSADEPMTTFVLCNECGHRWK 351
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A+D+ V ++A+ +E ++++L+ + +
Sbjct: 390 DSVRDKCVEMLSAALK------AEDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYR 440
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 441 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 500
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 501 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 551
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 155/334 (46%), Gaps = 30/334 (8%)
Query: 3 KKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
K ++ K++ + SE L+ L++ + ++L T++G + +K
Sbjct: 5 KDIILEIKLMKESLERLILNKESESTYDEVMKILEKLESVCINREILKQTKIGVVMTAVK 64
Query: 63 KHPCE----KVQNAASELLHIWKQKIVLGKE---TNGNKRNGSKLSVDEKFQKQTSDS-- 113
K C + A EL+ WK + + N K N +S K KQ++++
Sbjct: 65 KGFCTVNNIAIVTKADELIRKWKDSLATNTQQAPNNNEKLNDQNVSSTAKKLKQSAENKT 124
Query: 114 -------NAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAAD 166
N VK+ T +E K + K D MRDK R L KA+ V
Sbjct: 125 KDIQESQNQVKN--ETKEEIKEEEILHKEYTGPLTGDVMRDKARHFLWKAM--VTGVPYS 180
Query: 167 DEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH----RSIMFNMSDEKNPDLRR 222
++ +K ++AA +E V+ + G R + ++I +N+SD KNP+L
Sbjct: 181 QAKL---MKESQVCEIAAEIESVLHREYIVKGDNSVRDYNLQLKTIKWNLSDLKNPELNS 237
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTD---QFKCSG 279
++ +G++TPE +A M E+ASD +++E E+ K + + C+ + QF C
Sbjct: 238 KLYVGKITPEEIARMQSREMASDAKQKEREKHKQESLEACQSDWDLRNLIQKEGQFTCGK 297
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C + +Y+QMQTRSADEPMTT+V C C RWK
Sbjct: 298 CKTNKTTYYQMQTRSADEPMTTFVRCLNCGNRWK 331
>gi|322712025|gb|EFZ03598.1| transcription elongation factor S-II [Metarhizium anisopliae ARSEF
23]
Length = 300
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 144/276 (52%), Gaps = 24/276 (8%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T ++L +T+ G + L+ +P +++ +A+EL+ WK+ L ++ ++ K+
Sbjct: 40 TEEMLRATKAGVFVAKLRANPNKEIARSAAELVIKWKK---LVEQEKASRAQRPKMGSP- 95
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH-AD-----QAKDSMRDKIRKDLEKALS 158
+ S ++G +T +K T K S AD + +RD+ + L+
Sbjct: 96 --AAAPASSPVPQAGSATGAKKAFTGDPEKRSFTADGVELKRTSSGVRDRCIGLIYNGLA 153
Query: 159 RVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRP-MGVAEKRKHRSIMFNMSDEKN 217
++E+ DD V AR A +VE +F + + G K+K RS+ N+ + N
Sbjct: 154 YRSTESPDD------VIAR-----AVAVEHAVFIEFKEDEGEGYKKKIRSLFANLKTKSN 202
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKC 277
DL +RV+ G+++PE+ A MT EEL S+++R++ E++ + M + +VP +K +D +C
Sbjct: 203 KDLGKRVMSGDISPEKFAKMTDEELKSEDQRKKEIELEKENMKRAQVPMAEKSISDSLEC 262
Query: 278 SGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C SY Q QTRSADEPMTT+ C C RWK
Sbjct: 263 GRCKMKKVSYTQAQTRSADEPMTTFCECMNCGHRWK 298
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 150/325 (46%), Gaps = 37/325 (11%)
Query: 1 MEKKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
M+ K + L G KA A A N + + LK T DLL ST++G ++
Sbjct: 3 MDAKEIELRG---KAIGKAVAENEPSANILNLLNGLK--TGVDATEDLLRSTRIGVTINR 57
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGC 120
L+ H VQ A+EL+ W+ ++ K+ K + + + ++
Sbjct: 58 LRTHKDPAVQRLATELVSKWRDQV---------KKQPKKGTPAKTAANSGASASPAPPPS 108
Query: 121 STAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVA------------SEAADDE 168
TA A A + AD+ ++ DK++ + SR A SEA DE
Sbjct: 109 GTASPAPAAAKKKHDVPADK-RNHRTDKVKYQVTGNDSRDACVKLMYDGLAFMSEAMPDE 167
Query: 169 EITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+ +A VE + + A K K RS+ N+ ++ NP LR+RV G+
Sbjct: 168 ILV----------IAKQVEAAAYTNAGSINDAYKAKMRSLFQNLKNKTNPQLRKRVFSGD 217
Query: 229 VTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYH 288
++ +R MT +E+ SDERR E++ ++ + + + V + +K + +F+C C + SY
Sbjct: 218 ISAKRFVVMTHDEMKSDERRAEDKILEQENINQAMVAQVEKAISKEFQCGKCKQKMVSYS 277
Query: 289 QMQTRSADEPMTTYVTCAECNKRWK 313
Q QTRSADEPMTT+ C C RWK
Sbjct: 278 QAQTRSADEPMTTFCECMNCGNRWK 302
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + + AL DD+ V ++AA +E ++++L+ + +
Sbjct: 185 DSVRDKCIEMISAALK------MDDDYKEFGVNC---DKMAAEIEDHIYQELKGTDMKYR 235
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP LRR VL G ++ R+A MT EE+ASDE ++ + + + +
Sbjct: 236 NRVRSRISNLKDPKNPGLRRNVLCGAISAGRIAKMTAEEMASDELKELRNAMTQEAIREH 295
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F+C C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 296 QMAKTGGTATDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 154/335 (45%), Gaps = 68/335 (20%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L L+ P+T +L T++G ++ + +K +++ + L+ WK+ +L ++
Sbjct: 23 DLLNKLKDMPMTLTVLQKTRIGMTVNNFRKAASKDELVVLSKTLIKSWKK--LLSSDSTP 80
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+K + + +QT + + + + +R+ S A D +R K R+
Sbjct: 81 SKSDKKEKEKSSNSPEQTDSPSEMMDVKDSQGSEPGKTLMRQDSEASITNDPVRIKCREL 140
Query: 153 LEKALSRVASEAADDEEITDRV-KARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L AS DEE+ R+ A+ PK++AA +E + + + K + RS + N
Sbjct: 141 L-------ASSLVLDEEVKVRIPNAQCPKELAAKIEDSIHLEFKNTDQKYKARIRSRVAN 193
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEK 267
+ D+KNP L+ V++G + PER+A M+ EE+ASDE RQ ++AKF + ++ +
Sbjct: 194 LKDKKNPKLKEGVIMGLIPPERIANMSAEEMASDEMRQ----LRAKFTKESIDDHQMSRQ 249
Query: 268 KKGTTDQFKCSGC----------------------------------------------- 280
+ TD FKC C
Sbjct: 250 EGTVTDLFKCGKCGKKNCTYNQEMASDEMRQLRAKFTKESIDDHQMSRQEGTVTDLFKCG 309
Query: 281 --GKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
GK NC+Y+Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 310 KCGKKNCTYNQLQTRSSDEPMTTFVFCMECGNRWK 344
>gi|398398099|ref|XP_003852507.1| hypothetical protein MYCGRDRAFT_59339, partial [Zymoseptoria
tritici IPO323]
gi|339472388|gb|EGP87483.1| hypothetical protein MYCGRDRAFT_59339 [Zymoseptoria tritici IPO323]
Length = 314
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 26/295 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGN 93
+ L L+ F T DLL +++G ++ L+++ KV A+ L++ WKQ++ K+ +
Sbjct: 31 NILAPLETFKATEDLLRQSKIGVAVTKLRQNKDPKVSETATRLVNRWKQEVQSKKKRPDS 90
Query: 94 KRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK----------- 142
+ +++ ++S +++ S ++ KK AS+ + S D K
Sbjct: 91 SPAPANKALNGAANGRSSGTSSPAPNGSKSEVKKEPASVPRQSKVDPEKRNTGADGVDHK 150
Query: 143 ---DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
D++RD K + ++ ++ E+ D +T VA VE FE +
Sbjct: 151 ITGDAVRDGCLKLMYDGIAFMSKESPD-AVLT----------VARKVEVAAFEHFKRETN 199
Query: 200 AE-KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
AE K K RS+ N+ N LR+ V E+ PE+ MT EEL S E+R E+ I+ +
Sbjct: 200 AEYKTKMRSLFQNLKMRSNTLLRKNVFSEEIPPEKFVAMTSEELKSAEKRAEDALIEKEN 259
Query: 259 MFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
M K P++ K + C C S SY Q QTRSADEP+TT+ C C RWK
Sbjct: 260 MNKSMTPKEAKAISTTMTCGKCKGSAVSYSQAQTRSADEPLTTFCECTLCGNRWK 314
>gi|121705046|ref|XP_001270786.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
gi|119398932|gb|EAW09360.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
Length = 304
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 34/292 (11%)
Query: 36 LKHLQA-FPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ+ T DLL ST+VG + K+H +V +SE++ W+ E N K
Sbjct: 32 LKELQSGVKATEDLLRSTRVGIIVNKFKQHKSPEVARLSSEIVSKWRN------EVNKQK 85
Query: 95 RNGS-KLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI---RKPSHAD-----QAKDSM 145
+GS +S + + + A +T +K + S+ ++ AD Q + +
Sbjct: 86 VSGSPSVSQRSSGSPRPAPNGAASPAGTTPSDKMSKLSVPPDKRTWKADGVDVNQTSNKI 145
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVMFEKLRPMGVAEK 202
RD + L ++E+ P+ V A +VE F L P +
Sbjct: 146 RDSCIGLMYDGLCLNSTES--------------PRAVLSKACAVEAAAFSALGPETKEQY 191
Query: 203 R-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
R K RS+ N+ ++ NP LR RVL +VTPE+ MT +EL S E+R+++ +I+ + M K
Sbjct: 192 RTKIRSLYQNLKNKSNPTLRTRVLANDVTPEQFVKMTYDELKSAEQREQDRKIQKENMDK 251
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
V + ++ + +C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 252 AMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSWR 303
>gi|393220677|gb|EJD06163.1| transcription elongation factor [Fomitiporia mediterranea MF3/22]
Length = 296
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 136/271 (50%), Gaps = 21/271 (7%)
Query: 48 LLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLS----VD 103
LL +++G ++ L+ + ++V + A EL+ WK ++ K ++G + + ++ V
Sbjct: 40 LLRESRIGLAVGKLRSNVSKEVADLAKELVKKWKNEVGGSKGSSGPATHHNAVAKPIPVR 99
Query: 104 EKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE 163
+ ++ S +G S A+ K + + KD RDK + + +L V
Sbjct: 100 KASVAESVGSPTTPTGSSFARSSKTDGVV-----INVTKDKTRDKCIELIYDSL--VLDS 152
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLR-PMGVAEKRKHRSIMFNMSDEKNPDLRR 222
AA + I R A ++E + E G K K RS+ N+ D+ NP LR
Sbjct: 153 AAPSDLILKR---------ATAIESTVLEDHNNDTGKEYKGKIRSLFLNLKDKNNPGLRA 203
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
++ GE+ + M+ +E+AS+ER+ ++ I+ + +K E+++ TD F+C C +
Sbjct: 204 NIVSGELEVAKFCRMSSQEMASEERKAADKAIQEENFYKSLGAEEQQAETDAFQCGKCKQ 263
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
Y Q QTRSADEPMTT+VTC CN RWK
Sbjct: 264 RKTRYRQAQTRSADEPMTTFVTCVNCNHRWK 294
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 42 FPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLS 101
+ V +L ++ G ++ L+ H ++V AA +L+ WK + K T + +
Sbjct: 34 WEVNETILRESKAGLAVGKLRTHSNKEVSQAAKDLVKKWKNDVERLKATKSPAPKAAPPT 93
Query: 102 VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVA 161
+ + TA K T + D +R+ + K + AL+ A
Sbjct: 94 KAAPPPAPAPAKPSTVA--RTADTDKVTLNF--------TPDKLRNALSKLIYNALACDA 143
Query: 162 SEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLR 221
+ D I + KARD VE ++ + A K K R++ N+ + NP LR
Sbjct: 144 T--CDSNTIAE--KARD-------VEAAVYNQNGCTNEAYKTKLRTLTANLKAKSNPGLR 192
Query: 222 RRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCG 281
RVL GE+ P RLATM+ ++AS+ER+ + +I+ + + + +++ TD F+C C
Sbjct: 193 ARVLKGELEPARLATMSVADMASEERKAADSKIREQTIHESLGAAEQEAETDAFQCGRCK 252
Query: 282 KSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ C Y Q QTRSADEPMTT+VTC CN RWK
Sbjct: 253 QRKCRYRQAQTRSADEPMTTFVTCTVCNNRWK 284
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP +AA +E ++ L V K + RS + N+ D KNP+LR++ L+G++TPE L+ M
Sbjct: 28 DPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEELSKM 87
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
TPEE+ASD+ +Q ++ + ++ + + TDQFKC C K NCS Q+ R DE
Sbjct: 88 TPEEMASDDMKQMRQKYVQDSINAAQMAKVQGTKTDQFKCERCDKRNCS--QLHIRDGDE 145
Query: 298 PMTTYVTCAECNKRWK 313
P+ T+V C EC RWK
Sbjct: 146 PIITFVICDECGNRWK 161
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 79/124 (63%)
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
+F + + K + RS + N+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++
Sbjct: 5 IFRDVGNTDMKYKNRVRSRIANLKDAKNPDLRRNVLCGTITPQQIAVMTSEEMASDELKE 64
Query: 250 ENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECN 309
+ + + + + ++ TD F CS C K NC+Y Q+QTRS+DEPMTT+V C EC
Sbjct: 65 IRKAMTKEAIREHQMARTGGTQTDLFTCSKCRKKNCTYTQVQTRSSDEPMTTFVVCNECG 124
Query: 310 KRWK 313
RWK
Sbjct: 125 NRWK 128
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVD 103
+T +L ++ G ++ L++H ++V A E++ WK ++ K+ +G K +G+K
Sbjct: 36 ITEAVLRESKAGLAVGKLRQHSSKQVSELAKEIVKKWKTEVEREKQASGGK-SGAKPPAA 94
Query: 104 EKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK-----DSMRDKIRKDLEKALS 158
+K ++ + TA S + + +D K D RDK + + AL
Sbjct: 95 KKAASSSAAATPSTPVTPTASNAGGKFSDTRSAKSDGVKVEFTGDKTRDKCAELIYDAL- 153
Query: 159 RVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNP 218
V A E I R K +E+ + K K RS+ N+ D+ NP
Sbjct: 154 -VFDSGAPSELILSRAK---------DIEKTVLADNGGANANYKAKIRSLFVNLKDKNNP 203
Query: 219 DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
LR V+ GE+ +L M+ ++AS+ER+ + +IK + +FK +++ TD F+C
Sbjct: 204 GLRECVISGELPVSKLCKMSSADMASEERKAADAKIKEENLFKTLGAGEQEAETDAFQCP 263
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C + C Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 264 RCKQRKCRYRQQQTRSADEPMTTFVTCTVCKNRWK 298
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 85/140 (60%), Gaps = 8/140 (5%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKH----RSIMFNMSDEKNPDLRRRVLIGEVTPER 233
DP+++A +E EKL + + + RS +FN+ D+KN LR VL G V E+
Sbjct: 172 DPEELAVQIE----EKLHSVHRGTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEK 227
Query: 234 LATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTR 293
ATMT EE+AS E R ++ + + + ++ ++ +D FKC CGK NC+Y Q+QTR
Sbjct: 228 FATMTSEEMASPEIRNMRDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTR 287
Query: 294 SADEPMTTYVTCAECNKRWK 313
S+DEPMTT+V C EC RWK
Sbjct: 288 SSDEPMTTFVFCLECGNRWK 307
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 93/155 (60%), Gaps = 8/155 (5%)
Query: 161 ASEAADDEEITDRVKARDPKQVAASVERVMF--EKLRPMGVAEKRKHRSIMFNMSDEKNP 218
AS A D E+ + + A VAA +E +F E L+ + A + K R+ + + ++KNP
Sbjct: 172 ASLAVDREDPSKHIVA-----VAAEIESAVFKNEYLK-VNEAYRNKLRTFVMQLRNKKNP 225
Query: 219 DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+LR R+L ++T ER M+P E+A +E ++E E++ + +F + +K+ TD+F C
Sbjct: 226 ELRERLLTRQITAERFIKMSPNEMAPEELKKEIEKMHKQNLFDAQGATEKRAVTDRFTCG 285
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 286 KCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 320
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 143/278 (51%), Gaps = 34/278 (12%)
Query: 48 LLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSV---DE 104
LL T+VG ++ + ++Q+ +++ W++ + N + S +SV ++
Sbjct: 39 LLRETKVGVAVNKFRTSSNPEIQSIVKKMIRKWRESV-----QNEKTKKKSSVSVSDGNK 93
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
+K +N+V KE K + R P D I ++ + L+R AS +
Sbjct: 94 SGEKGAEQTNSVAKAL--PKENKFHSGPRNPK---------TDGIDTNIYENLTRNASVS 142
Query: 165 A-------DDEEITDRVKARDPKQVAASVERVMF--EKLRPMGVAEKRKHRSIMFNMSDE 215
A + ++ ++ + A VA +E ++ EKL + + + K R+ N+ ++
Sbjct: 143 ALYTALAIERDDSSEHIVA-----VAKDIENEVYRSEKL-SISDSYRTKLRTFTMNLRNK 196
Query: 216 KNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQF 275
KNPDLR R+L G+++PE M+P ++A + ++E E++ + +F+ + +K+ TD+F
Sbjct: 197 KNPDLRDRLLSGKISPEAFIKMSPNDMAPEALKKEIEKLHKQNLFEAQGATEKRAVTDRF 256
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 257 TCGKCKHKRVSYYQMQTRSADEPLTTFCTCENCGNRWK 294
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 84/132 (63%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+ A +E ++++++ + K + RS + N+ D KNP LR+ VL G + R+ATM+ EE
Sbjct: 487 MGAEIEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGSIELRRIATMSAEE 546
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ASDE +Q + + + + ++ + TTD +C C K NC+Y+Q+QTRSADEPMTT
Sbjct: 547 MASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTT 606
Query: 302 YVTCAECNKRWK 313
+V C EC RWK
Sbjct: 607 FVLCNECGNRWK 618
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 147/319 (46%), Gaps = 55/319 (17%)
Query: 36 LKHLQAFPV-TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
L+ LQA + + +LL +++ G ++ L+ P V N A +L+ WK+ I E N K
Sbjct: 29 LQKLQAEVIPSEELLKASKAGIAVGKLRSVPSPGVANLAKDLVKKWKEVI----EENKRK 84
Query: 95 R-----NGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHAD---------- 139
R +G K +K + + S S V S + A A + RKP D
Sbjct: 85 RKREEGDGVKEEAGKKVKAEPSTSAIVSSNGTPA----AMSPDRKPEIKDIKPKVEQPNS 140
Query: 140 ---------------------QAKDSMRDKIRKDLEKALSRVASEAADD---EEITDRVK 175
+DS D + L+ E+ D E I + +
Sbjct: 141 GASSSSPPKRPPLSTIDSSRTTPRDSKSDGVAGTLKAEAETGGDESVRDKCVEMIYNALA 200
Query: 176 ARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+ + ++E +F++ + E R K RS+ N+ D+ NP LR +++G +T E+L
Sbjct: 201 GDSTAERSVAIEAAVFKQQKSQSGNEYRAKMRSLFLNLKDKGNPGLRNEIVLGYLTAEKL 260
Query: 235 ATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRS 294
A+++ E++AS+ R NE+I +FK + + + TD FKC C + C+Y+QMQTRS
Sbjct: 261 ASLSKEDMASESIRAMNEKIANDNLFKAKAVGETQAETDAFKCGRCQQRKCTYYQMQTRS 320
Query: 295 ADEPMTTYVTCAECNKRWK 313
ADEPMT C RWK
Sbjct: 321 ADEPMTN------CGNRWK 333
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFE--KLRPMGVA 200
DS+RDK + L AL ADD+ V ++A+ +E + E +L+ +
Sbjct: 163 DSVRDKCVEMLSAALK------ADDDYKDYGVNC---DKMASEIEDHILELGELKSTDMK 213
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
+ + RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + +
Sbjct: 214 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIR 273
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 274 EHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 326
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 150/333 (45%), Gaps = 45/333 (13%)
Query: 9 FGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKK----- 63
F KK A+ AT +S LK L+ +TYDLL T +GK++ L K
Sbjct: 26 FTLEKKQANHDYATIQS---------ILKMLEFKQITYDLLKETLIGKTITSLTKIEAIN 76
Query: 64 ----HPCEKVQNAASELLHIWKQKIVLGKETNG---NKRNGSKLSVDEKFQKQTSDSNAV 116
+ EKV+ A+ LL W+ KI ++ G +++ SK+ + K + ++
Sbjct: 77 DDAKNDAEKVRQKAAGLLGSWR-KISQSEKKGGKTEDRKENSKVEGQKNGAKNNASNSNH 135
Query: 117 KSGCSTAKEKKA--------TASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDE 168
S T++ KK P RD +R + K + ++ E + E
Sbjct: 136 SSAQLTSQSKKEEPKQTPDEIQPFIPPGMKVNTGTQYRDSLRINFIKYM-QIPEEGVEYE 194
Query: 169 EITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
EI A Q+ +E +++ P + K RS+MFN+ D KNPDLR ++ G
Sbjct: 195 EIVLTRAA----QLGLQIEDELYKSF-PRLAEYQNKARSLMFNLKDPKNPDLRMSLIEGV 249
Query: 229 VTPERLATMTPEELAS----DER---RQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCG 281
+ P +L + + LAS DER +Q N + F KKG F C C
Sbjct: 250 IEPNQLVRLDSKSLASKALQDERNKTQQANLNARRSDWFIENAA--KKGNKGFFTCKKCH 307
Query: 282 KSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
N +Y QMQTR ADEPMT ++TC +C +WKC
Sbjct: 308 SKNTTYFQMQTRGADEPMTNFITCLDCKNQWKC 340
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 87/133 (65%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A+ +E ++++L+ + + + RS + N+ D +NP LRR VL G ++ +A MT E
Sbjct: 228 KMASEIEDHIYQELKGTDMKYRNRVRSRISNLKDPRNPSLRRNVLCGAISTSLIARMTAE 287
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE ++ + + + + ++ + TTD F+CS C K NC+Y+Q+QTRSADEPMT
Sbjct: 288 EMASDELKELRSAMTLEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 347
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 348 TFVLCNECGNRWK 360
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%), Gaps = 18/275 (6%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T LL T+VG + + H + + +++ W++ + K + GS S
Sbjct: 36 TEKLLRETKVGVVVNKYRSHDNKDISTLVKKMIRGWREAVQNEKNSKKKPSAGSPESTPA 95
Query: 105 KFQKQTSDS-NAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD--LEKALSRVA 161
S + NA KSG S A + T S + + +D ++ D ++ + S +A
Sbjct: 96 SSGSPASTTLNADKSGASAANGR--TFSGPRNAKSDGVNTTLYDNPTRNASVGALYSSLA 153
Query: 162 SEAADDEE--ITDRVKARDPKQVAASVERVMFE-KLRPMGVAEKRKHRSIMFNMSDEKNP 218
E D + IT +A+ +E +F+ + + A + K RS N+ ++KNP
Sbjct: 154 VERDDSPQHIIT----------IASEIESEVFKSEYSKVNDAYRNKLRSFTMNLRNKKNP 203
Query: 219 DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+LR RVL ++T + MTP E+A + ++E E++ + +F + +K+ TD+F C
Sbjct: 204 ELRERVLSKQITASQFIKMTPNEMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCG 263
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 264 KCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 298
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 80/124 (64%)
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
+F++L+ + + + RS + N+ D KNP+LRR VL G + P +A MT EE+ASDE ++
Sbjct: 276 IFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAEEMASDELKE 335
Query: 250 ENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECN 309
+ + + + ++ + TD F+C C K NC+Y+Q+QTRSADEPMTT+V C EC
Sbjct: 336 LRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECG 395
Query: 310 KRWK 313
RWK
Sbjct: 396 NRWK 399
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 142/279 (50%), Gaps = 19/279 (6%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T LL T+VG + KK +++ + +++ WK I N++ SKLS
Sbjct: 37 TEKLLRETKVGVEVNKFKKSSNQEIASMVKKIIGSWKDSI--------NRQKRSKLSSTS 88
Query: 105 KFQKQTS----DSNAVKSGCSTAKEKKATASIRKPSHA-DQAKDSMRDKIRKDL-EKALS 158
T+ D + K+G S +K+ + I K + A + ++S D + L L
Sbjct: 89 TPSPSTNASMHDKQSHKTGTSESKKDDKSTHINKSTVAKGKPRNSRIDGVNTTLYNHKLR 148
Query: 159 RVASEAADDEEITDRVKARD-PKQVAASVERVMFEKLRPMGVAEKR---KHRSIMFNMSD 214
+ +A D + D ++ ++A VE M +K V EK+ K+R + N+
Sbjct: 149 DMVVKALYDALVKDSTESSSLILKLATEVELEM-KKFSDPDVNEKQYRDKYRVVYSNLIS 207
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+ NP+L+ R++ G+V+P RL T P+ELA + ++E EEI K ++ + ++ TD+
Sbjct: 208 KNNPELKFRIVGGDVSPARLVTCDPKELAPESLKKELEEIAKKNLYNAQGATVQRSVTDR 267
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 268 FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 306
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 18/253 (7%)
Query: 67 EKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCS---TA 123
E+V A L+ WK+ + + G NG S + + T + A S S T
Sbjct: 13 EEVITLAKLLIKSWKKLLSGTPGSKGGDSNGGS-SKESETTVSTPKATAQTSAASKQTTY 71
Query: 124 KEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVA 183
K+A + ++ S +S+R K R+ + AL + D D +A
Sbjct: 72 SAKQAPHNAKQTSFPADTTNSVRLKCRELISSAL-----------KCDDMPDGCDLDGLA 120
Query: 184 ASVERVMFEKLRPMG---VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
A +E + G + K + RS + N+ D KNP+LR VL G + P+R+A MT +
Sbjct: 121 AKIEEYILSWHCEFGDTNMKYKNRVRSRVSNLKDSKNPNLRLNVLHGAIDPDRIARMTAD 180
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE +Q ++ + + ++ TD KC C KSNC+Y+Q+QTRSADEPMT
Sbjct: 181 EMASDEMKQMRQKFTKEAINDHQMAVTGGTKTDLLKCGKCRKSNCTYNQVQTRSADEPMT 240
Query: 301 TYVTCAECNKRWK 313
T+ C EC RWK
Sbjct: 241 TFCYCNECGHRWK 253
>gi|358387656|gb|EHK25250.1| hypothetical protein TRIVIDRAFT_81951 [Trichoderma virens Gv29-8]
Length = 304
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 45/300 (15%)
Query: 34 DALKHLQAF----PVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKE 89
+ALK L++ T ++L +T+ G + L+ +P +++ AASEL+ WK+ ++ +E
Sbjct: 28 NALKLLESLKKDASPTEEMLRATRAGVFVGKLRSNPNKEIARAASELVIKWKK--LVEQE 85
Query: 90 TNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATAS--IRKPSHADQAK----- 142
N K QK + S + + S +T S +K D K
Sbjct: 86 KNS------------KLQKAKTGSPSAPAAASLPNPSSSTPSGGAKKAFKGDPEKRKFDT 133
Query: 143 ---------DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
++R++ + L+ ++E+ D V A+ A +VE F
Sbjct: 134 DGVSIKRTESNVRNQCIGLIYNGLAYRSTESETD------VIAK-----AVAVENAAFTL 182
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEE 253
G K+K RS+ N+ + N DL +RV+ G++TP R TMT E+L S+++++ +E
Sbjct: 183 FNGEGAEYKKKIRSLFSNLKSKTNRDLGKRVMSGDITPSRFVTMTDEDLKSEDQKKMEKE 242
Query: 254 IKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + M K +VP +K +D +C C K SY Q QTRSADEPMTT+ C C RWK
Sbjct: 243 LEKENMKKAQVPMAEKSISDSLECGKCKKKKVSYTQAQTRSADEPMTTFCECMNCGNRWK 302
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 13/171 (7%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D+ R K + L +AL + S+A D ++A +E MF+ K
Sbjct: 30 DATRQKCFEMLAEALEQSESDA-------------DYFELALDIEAEMFKLFGETNPNYK 76
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
K R + N+ + KN DLR VL G ++PERL MT +ELAS E +++ + ++ + +
Sbjct: 77 AKFRQLFMNLKNVKNHDLRLGVLNGHISPERLCQMTSQELASKELQEQRKALEEACLKEA 136
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K+ TT+ F+C C K C+Y+Q+QTRSADEPMTT+V C CN RW+
Sbjct: 137 IRGGQKQATTNMFRCHKCKKRECTYYQLQTRSADEPMTTFVQCTNCNNRWR 187
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 146/279 (52%), Gaps = 36/279 (12%)
Query: 48 LLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQ 107
LL T+VG ++ + ++Q+ +++ W++ + K + S +SV
Sbjct: 39 LLRETKVGVAVNKFRTSSNPEIQSLVKKMIRKWRESVQSEKT-----KKKSSVSV----- 88
Query: 108 KQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMR----DKIRKDLEKALSRVASE 163
SD+N KSG A++ + A + P ++ R D I ++ + L+R AS
Sbjct: 89 ---SDNN--KSGEKAAEQTNSVA--KAPPKENKFHSGPRNPKTDGIDTNIYENLTRNASV 141
Query: 164 AA-------DDEEITDRVKARDPKQVAASVERVMF--EKLRPMGVAEKRKHRSIMFNMSD 214
+A + ++ ++ + A VA +E ++ EKL + + + K R+ N+ +
Sbjct: 142 SALYTALAIERDDSSEHIVA-----VAKDIENEVYRSEKL-SISDSYRTKLRTFTMNLRN 195
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+KNPDLR R+L G+++PE M+P ++A + ++E E++ + +F+ + +K+ TD+
Sbjct: 196 KKNPDLRDRLLSGKISPEAFIKMSPNDMAPEALKKEIEKLHKQNLFEAQGATEKRAVTDR 255
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F C C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 256 FTCGKCKHKRVSYYQMQTRSADEPLTTFCTCENCGNRWK 294
>gi|449020026|dbj|BAM83428.1| probable transcription elongation factor S-II [Cyanidioschyzon
merolae strain 10D]
Length = 794
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 98/174 (56%), Gaps = 14/174 (8%)
Query: 150 RKDLEKALSRVASEAADDEEI-TDRVKARDP---KQVAASVERVM-----FEKLRPMGVA 200
R D+ +AL+ V AA +E T+ V A + + +ER + F+ RP A
Sbjct: 626 RGDIVRALTDVFIAAATEEATPTEHVNAATINLCRSLCIELERALNAKFSFDFARPDYSA 685
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
K+R + N+ +N DLR R+L E++P L M+ E L +++ R+ EI + +F
Sbjct: 686 ---KYRELKANL--RRNADLRWRLLRQELSPAELVDMSAEALKTEQAREREAEIAERMLF 740
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ + +TDQF+C CG+ +C+Y QMQTRSADEPMTT+VTC C RWKC
Sbjct: 741 HKQRGIPQAASTDQFRCGKCGQRSCTYFQMQTRSADEPMTTFVTCTHCGNRWKC 794
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 34/300 (11%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKI-------VLG 87
L+ L++ +T ++L T VG + ++K + +V ++ WK+ + V
Sbjct: 29 LRRLRSIEMTLEILTKTGVGIIINKIRKESEDPEVATLGKNMIKQWKKLVPDKSEAPVSC 88
Query: 88 KETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAK-----EKKATASIRK-------P 135
T GN + + + D K +++ NA G AK EKK + I P
Sbjct: 89 TNTVGNNNSDNGNNNDNKHSPESNSYNACDDGPQEAKRSRPSEKKESTEISGNASRGFFP 148
Query: 136 SHADQAKDSMRDKIRKDLEKAL--SRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
H D +R K R+ L+ AL + S A + E + A +E +++
Sbjct: 149 VHTLTTTDQVRLKAREMLQSALESGNIPSGAYESEFL------------AIRIESSIYDL 196
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEE 253
K++ R+ + N+ D NP+LR VL+G V+P++LA+MT EE+AS E ++ E+
Sbjct: 197 FNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEEMASKEMKELREK 256
Query: 254 IKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD +C C ++ C+Y+Q+QTRSADEPMTT+V C C RWK
Sbjct: 257 YTKETIEDHQMAVTGGTETDLLRCGKCKQTKCTYNQVQTRSADEPMTTFVYCNNCGHRWK 316
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL A + D + A + + + ++++L+ + +
Sbjct: 162 DSVRDKCVEMLSAALK--AEDDYKDYGVNCDKMASEIEDHILELRSHIYQELKSTDMKYR 219
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 220 NRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 279
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 280 QMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 330
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 85/132 (64%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E ++++++ + K + RS + N+ D KNP LR+ VL G + R+A+M+ EE
Sbjct: 353 MAAEIEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTLALSRIASMSAEE 412
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ASDE +Q + + + + ++ + +TD +C C K NC+Y+Q+QTRSADEPMTT
Sbjct: 413 MASDELKQLRNTLTQEAIREHQMAKTGGTSTDLLQCGKCKKKNCTYNQVQTRSADEPMTT 472
Query: 302 YVTCAECNKRWK 313
+V C EC RWK
Sbjct: 473 FVLCNECGNRWK 484
>gi|453082690|gb|EMF10737.1| transcription elongation factor S-II [Mycosphaerella populorum
SO2202]
Length = 312
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 142/293 (48%), Gaps = 31/293 (10%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKR 95
LK L ++ T DLL +++G ++ L+++ +KV AS+L++ WKQ++ K+ G
Sbjct: 34 LKPLDSWRATEDLLRVSRIGIAVTKLRQNKDQKVAETASKLVNRWKQEVSAKKKKAG--- 90
Query: 96 NGSKLSVDEKFQKQTSDSNAVKSGC--------------STAKEKKATASIRKPSHADQA 141
G + K + ++A S ST K T K H+
Sbjct: 91 -GDSPAPPAAGVKSGTGASATGSPATPPVKTELKKEQRKSTVDPSKRTTITDKIDHSVTG 149
Query: 142 KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
D +RD K + ++ ++ E+ D + D VA VE FE R +
Sbjct: 150 -DKVRDGCLKLMYDGIAFMSEESPD--AVFD---------VARRVEVAAFEHYRQETSND 197
Query: 202 -KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
K K RS+ N+ + N LRR V ++ +RL TMT E+L S++RR+E+E +K + M
Sbjct: 198 YKTKMRSLFQNLKMKDNKLLRRDVFSQKIDAKRLVTMTSEDLKSEDRRKEDEAMKEENMR 257
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
P++ K + F C+ C +S SY Q QTRSADEP+TT+ C C RWK
Sbjct: 258 VAMTPQEAKAISTTFTCAKCKESKVSYSQAQTRSADEPLTTFCECTVCGHRWK 310
>gi|380476055|emb|CCF44922.1| transcription elongation factor S-II [Colletotrichum higginsianum]
Length = 302
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNG------- 97
T ++L S++ G + L+ + +++ AA+EL+H WK+ + K+ K++
Sbjct: 44 TEEMLRSSRAGVFVGKLRSNSNKEIARAATELVHKWKKLVEAEKQGKIKKQSSPAAPSPT 103
Query: 98 --------SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
S ++++ F+ A GC T + D+ +DS + I
Sbjct: 104 QAPAPKPSSSNAMNQPFKGNPELRRAKSDGCDTKRT------------GDETRDSCIELI 151
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
L A AS +TD V A+ A +VE F + + + K RS+
Sbjct: 152 YNGL--AYRSTAS-------VTD-VLAK-----AVAVEHAAFSHYKGVTKEYREKLRSLF 196
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ + N L V+ G++ PER MT EEL S+E+R++ + ++ + M K +VP +K
Sbjct: 197 SNLKVKSNRQLGVNVMEGKIAPERFVVMTHEELKSEEQRKKEDALQLENMKKAQVPMAEK 256
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+D KC CG+ SY Q QTRSADEPMTT+ C C RWK
Sbjct: 257 SISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK 300
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 75/112 (66%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
+ + RS + N+ D KNP+LR+ VL G VTP+ +ATMT EE+ASDE R+ + + + +
Sbjct: 8 RNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIRE 67
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD +C C K NCSY+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 68 HQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNECGNRWK 119
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 24/272 (8%)
Query: 48 LLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQ 107
LL T+VG ++ + H + + +++ WK+ + E N K+ S +S
Sbjct: 39 LLRETKVGVAVNKYRSHSNSDINSLVKKMIRTWKESV--QNEKNSKKKTASPVS------ 90
Query: 108 KQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADD 167
+ NA S +E K+ A ++ D + L +R AS +A
Sbjct: 91 ----NGNA---ASSVKEEVKSEAGSTNSKFHQGPRNPKTDGVNTTLYDNSTRNASVSA-- 141
Query: 168 EEITDRVKARDPKQ-----VAASVERVMFE-KLRPMGVAEKRKHRSIMFNMSDEKNPDLR 221
T RD + VA +E +F+ + + + K R+ N+ ++KNP+LR
Sbjct: 142 -LYTALAIERDDRSSHILSVAREIESEVFKSEYSNVNDNYRNKLRTFTMNLRNKKNPELR 200
Query: 222 RRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCG 281
R+L G + P M+P E+A + ++E E++ K +F + +K+ TD+F C C
Sbjct: 201 ERLLSGGIKPAEFIKMSPNEMAPEALKKEIEKLHKKNLFDAQGATEKRAVTDRFTCGKCK 260
Query: 282 KSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 261 HKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 292
>gi|119492710|ref|XP_001263674.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
gi|119411834|gb|EAW21777.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
Length = 304
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 150/316 (47%), Gaps = 39/316 (12%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA A ++EP LK LQ T DLL ST+VG + K+H +V
Sbjct: 11 KAKALTKAATQNEPTAN-IVSLLKELQTGVKATEDLLRSTRVGIIVNKFKQHKSPEVARL 69
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQ---KQTSDSNAVKSGCSTAKEKKAT 129
+SE++ W+ E N K +GS SV ++ + + A +G +T +K +
Sbjct: 70 SSEIVSKWRN------EVNKQKASGSP-SVSQRSSGSPRPAQNGTASPAG-TTPSDKLSK 121
Query: 130 ASI---RKPSHAD-----QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQ 181
S+ ++ AD Q + +RD + L ++E+ P+
Sbjct: 122 LSVPPDKRTWKADGVDINQTSNKIRDSCIGLMYDGLCLNSTES--------------PRA 167
Query: 182 V---AASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
V A +VE F L P + R K RS+ N+ ++ NP LR RVL EVTPE+ M
Sbjct: 168 VLSKACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKM 227
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
+ +EL S E+R++ +I+ + M K V + ++ + +C CG+ +Y + QTRSADE
Sbjct: 228 SHDELKSAEQREQERKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADE 287
Query: 298 PMTTYVTCAECNKRWK 313
PMT + TC C K W+
Sbjct: 288 PMTLFCTCMNCGKSWR 303
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 31/289 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP----CEKVQNAASELLHIWKQKIVLGKE 89
D L L+ +T +LL S+++G + L+K ++ + L+ WK ++ +
Sbjct: 27 DLLNALKEEKITKELLESSKIGHVVNALRKGAQTSGHAEIAAQSKSLIKQWKAQMA---Q 83
Query: 90 TNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
G NG+ V +K + + K S +K+ + + +P+ D +R+K
Sbjct: 84 NAGGGDNGAPAKV-QKTESSSQKREKEKEKTSDSKDDFSLGASIQPTA-----DPVRNKS 137
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVM--FEKLRPMGVAEKRK 204
R+ L+KAL + D+ K +P+ V AA +E + F + K
Sbjct: 138 RELLQKAL------------LVDKDKF-NPQFVSLMAAKIEEAIYNFHGNSSSDTKYRNK 184
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
RS N+ D KNPDLR V+ G ++P++LA+M PEE+AS + ++ ++ + + ++
Sbjct: 185 IRSRYSNLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEAINDHQM 244
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + TD F C C C+Y Q+QTRSADEPMTT+V C C RWK
Sbjct: 245 AQNEGTQTDMFSCGKCKSKKCTYTQLQTRSADEPMTTFVYCMACGNRWK 293
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 80/124 (64%)
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
++++++ + K + RS + N+ D KNP LR+ VL G + R+A+M+ EE+ASDE +Q
Sbjct: 299 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEEMASDELKQ 358
Query: 250 ENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECN 309
+ + + + ++ + TTD +C C K NC+Y+Q+QTRSADEPMTT+V C EC
Sbjct: 359 LRNTLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECG 418
Query: 310 KRWK 313
RWK
Sbjct: 419 NRWK 422
>gi|310789962|gb|EFQ25495.1| transcription elongation factor S-II [Glomerella graminicola
M1.001]
Length = 302
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 42/284 (14%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNG------- 97
T ++L S++ G + L+ + + + AA+EL+H WK+ + K+ K++
Sbjct: 44 TEEMLRSSRAGVFVGKLRSNSNKDIARAATELVHKWKKLVEAEKQGKIKKQSSPAAPSPT 103
Query: 98 --------SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
S ++++ F+ A GC T + D+ +DS + I
Sbjct: 104 QASAPKPSSSNAMNQPFKGNPELRRAKTDGCDTKR------------TGDETRDSCIELI 151
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
L S A ++ +T A +VE + + + + K RS+
Sbjct: 152 YNGLA-----YRSTAPINDVLTK----------AVAVEYAAYIHFKGVTKEYREKLRSLF 196
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKK 269
N+ + N L V+ G++TPER MT EEL SDE+R++ + ++ + M K +VP +K
Sbjct: 197 SNLKVKSNRQLGINVMEGKITPERFVVMTHEELKSDEQRKKEDALQQENMKKAQVPMAEK 256
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+D KC CG+ SY Q QTRSADEPMTT+ C C RWK
Sbjct: 257 SISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK 300
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 19/295 (6%)
Query: 25 SEPEVQRCADALKHLQAFPV-TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQK 83
++ V+ L+ L+ V + +L+ +T++G ++ L+ H ++ A EL+ WK +
Sbjct: 21 ADSNVEDILSLLRQLKEVVVPSEELIRATKIGVAVGKLRTHSHARISELAKELVKSWKSQ 80
Query: 84 IVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKD 143
I + + K D T S++ S S++ + +S + D +
Sbjct: 81 IEKQRRESPASEKSKK---DAASSADTKSSSSSSSSLSSSAAPASNSSSTNSKNVDINFE 137
Query: 144 SMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE-- 201
+ D++R K L + E+ D +P+ V AS ++ +G +
Sbjct: 138 VLNDRVRNACLKLL-------YNSLEVQDHA---EPQTVFASAMKIEEAAYTKIGASTTN 187
Query: 202 ---KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
+ K RS+ N+ D+ NP+LR++VL G + P L M EELAS +++ E I+ +
Sbjct: 188 NDYRGKVRSLSLNLKDKNNPELRQKVLEGHIDPGMLVVMRSEELASKSLKEQQESIRQQN 247
Query: 259 MFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + E ++ TD F+C C + Y+QMQTRSADEPMTT+VTC CN +WK
Sbjct: 248 LHNAKGAEAQEAETDAFQCGKCKQRKTRYYQMQTRSADEPMTTFVTCVNCNHKWK 302
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 25/286 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP----CEKVQNAASELLHIWKQKIVLGKE 89
D L L+ +T +LL S+++G + L+K ++ + L+ WK ++ +
Sbjct: 27 DLLNALKEEKITKELLESSKIGHVVNALRKGAQTSGHAEIAAQSKSLIKQWKAQMA---Q 83
Query: 90 TNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
G NG+ V +K + + K S +K+ + + +P+ D +R+K
Sbjct: 84 NAGGGDNGAPAKV-QKTESSSQKREKEKEKTSDSKDDFSLGASIQPTA-----DPVRNKS 137
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVM--FEKLRPMGVAEKRKHRS 207
R+ L+KAL D ++ + + + +AA +E + F + K RS
Sbjct: 138 RELLQKAL------LVDKDKFSPQFVSL----MAAKIEEAIYNFHGNSSSDTKYRNKIRS 187
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
N+ D KNPDLR V+ G ++P++LA+M PEE+AS + ++ ++ + + ++ +
Sbjct: 188 RYSNLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEAINDHQMAQN 247
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TD F C C C+Y Q+QTRSADEPMTT+V C C RWK
Sbjct: 248 EGTQTDMFSCGKCKSKKCTYTQLQTRSADEPMTTFVYCMACGNRWK 293
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 75/311 (24%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A P+T LL ST+VG S+ L+K E+V A L+ WK+ + +
Sbjct: 28 DLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIGLAKSLIKSWKKLLDV------ 81
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
S AK + P+ + + D RK
Sbjct: 82 ----------------------------SNAKTRDPGRDTPLPTSSTKNASEAMDHSRKR 113
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVER-----VMFEKLRPMGVAEKRKHRS 207
L+ L R++S T R+ P + R ++ L+ + K + RS
Sbjct: 114 LD--LPRMSS--------TPRITTFPPVPITCDAVRNKCREMLTTALQTDHMKYKNRVRS 163
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
+ N+ D KNP+LRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++
Sbjct: 164 RISNLKDAKNPELRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMART 223
Query: 268 KKGTTDQFKCSGCGKSNCSYHQ-------------------------MQTRSADEPMTTY 302
TD F C C K NC+Y Q +QTRS+DEPMTT+
Sbjct: 224 GGTQTDLFTCGKCRKKNCTYTQASGPWSISSGCPHLCLARSHPYTCKVQTRSSDEPMTTF 283
Query: 303 VTCAECNKRWK 313
V C EC RWK
Sbjct: 284 VVCNECGNRWK 294
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 157/334 (47%), Gaps = 57/334 (17%)
Query: 29 VQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGK 88
++ + L L+ + D+L T++G ++ K E ++N + EL+ WK + K
Sbjct: 39 IEVIKNDLILLKDVEINKDILKQTKIGVTVNKFTKINNESIKNISKELVDKWKNIAIKEK 98
Query: 89 ETNGNKRN----------GSKLSVDEKF----------------------QKQTSDSNAV 116
TN + N S +V+EK K+ + N+
Sbjct: 99 NTNKDLENIKKRKHNETENSNNNVNEKGPELKKKGTSNSLNNSNSTHINEDKENNGKNST 158
Query: 117 KSGCSTAKEKKATASI-----RKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEIT 171
KS + E + + +K ++ + D++RDK ++ L KA + + +
Sbjct: 159 KSYAYNSNENRKINIVDIEEMQKWNYNGKYHDALRDKAKQFLFKAF--ITGSHDNLLHLI 216
Query: 172 DRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH---RSIMFNMSDEKNPDLRRRVLIGE 228
DR K + + ++E +++ ++K + +SI FN+SD+KNP+ ++
Sbjct: 217 DRNKLDN---IIYNIENELYKIFIEKKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEY 273
Query: 229 VTPERLATMTPEELASDERRQENEEIKAKFMFKCE---------VPEKKKGTTDQFKCSG 279
++ LATM +++ASDE++ E ++ + + C+ + +++KG +F+C
Sbjct: 274 ISARTLATMNSQDMASDEKKNERQKCLQESLLACQSDWDVKNILLKKERKG---EFQCFK 330
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C + Y Q+QTRS+DEPMTT+VTC +CN RWK
Sbjct: 331 CKGYDTVYQQLQTRSSDEPMTTFVTCLKCNNRWK 364
>gi|401825902|ref|XP_003887045.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
gi|392998203|gb|AFM98064.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
Length = 253
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 81/145 (55%), Gaps = 21/145 (14%)
Query: 169 EITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+IT + R+P +A + RS N+ D+ NP L RRV GE
Sbjct: 128 QITTEIFGRNPSDIAKLI-------------------RSKCLNLKDKNNPVLCRRVYDGE 168
Query: 229 VTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYH 288
++P R MT EE+ S+ R E ++ +++C++P +K TD FKC+ CG+ CSY
Sbjct: 169 ISPSRYVDMTSEEMKSESLRNEEVKMIEVSLYECQIP-TQKAETDMFKCNKCGERKCSYR 227
Query: 289 QMQTRSADEPMTTYVTCAECNKRWK 313
Q+QTRS DEPMTT+VTC EC +W+
Sbjct: 228 QLQTRSGDEPMTTFVTC-ECGNKWR 251
>gi|400603045|gb|EJP70643.1| transcription elongation factor S-II [Beauveria bassiana ARSEF
2860]
Length = 309
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 146/302 (48%), Gaps = 7/302 (2%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAA 73
KA + A N + R D+LK A P T ++L ST+ G + L+ + +++ +A
Sbjct: 11 KALTKSVAANEAPENALRLLDSLKE-DAAP-TEEMLRSTRAGVFVGKLRSNSNKEIARSA 68
Query: 74 SELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIR 133
+EL++ WK+ L ++ +K SKL + + A + T ++A+ +
Sbjct: 69 AELVNKWKK---LVEQEKNSKLQRSKLGSPASGAASSPPAPAAAAILPTMSTTTSSAAGK 125
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASV--ERVMF 191
K + + + D + + R + + R A + +A SV E F
Sbjct: 126 KFTGDPETRKYDADGVDTKRTDSAVRNSCIGLIYNGLAYRSTASESDVLAKSVAVEAAAF 185
Query: 192 EKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQEN 251
+ G K+K RS+ N+ ++ N L + V+ E+ PER MT ++L SD++R++
Sbjct: 186 AHFKGQGADYKKKIRSLFTNLKNKSNRALGQSVMASEIPPERFVAMTDDDLKSDDQRKKE 245
Query: 252 EEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKR 311
E++ + M K +VP +K +D +C C K SY Q QTRSADEPMTT+ C C R
Sbjct: 246 IELEKENMKKAQVPMAEKSISDSLECGKCKKKQVSYTQAQTRSADEPMTTFCECMNCGNR 305
Query: 312 WK 313
WK
Sbjct: 306 WK 307
>gi|367043846|ref|XP_003652303.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
gi|346999565|gb|AEO65967.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
K R +M ++ + NP+L RRVL GE+TPE+ MT +ELAS+ +R + E++ + M K +
Sbjct: 182 KIRGLMTSLKRKDNPELGRRVLGGEITPEKFVVMTDDELASEAQRARDRELERENMLKAQ 241
Query: 264 VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
VP +K +D +C+ C + SY Q QTRSADEPMTT+ C C RWK
Sbjct: 242 VPMAQKSISDSLQCNKCKQKKVSYSQAQTRSADEPMTTFCECTVCGHRWK 291
>gi|303388862|ref|XP_003072664.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
gi|303301806|gb|ADM11304.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
Length = 256
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 94/178 (52%), Gaps = 23/178 (12%)
Query: 136 SHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLR 195
S D++ D + ++ +R A+ A ++IT + R P +A V
Sbjct: 100 SQKDRSIKMFFDAFKTNISDCCNRSAALLA--KQITVEIFGRSPSDIAKLV--------- 148
Query: 196 PMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
RS N+ D+ NP L RRV G+++P R MT EE+ S+ + E ++
Sbjct: 149 ----------RSKCLNLKDKNNPVLCRRVYDGDISPSRYVDMTSEEMKSENLKNEEVKMI 198
Query: 256 AKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+++C++P +K TD FKCS CG+ CSY Q+QTRS DEPMTT+VTC EC +W+
Sbjct: 199 EDSLYECQIP-TQKAETDMFKCSKCGERKCSYRQLQTRSGDEPMTTFVTC-ECGNKWR 254
>gi|340517178|gb|EGR47423.1| predicted protein [Trichoderma reesei QM6a]
Length = 309
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A +VE + G K+K RS+ N+ ++ N DL +RV+ G++ PER +MT E+L
Sbjct: 177 AVAVENAAYTVFNGEGAEYKKKIRSLFANLKNKSNRDLGKRVMSGDIAPERFVSMTDEDL 236
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
S+++R+ E++ + M K +VP +K +D +C C K SY Q QTRSADEPMTT+
Sbjct: 237 KSEDQRRMELELEKENMKKAQVPMAEKSISDSLECGKCKKKRVSYTQAQTRSADEPMTTF 296
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 297 CECMNCGNRWK 307
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 81/126 (64%)
Query: 188 RVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDER 247
R++ +L+ + + + RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE
Sbjct: 84 RLLAGELKGTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 143
Query: 248 RQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAE 307
R+ + + + + ++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C E
Sbjct: 144 RELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNE 203
Query: 308 CNKRWK 313
C RWK
Sbjct: 204 CGNRWK 209
>gi|47215864|emb|CAG02327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 124
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%)
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
++++ + + K + RS + N+ D KNP+LRR VL G ++P+R+A+M+ EE+AS E +Q
Sbjct: 1 IYQEFKSTEMKYKTRLRSRISNLKDHKNPELRRNVLCGNISPQRIASMSAEEMASAELKQ 60
Query: 250 ENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECN 309
E + + + + ++ + TD F C+ C NC+Y Q+Q RSADEPMTT+V C C
Sbjct: 61 IREALTKESIREHQLSKVGGAETDMFICNNCHGKNCTYTQVQIRSADEPMTTFVLCNSCG 120
Query: 310 KRWK 313
RWK
Sbjct: 121 NRWK 124
>gi|358390984|gb|EHK40389.1| hypothetical protein TRIATDRAFT_302747 [Trichoderma atroviride IMI
206040]
Length = 305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 26/291 (8%)
Query: 34 DALKHLQAF----PVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKE 89
+ALK L+ T ++L +T+ G + L+ +P +++ AASEL+ WK+ + K
Sbjct: 28 NALKLLETLKKDASPTEEMLRATRAGVFVGKLRSNPNKEIARAASELVIKWKKLVEQEKN 87
Query: 90 TNGNK-RNGSKLSVDEKFQKQTSDSNAVKSGCSTA------KEKKATASIRKPSHADQAK 142
+ K + GS + S + + G A K K T + + +
Sbjct: 88 SKLQKAKMGSPSAPAAASPPNPSSNASSAGGAKKAFKGDPEKRKFDTDGV----SIKRTE 143
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
++R++ + L+ + E+ D V AR A +VE F L+ K
Sbjct: 144 SNVRNQCIGLIYNGLAYRSIESETD------VIAR-----AVAVEHAAFTTLKGETPEYK 192
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+K RS+ N+ ++ N DL ++V+ G+++PE+ MT EEL S+++R+ E++ + M K
Sbjct: 193 KKIRSLFTNLKNKSNRDLGKQVMAGDISPEKFVNMTDEELKSEDQRKMELELEKENMKKA 252
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+VP +K +D +C C K SY Q QTRSADEPMTT+ C C RWK
Sbjct: 253 QVPMAEKSISDSLECGKCKKKRVSYTQAQTRSADEPMTTFCECMNCGNRWK 303
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 72/112 (64%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP LR + G V+ ++LA MTPEE+ASDE ++ E+ + +
Sbjct: 211 KNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAIND 270
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 271 AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 322
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 157/335 (46%), Gaps = 58/335 (17%)
Query: 29 VQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGK 88
++ + L L+ + D+L T++G ++ K E ++N + EL+ WK + K
Sbjct: 39 IEVIKNDLILLKDVEINKDILKQTKIGVTVNKFTKINNESIKNISKELVDKWKNIAIKEK 98
Query: 89 ETNGNKRN----------GSKLSVDEKF----------------------QKQTSDSNAV 116
+N N N S +V+EK K+ + N
Sbjct: 99 NSNRNSENIKKRKHSETENSNNNVNEKEPELKKKSTSCSLNNNNSTHINEDKENNGKNNT 158
Query: 117 KSGCSTAKEKKATA-----SIRKPSHADQAK-DSMRDKIRKDLEKALSRVASEAADDEEI 170
KS + E + I+K +++ + D +RDK ++ L KA +A + I
Sbjct: 159 KSYAYNSNENRKINIVDIEEIQKWNYSGKYHHDVLRDKAKQFLFKAF--IAGSHDNLLHI 216
Query: 171 TDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH---RSIMFNMSDEKNPDLRRRVLIG 227
D+ K + + ++E +F+ ++K + +SI FN+SD+KNP+ ++
Sbjct: 217 IDQNKLDN---IIYNIENELFKIFIERKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAE 273
Query: 228 EVTPERLATMTPEELASDERRQENEEIKAKFMFKCE---------VPEKKKGTTDQFKCS 278
++ LATM +++ASDE++ E ++ + + C+ + +++KG +F+C
Sbjct: 274 YISARTLATMNSQDMASDEKKNERQKCLQESLLACQSDWDVKNILLKKERKG---EFQCF 330
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C + Y Q+QTRS+DEPMTT+VTC +CN RWK
Sbjct: 331 KCKGYDTVYQQLQTRSSDEPMTTFVTCLKCNNRWK 365
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
R+ N+ ++KNP+LR R+L G++TP MTP E+A + ++E E++ + +F +
Sbjct: 200 RTFTMNLRNKKNPELRARLLSGQITPSSFIKMTPNEMAPEALKKEIEKLHKQNLFDAQGA 259
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K+ TD+F C C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 260 TEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 307
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 72/112 (64%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP LR + G V+ ++LA MTPEE+ASDE ++ E+ + +
Sbjct: 211 KNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAIND 270
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 271 AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 322
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ D +NP LRR VL G ++ E +A MT EE+ASDE R+ + + + + ++
Sbjct: 8 RSRISNLKDPRNPGLRRNVLSGAISAELIAKMTAEEMASDELRELRNAMTQEAIREHQMA 67
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 68 KTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 115
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D++RDK R+ L +ALS+VASEA ++ RV A DP ++A SVE VMFEKL A+K
Sbjct: 39 DALRDKFREILYEALSKVASEAEGED--LARVNACDPVRIAVSVETVMFEKLGRSNGAQK 96
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
K+RSIMFN+ D NPDLRRRVL+G++ PE+L MT EE+A
Sbjct: 97 FKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 77/124 (62%)
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
++ + + + K + RS + N+ D KNP LR + G V+ ++LA MTPEE+ASDE ++
Sbjct: 194 IYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKK 253
Query: 250 ENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECN 309
E+ + + ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC
Sbjct: 254 LREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECG 313
Query: 310 KRWK 313
RWK
Sbjct: 314 NRWK 317
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 176 ARDPKQVAAS-----VERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVT 230
AR P+ V A + + + K + RS + N+ D KNP LR + G VT
Sbjct: 2 ARCPRDVGAGGNGRRTGGCHYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVT 61
Query: 231 PERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQM 290
++LA MTPEE+ASDE ++ E+ + + ++ + TD KC+ C K NC+Y+Q+
Sbjct: 62 AKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQL 121
Query: 291 QTRSADEPMTTYVTCAECNKRWK 313
QTRSADEPMTT+V C EC RWK
Sbjct: 122 QTRSADEPMTTFVMCNECGNRWK 144
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 120/263 (45%), Gaps = 5/263 (1%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T DLL ST++G + LK+H V +SE++ W+ ++ K T G S+ S D
Sbjct: 106 TEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQKVTVGGSPAASQRSSDS 165
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
KQT + A + A + S P D + I K+
Sbjct: 166 P--KQTPNGTASPASTGAAATDRLAKSTVPPDKRSWKTDQL--TITHTQNKSRDSCIGLI 221
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRR 223
D + R Q A VE + P + R K RS+ N+ ++ NPDLR R
Sbjct: 222 YDGLCLHSTEPPRVVLQKAIQVESAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVR 281
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
VL E+TP++ MT +EL SD +R+E I + M K V + ++ + +C CG+
Sbjct: 282 VLSNEITPDKFVRMTHDELKSDAQREEERRIHKENMDKAMVAKAERSISTSLQCGKCGQK 341
Query: 284 NCSYHQMQTRSADEPMTTYVTCA 306
+Y + QTRSADEPMT + TC
Sbjct: 342 KVTYTEAQTRSADEPMTLFCTCV 364
>gi|365986008|ref|XP_003669836.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
gi|343768605|emb|CCD24593.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
Length = 308
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 139/289 (48%), Gaps = 42/289 (14%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T LL T+VG + KK E++ +++ WK I N NK KL + +
Sbjct: 40 TEKLLRETKVGVEVNKFKKSSNEQIAKVVKKMISSWKDTI------NKNK----KLRLQQ 89
Query: 105 KFQKQTSDSNAVKSGCSTA------------KEKKATASIRKPSHADQAKDS-----MRD 147
+ + + + N+ ++G +T K+ + ++ + S D + +RD
Sbjct: 90 QKEAEAAKLNSNQNGSNTTTQVPDSNLSSPQKQNRYVSTKPRNSKNDGVNTTIYGVKLRD 149
Query: 148 KIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK---RK 204
+ + L AL++ + + I VK S+E MF KL EK K
Sbjct: 150 SVIRALYDALAKGSEHPPNS--ILHTVK---------SIESEMF-KLNNCTENEKAYKEK 197
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
+R I N+ + N DL+ ++ +++PE L T P+ELA + +Q+ EEIK + +F +
Sbjct: 198 YRIIYSNIISKNNADLKNKIANNDISPEYLVTCDPKELAPEHLKQKLEEIKKQNLFNAQG 257
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 258 ATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 306
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 27/272 (9%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T +L T+VG ++ L+ H +V +++ WK + S ++
Sbjct: 36 TEKVLRETKVGVTVNRLRSHANPEVGTLVKKIIKTWKDGV----------------SQEK 79
Query: 105 KFQKQTSDSNAVKSGCSTA-KEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE 163
K + +S + KS ST E+ + R P + + +K R A+ +
Sbjct: 80 KKKAVSSAGSPAKSTTSTTTNERFVSKGPRTPKNDGVKVEIYENKTRNGSISAIYTALAM 139
Query: 164 AADDE--EITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLR 221
+D++ +I + VK + KQ +V + + R K RS++ N+ ++ NP LR
Sbjct: 140 DSDEQPSKIFELVKDIE-KQCFKAVNFTVDDTYR-------NKLRSLIMNLKNKNNPTLR 191
Query: 222 RRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCG 281
R +L E+ P +L TM+ +ELA D ++E EEI K +F + + TD+F+C C
Sbjct: 192 RSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNLFDAQGATENNSVTDRFECGKCK 251
Query: 282 KSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ SY Q QTRSADEP+TT+ C C RWK
Sbjct: 252 QRKVSYFQKQTRSADEPLTTFCKCENCGNRWK 283
>gi|330796078|ref|XP_003286096.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
gi|325083915|gb|EGC37355.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
Length = 310
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 152/318 (47%), Gaps = 54/318 (16%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKI 84
++ E+ + + LK F + ++L ST +GK++ L+ H + +S L+ WK+ I
Sbjct: 16 NQSELDKVLEYLKKANDFEINKEVLKSTDIGKTVGKLRTHKDIGISKQSSILIDKWKKDI 75
Query: 85 VLGKET-----NGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAK-------------EK 126
K T K S S F++++SD+ V++ + AK EK
Sbjct: 76 --EKSTPISTPTSTKPASSAASPSSSFKRKSSDT--VQTTTTVAKQEIEERPSKRVFEEK 131
Query: 127 KATAS--------IRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARD 178
K + + I+ A Q R+K+ + L ++L+R EI + + +
Sbjct: 132 KISTTTFKCTITPIKTGGDAGQ-----RNKMIQLLAESLTR---------EIDETLSS-- 175
Query: 179 PKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
P+ VA VE ++ + + K K RS FN+ + N LR +L +T E+ +M
Sbjct: 176 PEDVATEVEAELYSIYKGLTADYKNKVRSFKFNL--QSNDGLRDSLLNRILTIEKFCSMD 233
Query: 239 PEELASDERRQENEEIKAKFMFKCE---VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSA 295
+ASDE ++E ++ F+ E + + TTDQF+C C + C+Y QMQTRSA
Sbjct: 234 VMSMASDELKEERRKLDK---FQTEASMIGTNNEATTDQFQCGKCKQRRCTYFQMQTRSA 290
Query: 296 DEPMTTYVTCAECNKRWK 313
DEPMTT+V C C RWK
Sbjct: 291 DEPMTTFVRCINCGNRWK 308
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 25/271 (9%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T +L T+VG ++ L+ H +V +++ WK +G + K +V
Sbjct: 80 TEKVLRETKVGVTVNRLRSHANPEVGTLVKKIIKTWK---------DGVSQEKKKKAV-- 128
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
++ S A + +T E+ + R P + + +K R A+ +
Sbjct: 129 ----SSAGSPAKSTTSTTTNERFVSKGPRTPKNDGVKVEIYENKTRNGSISAIYTALAMD 184
Query: 165 ADDE--EITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
+D++ +I + VK + KQ +V + + R K RS++ N+ ++ NP LRR
Sbjct: 185 SDEQPSKIFELVKDIE-KQCFKAVNFTVDDTYR-------NKLRSLIMNLKNKNNPTLRR 236
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
+L E+ P +L TM+ +ELA D ++E EEI K +F + + TD+F+C C +
Sbjct: 237 SILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNLFDAQGATENNSVTDRFECGKCKQ 296
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
SY Q QTRSADEP+TT+ C C RWK
Sbjct: 297 RKVSYFQKQTRSADEPLTTFCKCENCGNRWK 327
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 14/181 (7%)
Query: 135 PSHADQAKDSMRDKIRKDLEKAL--SRVASEAADDEEITDRVKARDPKQVAASVERVMFE 192
P H D +R K R+ L+ AL + S A + E + A +E +++
Sbjct: 147 PVHTLTTNDQVRLKAREMLQSALESGNIPSGAYESEFL------------AIRIESSIYD 194
Query: 193 KLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENE 252
K++ R+ + N+ D NP+LR VL+G V+P++LA+MT EE+AS E ++ E
Sbjct: 195 LFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEEMASKEMKELRE 254
Query: 253 EIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+ + + ++ TD +C C ++ C+Y+Q+QTRSADEPMTT+V C C RW
Sbjct: 255 KYTKETIEDHQMAVTGGTETDLLRCGKCKQTKCTYNQVQTRSADEPMTTFVYCNNCGHRW 314
Query: 313 K 313
K
Sbjct: 315 K 315
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 134/287 (46%), Gaps = 38/287 (13%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T LL T+VG + KK ++ ++ WK I NK +KL +
Sbjct: 38 TEKLLRETKVGVEVNKFKKSENAEISKLVKRMIGAWKDAI--------NKHKKAKLRQQQ 89
Query: 105 KFQKQTS----------DSNAVKSGCSTAKEKKATASIRKPSHADQA-----KDSMRDKI 149
Q+ S +++ KSG K K +S + + D + +RD++
Sbjct: 90 PPQQGVSASSGGAADGSNNDGAKSGDEPRKTDKFVSSKIRNTKNDGVDPNVHNNKLRDQV 149
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR---KHR 206
+ L AL A D E + Q + ++E M KL + EK K+R
Sbjct: 150 IRALYDAL------AKDSEHPPKSIL-----QTSIAIEEEM-HKLNDSSIKEKEYKDKYR 197
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
I N+ NPDL+ ++ G+++PE+L P++LA + +++ EEIK + +F +
Sbjct: 198 VIYSNIISRNNPDLKVKIANGDLSPEQLVNSDPKDLAPEHLKKKMEEIKKQNLFNAQGAT 257
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 258 IERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 304
>gi|19074096|ref|NP_584702.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|19068738|emb|CAD25206.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|449329004|gb|AGE95279.1| transcription elongation factor sII [Encephalitozoon cuniculi]
Length = 257
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 27/193 (13%)
Query: 121 STAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPK 180
S+A E+ AT S D++ D I+ ++ + AS A +IT + R+P
Sbjct: 90 SSALEEVATGD----SQKDRSIKMFFDAIKTNISDCNN--ASAALLARQITIEIFGRNPS 143
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
+A + RS N+ D+ NP L RRV G+++P R M+ E
Sbjct: 144 DIAKLI-------------------RSKCLNLKDKNNPALCRRVYNGDISPSRYVDMSSE 184
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ S+ + E ++ +++C++P +K TD FKCS CG+ CSY Q+QTRS DEPMT
Sbjct: 185 EMKSESLKNEEVKMIEVSLYECQIP-TQKAETDIFKCSKCGERKCSYRQLQTRSGDEPMT 243
Query: 301 TYVTCAECNKRWK 313
T+VTC EC +W+
Sbjct: 244 TFVTC-ECGNKWR 255
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 31/296 (10%)
Query: 36 LKHLQAFPV-TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIW---------KQKIV 85
LK LQA V T DLL S++ G ++ L+ H V N A E++ W K+K
Sbjct: 29 LKKLQAEVVPTEDLLRSSKAGVAIGKLRTHTTPSVSNLAKEIVKKWRDAVEESKKKRKRA 88
Query: 86 LGKETNGNKR-----NGSKLSVDEKFQKQTSDSNAVKSGCST-----AKEKKATAS-IRK 134
G E K+ NG ++ + + S+AV ST + KAT+ R+
Sbjct: 89 EGDEGKDVKKEKEEGNGKRVKAESIHVYFAAGSSAVTPSASTPASVSTPDVKATSPPARQ 148
Query: 135 P-SHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDR--VKARDPKQVAASVERVM- 190
P S D ++ + R + +L +SE + + D+ V D + ++ ER +
Sbjct: 149 PLSTIDSSRTTPRTAKSDGMTDSLKADSSEGGSVDSVRDKCVVMIYDALALDSTAERAIG 208
Query: 191 FEKLR------PMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
E+ G + K RS+ N+ D+ NP LR +++G ++ E++A+M+ +E+AS
Sbjct: 209 IERAANKSMNFSTGNDYRAKMRSLFLNLKDKGNPALRNEIVLGYISTEKVASMSKDEMAS 268
Query: 245 DERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
+ R E+I + +FK + + TD FKC C + C+Y+QMQTRSADEPMT
Sbjct: 269 ESVRMLKEKIASDNLFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPMT 324
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 74/112 (66%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP LRR+VL G +TP+++A MT EE+ASDE ++ + + + + +
Sbjct: 4 KNRVRSRISNLKDAKNPGLRRQVLCGSITPQQIAVMTSEEMASDELKEIRKAMTKEAIRE 63
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD F C C K NC+Y Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 64 HQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 115
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP+ +AA +E ++ +L+ V K + RS + N+ D KNP LR + L+G + E++A M
Sbjct: 28 DPEDMAAQLEEAIYVELKCCQVKYKNRIRSRLANLRDPKNPGLREKFLLGLIGVEKMARM 87
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
TPEE+ASD+ +Q ++ + K ++ + + TD FKC C K NC Q+ TR DE
Sbjct: 88 TPEEMASDDLKQMRQKFVQDSINKAQMAKFQGTKTDLFKCDRCHKRNCI--QLHTRDGDE 145
Query: 298 PMTTYVTCAECNKRWK 313
PM T+V C EC RWK
Sbjct: 146 PMVTFVMCDECGNRWK 161
>gi|209876019|ref|XP_002139452.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
gi|209555058|gb|EEA05103.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
Length = 322
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 35/300 (11%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKH----PCEKVQNAASELLHIWKQKIVL-GKET 90
L+ L + LL ST++G + +K++ + + A L+ WK + L GKE
Sbjct: 35 LEKLSLVNINRQLLKSTKIGVLMTTVKRNYQSINIMDIADMADNLIRKWKNSLALEGKER 94
Query: 91 NGNKRNGSKLS-------VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKD 143
+ + + S +DE + +T + + S ++ K K S P +
Sbjct: 95 SQSSQKSDSESLPKKVAKIDESYGLRTPEKEDI-SETASIKVKNVHNSYTGPLTGE---- 149
Query: 144 SMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVMF-EKLRPMGV 199
+RDK R+ L KA V E+ D P QV +A VE ++ E + G
Sbjct: 150 PLRDKARQFLWKAF--VMGVPVSQAELMD------PSQVCEISAEVESALYKEYIIKQGN 201
Query: 200 AEKRKH---RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKA 256
+ + + ++I +N+ D KNP+L ++ IG++TP+ +ATM E+AS+ +++E E+ K
Sbjct: 202 SVRDYNLQLKTIKWNLGDLKNPELNSKLYIGKITPDEIATMHSREMASEAKQKEREKHKQ 261
Query: 257 KFMFKCEVPEKKKGTTD---QFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + C+ + QF C C + +Y QMQTRSADEPMTT+V C C RWK
Sbjct: 262 ESLEACQSDWDLRNLVQKEGQFTCGKCRTNKTTYFQMQTRSADEPMTTFVRCLNCGNRWK 321
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 159/327 (48%), Gaps = 56/327 (17%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L ++ ++ LL +T++G ++ ++KH +K V A L+ WKQ + + G
Sbjct: 28 DLLKKLGSYQMSIRLLQTTKIGVAVNGVRKHCSDKEVVAMAKVLIKNWKQLL----DCPG 83
Query: 93 NKRNGSKLSVDEK-----------FQKQTSDSNAVKSGCSTAKEKK--------ATASIR 133
+ + G + ++ + + S+ + G K++K AT+S++
Sbjct: 84 SPKKGKAKERRKVKKKVKVLDCSAWKPEAALSSPRRKGREEPKKRKESVDSKSSATSSLK 143
Query: 134 KPS--HADQAKDSMR-------------------------DKIRKDLEKALSRVASEAAD 166
+PS ++ +K + D IR + LS VA +A D
Sbjct: 144 RPSTKRSNSSKSKAKTPKTPSGPSMLAPSPCLLSPRYLTGDCIRDKCVEMLS-VALKAED 202
Query: 167 DEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLI 226
D + + ++A+ +E ++ +L+ + + + RS + N+ D KNP LRR VL
Sbjct: 203 DY----KDYGVNCDKMASEIEDHIYRELKSTDMKYRNRVRSRISNLKDPKNPGLRRNVLS 258
Query: 227 GEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCS 286
G ++ +A M EE+ASDE ++ + + + + ++ + TD +CS C K NC+
Sbjct: 259 GAISTGLIAKMMAEEMASDELKELRNAMTQEAIREHQMAKTSGTNTDLLQCSKCKKKNCT 318
Query: 287 YHQMQTRSADEPMTTYVTCAECNKRWK 313
Y+Q+QT SADEPMTT+V C EC RWK
Sbjct: 319 YNQVQTLSADEPMTTFVLCNECGHRWK 345
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 14/181 (7%)
Query: 139 DQAKDSMRDKIRKDLEKA-----LSRVASEAADDEEITDRVKARDPKQVAASV-ERVMFE 192
D+ + D I + LE + LSR A+ +R D Q A S+ +R
Sbjct: 101 DKMASEIEDHILEPLETSSSPASLSRPAN--------VERSLRPDTAQCARSLAQRRYSR 152
Query: 193 KLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENE 252
+L + + + RS + N+ D +NP LRR+VL G + +A MT EE+ASDE R+
Sbjct: 153 ELSSTDMKYRNRVRSRISNLKDPRNPGLRRKVLSGAIAAGLIAKMTAEEMASDELRELRN 212
Query: 253 EIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+ + + + ++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT+V C EC RW
Sbjct: 213 AMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 272
Query: 313 K 313
K
Sbjct: 273 K 273
>gi|115385046|ref|XP_001209070.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196762|gb|EAU38462.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 305
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 135/315 (42%), Gaps = 36/315 (11%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA A ++EP A LK LQ T DLL ST+VG + K+H +V
Sbjct: 11 KAKALTKAATQNEPAANIVA-LLKELQKGVKATEDLLRSTRVGIIVNKFKQHKAPEVARL 69
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI 132
+SE++ W+ E N K GS + N + A T+ +
Sbjct: 70 SSEIVSKWRN------EVNKQKATGSPSASQRSSGSPRPQPNGTTASSPAATPSDKTSKL 123
Query: 133 RKPSH----------ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
P +Q + +RD + L ++EA P+ V
Sbjct: 124 SVPPDKRSWKADGIDVNQTANRIRDSCIGLMYDGLCLHSTEA--------------PRAV 169
Query: 183 AASVERVMFEKLRPMGVAEKRKHR----SIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
A V G K ++R S+ N+ ++ NP LR RVL EVTPE M+
Sbjct: 170 LAKASAVEAAAYAAYGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSSEVTPEHFVKMS 229
Query: 239 PEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEP 298
+EL S E+R+++ +I+ + M K V + ++ + +C CG+ +Y + QTRSADEP
Sbjct: 230 HDELRSAEQREQDAKIQKQNMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEP 289
Query: 299 MTTYVTCAECNKRWK 313
MT + TC C K WK
Sbjct: 290 MTLFCTCMNCGKSWK 304
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D++R K R+ L AL RV E + + P+++ +E +F + + + K
Sbjct: 152 DAVRLKCREMLANAL-RVDGEPPEG--------CQTPEELGEELEEAIFVEFKNTDMRYK 202
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D KNP LR + G +T +RLA MT EE+ASDE + + + +
Sbjct: 203 NRVRSRVANLKDPKNPSLRANFVSGAITAQRLAKMTSEEMASDEMKHLRDRFVKEAINDA 262
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 263 QLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGHRWK 313
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K K+R + N+ + NPDL+ R+ G+V+PE L P+ELA + +++NEEI + +
Sbjct: 178 AYKDKYRVVYANVISKNNPDLKHRITGGDVSPEYLVNCDPKELAPEHLKKKNEEIARQNL 237
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F + ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 238 FNAQGATLERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRWK 291
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 58/324 (17%)
Query: 39 LQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS 98
L+ + D+L T++G ++ K E ++N + EL+ WK + K +N N N
Sbjct: 49 LKDVEINKDILKQTKIGVTVNKFTKINNESIKNISKELVDKWKTIAIKEKNSNKNLENIK 108
Query: 99 KLSVDE-------------KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK--- 142
K DE + +K+ + +N + + + E K +I S+A +
Sbjct: 109 KRKHDEAENANDNVNEKGPELKKKIAPTN-LDNNSTHINEDKENNTIITKSYAQNSNENK 167
Query: 143 ---------------------DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQ 181
D +RDK ++ L KA + + + DR K +
Sbjct: 168 KINIVNIEEMQHWNYSGKIHHDVLRDKAKQFLFKAF--IVGSHDNLLHLIDRNKLDN--- 222
Query: 182 VAASVERVMFEKLRPMGVAEKRKH---RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
+ ++E +++ ++K + +SI FN+SD+KNP+ ++ ++ LATM
Sbjct: 223 IIYNIENELYKIFIEKKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMN 282
Query: 239 PEELASDERRQENEEIKAKFMFKCE---------VPEKKKGTTDQFKCSGCGKSNCSYHQ 289
+++ASDE++ E ++ + + C+ + +++KG +F+C C + Y Q
Sbjct: 283 SQDMASDEKKNERQKCLQESLLACQSDWDVKNILLKKERKG---EFQCFKCKGYDTVYQQ 339
Query: 290 MQTRSADEPMTTYVTCAECNKRWK 313
+QTRS+DEPMTT+VTC +CN RWK
Sbjct: 340 LQTRSSDEPMTTFVTCLKCNNRWK 363
>gi|396081166|gb|AFN82784.1| transcription elongation factor S-II [Encephalitozoon romaleae
SJ-2008]
Length = 252
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS N+ D+ NP L R V GE++P R MT EE+ S+ R E ++ +++C++P
Sbjct: 145 RSKCLNLKDKNNPVLCRMVYDGEISPSRYVDMTSEEMKSESLRNEEVKMIEVSLYECQIP 204
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K TD FKC+ CG+ CSY Q+QTRS DEPMTT+VTC EC +W+
Sbjct: 205 -TQKAETDMFKCNRCGERKCSYRQLQTRSGDEPMTTFVTC-ECGNKWR 250
>gi|328876868|gb|EGG25231.1| RNA polymerase II elongation factor [Dictyostelium fasciculatum]
Length = 325
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 24/309 (7%)
Query: 26 EPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIV 85
E + LK + ++ DLL +T +GKS+ L+ H V + L+ WK ++
Sbjct: 18 ENSIDEIVALLKAIGLLNISKDLLKTTLIGKSVGLLRTHKNSAVSKESGVLVDKWKDQLQ 77
Query: 86 LGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEK-----KATASIRKPSHADQ 140
+ K+ + + + K +K T+ S + S ++ K T RK D+
Sbjct: 78 IPKKISEPTSPVVEYTTTNKLKKSTTSSTSTTSNNLSSSSSSTTPDKPTTPKRKTFDEDE 137
Query: 141 AKDSMRDK---IRKDLEKALSRVAS--EAADDEEIT-----------DRVKARDPKQVAA 184
+D + +K + ++ S AD T D + Q A
Sbjct: 138 YEDQGKQNNGGTKKQVIHSIVNTTSLPHLADATRSTTLKLFAEGLKMDEITELHYNQAAV 197
Query: 185 SVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
+E +FE K K RSI+FN+ + N L++ +L +T R TM E+A+
Sbjct: 198 EIESQLFETYGGANSDYKVKARSIIFNL--KSNHLLKKNILSKTLTVTRFCTMDATEMAN 255
Query: 245 DERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVT 304
E ++E E + K+ + ++ TTDQF+C C + C+Y Q+QTRSADEP+TT+VT
Sbjct: 256 KELKEERERM-LKYSREAATLSREAATTDQFQCGKCKQRKCTYFQLQTRSADEPLTTFVT 314
Query: 305 CAECNKRWK 313
C CN RWK
Sbjct: 315 CVNCNNRWK 323
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
+ K R+ N+ ++KNPDLR R+L ++ P MTP E+A + ++E E++ + +F
Sbjct: 177 RNKLRTFTMNLRNKKNPDLRDRLLTNKIKPSNFIKMTPNEMAPESLKKEIEKLHKQNLFD 236
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ +K+ TD+F C C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 237 AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 288
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP+ +AA +E ++ +L+ V K + RS + N+ D KNP LR + L+G ++ E+LA M
Sbjct: 28 DPEDMAAQLEEAIYVELKSCQVKYKNRIRSRLANLRDPKNPALREKFLLGLISVEQLARM 87
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
TPEE+ASD+ +Q ++ + + ++ E + TD FKC C K NC Q+ TR DE
Sbjct: 88 TPEEMASDDLKQMRQKFVQESINAAQMAEFQGTKTDLFKCDRCQKRNCI--QLHTRDGDE 145
Query: 298 PMTTYVTCAECNKRWK 313
M T+V C EC RWK
Sbjct: 146 SMITFVMCDECGNRWK 161
>gi|440635961|gb|ELR05880.1| transcription elongation factor S-II [Geomyces destructans
20631-21]
Length = 301
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 140/303 (46%), Gaps = 27/303 (8%)
Query: 20 AATNRSEPEVQRCADALKHLQAFPV-TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLH 78
AA N +P + L L+A V T D+L ST+ G + + +P + V ASE++
Sbjct: 15 AAINEKQP-ADNVINILTKLKAEVVPTEDILRSTKAGMIVAKQRANPDKAVARLASEIVS 73
Query: 79 IWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHA 138
WK + K K G+K + + S A + + E K ++
Sbjct: 74 KWKTIVEAEKR---RKVGGAKPGTASPSKNVDASSPAPPQPATDSDEWKGADPAKRKWQE 130
Query: 139 DQA---KDSM--RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVM 190
D + M RD L L+ ++ + P +V A VE+
Sbjct: 131 DGVDIKRTGMPTRDNCVGLLYNGLAFMSKTS--------------PTKVILKAMEVEKAA 176
Query: 191 FEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQE 250
F K + + K RS+ N+ +++N +L RVL GE+ ++ MT +EL S ER++E
Sbjct: 177 FTKYKGDTPEYRAKMRSLFQNLKNKQNKELGPRVLSGEIPADKFVIMTHDELKSAERKKE 236
Query: 251 NEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNK 310
++E++ M + +VP ++ +D KC CG+ SY Q QTRSADEPMTT+ C C
Sbjct: 237 DDELQKDNMKRAQVPMAERSISDALKCGRCGQKKVSYSQAQTRSADEPMTTFCECTVCGN 296
Query: 311 RWK 313
RWK
Sbjct: 297 RWK 299
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 2/101 (1%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D++RDK R+ L +ALS+V SEA ++ RV A DP ++A SVE VMFEKL A+K
Sbjct: 39 DALRDKFREILYEALSKVVSEAEGED--LARVNACDPVRIAVSVETVMFEKLGRSNGAQK 96
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
K+RSIMFN+ D NPDLRRRVL+G++ PE+L MT EE+A
Sbjct: 97 FKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|171687673|ref|XP_001908777.1| hypothetical protein [Podospora anserina S mat+]
gi|170943798|emb|CAP69450.1| unnamed protein product [Podospora anserina S mat+]
Length = 295
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A VE F + ++K R +M ++ + NP L +RV G +TP+ MT
Sbjct: 161 RLAMEVEAAAFRVFKGDTPEYRQKIRGLMTSLKRKDNPALGKRVRSGAITPDTFVKMTDV 220
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
ELASD +R E+E+++ + M K +VP +K +D KC CG+ SY Q QTRSADEPMT
Sbjct: 221 ELASDAQRAEDEKLQQENMKKAQVPMAEKSISDALKCGKCGQKKVSYSQAQTRSADEPMT 280
Query: 301 TYVTCAECNKRWK 313
T+ C C RWK
Sbjct: 281 TFCECTVCGNRWK 293
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 1/133 (0%)
Query: 182 VAASVERVMFE-KLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
+A+ +E +F+ + + + + K RS N+ ++KNP+LR RVL ++T + MTP
Sbjct: 166 IASEIESEVFKSEYSKVNDSYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMTPN 225
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+A + ++E E++ + +F + +K+ TD+F C C SY+QMQTRSADEP+T
Sbjct: 226 EMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLT 285
Query: 301 TYVTCAECNKRWK 313
T+ TC C RWK
Sbjct: 286 TFCTCENCGNRWK 298
>gi|238589160|ref|XP_002391938.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
gi|215457296|gb|EEB92868.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
Length = 125
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 69/108 (63%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS+ N+ D+ NP LR V+ G + ++LA M+ E+AS+ER+ +++IK + F
Sbjct: 16 RSLFVNLKDKNNPGLRESVVSGLIAADKLAKMSSAEMASEERQAADQKIKQENFFASLGA 75
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E+++ TD F+C C + C Y Q QTRSADEPMTT+VTC C RWK
Sbjct: 76 EEQQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTNCGNRWK 123
>gi|261203309|ref|XP_002628868.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239586653|gb|EEQ69296.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239608307|gb|EEQ85294.1| transcription elongation factor S-II [Ajellomyces dermatitidis
ER-3]
Length = 303
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 130/278 (46%), Gaps = 24/278 (8%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T DLL ST++G + LK+H V +SE++ W+ ++ K G S+ S D
Sbjct: 40 TEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQKAAAGGSPAASRRSSDS 99
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASI---RKPSHADQ-----AKDSMRDKIRKDLEKA 156
Q N + TA +K A +++ ++ ADQ ++ RD +
Sbjct: 100 PKQ----IPNGIAPPAPTASDKLAKSTVPPDKRSWKADQLTITHTQNKSRDSCIGLIYDG 155
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDE 215
L ++E R Q A VE + L P + R K RS+ N+ ++
Sbjct: 156 LCLNSTEPP-----------RIVLQKAIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNK 204
Query: 216 KNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQF 275
NP LR RVL EVT E+ MT +EL SD +R+E I + M K V + ++ +
Sbjct: 205 SNPGLRVRVLSNEVTAEKFVRMTHDELKSDAQREEERRIHKENMDKAMVAKAERSVSTSL 264
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 265 QCGKCGQRKVTYTEAQTRSADEPMTLFCTCTVCGKSWR 302
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 167 DEEITDRVKA--RDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
DEE+T K+ + K++ + ++++R + K + RS + D KNP+LR+ V
Sbjct: 132 DEEVTSLAKSLIKSWKKLLVPI----YQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNV 187
Query: 225 LIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSN 284
L G + P+ A MT EE+ASDE ++ + + + + + ++ + TD F C C K N
Sbjct: 188 LCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKN 247
Query: 285 CSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 248 CTYTQVQTRSADEPMTTFVVCNECGNRWK 276
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 72/112 (64%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 4 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 63
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 64 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 115
>gi|259482276|tpe|CBF76603.1| TPA: transcription elongation factor S-II (AFU_orthologue;
AFUA_3G07670) [Aspergillus nidulans FGSC A4]
Length = 304
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 132/305 (43%), Gaps = 17/305 (5%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA A ++EP LK LQ + DLL ST+VG + K+H +V
Sbjct: 11 KAKALTKAATQNEPPAN-IVSLLKELQQGVKASEDLLRSTRVGIIVNKFKQHKAPEVARL 69
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI 132
+SE++ W+ E N K +GS + N S S K +
Sbjct: 70 SSEIVSKWRN------EVNKQKASGSASASQRSSASPRPPQNGTASPASATPSDKMSKLA 123
Query: 133 RKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFE 192
P D + I + +A D + A PK V + V
Sbjct: 124 VPPDKRTWKADGI--DINQTGNRARDNCIGLMYDGLCLHS---AEPPKAVLSKAAAVEAA 178
Query: 193 KLRPMGVAEKRKH----RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERR 248
G K + RS+ N+ ++ NP LR RVL EVTPER MT EEL SDE+R
Sbjct: 179 AYDAYGPETKEPYRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQR 238
Query: 249 QENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAEC 308
+++ +I+ + M K V + ++ + +C CG+ +Y + QTRSADEPMT + TC C
Sbjct: 239 EKDRKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMHC 298
Query: 309 NKRWK 313
K W+
Sbjct: 299 GKSWR 303
>gi|320582848|gb|EFW97065.1| General transcription elongation factor TFIIS [Ogataea
parapolymorpha DL-1]
Length = 294
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 71/112 (63%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
+ K RS++ N+ ++ NP+LR R+L E+ + TMT +ELA + ++E ++ K +F
Sbjct: 181 RNKMRSLIMNLRNKNNPELRARLLSREIKSSKFVTMTNQELAPEALKKELADLHQKNLFD 240
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ +K+ TD+F C C K SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 241 AQGAVQKRAITDRFVCGKCNKREVSYYQMQTRSADEPLTTFCTCESCGNRWK 292
>gi|399215957|emb|CCF72645.1| unnamed protein product [Babesia microti strain RI]
Length = 300
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 46/295 (15%)
Query: 29 VQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGK 88
+ + L + VT ++L T+VG S++ + K + A ++ WK+ +
Sbjct: 41 IDSISSTLSSIANLEVTREILTETKVGVSVQKIAKEKIYPISEQAENVIAGWKKAL---- 96
Query: 89 ETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDK 148
N++N + +S EK + + +A+I S D R+K
Sbjct: 97 ---DNQKNRNIVSPPEKI-----------------RHVEQSATINDYS-GPLTNDPSRNK 135
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH--- 205
L KA + + + + +++V + ++ ++E+ +FE EKR +
Sbjct: 136 ALSILYKAFLKGFPQ--NSPQPSNKVAS----ELIYNLEQHVFESFH-----EKRLYAQQ 184
Query: 206 -RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
+SI FN+ D N L + +GE+TP++LATM P+++AS++ +++ E + + M C+
Sbjct: 185 IKSIRFNLQDNNNTQLNYNLHVGEITPQQLATMAPQDMASEKLKRKREMVLKESMLACQS 244
Query: 265 PEKKKG------TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K T QF C C +S Y Q+QTRS+DEPMTT+VTC C RWK
Sbjct: 245 DWAVKNILLSSKTPGQFTCFKCKQSKTVYTQVQTRSSDEPMTTFVTCLVCQNRWK 299
>gi|85119699|ref|XP_965694.1| hypothetical protein NCU02563 [Neurospora crassa OR74A]
gi|28927506|gb|EAA36458.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567143|emb|CAE76438.1| related to transcription elongation factor TFIIS [Neurospora
crassa]
gi|336464865|gb|EGO53105.1| hypothetical protein NEUTE1DRAFT_73389 [Neurospora tetrasperma FGSC
2508]
Length = 298
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A VE +F+ + + K R++ ++ + N L RRV+ GE+ ERL ++ +EL
Sbjct: 166 AVEVENALFKACKGENQEYRSKGRTLFTSLKRKDNAALGRRVMSGELPVERLVVLSDKEL 225
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
AS+E+R +EE++ + M K +VP +K +D KC CG+ SY Q QTRSADEPMTT+
Sbjct: 226 ASEEQRARDEELEKENMKKAQVPMAEKSISDALKCGKCGQRKVSYSQAQTRSADEPMTTF 285
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 286 CECTVCGNRWK 296
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 95/181 (52%), Gaps = 21/181 (11%)
Query: 137 HADQAKDS----MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFE 192
H ++ +DS + D + KD E S V A D E K++ A + V E
Sbjct: 144 HHNKLRDSVVRALYDALAKDSEHPPSSVLQTAVDIE-----------KEMNALYDHVTSE 192
Query: 193 KLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENE 252
K K K+R + N+ NPDL+ ++ G++TP+ + P+ELA + RQ+ E
Sbjct: 193 K------QYKEKYRIVYSNIISRNNPDLKFKITNGDLTPQFVVQCDPKELAPEHLRQKIE 246
Query: 253 EIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
EI + +F + ++ TD+F+C C + SY+Q+QTRSADEP+TT+ TC C RW
Sbjct: 247 EITKQNLFNAQGATIERSVTDRFQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
Query: 313 K 313
K
Sbjct: 307 K 307
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D MRDK R L KA+ V ++ +K ++AA +E V+ + G
Sbjct: 159 DVMRDKARHFLWKAM--VTGVPYSQAKL---MKESQVCEIAAEIESVLHREYIVKGDNSV 213
Query: 203 RKH----RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
R + ++I +N+SD KNP+L ++ +G++TPE +A M E+ASD +++E E+ K +
Sbjct: 214 RDYNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASDAKQKEREKHKQES 273
Query: 259 MFKCEVPEKKKGTTD---QFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ C+ + QF C C + +Y+QMQTRSADEPMTT+V C C RWK
Sbjct: 274 LEACQSDWDLRNLIQKEGQFTCGKCKTNKTTYYQMQTRSADEPMTTFVRCLNCGNRWK 331
>gi|350296969|gb|EGZ77946.1| transcription elongation factor [Neurospora tetrasperma FGSC 2509]
Length = 298
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A VE +F+ + + K R++ ++ + N L RRV+ GE+ ERL ++ +EL
Sbjct: 166 AIEVENALFKACKGENQEYRSKGRTLFTSLKRKDNAALGRRVMSGELPVERLVVLSDKEL 225
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
AS+E+R +EE++ + M K +VP +K +D KC CG+ SY Q QTRSADEPMTT+
Sbjct: 226 ASEEQRARDEELEKENMKKAQVPMAEKSISDALKCGKCGQRKVSYSQAQTRSADEPMTTF 285
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 286 CECTVCGNRWK 296
>gi|408389619|gb|EKJ69057.1| hypothetical protein FPSE_10756 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 80/131 (61%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A +VE F K + K+K RS+ N+ ++ N +L + VL GE++PE+ M+ +EL
Sbjct: 176 AITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSDDEL 235
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
S+E+R++ E++ + M +VP+++K ++ +C C K SY Q QTR+ADEPMTT+
Sbjct: 236 KSEEQRKKELELEKENMKMAQVPQEQKSISESLECGKCKKKQVSYTQAQTRAADEPMTTF 295
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 296 CECMACGNRWK 306
>gi|46108040|ref|XP_381078.1| hypothetical protein FG00902.1 [Gibberella zeae PH-1]
Length = 307
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 80/131 (61%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A +VE F K + K+K RS+ N+ ++ N +L + VL GE++PE+ M+ +EL
Sbjct: 175 AITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSDDEL 234
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
S+E+R++ E++ + M +VP+++K ++ +C C K SY Q QTR+ADEPMTT+
Sbjct: 235 KSEEQRKKELELEKENMKMAQVPQEQKSISESLECGKCKKKQVSYTQAQTRAADEPMTTF 294
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 295 CECMACGNRWK 305
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS N+ ++KNP+LR R+L ++ P MTP E+A + ++E E++ + +F +
Sbjct: 196 RSFTMNLRNKKNPELRERILSKQILPAAFIKMTPNEMAPEALKKEIEKLHKQNLFDAQGA 255
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K+ TD+F C C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 256 TEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 303
>gi|327349505|gb|EGE78362.1| transcription elongation factor S-II [Ajellomyces dermatitidis ATCC
18188]
Length = 373
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 129/278 (46%), Gaps = 24/278 (8%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T DLL ST++G + LK+H V +SE++ W+ ++ K G S+ S D
Sbjct: 110 TEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQKAAAGGSPAASRRSSDS 169
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASI---RKPSHADQ-----AKDSMRDKIRKDLEKA 156
Q N + TA +K A ++ ++ ADQ ++ RD +
Sbjct: 170 PKQI----PNGIAPPAPTASDKLAKFTVPPDKRSWKADQLTITHTQNKSRDSCIGLIYDG 225
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDE 215
L ++E R Q A VE + L P + R K RS+ N+ ++
Sbjct: 226 LCLNSTEPP-----------RIVLQKAIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNK 274
Query: 216 KNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQF 275
NP LR RVL EVT E+ MT +EL SD +R+E I + M K V + ++ +
Sbjct: 275 SNPGLRVRVLSNEVTAEKFVRMTHDELKSDAQREEERRIHKENMDKAMVAKAERSVSTSL 334
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 335 QCGKCGQRKVTYTEAQTRSADEPMTLFCTCTVCGKSWR 372
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL ADD+ V ++A+ +E + ++L+ + +
Sbjct: 187 DSVRDKCVEMLSAALK------ADDDYKDYGVNC---DKMASEIEDHIHQELKSTDMKYR 237
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 238 NRVRSRISNLKDPRNPGLRRNVLSGAISTGLIAKMTAEEMASDELRELRNAMTQEAIREH 297
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+C C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 298 QMAKTGGTTTDLFQCKKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 348
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP AA +E ++ +L V K + RS + N+ D KNP LR + L+G +TP+ L+ M
Sbjct: 7 DPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRM 66
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
TPEE+ASD+ +Q ++ + ++ + T+QFKC C K NC+ Q+ R DE
Sbjct: 67 TPEEMASDDLKQMRQQYVQDSINAAQLGNVEGTKTNQFKCERCQKRNCT--QLHIRDGDE 124
Query: 298 PMTTYVTCAECNKRWK 313
P+ T+V C +C RWK
Sbjct: 125 PIITFVMCDDCGNRWK 140
>gi|320588310|gb|EFX00779.1| transcription elongation factor s 2 [Grosmannia clavigera kw1407]
Length = 332
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 150/324 (46%), Gaps = 32/324 (9%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAA 73
KA + A A+N + + LK +A T D+L ST+ G ++ L+ H +V++ A
Sbjct: 15 KALNKAIASNEPAHSILAIMETLK--KAVAPTEDVLRSTRAGHTVGKLRAHANHEVKSMA 72
Query: 74 SELLHIWKQKIVLGKETNG----NKR----NGSKLSVDEKFQKQTSDSNAVKSGCSTAKE 125
+E++ WK+ + L K+ +G +KR N S + + + TS A + AK
Sbjct: 73 TEIVTKWKKAVELEKKRSGGAAASKRASPANHSSSTGTPQRRGTTSPGPAGPDARAEAKS 132
Query: 126 KKATASIRKPSHADQAK---DSMRDKIRKDLEKALSRVASEAADD-------------EE 169
A ++ S A D + K D ++R ++ D+ E
Sbjct: 133 TAAAPAVAASSGTATASFQGDPDKRKFETDGVD-VNRTGVQSRDNCIGLLYNGLAFRSTE 191
Query: 170 ITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEV 229
+ +RV A+ A VE+ F + + K RS+ N+ + NP L RRV+ GE+
Sbjct: 192 LPERVLAK-----AIEVEKAAFVVYKGETAEYRAKLRSLFQNLKNRSNPALGRRVVAGEI 246
Query: 230 TPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQ 289
+ M+ +EL S +Q +++ + M K +VP +K +D C C + SY Q
Sbjct: 247 AADAFVVMSSDELKSAHLKQLESDLQKENMKKAQVPMTEKSISDALTCGKCKQRKVSYTQ 306
Query: 290 MQTRSADEPMTTYVTCAECNKRWK 313
QTRSADEPMTT+ C C RWK
Sbjct: 307 AQTRSADEPMTTFCECTVCGHRWK 330
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 8/171 (4%)
Query: 139 DQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMG 198
D + + R+ D+ L +++AA ++ +D+ + + A +ER F+ L+
Sbjct: 137 DSTRTTPRNSKTDDMVSRLRSDSTDAASEDLTSDK---KTIAERAIGIEREAFKLLKFNS 193
Query: 199 VAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
E R K RS+ N+ D+ NP LR +++G+VTP+++ M+ EE+AS+ R NE++ K
Sbjct: 194 GNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEEMASESVRLLNEKLAEK 253
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAEC 308
+FK + + TD FKCS C + C+Y+QMQTRSADEPM TC C
Sbjct: 254 NLFKAKAVGVTQAETDAFKCSRCQQRKCTYYQMQTRSADEPM----TCGGC 300
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
+ K RS N+ ++KNP+LR R+L ++ P M+P E+A + ++E E++ + +F
Sbjct: 190 RNKLRSFTMNLRNKKNPELRERILSKQILPAEFIKMSPNEMAPEALKKEIEKLHKQNLFD 249
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ +K+ TD+F C C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 250 AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 301
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 48 LLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQ 107
+L T+VG ++ + H ++ N +++ W+ + EK
Sbjct: 39 VLRETKVGVAVNKFRSHENSEISNLVKKMIRNWRDAVQ-----------------HEKIS 81
Query: 108 KQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMR----DKIRKDLEKALSRVASE 163
K+ ++ S +T ++ ++ A + R D + +L +R AS
Sbjct: 82 KKKVSGSSTPSTPATPATPSSSTNLNSIDGAKKIPTGPRNPKTDGVSTELYDNPTRNASV 141
Query: 164 AADDEEITDRVKARDPKQ----VAASVERVMFE-KLRPMGVAEKRKHRSIMFNMSDEKNP 218
+A + V+ DP + +A+ +E +F+ + + + + K RS N+ ++KNP
Sbjct: 142 SALYTSLA--VERGDPSELILKIASEIESEVFKSEYSKVTDSYRNKLRSFTMNLRNKKNP 199
Query: 219 DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+LR R+L + MTP E+A + ++E E++ + +F + +K+ TD+F C
Sbjct: 200 ELRERLLTQAILAANFIKMTPSEMAPESLKKEIEKLNKQNLFDAQGATEKRAVTDRFTCG 259
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 260 KCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 294
>gi|154320754|ref|XP_001559693.1| transcription elongation factor S-II [Botryotinia fuckeliana
B05.10]
gi|347838992|emb|CCD53564.1| similar to transcription elongation factor s-ii [Botryotinia
fuckeliana]
Length = 301
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A +VE+ F+ K K RS+ N+ N LR+RV+ G++ P R MT EEL
Sbjct: 169 AMAVEQAAFDHFGGETKEYKEKLRSLFQNLKQVSNTQLRKRVMSGDIDPARFVVMTHEEL 228
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
S+E +++++ ++ + M K +VP +K +D C CG+ SY Q QTRSADEPMTT+
Sbjct: 229 KSEEMKKKDDALELENMKKAQVPMAEKSISDALTCGKCGQKKVSYSQAQTRSADEPMTTF 288
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 289 CECQVCGHRWK 299
>gi|336262956|ref|XP_003346260.1| DST1 protein [Sordaria macrospora k-hell]
gi|380093589|emb|CCC08553.1| putative DST1 protein [Sordaria macrospora k-hell]
Length = 298
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 78/131 (59%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A VE +F+ + + K R++ ++ + N L RRV+ GE+ +RL ++ +EL
Sbjct: 166 AVEVENALFKACKGENQEYRSKARTLFTSLKRKDNAALGRRVMSGELPVDRLVVLSDKEL 225
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
AS+E+R +EE++ + M K +VP +K +D KC CG+ SY Q QTRSADEPMTT+
Sbjct: 226 ASEEQRARDEELEKENMKKAQVPMAEKSISDALKCGKCGQRKVSYSQAQTRSADEPMTTF 285
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 286 CECTVCGNRWK 296
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
+F + + G+ K + RS N+ D +NP+LRRR++ GE+TP+++ATM+ +E+ASDE ++
Sbjct: 1 IFCEFKNTGIKYKNRVRSRAANLKDPRNPELRRRLIQGEITPQQMATMSAQEMASDEVKK 60
Query: 250 ENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT-YVTCAEC 308
++ + + + +VP TD FKC CG+ NC Y+Q + SAD P+ + +V C +C
Sbjct: 61 FRRQVSEESIQRRQVPHADGTMTDMFKCENCGRENCCYNQYRGFSADGPIASPFVFCMDC 120
Query: 309 NKRWK 313
RWK
Sbjct: 121 GNRWK 125
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Query: 183 AASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
A +ER F+ L+ E R K RS+ N+ D+ NP LR +++G+VTP+++ M+ EE
Sbjct: 185 AIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 244
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+AS+ R NE++ K +FK + + TD FKCS C + C+Y+QMQTRSADEPMT
Sbjct: 245 MASESVRLLNEKLAEKNLFKAKAVGVTQAETDAFKCSRCQQRKCTYYQMQTRSADEPMTV 304
Query: 302 Y 302
+
Sbjct: 305 H 305
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 32/282 (11%)
Query: 48 LLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKR--------NGSK 99
LL T+VG + KK ++ +++ WK I K+ ++ N +
Sbjct: 40 LLRETKVGVEVNKFKKSTNVEIAKLVKKMISSWKDAINRNKKLKQQQQPAKEMDTTNANG 99
Query: 100 LSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK-----DSMRDKIRKDLE 154
+S D+ ++ TS S+A S S K+ K T++ + S D D +RD + K L
Sbjct: 100 VSTDK--ERTTSPSDATVS--SPKKQTKFTSTKPRNSKNDGVNTVVYNDKLRDSVVKALY 155
Query: 155 KALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE---KRKHRSIMFN 211
AL++ + I VK S+E M+ KL + E K K+R I N
Sbjct: 156 DALAKESEHPP--ASILHTVK---------SIENEMY-KLNNPSINERQYKEKYRIIYSN 203
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ + NPDL+ ++ ++TP+ L P+ELA + +++ EEIK + +F + ++
Sbjct: 204 IISKNNPDLKNKITNNDITPDYLVNCDPKELAPEHLKKKLEEIKKQNLFNAQGATIERSV 263
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 264 TDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 305
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 182 VAASVERVMFEKLRPM--GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
+A +E+ M++ P K K+R I N+ + NPDL+ ++ G+++P+ L P
Sbjct: 171 IAIDIEKHMYKLKIPAENDKGYKDKYRVIYSNVISKNNPDLKHKITNGDISPDYLVNCDP 230
Query: 240 EELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPM 299
+ELA + +++ EEI + +F + ++ TD+F+C C + SY+Q+QTRSADEP+
Sbjct: 231 KELAPEHLKKKLEEIAKQNLFNAQGATLERSVTDRFQCGKCKEKKVSYYQLQTRSADEPL 290
Query: 300 TTYVTCAECNKRWK 313
TT+ TC C RWK
Sbjct: 291 TTFCTCEACGNRWK 304
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 72/112 (64%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D +NP LR++VL G + PE++A MT EE+ASD ++ E+ + + +
Sbjct: 25 KTRVRSRVANLKDVRNPILRQQVLCGSIPPEKIANMTAEEMASDRLKELRRELTKEAIRE 84
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ T KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 85 AQMSTTGGTKTSLLKCGKCKKRNCTYNQVQTRSADEPMTTFVFCNECGNRWK 136
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
+ K RS N+ ++KNP+LR R+L ++T MTP+E+A + + E E++ + +F
Sbjct: 199 RNKLRSFTMNLRNKKNPELRERILTKQITAAAFIKMTPKEMAPEALKLEIEKLHKQNLFD 258
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ +K+ TD+F C C SY+QMQTRSADEP+TT+ TC C RWK
Sbjct: 259 AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 310
>gi|225683287|gb|EEH21571.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb03]
gi|226288233|gb|EEH43745.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb18]
Length = 306
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 128/280 (45%), Gaps = 6/280 (2%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST++G + LK+H V +SE++ W+ ++ K
Sbjct: 30 LKELQKGVQPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQKAAASGS 89
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLE 154
+ S+ S + +QT++ + + S A K S P D + I
Sbjct: 90 PSASQRSSNSP--RQTTNGTSSPASTSAAASDKMAKSSVPPDKRSWKTDQV--IITHTQN 145
Query: 155 KALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMS 213
K+ D + R Q A VE + P + R K RS+ N+
Sbjct: 146 KSRDSCTGLIYDGLCLNSTEPPRVVLQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLK 205
Query: 214 DEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTD 273
++ NP LR RVL EVT ER MT +EL SD +R+E I+ + M K V + ++ +
Sbjct: 206 NKSNPGLRIRVLSNEVTAERFVRMTHDELKSDAQREEERRIQKENMDKAMVAKAERSIST 265
Query: 274 QFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 266 SLQCGKCGQKKVTYTEAQTRSADEPMTLFCTCVVCGKSWR 305
>gi|294883920|ref|XP_002771106.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
gi|239874344|gb|EER02922.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
Length = 308
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 140/307 (45%), Gaps = 38/307 (12%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKK--HPCEKVQNAASELLHIWKQ 82
SEP+ A + L + + LL T +GK+L + + AA L+ WK+
Sbjct: 20 SEPDRDLMA-IIDSLSSINMDKQLLKETMIGKALNKAANADETTPRAKKAAKNLMGAWKK 78
Query: 83 KIVLGKETNGNKRNGSKLSVDEKFQKQ---------TSDSNAVKSGCSTAKEKKATASIR 133
KI + + + +S E + T+D++ CS++ S+
Sbjct: 79 KIDYKPSSGHHHSHPKSVSSAESAMENSSKPVNGQPTADASTTDGSCSSSSGNTDLTSVM 138
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
+ + + D RDKIR L KAL R+P++ +V V E+
Sbjct: 139 EVA---RCGDPKRDKIRNLLFKALR----------------PRRNPEEAEPAVRAVEIEE 179
Query: 194 LRPMGVAEKR---KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQE 250
++E+ + RSI +N++D NPD + +VL+G ++ +T+T E++AS+ + Q
Sbjct: 180 ECHSKLSEREYLSQIRSIKYNLTDSSNPDFQWKVLVGLFPRDKYSTLTSEDMASEAKNQH 239
Query: 251 NEEIKAKFMFKCEVPEKKKGTTDQ----FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCA 306
+ +C+ + Q F+C C KS +Y QMQTRS+DEPMTT+VTC
Sbjct: 240 RANAAKAALEECQSDWAMRHGAIQKSGMFQCGKCRKSQTTYFQMQTRSSDEPMTTFVTCL 299
Query: 307 ECNKRWK 313
C +WK
Sbjct: 300 NCGNKWK 306
>gi|295672377|ref|XP_002796735.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283715|gb|EEH39281.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 306
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 128/280 (45%), Gaps = 6/280 (2%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK LQ T DLL ST++G + LK+H V +SE++ W+ ++ K
Sbjct: 30 LKELQKGVQPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQKAAASGS 89
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLE 154
+ S+ S + +QT++ + + S A K S P D + I
Sbjct: 90 PSASQRSSNSP--RQTTNGTSSPASTSAAASDKMAKSNVPPDKRSWKTDQV--IITHTQN 145
Query: 155 KALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMS 213
K+ D + R Q A VE + P + R K RS+ N+
Sbjct: 146 KSRDSCTGLIYDGLCLNSTEPPRVVLQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLK 205
Query: 214 DEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTD 273
++ NP LR RVL EVT ER MT +EL SD +R+E I+ + M K V + ++ +
Sbjct: 206 NKSNPGLRIRVLSNEVTAERFVRMTHDELKSDAQREEERRIQKENMDKAMVAKAERSIST 265
Query: 274 QFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG+ +Y + QTRSADEPMT + TC C K W+
Sbjct: 266 SLQCGKCGQKKVTYTEAQTRSADEPMTLFCTCVVCGKSWR 305
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 182 VAASVERVMFEKLRPMGV--AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
+A +E+ M++ P A K K+R I N+ + N DL+ ++ G++TPE L P
Sbjct: 169 IAIDIEKHMWQLNDPGENEKAYKDKYRVIYSNVISKNNRDLKHKITNGDITPEYLVNCDP 228
Query: 240 EELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPM 299
+ELA + R++ EEI + +F + ++ TD+F+C C + SY+Q+QTRSADEP+
Sbjct: 229 KELAPEHLRKKLEEIAKQNLFNAQGATLERSVTDRFQCGKCKEKKVSYYQLQTRSADEPL 288
Query: 300 TTYVTCAECNKRWK 313
TT+ TC C RWK
Sbjct: 289 TTFCTCEVCGNRWK 302
>gi|50310967|ref|XP_455506.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644642|emb|CAG98214.1| KLLA0F09361p [Kluyveromyces lactis]
Length = 292
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 71/110 (64%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
K+R I N+ + NPDL+ R+ GEV+ + L T P++LA + +++ EEI+ + +F +
Sbjct: 181 KYRIIYSNIISKNNPDLKHRITNGEVSAKHLVTADPKDLAPEHLKKKIEEIEKQNLFNAQ 240
Query: 264 VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ TD+F+C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 241 GATVERSVTDRFQCGKCKQRKVSYYQLQTRSADEPLTTFCTCENCGNRWK 290
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 77/128 (60%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
D +++ A +E +F++ + K + RS + N+ D KNP+LRR VL G + +R A M
Sbjct: 81 DDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDAKNPNLRRNVLCGNIATDRFARM 140
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
+ EE+ASDE ++ + + + + + ++ TD F C C K NC+Y Q+QTRSADE
Sbjct: 141 SAEEMASDELKEMRKNLTKEAIREHQMARTGGTQTDLFSCGKCKKKNCTYTQVQTRSADE 200
Query: 298 PMTTYVTC 305
PMTT V C
Sbjct: 201 PMTTLVFC 208
>gi|452979563|gb|EME79325.1| hypothetical protein MYCFIDRAFT_57652 [Pseudocercospora fijiensis
CIRAD86]
Length = 312
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 42/299 (14%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKR 95
L L+ F T DLL +++G ++ L+++ KV + A+ L++ WKQ E N K+
Sbjct: 33 LAPLEQFKATEDLLRQSKIGVAVTKLRQNKDPKVASTATSLVNRWKQ------EVNAKKK 86
Query: 96 NGSKLSVDEKFQKQTSDSNAVKSGCSTA---------KEKKA-----------TASIRKP 135
+ K + +N SG ++ KE++A T I
Sbjct: 87 RPDGTASPAPAGKGLNATNGRSSGTNSPAPPSKPEIKKEQRANKVDPEKRNTKTDGIEHE 146
Query: 136 SHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLR 195
D+A RD K + ++ ++ ++ D I D VA VE FE +
Sbjct: 147 VTGDRA----RDGCLKLMYDGIAYMSDKSPD--AIFD---------VARKVEVAAFEHFK 191
Query: 196 PMGVAE-KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEI 254
E K K RS+ N+ + N LR+ V E+ P+R MT +EL S+E R+E+ I
Sbjct: 192 HQTSPEYKAKMRSLYQNLKMKGNARLRKDVYSMEIMPKRFVAMTSDELKSEEMRKEDAVI 251
Query: 255 KAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + M K +++K + F C C ++ +Y Q QTRSADEP+TT+ C C RWK
Sbjct: 252 ERENMNKAMTAQEEKAISTTFVCGKCKQAKVAYSQAQTRSADEPLTTFCECTVCGNRWK 310
>gi|297827973|ref|XP_002881869.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
gi|297327708|gb|EFH58128.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 125/264 (47%), Gaps = 59/264 (22%)
Query: 3 KKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFP--VTYDLLVSTQVGKSLRH 60
++ + LF AA +AA + S PEV R DA+ L+ P + D++ +T +GK LR
Sbjct: 4 QEFLELFDAALRAAKSVKGVKNS-PEVSRFVDAMNRLKEAPESLACDVVCTTSMGKGLRF 62
Query: 61 LKKHPCEKVQNAASELLHIWKQKI-VLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSG 119
K H ++++ L +W + I G+E + ++ K+ +DS K+G
Sbjct: 63 FKDHKNPQIRSEGKLLWDLWTKIIHASGREKSRDRDTPVKIP---------TDSTIKKTG 113
Query: 120 CSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDP 179
DS RDK+R+ L+ +L++VA+E D E T RV A DP
Sbjct: 114 -----------------------DSKRDKVREILQTSLAKVATEVVDTEMKT-RVTACDP 149
Query: 180 KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
VA SVE MFE NPDLRR+VLIGE+ ERL TM
Sbjct: 150 WVVAISVESAMFE----------------------SNNPDLRRKVLIGEINGERLVTMER 187
Query: 240 EELASDERRQENEEIKAKFMFKCE 263
+E+ S++ ++E + IK FK E
Sbjct: 188 QEMGSEKIQKEVQRIKENARFKEE 211
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKR 95
L+ L+ F T DLL +++G ++ L+++ KV +S+L++ WK + +T
Sbjct: 30 LQPLRTFTATEDLLRHSKIGIAVNRLRQNKDPKVAQLSSQLINKWKADVKTKSKTGSPAP 89
Query: 96 NGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATAS-IRKPSHADQAKDSMRDKIRKDLE 154
++ + TS G KE AT++ RK + + D++ DL
Sbjct: 90 AAKGINGVANGRDATSSPAPKTDGVK--KEPSATSNPARKSKVPPEKRTFTADEVNTDLT 147
Query: 155 KALSR------------VASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
+R SE + DE + V AR + A SV A K
Sbjct: 148 GDTTRNGCIGLIYNGLAYMSEESPDEVL---VAARSVEAAAFSVHN------NETSSAYK 198
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
K RS+ N+ + N LRR V G++ P+R TMT +EL + E+R ++ ++ + M
Sbjct: 199 MKMRSLFQNLKMKGNATLRRDVFNGKIEPKRFVTMTSDELKNAEKRAQDAALEKENMKAS 258
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+++K + C+ C +S +Y Q QTRSADEPMTT+ C C RWK
Sbjct: 259 MTAQEEKAISTTMTCNKCKQSRVAYTQAQTRSADEPMTTFCECTNCGNRWK 309
>gi|342878267|gb|EGU79622.1| hypothetical protein FOXB_09905 [Fusarium oxysporum Fo5176]
Length = 315
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 78/131 (59%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A +VE + K + K+K RS+ N+ ++ N +L R VL GE+T E+ MT +EL
Sbjct: 175 AVAVEHAAYTKFKGETPDYKKKIRSLFTNLKNKSNRELGRSVLSGEITAEKFVIMTDDEL 234
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
S+E+R++ E++ + M K +VP +K ++ +C C K SY Q QTR+ADEPMTT+
Sbjct: 235 KSEEQRKKELELEKENMKKAQVPMAEKSISESLECGRCKKKQVSYTQAQTRAADEPMTTF 294
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 295 CECMACGHRWK 305
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 9/185 (4%)
Query: 123 AKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
+K K ++ + PS + D++R K R+ L AL RV E + + P+++
Sbjct: 149 SKSKPSSTPVSIPSQSSNTTDAVRLKCREMLANAL-RVDGEPPEG--------CQTPEEL 199
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
+E +F + + + K + RS + N+ D KNP LR + G +T +RLA MT EE+
Sbjct: 200 GEELEEAIFVEFKNTDMRYKNRIRSRVANLKDPKNPSLRSNFVSGALTAQRLAKMTSEEM 259
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
ASDE + + + + ++ + TD KC C K NC+Y+Q+QTRSADEPMTT+
Sbjct: 260 ASDEMKLLRDRFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTF 319
Query: 303 VTCAE 307
V C E
Sbjct: 320 VMCNE 324
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 136/306 (44%), Gaps = 48/306 (15%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE---KVQNAASELLHIWK 81
S EV L+ L+ + +L +T++G L L K+ E +++N AS L WK
Sbjct: 27 SNDEVHAVLATLRRLETLDIDRSMLQNTRIGVILTKLSKYDVEGIDEIKNLASNLTTRWK 86
Query: 82 QKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQA 141
L ++ +G+ S S +K T + A R H
Sbjct: 87 DS--LRRQASGDNSLESSSSKRKKSDASTD-------------QAAAEPRYRHSYH---- 127
Query: 142 KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
D +RDK L K+L A E + D KA ++A +E +F + +
Sbjct: 128 NDDIRDKAIIYLFKSL------LAGKENVYDHKKA---GRLAYDMEAGLFSRYLYNQNNQ 178
Query: 202 K---RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
K K +SI FN+ D KN ++ G++ P +A M E+AS+E++ E I +
Sbjct: 179 KDYTLKLKSIAFNLKDPKNSTFSDKIYNGDIEPRSVAIMEAAEMASEEKKMERINILQES 238
Query: 259 MFKCEVPE-----------KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAE 307
+ C+ KKKG QFKC C Y+Q+QTRS+DEPMTT+VTC E
Sbjct: 239 LEACQSDWAVKNILLSKEGKKKG---QFKCLKCHSMETVYYQLQTRSSDEPMTTFVTCLE 295
Query: 308 CNKRWK 313
CN RWK
Sbjct: 296 CNNRWK 301
>gi|302927325|ref|XP_003054473.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735414|gb|EEU48760.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 303
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 79/131 (60%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A SVE + + + K+K RS+ N+ ++ N DL RRV+ G+++ +R MT +EL
Sbjct: 171 AVSVEHAAYTRNKGETPEYKKKIRSLFTNLKNKSNKDLGRRVMSGDISADRFVVMTDDEL 230
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
S+++R++ E++ + M K +VP +K ++ +C C K SY Q QTR+ADEPMTT+
Sbjct: 231 KSEDQRKKEVELEKENMKKAQVPMAEKSISEDLQCGRCKKKQVSYTQAQTRAADEPMTTF 290
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 291 CECMACGHRWK 301
>gi|402469030|gb|EJW04098.1| transcription elongation factor S-II [Edhazardia aedis USNM 41457]
Length = 305
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
Query: 172 DRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTP 231
+ +K D +Q A ++++ E +R + ++ S N+S++ NP+L + V G ++P
Sbjct: 164 NHIKECDFEQAAIVAKKIVDELVRTDKIKDRELVASKKLNLSNKANPELCQNVYNGTISP 223
Query: 232 ERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQ 291
ER MT EE+ S++ ++ E++K + ++P+ + TT FKCS C +S +Y+Q+Q
Sbjct: 224 ERYIAMTIEEMKSEDLKKREEKMKQDQLMDSQLPKLQADTT-MFKCSRCKQSKTTYYQLQ 282
Query: 292 TRSADEPMTTYVTCAECNKRWK 313
TRSADEPMT Y+TC C +WK
Sbjct: 283 TRSADEPMTNYITCCVCGHKWK 304
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 99/171 (57%), Gaps = 9/171 (5%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL DD+ V ++A+ +E + +L+ + +
Sbjct: 190 DSVRDKCVEMLSAALK------MDDDYKEYGVNC---DKMASEIEDHILSELKGTDMKYR 240
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP+LRR VL G ++ +A MT EE+ASDE ++ + + + +
Sbjct: 241 NRVRSRISNLKDPRNPNLRRNVLCGAISTSLIARMTAEEMASDELKELRNAMTLEAIREH 300
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++ + TTD F+C C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 301 QMAKTGGTTTDLFQCXKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 351
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 70/114 (61%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K K+R I N+ + NPDL+ ++ G+V+P L P+ELA + R++ EEI + +
Sbjct: 180 AYKDKYRIIYSNIISKNNPDLKHKITSGDVSPFYLVNCDPKELAPEHLRRKLEEIAKQNL 239
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F + ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 240 FNAQGATVERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRWK 293
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 37/291 (12%)
Query: 42 FPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGK-----------ET 90
FP T LL T+VG + KK ++ +++ WK +++ K
Sbjct: 35 FP-TEKLLRETKVGVEVNKFKKSTNVEISKLVKKMISSWKAQLIKNKRCRQPQQHHQDHA 93
Query: 91 NGNKRNGSKL--SVDEKFQKQTSDSNAVKSG--CST----AKEKKATASIRKPSHADQAK 142
GN + + + SV+ Q +S S+A+K ST +K +I DQ
Sbjct: 94 PGNAEDKTTVGESVNGVQQPASSQSDAMKQDKYVSTKPRNSKNDGVDTAIYHHKLRDQVL 153
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
++ D + K+ E + A E ++V D + A K
Sbjct: 154 KALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAAY-----------------K 196
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + ++
Sbjct: 197 ARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNA 256
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 257 QGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 307
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP AA +E ++ +L V K + RS + N+ D KNP LR + L+G +TP+ L+ M
Sbjct: 28 DPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRM 87
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
TPEE+ASD+ +Q ++ + ++ + T+ FKC C K NC+ Q+ R DE
Sbjct: 88 TPEEMASDDLKQMRQQYVQDSINAAQLGNVEGTKTNLFKCERCQKRNCT--QLHIRDGDE 145
Query: 298 PMTTYVTCAECNKRWK 313
P+ T+V C +C RWK
Sbjct: 146 PLITFVMCDDCGNRWK 161
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 146/325 (44%), Gaps = 53/325 (16%)
Query: 36 LKHLQAFPV-TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVL-------- 86
LK LQA V T DLL S++ G ++ L+ H V + A E++ W+ +
Sbjct: 29 LKKLQAEVVPTEDLLRSSKAGVAVGKLRTHATPSVSSLAKEIVKKWRDAVEETKKKRKRA 88
Query: 87 ----GKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK 142
GK+ K G+ V K + + S A +SG T A + PS + A
Sbjct: 89 EGDEGKDVKKEKEEGNGKRV--KAESMCALSPAAESGSDTHIHFAAGSLAATPSASTPAS 146
Query: 143 DSMRD------KIRKDLEKA-LSRVASEAADDEEITDRVKARDPKQVAASVERV------ 189
S D +R+ L SR A + + D ++A + SV+ V
Sbjct: 147 ASTPDVKATSPPVRQPLSTIDSSRTTPRTAKSDGVADSLRADSSE--GGSVDSVRDKCVI 204
Query: 190 -MFEKL-------RPMGVAE--------------KRKHRSIMFNMSDEKNPDLRRRVLIG 227
+++ L R +G+ + K RS+ N+ D+ NP LR +++G
Sbjct: 205 MIYDALALDSTAERAIGIERAANKAMNFSTGNDYRAKMRSLFLNLKDKGNPALRNEIVLG 264
Query: 228 EVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSY 287
V+ E++A+M+ +E+AS+ R E+I + +FK + + TD FKC C + C+Y
Sbjct: 265 YVSTEKVASMSKDEMASESVRMLKEKIASDNLFKAKAVGVTQAETDAFKCGRCHQRKCTY 324
Query: 288 HQMQTRSADEPMTTYVTCAECNKRW 312
+QMQTRSADEPMT A RW
Sbjct: 325 YQMQTRSADEPMTVSRYLAHM-IRW 348
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+ ++ ++L ST+VG S+ ++K E+VQN A L+ WK K++ G E
Sbjct: 28 DLLRELRNMKMSLEMLQSTRVGMSVNAVRKQSSDEEVQNIAKSLIKSWK-KLLDGSEEK- 85
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVK-----SGCSTAKEKKATASIRKPSHADQAKDSMRD 147
K++GS + + S + K SG T + P+ KD++R+
Sbjct: 86 -KKDGSPVRSSSTSKDSGSSRKSTKASDESSGAPTGPGLPPPVAAFPPALV--TKDNVRN 142
Query: 148 KIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRS 207
K R+ L VA+ + +T V D + +AA +E ++++ + K + RS
Sbjct: 143 KCRELL------VAALQTGGDHLTMGV---DCQHLAAQIEEEIYQEFKSTETKYKSRLRS 193
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
+ N+ D+KNP+LRR VL G ++P+R+A+M+ EE+AS E +Q E + + + + ++ +
Sbjct: 194 RISNLKDQKNPELRRNVLCGNISPQRIASMSAEEMASAELKQIREALTKESIREHQLSKV 253
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSAD 296
TD F C+ C +CSY Q++TR+++
Sbjct: 254 GGTETDMFICNNCHGKSCSYTQVETRASE 282
>gi|429855994|gb|ELA30929.1| transcription elongation factor s-ii [Colletotrichum
gloeosporioides Nara gc5]
Length = 300
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 133/273 (48%), Gaps = 20/273 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T ++L +T+ G + L+ + + + AA+EL+H WK K+V ++ K+ S +
Sbjct: 42 TEEMLRATRAGVFVGKLRSNSNKDIARAATELVHKWK-KLVEAEKQGKLKKQSSPAAPSP 100
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIR--KPSHAD--QAKDSMRDKIRKDLEKALSRV 160
T+ + S S+ + K A R K AD + DS+RD + L L+
Sbjct: 101 ----TTASAPKPSSSGSSKEPFKGNAENRRAKEDGADTKRTGDSVRDACIELLYNGLAYR 156
Query: 161 ASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDL 220
++ + D A +VE F + +G K K RS+ N+ + N +L
Sbjct: 157 STASVADV-----------LAKAVAVEAAAFSHFKGVGAPYKEKVRSLFSNLKVKTNKEL 205
Query: 221 RRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGC 280
V+ G++TP+R MT EEL S E+R++ ++ + M K +VP +K +D C C
Sbjct: 206 GVNVMEGKITPDRFVAMTQEELKSAEQRKKENLLQEENMKKAQVPMAEKSISDALTCGKC 265
Query: 281 GKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ SY Q QTRSADEPMTT+ C C RWK
Sbjct: 266 KQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK 298
>gi|367006041|ref|XP_003687752.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
gi|357526057|emb|CCE65318.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 39/283 (13%)
Query: 48 LLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEK-F 106
LL T+VG + KK ++ +++ WK I NK K +K
Sbjct: 41 LLRETKVGIEVNKFKKSTNPEISKLVRKIITNWKDSI--------NKHKKLKTQNSQKDL 92
Query: 107 QKQTSDSNAV----KSGCSTAKEKKATASIRKPSH-----ADQA--KDSMRDKIRKDLEK 155
K++ +NAV +SG S K+ +K + D A D +RD++ K L
Sbjct: 93 SKESQQANAVSLKDESGASNEANKQDKYITKKTRNTINDCVDTAIYNDDLRDRVIKALYD 152
Query: 156 ALSRVASEAADDEEITDRVKARDPKQVAASVERVMFE--KLRPMGVAEK---RKHRSIMF 210
AL++ + P+ + +V+ + + L EK ++R I
Sbjct: 153 ALAKESEHP--------------PQAILNTVKDIELQMHNLHNSETDEKAYRERYRIIYS 198
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ + NPDL+ ++ GEVT E L+ + ++LA + +Q+ +EI + +F + ++
Sbjct: 199 NVISKNNPDLKHKITNGEVTAEFLSKCSSKDLAPEYLKQKMDEISKQNLFNAQGATIERS 258
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 259 VTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 301
>gi|378733301|gb|EHY59760.1| transcription elongation factor S-II [Exophiala dermatitidis
NIH/UT8656]
Length = 306
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 133/275 (48%), Gaps = 20/275 (7%)
Query: 47 DLLVSTQVGKSLRHLKKHPC--EKVQNAASELLHIWK-----QKIVLGKETN-GNKRNGS 98
DLL ST +GK + +K P +V ASE++ W+ QK+ G T G + NG+
Sbjct: 42 DLLRSTGIGKIVNKVKGIPGMDPQVAQLASEIISRWRHIVNEQKLASGTSTPVGARSNGT 101
Query: 99 KLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALS 158
K + + S A +K+ + + P D D+ R+ + L
Sbjct: 102 ----SSPAPKANTPTPKAASPAGVAPDKRNWKADKVP-RDDLTNDTARNNCIGLMYDGLC 156
Query: 159 RVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNP 218
+ S+ ++I D A++ + A ++ P+ K K RS+ N+ ++ NP
Sbjct: 157 -LGSDLPM-KQILDL--AKEIESAALNLPEAKGSSSSPV---YKDKIRSLYQNLKNKSNP 209
Query: 219 DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
LR+R+L GEVT R +MT EE+ S ++R+E +I + M V +++K + +C
Sbjct: 210 GLRKRILSGEVTAVRFVSMTHEEMKSKQQREEEIKIAKENMNNAMVAQEEKSVSTSLECG 269
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C + SY Q QTRSADEPMTT+ C C RWK
Sbjct: 270 KCHQKKVSYSQAQTRSADEPMTTFCECLNCGNRWK 304
>gi|403220912|dbj|BAM39045.1| transcription elongation factor [Theileria orientalis strain
Shintoku]
Length = 319
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 147/321 (45%), Gaps = 50/321 (15%)
Query: 19 AAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLH 78
A T+ + + C +AL+ L+ V ++L +T++G SL L K ++++S++
Sbjct: 22 GAFTDSLKSDFDACLEALESLK---VDREVLQTTRIGTSLTKLSKSLENHCKDSSSKITC 78
Query: 79 I---WKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKP 135
I WK ++ TN KR ++T+D + +T KEK + + P
Sbjct: 79 IIERWKSQLRSVNATNATKR------------QKTADG----ADSTTRKEKASVSESNIP 122
Query: 136 SHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQ-----------VAA 184
S +D +DS +++ DL V SE D+ + + Q +
Sbjct: 123 SFSDTREDSKEEEL--DLPAYSGPVHSEVVRDKALRYLFRCFLVGQDFGPELNKLNALVY 180
Query: 185 SVERVMFEKLRPMGVAEKRKH---RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+E +++ A+K + + I FN D KN +V G + L TM+ +
Sbjct: 181 EIENALYDHYVVNKNAQKEYNLQLKCISFNFKDIKNTFFNYKVYSGAIPVSELVTMSSLQ 240
Query: 242 LASDERRQENEEIKAKFMFKCE---------VPEKKKGTTDQFKCSGCGKSNCSYHQMQT 292
+ASDE++ + I + + C+ + +K KG QFKC C +Y+Q+QT
Sbjct: 241 MASDEKKMQRSVILEQSLEACQSDWAIKNIFLNQKSKG---QFKCGKCNSRQTTYYQLQT 297
Query: 293 RSADEPMTTYVTCAECNKRWK 313
RS+DEPMTT+VTC C RW+
Sbjct: 298 RSSDEPMTTFVTCLNCKNRWR 318
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K K+R I N+ + N DL+ ++ G++TP L P+ELA + R++ EEI+ K +F
Sbjct: 210 KEKYRIIYSNLISKNNSDLKFKITNGDITPVHLVNCDPKELAPEPLRKKIEEIREKNLFN 269
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 270 AQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRWK 321
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 141/283 (49%), Gaps = 25/283 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
+ LK LQ + D+L T++G ++ L+K E+V + L+ WK+ L T
Sbjct: 30 ELLKALQTMAINLDVLTKTRIGMTVNALRKSSKDEEVISLCKTLIKNWKK--FLSTPTTP 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK--DSMRDKIR 150
+K +GS +S + KE++ S Q+ D++R K R
Sbjct: 88 SKDSGS-----------SSKPKKDSNKDKDKKEEREKDKKLPASFPPQSNTTDAVRLKCR 136
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
+ L +AL ++ E + P+++A +E ++ + + + K + RS +
Sbjct: 137 ELLTQAL-KIDGENPN--------ACATPEELAEDLEECIYAEFKNTDMRYKNRVRSRVA 187
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ D KNP LR L G + RLA MTPEE+ASDE ++ E+ + + ++ +
Sbjct: 188 NLKDPKNPTLRTNFLNGVINAARLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGT 247
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
T+ KC C K NC+Y+Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 248 KTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 290
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 71/114 (62%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K ++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + +
Sbjct: 194 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNL 253
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 254 YNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 307
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 71/114 (62%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K ++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + +
Sbjct: 194 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNL 253
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 254 YNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 307
>gi|340914730|gb|EGS18071.1| putative transcription elongation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 303
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 76/133 (57%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
Q A VE FE + + K R +M ++ + N +L RV+ GE+TP + MT +
Sbjct: 169 QKAMEVEAAAFEVYKGDTPEYRSKIRGLMTSLKRKDNAELGDRVMKGEITPHQFVKMTEK 228
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
ELAS+ +R + +++ + M K +VP +K +D +CS C + SY Q QTRSADEPMT
Sbjct: 229 ELASEAQRLRDAQLERENMLKAQVPMAQKSISDSLQCSKCKQKKVSYSQAQTRSADEPMT 288
Query: 301 TYVTCAECNKRWK 313
T+ C C RWK
Sbjct: 289 TFCECTVCGHRWK 301
>gi|452836512|gb|EME38456.1| hypothetical protein DOTSEDRAFT_75850 [Dothistroma septosporum
NZE10]
Length = 313
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 55/306 (17%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE-KVQNAASELLHIWKQKIVL-------- 86
L+H++A T DLL +++G ++ L+++ + KV A+ L++ WKQ++ +
Sbjct: 33 LEHVKA---TEDLLRQSKIGVAVTKLRQYKGDPKVGETATRLVNRWKQEVNVHKKKRPAV 89
Query: 87 -------GKETNGNKRNG-----------SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKA 128
K NG NG SK V ++ +K T D + K
Sbjct: 90 EGSPIPSNKAINGAAANGRSSGTSSPAPPSKTEVKKEGRKSTVDPEKRNTNTDNVNHK-- 147
Query: 129 TASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVER 188
D++RD K + ++ ++ E+ D + D VA VE
Sbjct: 148 -----------VTGDAVRDGCLKLMYDGIAFMSEESPDT--VMD---------VARKVEL 185
Query: 189 VMFEKLRPMGVAE-KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDER 247
FE + + K K RS+ N+ + N LR+ V ++ P R TMT +EL S+E+
Sbjct: 186 AAFEHFKSETNQDYKAKMRSLFQNLKMKNNTLLRKDVFTMKIEPTRFVTMTSDELKSEEK 245
Query: 248 RQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAE 307
R+++EE++ + M + ++K + F C C +S +Y Q QTRSADEP+TT+ C
Sbjct: 246 RKKDEELEKENMRQAMTAVEEKAISTTFTCGKCKQSRVAYSQAQTRSADEPLTTFCECTM 305
Query: 308 CNKRWK 313
C RWK
Sbjct: 306 CGHRWK 311
>gi|328861258|gb|EGG10362.1| hypothetical protein MELLADRAFT_33850 [Melampsora larici-populina
98AG31]
Length = 264
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 131/257 (50%), Gaps = 24/257 (9%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T +L+ +T++G S+ +++P ++ A +++ WK + KE N + + +
Sbjct: 15 TEELIRTTKIGISVGKQRQNPDHEISKLAKLIVNEWKNGV--KKEPNHPTHSSTPTHLAS 72
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
Q Q S + ++G ++K + +S++DK+R K++ +
Sbjct: 73 GSQPQKSFTK--RTGPRSSK-----------TETHLKFESLQDKVRDGSMKSV--FDALI 117
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
D + D V R K + + V R K K RS++FN+ D+ NP LR V
Sbjct: 118 FDSDAPADLVYER-AKSIESEVNRTNDSN------GYKNKMRSLIFNLKDKNNPGLREAV 170
Query: 225 LIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSN 284
+ GE++ +L +M P ++AS+ER+ ++ ++ + +FK ++ TD F+C CG+
Sbjct: 171 VSGEISSMKLCSMGPADMASEERKAQDRKLAEENLFKARGAGPQQAETDAFRCGRCGQRK 230
Query: 285 CSYHQMQTRSADEPMTT 301
C+Y+QMQTRSADEPMT
Sbjct: 231 CTYYQMQTRSADEPMTV 247
>gi|296421697|ref|XP_002840401.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636616|emb|CAZ84592.1| unnamed protein product [Tuber melanosporum]
Length = 110
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%)
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
++F K+ +LR RV+ GE+TP RL+TM E+AS +RRQ +E++ + M + +
Sbjct: 3 VLFLNLKSKDNNLRNRVVSGEITPARLSTMESSEMASAQRRQADEKLMEENMRTAMMAKS 62
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K +DQ C CG+ SY Q QTRSADEPMTT+ TC C+ RWK
Sbjct: 63 EKSISDQLTCGKCGQKKVSYTQAQTRSADEPMTTFCTCEICSHRWK 108
>gi|207345303|gb|EDZ72168.1| YGL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323333438|gb|EGA74832.1| Dst1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 71/114 (62%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K ++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + +
Sbjct: 127 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNL 186
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 187 YNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 240
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 70/112 (62%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K ++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + ++
Sbjct: 196 KARYRIIYSNIISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEISKQNLYN 255
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 256 AQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 307
>gi|452819596|gb|EME26652.1| transcription elongation factor S-II [Galdieria sulphuraria]
Length = 204
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRP----MGVA 200
MRDK+R + L+ T+ K K + +VE + E + G
Sbjct: 42 MRDKVRTLFYQVLT-----------TTEERKQEKQKPIHVTVEEIEEELFKSCDKETGKD 90
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
+ + RS+ N+ D KN LR VL + P+ MTP ELA+ E ++E E+++ + +
Sbjct: 91 YQERFRSLYRNLKDAKNASLREAVLSRTILPKDFVVMTPHELANPELKKEREQLRKESIR 150
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + + +++F+C CG CS+ QMQTRSADEPMTT+VTC C RWK
Sbjct: 151 ESKKSVDTQTFSEEFQCRKCGLRKCSFFQMQTRSADEPMTTFVTCHHCGNRWK 203
>gi|156040461|ref|XP_001587217.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum
1980]
gi|154696303|gb|EDN96041.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A +VE+ F+ K K RS+ N+ N LR+RV+ G++ P R MT EEL
Sbjct: 169 AMAVEQAAFDHFGGETKDYKEKLRSLFQNLKQVSNTQLRKRVMSGDIEPARFVVMTHEEL 228
Query: 243 ASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
S+E +++++ ++ + M K +VP +K +D C C + SY Q QTRSADEPMTT+
Sbjct: 229 KSEEMKKKDDLLEMENMKKAQVPMAEKSISDALTCGKCHQKKVSYSQAQTRSADEPMTTF 288
Query: 303 VTCAECNKRWK 313
C C RWK
Sbjct: 289 CECQVCGHRWK 299
>gi|61679514|pdb|1Y1V|S Chain S, Refined Rna Polymerase Ii-tfiis Complex
gi|61679527|pdb|1Y1Y|S Chain S, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
Length = 179
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 71/114 (62%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K ++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + +
Sbjct: 64 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNL 123
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 124 YNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 177
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 14/180 (7%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDE--EITDRVKARDP-KQVAASVERVMFEKLRPMGV 199
D +RDK ++ L KA +DD + DR K D + + ++ EK +
Sbjct: 232 DVLRDKAKQFLFKAFIT----GSDDNLLYLIDRKKLNDIIYNIENELHKIFIEKKQSQK- 286
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
+ +SI FN+ D+KNP ++ ++P+ +ATM +E+ASDE+++E + + +
Sbjct: 287 EYNMQLKSIKFNLCDKKNPSFNEKIYAEYISPKIIATMNSQEMASDEKKKERNKCLQESL 346
Query: 260 FKCEVPEK------KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C+ KK +F+C C YHQ+QTRS+DEPMTT+VTC +CN RWK
Sbjct: 347 QACQSDWDVKNILLKKNRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNNRWK 406
>gi|4217|emb|CAA24928.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 128
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 71/114 (62%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K ++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + +
Sbjct: 13 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNL 72
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 73 YNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 126
>gi|47200172|emb|CAF87330.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 21/145 (14%)
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE--------- 240
++++++ + K + RS + N+ D KNP LR+ VL G + R+A+M+ E
Sbjct: 111 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEVGAARPDRS 170
Query: 241 ------------ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYH 288
E+ASDE +Q + + + + ++ + TTD +C C K NC+Y+
Sbjct: 171 GAPPFHVCVSTKEMASDELKQLRNTLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYN 230
Query: 289 QMQTRSADEPMTTYVTCAECNKRWK 313
Q+QTRSADEPMTT+V C EC RWK
Sbjct: 231 QVQTRSADEPMTTFVLCNECGNRWK 255
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 85/160 (53%), Gaps = 22/160 (13%)
Query: 176 ARDPKQVAASVERV--MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPER 233
A P Q A + ++++L+ + + + RS + N+ D +NP LRR VL G ++
Sbjct: 289 ALGPPQTAGWPLTLSHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLNGAISAGL 348
Query: 234 LATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQ---- 289
+A MT EE+ASDE R+ + + + + ++ + TTD +CS C K NC+Y+Q
Sbjct: 349 IAKMTAEEMASDELRKLRNAMTQEAIREHQMAKTGGTTTDLLQCSKCKKKNCTYNQVSLL 408
Query: 290 ----------------MQTRSADEPMTTYVTCAECNKRWK 313
MQTRSADEPMTT+V C EC RWK
Sbjct: 409 ASDKTVSHCVLLADCWMQTRSADEPMTTFVLCNECGHRWK 448
>gi|22327517|ref|NP_680377.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|332007413|gb|AED94796.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 233
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 119/265 (44%), Gaps = 54/265 (20%)
Query: 3 KKLVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFP--VTYDLLVSTQVGKSLRH 60
++ + LF AA +AA + S PEV R DA+ L+ P + D++ T +GK L
Sbjct: 4 REFLELFEAALRAAKSVKGAE-SSPEVLRFVDAMNRLKEAPKSLVCDVVCKTSMGKGLGF 62
Query: 61 LKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGC 120
H K+++ L +W + +
Sbjct: 63 FIDHKNPKIRSEGRILRDLWMK---------------------------------IHYAS 89
Query: 121 STAKEKKATASIRKPSHADQAK--DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARD 178
K + ++ P+H+ K DS RDK+ + L+ +L++VA+E D E + D
Sbjct: 90 GREKSRDRETPVKIPTHSTMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCD 149
Query: 179 PKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
P VA SVE M SI+FNM D NPDLRR+VLIGE++ ERL M
Sbjct: 150 PWVVAVSVESAM----------------SILFNMGDSNNPDLRRKVLIGEISGERLVKME 193
Query: 239 PEELASDERRQENEEIKAKFMFKCE 263
+E+ S++ ++E + IK + FK E
Sbjct: 194 KDEMGSEKIQKEVQRIKERARFKEE 218
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 138/268 (51%), Gaps = 30/268 (11%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLG----K 88
D LK L+ P+T +LL ST++G S+ ++K E+V + A L+ WK K++ G K
Sbjct: 5 DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK-KLLDGPSTEK 63
Query: 89 ETNGNKRNGSKLSVD--EKFQKQTSDSNAVKSGCST-AKEKKATASIRKPSHADQAKDSM 145
+ + K+ + S + E ++ TS N T A++ ++ R PS +D S+
Sbjct: 64 DLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD----SV 119
Query: 146 RDKIRKDLEKALSRVASE----AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
R K R+ L AL R + AD+EE+ + +E +++++R +
Sbjct: 120 RLKCREMLAAAL-RTGDDYIAIGADEEEL------------GSQIEEAIYQEIRNTDMKY 166
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K + RS + N+ D KNP+LR+ VL G + P+ A MT EE+ASDE ++ + + + + +
Sbjct: 167 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 226
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQ 289
++ + TD F C C K NC+Y Q
Sbjct: 227 HQMAKTGGTQTDLFTCGKCKKKNCTYTQ 254
>gi|239781978|pdb|3GTM|S Chain S, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
Length = 173
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 70/114 (61%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K ++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + +
Sbjct: 58 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNL 117
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD+F C C + SY+Q+QTRSAD P+TT+ TC C RWK
Sbjct: 118 YNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADHPLTTFCTCEACGNRWK 171
>gi|124511836|ref|XP_001349051.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
gi|23498819|emb|CAD50896.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
Length = 403
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 71/114 (62%), Gaps = 6/114 (5%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
+SI FN+SD+KNP+ +V ++ + LATM +++ASDE++ E ++ + + C+
Sbjct: 289 KSIKFNLSDKKNPNFNEKVYSEFISSKALATMNSQDMASDEKKNERKKCLQESLLACQSD 348
Query: 266 EK------KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
KK +F+C C + YHQ+QTRS+DEPMTT+VTC +CN RWK
Sbjct: 349 WDVKNILLKKSRKGEFQCFKCKGYDTIYHQLQTRSSDEPMTTFVTCLKCNNRWK 402
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 139/312 (44%), Gaps = 36/312 (11%)
Query: 13 KKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
K+A + A + +V D L L V +L+ T++G +++ + KV
Sbjct: 9 KEAREMKAKLEKDGVDVNTVRDILTLLMDKEVPVQVLIETKIGVTVKSKRSDDDRKVAKL 68
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI 132
ASEL WK+ + ++ GS + EK K S A + K K
Sbjct: 69 ASELTSKWKEVVARSRQP------GSSAAGQEKPNK----SAAGEGSNGKEKVKSEDKVT 118
Query: 133 RKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFE 192
+KP+ + D R K+R+ EKA + E+ D K ++A +E M+E
Sbjct: 119 KKPA---EPVDGKRLKVRELFEKAFADWKGESDVDR-----------KDLSARIESAMYE 164
Query: 193 KLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD---ERRQ 249
+S+ FN+SD KNPD R +V+ G++ E + ++ ++A E+++
Sbjct: 165 HFGGANEQYLNHAKSVKFNLSDPKNPDFRSKVIFGDIDAEEIPKLSSGQMAGKDKIEQKK 224
Query: 250 ENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCSYHQMQTRSADEPMT-------T 301
N+E K F K + G +D F+C C + +++Q QTRSADEPMT
Sbjct: 225 ANKEDKI-FQDKMFITAGNLGAESDMFQCRKCKQKRTTFYQKQTRSADEPMTAELPLLQV 283
Query: 302 YVTCAECNKRWK 313
++TC C W+
Sbjct: 284 FITCKNCGHEWR 295
>gi|361130396|gb|EHL02209.1| putative Transcription elongation factor S-II [Glarea lozoyensis
74030]
Length = 411
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 179 PKQVAA---SVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLA 235
P QV A VE+ +E + + K RS+ N+ ++ N +L +VL G++ P +
Sbjct: 161 PTQVIAKAMEVEKAAYESHKGDNSDYRAKLRSLFQNLKNKDNRELGIQVLSGDILPSKFV 220
Query: 236 TMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSA 295
MT +EL S +R +E++++ + M +VP +K +D +C CG+ SY Q QTRSA
Sbjct: 221 VMTHDELKSAKRIEEDKKLNYENMKMAQVPMAEKSISDALRCGRCGQKKVSYSQAQTRSA 280
Query: 296 DEPMTTYVTCAECNKRWK 313
DEPMTT+ C C RWK
Sbjct: 281 DEPMTTFCECTVCGNRWK 298
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 18/182 (9%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDE--EITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
D +RDK ++ L KA +DD + DR K D + ++E + + +
Sbjct: 260 DVLRDKAKQFLFKAFIT----GSDDNLLYLIDRKKLND---IIYNIENELHKFFIEKKQS 312
Query: 201 EKRKH---RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
+K + +SI FN+ D+KNP ++ + P +ATM +E+ASDE+++E + +
Sbjct: 313 QKEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKKERNKCLQE 372
Query: 258 FMFKCEVPEK------KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKR 311
+ C+ KK +F+C C YHQ+QTRS+DEPMTT+VTC +CN R
Sbjct: 373 SLQACQSDWDVKNILLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNNR 432
Query: 312 WK 313
WK
Sbjct: 433 WK 434
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 70/114 (61%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K K+R I N+ + NPDL+ ++ G+VT + L + P+ELA + +++ EEI + +
Sbjct: 183 AYKDKYRIIYSNIISKNNPDLKHKITNGDVTSQYLVSCDPKELAPEHLKKKLEEIAKQNL 242
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 243 HNAQGATIQRSITDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 296
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 142/323 (43%), Gaps = 54/323 (16%)
Query: 17 DAAAATNRSEPEVQRCADALKHL-QAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASE 75
D AT +PE LK L Q+ T +LL T+ G ++ L+ HP +++ + A E
Sbjct: 12 DLQTATTTGKPE--DGVTILKQLKQSVVATEELLRETKAGLAIGKLRSHPRKEIADLAKE 69
Query: 76 LLHIWKQKIVLGKETNGNKRNGSKLS-------------------------VDEKFQKQT 110
L+ WK+ + GK+ S S +D +KQ+
Sbjct: 70 LVKKWKEAVEAGKKVKAAGGTPSTPSTATPSGKPTPPPAATSQPTKPQPSPIDPPSRKQS 129
Query: 111 SDSNAVKSGCSTAKEKKATASIRKPSHA-------DQAK-DSMRDKIR-KDLEKALSRVA 161
+ A ST K T ++++P D K +S DK R K +E +A
Sbjct: 130 VSTTA----ASTPTSSKPTPTLKQPQSNVVRTVKNDAVKIESKGDKTRDKCMELLYDAMA 185
Query: 162 SEAADDEE----ITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKN 217
S++ E I RV A +E ++++ + K R + N+ D+KN
Sbjct: 186 SDSGARESTHLIILKRVYA---------IEYQVYKEFDGVTKEYSTKMRRLFNNLKDKKN 236
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKC 277
P LR V+ G+++ E+ MTPEE+AS+ER+Q+N + + + + TD F+C
Sbjct: 237 PGLREAVVSGDISAEKFVKMTPEEMASEERKQQNSALNEANVHAALGAGEPEAETDAFQC 296
Query: 278 SGCGKSNCSYHQMQTRSADEPMT 300
C Y Q QTRSADEPMT
Sbjct: 297 GRCKNFKTRYRQAQTRSADEPMT 319
>gi|346321715|gb|EGX91314.1| transcription elongation factor s-ii [Cordyceps militaris CM01]
Length = 303
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%)
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
G K+K RS+ N+ ++ N L V+ E+ PER MT ++L SD++R++ E++ +
Sbjct: 186 GADYKKKIRSLFTNLKNKSNRALGVSVMGSEIPPERFVAMTDDDLKSDDQRKKEIELEKE 245
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
M K +VP +K +D +C C + SY Q QTRSADEPMTT+ C C RWK
Sbjct: 246 NMKKAQVPMAEKSISDSLECGKCKQKKVSYTQAQTRSADEPMTTFCECMNCGNRWK 301
>gi|430810870|emb|CCJ31590.1| unnamed protein product, partial [Pneumocystis jirovecii]
gi|430814597|emb|CCJ28186.1| unnamed protein product [Pneumocystis jirovecii]
Length = 276
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 45/278 (16%)
Query: 28 EVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLG 87
++Q+ ++ V+ LL+ T++G ++ L+ + + V + A E++ WK+ +
Sbjct: 12 DLQKAFQDRNQMKEVIVSESLLIDTKLGITVGKLRNYSEKYVADLAKEIVKKWKEDM--- 68
Query: 88 KETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRD 147
++G K+S+ E +D+ S ST P+ ++ +DS D
Sbjct: 69 ----SAMKSGKKVSLAE----NKTDTPITTSELST------------PNTFEKTRDSTTD 108
Query: 148 KIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRS 207
I K++ D K RD + + K ++
Sbjct: 109 CIEKNI----------TGD--------KVRD--NCVHLIYNALVYGSEESSATILSKAKA 148
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
I + D+ NP LR+ V+ GE++ R TMTP+E+AS ERR+E+++I+ +F + +
Sbjct: 149 I--DEYDKNNPTLRQNVVSGELSIPRFCTMTPQEMASKERREEDKKIEEMNLFNAQGAKP 206
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTC 305
K TD F+C C + SY+QMQTRSADEPMTT+ C
Sbjct: 207 IKAITDLFQCGKCKQRKVSYYQMQTRSADEPMTTFCEC 244
>gi|255939243|ref|XP_002560391.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585013|emb|CAP83061.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 306
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 24/288 (8%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK +Q T DLL T++G + K+ +V +SE++ W+ ++ K+ G+
Sbjct: 32 LKDIQTGVRATEDLLRQTRIGIIVNKFKQSKSPEVARLSSEIVSKWRTEVNKQKQGGGSA 91
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK-----DSMRDKI 149
+ Q T S + S K + ++ AD A+ + +RD
Sbjct: 92 ASRGSSGSPRPAQNGTGASTPAAATPSDKASKLSVPPDKRTWKADGAEINHTGNRVRDSC 151
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVMFEKLRPMGVAEKR-KH 205
+ L ++E PK V A +VE ++ L P E R K
Sbjct: 152 TGLMYDGLCVGSTEP--------------PKVVLSRAIAVEVSAYKYLGPETKEEYRTKI 197
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS+ N+ ++ NP LR RV+ GE+T ++ M+ +EL S E+R+ + +I+ + M K V
Sbjct: 198 RSLFQNLKNKSNPKLRVRVIEGEITADQFVRMSHDELRSVEQREADAKIQKENMDKAMVA 257
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++++ + +C CG+ +Y + QTR+ADEPMT + TC C K W+
Sbjct: 258 QQERSISKSLQCGKCGQRKVTYTEAQTRAADEPMTLFCTCLHCGKSWR 305
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 26/276 (9%)
Query: 44 VTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKR--NGS--- 98
+T +L ++ G ++ L+ H ++V + A E++ WK ++ K+ N K NG
Sbjct: 35 ITEAILRESKAGLAVGKLRSHAAKEVSDLAKEIVKKWKTEVEREKQQNAGKSTPNGKVPP 94
Query: 99 --KLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIR---KPSHADQAK-----DSMRDK 148
K SV ++ + S T A + + + D K D +RDK
Sbjct: 95 MRKASVASTSTATSATPSGTPSTPITPTMTMANGGSKGELRTAKTDGIKMNITGDKIRDK 154
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSI 208
+ + AL+ + A E+I R K S+E + + + K R+
Sbjct: 155 CVELIYDALA--SDSGAPSEQIMSRAK---------SIESTVLAEFSGTTGEYRSKIRTF 203
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKK 268
N+ D+ NP LR V+ GE+ ++ M+ +E+AS+ER+ + I + +FK E+
Sbjct: 204 FVNLKDKNNPGLRESVISGELPVQKFCRMSSQEMASEERKAADNRIIQENLFKALGAEEV 263
Query: 269 KGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVT 304
+ TD F+C C + C Y Q QTRSADEPMTT+VT
Sbjct: 264 QAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVT 299
>gi|388501372|gb|AFK38752.1| unknown [Medicago truncatula]
Length = 204
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 5 LVTLFGAAKKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKH 64
LV L+ AAKKAADA+ +T+ S E RC DAL+ L+ FPV Y +LV+TQVGK L+ L KH
Sbjct: 9 LVELYEAAKKAADASTSTDNSPSEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKH 68
Query: 65 PCEKVQNAASELLHIWKQKIVLGKETNGNKRNGS 98
P E ++ A +L+ IWK I+ KET+ NK S
Sbjct: 69 PRENIRAFAVDLIAIWKDVII--KETSKNKNGAS 100
>gi|325053992|pdb|3PO3|S Chain S, Arrested Rna Polymerase Ii Reactivation Intermediate
Length = 178
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 69/114 (60%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K ++R I N+ + NPDL+ ++ G++TPE LAT ++LA +Q+ EEI + +
Sbjct: 63 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNL 122
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + ++ TD+F C C + SY+Q+QTRSA P+TT+ TC C RWK
Sbjct: 123 YNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRWK 176
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 145/300 (48%), Gaps = 40/300 (13%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGN 93
+ L+ L+ VTY +L T++G ++ L+KH EK+ + A L+ WK + K ++
Sbjct: 27 EVLRALEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMALSPKASSSI 86
Query: 94 KRNGSKLSVDE--KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
+ + E + SN +K+ T + ++ P+ D+ + ++R K+++
Sbjct: 87 SSSSKPPAKKETSPKPSSSPGSNGLKTAPKTPAARVSSTPF-IPAGLDKVRATVRTKLKE 145
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK-----HR 206
LE ASE D P QVAA+VE M E++K +R
Sbjct: 146 ILE------ASEGGD------------PGQVAAAVEVAMARTYHMGAPGEQKKEYMAKYR 187
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK------AKFMF 260
+ FN+ +KN +LR+ +L V+ ++L MT EELA++E+R + E+++ A+ +
Sbjct: 188 QLSFNL--KKNGELRQNLLDDNVSGDQLVKMTAEELATEEKRAQIEKLRDDAFQEARLDW 245
Query: 261 ------KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
K + +GT F C C S S Q QTRSADEPMT +V C C RWKC
Sbjct: 246 AEANHDKIQKQTGTEGTKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNCGNRWKC 305
>gi|425781061|gb|EKV19043.1| Transcription elongation factor S-II [Penicillium digitatum PHI26]
gi|425783194|gb|EKV21053.1| Transcription elongation factor S-II [Penicillium digitatum Pd1]
Length = 306
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 24/288 (8%)
Query: 36 LKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
LK +Q T DLL T++G + K+ +V +SE++ W+ ++ K+ G+
Sbjct: 32 LKDIQTGVRATEDLLRQTRIGIIVNKFKQSKTPEVARLSSEIVSKWRTEVNKQKQGGGSA 91
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK-----DSMRDKI 149
+ Q T S + S K + ++ AD A+ + +RD
Sbjct: 92 ASRGSSGSPRPAQNATGASTPAAATPSDKASKLSVPPDKRTWKADGAEINHTGNRVRDSC 151
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQV---AASVERVMFEKLRPMGVAEKR-KH 205
+ L ++E PK + A +VE ++ L P E R K
Sbjct: 152 TGLMYDGLCVGSTEP--------------PKVILSRAIAVEISAYKYLGPETKEEYRTKI 197
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS+ N+ ++ NP LR RV+ GE+T ++ M+ +EL S E+R+ + +I+ + M K V
Sbjct: 198 RSLFQNLKNKSNPKLRVRVVEGEITSDQFVRMSHDELRSVEQREADAKIQKENMDKAMVA 257
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++++ + +C CG+ +Y + QTR+ADEPMT + TC C K W+
Sbjct: 258 QQERSISKSLQCGKCGQRKVTYTEAQTRAADEPMTLFCTCLNCGKSWR 305
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 25/281 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP-CEKVQNAASELLHIWKQKIVLGKETNG 92
+ LK LQ + D+L T++G ++ L+K ++V + L+ WK+ + N
Sbjct: 30 ELLKALQTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL---STPNT 86
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
K NG+ ++ + + ++KK AS S+ D++R K R+
Sbjct: 87 TKDNGNSSKSKKEGKDKDK---------KEDRDKKLPASFPPQSNT---TDAVRLKCREL 134
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L +AL + A E ++ P+++A +E ++ + + + K + RS + N+
Sbjct: 135 LTQAL-KAAGETSN--------ACGSPEELAEELEECIYAEFKNTDMRYKNRVRSRVANL 185
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNP LR G ++ RLA MTPEE+ASDE ++ E+ + + ++ + T
Sbjct: 186 KDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGTKT 245
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ KC C K NC+Y+Q+QTRS+DEPMTT+V C EC RWK
Sbjct: 246 EMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 286
>gi|429329053|gb|AFZ80812.1| transcription elongation factor S-II, putative [Babesia equi]
Length = 294
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 128/302 (42%), Gaps = 49/302 (16%)
Query: 28 EVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASE-------LLHIW 80
E+ L L+ + + L ST++G L L K KV+N + + L+ W
Sbjct: 25 EISTIDGYLSELERVTIDRETLQSTKIGVVLTKLSK----KVENVSKDTFDRVNGLIKNW 80
Query: 81 KQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQ 140
K+ + K GS S +K + S S ++ S P
Sbjct: 81 KEAL---------KSTGSTPSKRQKTEHTDSSS-----------PREPPVSAETPYSGAL 120
Query: 141 AKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
D MR+K + L K+ S D + V + + + R+ +K + +
Sbjct: 121 YNDEMRNKALRYLFKSFVSGHSCNPDIAVLNKLVYDIEGELYTHYITRLNAQKEYNLQL- 179
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
+SI FN+ D N R+ GE+ L TM ++ASDE++ + I + +
Sbjct: 180 -----KSIGFNLKDPNNKSFNDRIYKGEINSLDLVTMKSIDMASDEKKLQRNNILQESLQ 234
Query: 261 KCE---------VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKR 311
C+ + K KG QF+C C S+ YHQMQTRS+DEPMTT+VTC +C R
Sbjct: 235 ACQSDWAVKNIFLNNKSKG---QFRCFKCKSSDTVYHQMQTRSSDEPMTTFVTCLKCQNR 291
Query: 312 WK 313
WK
Sbjct: 292 WK 293
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D L+ L+A PVT +LL ST+VG S+ L+K E+V A L+ WK+ +
Sbjct: 3 DLLRELKAMPVTLNLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKAR 62
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKD 152
+ G L K+ ++ + I A D++R+K R+
Sbjct: 63 EQSRGGPLPPSS--SKEPPEAKDPSRKRPELPRMPSAPRITTFPPAPVTCDAVRNKCREM 120
Query: 153 LEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
L AL D + + V A D + ++A +E +F + + K + RS + N+
Sbjct: 121 LAAALR------TDHDHMA--VGA-DCEGLSAQIEECIFRDVGNTDMKYKNRVRSRISNL 171
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTT 272
D KNPDLRR VL G +TP+++A MT EE+ASDE ++ + + + + + ++ T
Sbjct: 172 KDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQT 231
Query: 273 DQFKCSGCGKSNCSYHQM 290
D F C C + NC+Y Q+
Sbjct: 232 DLFTCGKCRRKNCTYTQV 249
>gi|426222790|ref|XP_004005565.1| PREDICTED: transcription elongation factor A protein 3 [Ovis aries]
Length = 375
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 60/90 (66%)
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKS 283
VL G ++ +A MT EE+ASDE R+ + + + + ++ + TTD F+CS C K
Sbjct: 238 VLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKK 297
Query: 284 NCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 298 NCTYNQVQTRSADEPMTTFVLCNECGNRWK 327
>gi|389637312|ref|XP_003716294.1| transcription elongation factor S-II [Magnaporthe oryzae 70-15]
gi|351642113|gb|EHA49975.1| transcription elongation factor S-II [Magnaporthe oryzae 70-15]
Length = 304
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Query: 186 VERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD 245
+E+ F + + K RS+ N+ + N DL + V G + + MT +EL S+
Sbjct: 177 IEQAAFVAYKGDTAEYRNKMRSLFSNL--KSNRDLAKGVFSGNIAASKFVVMTSDELKSN 234
Query: 246 ERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTC 305
+ R++ EE+ + M K +VP ++ +D +CS C + SY Q QTRSADEPMTT+ C
Sbjct: 235 DLRKQEEELAKENMKKAQVPMAERSISDALECSKCKQKKVSYTQAQTRSADEPMTTFCEC 294
Query: 306 AECNKRWK 313
C RWK
Sbjct: 295 TVCGNRWK 302
>gi|440467322|gb|ELQ36551.1| transcription elongation factor S-II [Magnaporthe oryzae Y34]
Length = 306
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Query: 186 VERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD 245
+E+ F + + K RS+ N+ + N DL + V G + + MT +EL S+
Sbjct: 177 IEQAAFVAYKGDTAEYRNKMRSLFSNL--KSNRDLAKGVFSGNIAASKFVVMTSDELKSN 234
Query: 246 ERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTC 305
+ R++ EE+ + M K +VP ++ +D +CS C + SY Q QTRSADEPMTT+ C
Sbjct: 235 DLRKQEEELAKENMKKAQVPMAERSISDALECSKCKQKKVSYTQAQTRSADEPMTTFCEC 294
Query: 306 AECNKRWK 313
C RWK
Sbjct: 295 TVCGNRWK 302
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 130/304 (42%), Gaps = 34/304 (11%)
Query: 30 QRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKE 89
++ D L+ L + +L T +G S+ LK H + +A L+ WK I GK
Sbjct: 106 EKILDILQRLDKEKIDLAILTETLIGASVSKLKAHSDTNISISARGLVKKWKN-IAKGKP 164
Query: 90 TNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKI 149
+ +K S + + N +K + A +S P Q +R I
Sbjct: 165 ADASKSTASTNNTSSTITDVSPSPNKLK------RLDSAGSSDINPETEWQGLPQLRINI 218
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
K L S+ + +E+ + + A VE + R + K R+++
Sbjct: 219 CKKLHTIFRMSQSDLS--KELNESAVKQLCLSRAGEVEAAVDTWSRGVKQTYNEKVRTLV 276
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE---------------RR----QE 250
FN+ +KN LR RV++G+VTPERL MT EEL +DE RR Q
Sbjct: 277 FNL--KKNGPLRDRVILGQVTPERLVKMTSEELQTDEKAKAIEDTVKSLQESRRLDWDQA 334
Query: 251 NEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNK 310
NE+ K C + K + F C C + + Q QTRSADEPMT +V C C K
Sbjct: 335 NED---KINDMCGIKGDLKNAS-LFTCGRCKSTKTTSTQKQTRSADEPMTVFVLCLNCGK 390
Query: 311 RWKC 314
RWKC
Sbjct: 391 RWKC 394
>gi|440479245|gb|ELQ60026.1| transcription elongation factor S-II [Magnaporthe oryzae P131]
Length = 275
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Query: 186 VERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD 245
+E+ F + + K RS+ N+ + N DL + V G + + MT +EL S+
Sbjct: 146 IEQAAFVAYKGDTAEYRNKMRSLFSNL--KSNRDLAKGVFSGNIAASKFVVMTSDELKSN 203
Query: 246 ERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTC 305
+ R++ EE+ + M K +VP ++ +D +CS C + SY Q QTRSADEPMTT+ C
Sbjct: 204 DLRKQEEELAKENMKKAQVPMAERSISDALECSKCKQKKVSYTQAQTRSADEPMTTFCEC 263
Query: 306 AECNKRWK 313
C RWK
Sbjct: 264 TVCGNRWK 271
>gi|156564607|gb|ABU80627.1| transcription elongation factor TFIIS [Artemia franciscana]
Length = 108
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%)
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
M+ + N LR VL G V+ +L+ MTPEE+AS E + ++ + + ++ +
Sbjct: 5 MNLKSNNMLRLNVLTGAVSASKLSKMTPEEMASVEMKALRDKFVKEGIEDSQLAVVEGTQ 64
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
TD KC C K NC+Y+Q+QTRSADEPMTT+V C EC RWK
Sbjct: 65 TDLLKCGKCHKRNCTYNQLQTRSADEPMTTFVLCNECGHRWK 106
>gi|156841304|ref|XP_001644026.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114659|gb|EDO16168.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 323
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 67/112 (59%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K ++R I N+ + + DL+ ++ G++T LA +ELA + +Q+ EEI + +F
Sbjct: 210 KERYRVIYSNIISKNHQDLKHKINNGDITAVFLANCDTKELAPEHLKQKMEEITRQNLFN 269
Query: 262 CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ ++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 270 AQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWK 321
>gi|406607842|emb|CCH40780.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 240
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 69/108 (63%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS+ N+ + NP+LR ++ G++ P+ M+P E+A + ++E EEIK K +F +
Sbjct: 131 RSLTSNLRQKNNPELRNKINNGDLLPKVFINMSPREMAPESLKKELEEIKKKNLFNAQGA 190
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+++ TD+F C C + SY+Q+QTRSADEP+TT+ TC C RWK
Sbjct: 191 TQERAVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCENCGNRWK 238
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 136 SHADQAKDSMRDKIRKDLEKALSRVASE----AADDEEITDRVK-ARDPKQVAASVERVM 190
S A DS+R K R+ L AL R + D+EE+ R + A DP++
Sbjct: 71 SLARSTSDSVRMKYREMLPAAL-RTGDDCIEMGTDEEELGSRTEEAIDPERGNT------ 123
Query: 191 FEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQE 250
G+ K + +S + N++D KNPDLR+ G + P+ LA MT EE+ASDE ++
Sbjct: 124 -------GMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDELKEM 176
Query: 251 NEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNK 310
++ ++ + + + ++ + D C+ C K NC+ Q+Q SA EPMTT+V C EC
Sbjct: 177 HKNLRKEAIREHQMAKTGGTQPDSLTCAKCKKKNCTSTQVQACSAGEPMTTFVDCNECGN 236
Query: 311 RWK 313
+ K
Sbjct: 237 QQK 239
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RSIMFN+ D+ N D RRR+L+G + PE + +MT ++AS++R++E E IKAK MF+CE+
Sbjct: 1 RSIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFSDMASEQRKKETEGIKAKSMFECELG 60
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQ 289
+TDQFKC C + +Y +
Sbjct: 61 ATAVASTDQFKCGKCLQRKTTYSR 84
>gi|326436982|gb|EGD82552.1| hypothetical protein PTSG_03204 [Salpingoeca sp. ATCC 50818]
Length = 269
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
VA VE +F K R G K++ RS + +E + +++ GE+TPE+ AT ++
Sbjct: 141 VACKVEEAIFNKFRNDGDPYKKECRSRANYLKNE----ILDKLIAGELTPEQFATQAEQK 196
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
L S+E R+E E+ + + + P +K G T+Q KC CGK++ Y+++Q R+ADEPMT
Sbjct: 197 LVSEEDRRETEQ-HLEQALRDKNPGQKMGNRTNQLKCGKCGKNDVEYYEVQLRAADEPMT 255
Query: 301 TYVTCAECNKRWK 313
TC +C RW+
Sbjct: 256 VIATCIKCGHRWR 268
>gi|300708584|ref|XP_002996468.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
gi|239605773|gb|EEQ82797.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
Length = 166
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS FN+ D+ NP + + V G + P+ M+ E++ S + +++ + + ++ ++P
Sbjct: 59 RSKCFNLKDKNNPRICKEVYEGTIKPDEYILMSNEDMKSKDLKEQERKAYEESLYDIQMP 118
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E + TD FKCS CG+ SY Q+QTRSADEPMTT+VTC C +WK
Sbjct: 119 EIQ-AETDMFKCSTCGQRKSSYRQLQTRSADEPMTTFVTCV-CGHKWK 164
>gi|339898310|ref|XP_003392533.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
gi|321399505|emb|CBZ08701.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
Length = 333
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K ++++FN+ D KN +LRR+V+ GE+ ERL TM ELA+ E R+ EE +
Sbjct: 216 KDTFQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEERSKD 275
Query: 262 CEVPEKKKG----TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ E +K + FKC CG + S+ Q QTRS DEPMT +TC +CN +W+
Sbjct: 276 TNLSEIRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQWR 331
>gi|398015843|ref|XP_003861110.1| transcription elongation factor, putative [Leishmania donovani]
gi|322499335|emb|CBZ34408.1| transcription elongation factor, putative [Leishmania donovani]
Length = 333
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K ++++FN+ D KN +LRR+V+ GE+ ERL TM ELA+ E R+ EE +
Sbjct: 216 KDTFQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEERSKD 275
Query: 262 CEVPEKKKG----TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ E +K + FKC CG + S+ Q QTRS DEPMT +TC +CN +W+
Sbjct: 276 TNLSEIRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQWR 331
>gi|219120375|ref|XP_002180927.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407643|gb|EEC47579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 323
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 133/320 (41%), Gaps = 58/320 (18%)
Query: 29 VQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGK 88
V+R D L+ L +T ++L T +GK + LK HP + A L+ WKQ
Sbjct: 28 VERVHDVLQALDRCEMTLEILSDTMIGKIVSQLKSHP--TLNTTAKALVKKWKQVAKHTS 85
Query: 89 ETNGNKRN-----------GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH 137
ETN + S K +KQTS E++ + P+
Sbjct: 86 ETNSHSNTTPGRPALSSSSLSVSPSVNKPEKQTS-------------ERRDSRVNSPPAA 132
Query: 138 AD---QAKDSMRDKIRKDLEKAL---SRVASEAADDEEITDRVKARDPKQVAASVERVMF 191
AD Q MR I K + L +EA + + D + P+ A +E +
Sbjct: 133 ADLEWQGLAPMRQNICKKFYELLLLAKPALTEAGVNTDAVDHLIG--PR--AVEIEASLT 188
Query: 192 EKLRPM-GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQE 250
EK R G +K RS+ FN+ +KN L + V++G+V+ L + T E+LAS E RQ
Sbjct: 189 EKFRDRKGYTDK--ARSLAFNL--KKNQSLCQEVILGQVSASELVSFTSEQLASAETRQA 244
Query: 251 NEEIKAKFMFKCEVPEKKKGTTDQ----------------FKCSGCGKSNCSYHQMQTRS 294
+AK + + + D+ F C C + Q QTRS
Sbjct: 245 -RATEAKKLIDSRRLDWDQANEDKINEMCGIKGDLLNASLFTCGRCKSVKTTSTQKQTRS 303
Query: 295 ADEPMTTYVTCAECNKRWKC 314
ADEPMT +V C C RWKC
Sbjct: 304 ADEPMTVFVLCLNCGNRWKC 323
>gi|157869975|ref|XP_001683538.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
gi|68126604|emb|CAJ04034.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
Length = 333
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
++++FN+ D KN +LRR+V+ GE+ ERL TM ELA+ E R+ EE + +
Sbjct: 220 QTLLFNIKDSKNGELRRKVVEGELLVERLVTMDDLELANPELRKHIEEKIEERSKDTNLS 279
Query: 266 EKKKG----TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E +K + FKC CG + S+ Q QTRS DEPMT +TC +CN +W+
Sbjct: 280 EIRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQWR 331
>gi|401422690|ref|XP_003875832.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492072|emb|CBZ27346.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 337
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K ++++FN+ D KN +LRR+V+ GE+ ERL TM ELA+ E R+ EE +
Sbjct: 220 KDTFQTLLFNIKDTKNGELRRKVMEGELLVERLVTMDDLELANPELRRHIEEKIEERSKD 279
Query: 262 CEVPEKKKG----TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ E +K + FKC CG + S+ Q QTRS DEPMT +TC +CN +W+
Sbjct: 280 TNLSEIRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQWR 335
>gi|402086070|gb|EJT80968.1| transcription elongation factor S-II [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 295
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 21/282 (7%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKR 95
L++L+ + D L +T+ G + L+ + + + A+E+++ WK+ + K +
Sbjct: 29 LENLKKASPSEDSLRATKAGVVVGKLRSNADKSIGRVAAEVVNKWKKNVEAEKAKKAGRG 88
Query: 96 NGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRK--PSHADQAK--DSMRDKIRK 151
GS + + +KS +K AS RK D+ + + RD I
Sbjct: 89 QGSSPAASPTTATAPAPPPTMKS----SKPWTGDASKRKWDTDGVDKKRTGSATRDNIIG 144
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFN 211
L L+ ++ DD + A VE F++ + + RS+ N
Sbjct: 145 LLYNGLAYMSYAPIDDILVK-----------AIEVESAAFKEYNGETADYRTQMRSLFSN 193
Query: 212 MSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT 271
+ + N +L +RV G++ + MT +EL SD +++ E ++ + M K +VP ++
Sbjct: 194 L--KANRELAKRVFAGDIATAKFVKMTSDELKSDHLKKKEEALEKENMKKAQVPMVERSI 251
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+D +C C + SY Q QTRSADEPMTT+ C C RWK
Sbjct: 252 SDALECGKCKQKKVSYTQAQTRSADEPMTTFCECTVCGNRWK 293
>gi|84998998|ref|XP_954220.1| transcription elongation factor [Theileria annulata]
gi|65305218|emb|CAI73543.1| transcription elongation factor, putative [Theileria annulata]
Length = 418
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 30/198 (15%)
Query: 127 KATASIRKPSHADQAKDSMRDK--IRKDLEKALSRVASEAADDEEITDRVKARDPKQVAA 184
K +R + D+A + D I KD E + EE+T+++ + +
Sbjct: 239 KYMGPLRNNIYRDKALRYLFDSFIIGKDFEIEM----------EELTEKINLIE----KS 284
Query: 185 SVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
+ EK G ++ K I FN+ D KN ++ ++ L M+ ++AS
Sbjct: 285 LYNYYIIEKNNQKGYNQQLK--CIGFNLKDNKNTIFNYKLYNNIISINELIHMSSLQMAS 342
Query: 245 DERRQENEEIKAKFMFKCE---------VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSA 295
DE++ + EI + + C+ + K KG QFKC+ C +Y+Q+QTRS+
Sbjct: 343 DEKKLQRNEILEQSLEACQSDWEIKNIFLNNKTKG---QFKCNKCNSKITTYYQLQTRSS 399
Query: 296 DEPMTTYVTCAECNKRWK 313
DEPMTT+VTC CN RWK
Sbjct: 400 DEPMTTFVTCLNCNNRWK 417
>gi|71032861|ref|XP_766072.1| transcription elongation factor SII [Theileria parva strain Muguga]
gi|68353029|gb|EAN33789.1| transcription elongation factor SII, putative [Theileria parva]
Length = 324
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A ++ + I FN+ D KN L ++ +T + L MT ++ASDE++ + EI + +
Sbjct: 204 AYNQQLKCIAFNLKDVKNTILNYKLYNKMITVDELTRMTSLQMASDEKKLQRNEILEQSL 263
Query: 260 FKCEVPEKKKG------TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C+ K + QFKC+ C +Y+Q+QTRS+DEPMTT+VTC C RW+
Sbjct: 264 EACQSDWAIKNIFLAKKSAGQFKCNKCNSKVTTYYQLQTRSSDEPMTTFVTCLNCKNRWR 323
>gi|300120315|emb|CBK19869.2| unnamed protein product [Blastocystis hominis]
Length = 214
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 65/119 (54%), Gaps = 13/119 (10%)
Query: 203 RKH-RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM-- 259
R+H R I FN+ EKN L L GE+ ++LA+MT EE+ SD+ R+E E IK +
Sbjct: 100 RQHFRDIRFNL--EKNRQLLGDWLFGELESKKLASMTAEEMMSDDVRKERETIKEEMFEA 157
Query: 260 -----FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+K + K G FKC CG Y Q QTRSADEPMT + C C KRW+
Sbjct: 158 YQTDWYKTHMMNKLSGG---FKCRRCGSDKTQYMQKQTRSADEPMTVFFECMNCGKRWR 213
>gi|66816447|ref|XP_642233.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
gi|74856708|sp|Q54YG9.1|TCEA1_DICDI RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor tf2s
gi|60470313|gb|EAL68293.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
Length = 319
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 179 PKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
P+ +A +E M++ R + K K RS FN+ +KN LR +L +++ + +M
Sbjct: 183 PEDIAVEIEAEMYDIYRGVSKEYKEKLRSFKFNL--KKNDILRLSLLNRQISVAKFCSMD 240
Query: 239 PEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEP 298
+ASD+ ++E +++ + + + TTDQF+C C + C+Y Q+QTRSADEP
Sbjct: 241 IYSMASDDLKEERKKLDKFNTEASMLGQNNEATTDQFQCGKCKQRKCTYTQLQTRSADEP 300
Query: 299 MTTYVTCA--ECNKRWK 313
TT+V C C RW+
Sbjct: 301 PTTFVKCCVKGCGNRWR 317
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
D +++ + E + + G+ K + +S + N++D KNPDLR+ G + P+ LA M
Sbjct: 23 DEEELGSRTEEAIDPERGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARM 82
Query: 238 TPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADE 297
T EE+ASDE ++ ++ ++ + + + ++ + D C+ C K NC+ Q+Q SA E
Sbjct: 83 TAEEMASDELKEMHKNLRKEAIREHQMAKTGGTQPDSLTCAKCKKKNCTSTQVQACSAGE 142
Query: 298 PMTTYVTCAECNKRWK 313
PMTT+V C EC + K
Sbjct: 143 PMTTFVDCNECGNQQK 158
>gi|323450413|gb|EGB06294.1| hypothetical protein AURANDRAFT_29341 [Aureococcus anophagefferens]
Length = 275
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGN 93
D LK L A VT +L + G + L+KH V +A L+ WK+ +
Sbjct: 24 DILKALTAAKVTVAMLHEFKCGAVVSKLRKHEDAGVSASAKALIKKWKELAAAAGVPSTP 83
Query: 94 KRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDL 153
+ +GS + Q S + +G A D++R RK L
Sbjct: 84 RASGS-----SPREGQASSTAETAAGFEVA----------------DLGDAVRQSSRKKL 122
Query: 154 EKALSRVASEAADDEEITDR---VKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMF 210
+ LS + A + R A+V+R KLR + F
Sbjct: 123 LEVLSEGGAPAGAARAAEAVEREMHGRWANLADANVKRDYVAKLRQLS-----------F 171
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+ +KNPDLR RV G VTP L +M+ +ELA+ E + E +++ A+F + K
Sbjct: 172 NL--KKNPDLRARVAGGGVTPAELCSMSVDELATQEVQAERKKM-AEFQHDARSLDWDKK 228
Query: 271 TTDQ---FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
D+ + C C + S ++ QTRS DEPMT + CA+C RW+
Sbjct: 229 NRDRKTMYPCGKCKSTKVSNYEKQTRSGDEPMTQFFECADCGNRWR 274
>gi|154338127|ref|XP_001565288.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062337|emb|CAM42195.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 329
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K ++++F++ D KN +LRR+V+ GE+ ERL TM ELA+ E R++ EE +
Sbjct: 212 KDTFQTLLFSIKDSKNGELRRKVVEGELLVERLVTMDDRELANPELRKQIEEKMEERSKD 271
Query: 262 CEVPEKKKG----TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ E +K + FKC CG + S+ Q QTRS DEPMT +TC +C+ +W+
Sbjct: 272 TNLSEIRKAMRTSNSTLFKCHVCGARDSSWEQRQTRSGDEPMTVIITCNKCSTQWR 327
>gi|167535081|ref|XP_001749215.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772368|gb|EDQ86021.1| predicted protein [Monosiga brevicollis MX1]
Length = 286
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 133/296 (44%), Gaps = 27/296 (9%)
Query: 21 ATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCE--KVQNAASELLH 78
A++R+ + D LK L+A +T D+L ST++G + +K+ C+ + Q A LL
Sbjct: 14 ASDRARFDELMVRDCLKELKAVVMTKDILNSTKIGIIVSKVKRD-CKLGETQQLAKALLA 72
Query: 79 IWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHA 138
W+ ++ L +K SV D A+KS + KA ++ +P H
Sbjct: 73 DWRAQVGLQDSKAARNAKNNKSSV-------KGDDGALKSPLPRGSDGKAAQTVLEPHH- 124
Query: 139 DQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMG 198
+ D +R+K R+ L K LS AS +D + VAA +E F K
Sbjct: 125 -RCDDPVRNKFRELLCKKLS--ASIKPEDTA--------NAGMVAADIENACFIKHSDSA 173
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEV-TPERLATMTPEELASDERRQENEEIKAK 257
+ R + + D R L+ EV PE ++ L S E++ ++ K
Sbjct: 174 SEDYRA----LTRSRIQYCKDWIRGALMQEVMAPEEFVKLSGSALLSKEQQDVLQKDLEK 229
Query: 258 FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + +TDQ C C + SY ++QTRSADEPMT + +C +C KRW+
Sbjct: 230 ASHDRALAVAEGASTDQLVCPRCKARDASYTEVQTRSADEPMTIFASCKKCGKRWR 285
>gi|290994184|ref|XP_002679712.1| predicted protein [Naegleria gruberi]
gi|284093330|gb|EFC46968.1| predicted protein [Naegleria gruberi]
Length = 116
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
R++ N++ N D R V + E+L M +++AS E+++EN ++ + + V
Sbjct: 8 RTLSRNLNASNNDDFRSNVYHSIIPIEQLPIMKVQDMASKEKQKENALLQERKLHNSMVA 67
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ + F+C C K+ C++++MQTRSADEPMT ++TC C RWK
Sbjct: 68 KPAAVESSMFRCGKCKKTQCTFYEMQTRSADEPMTAFITCLSCGNRWK 115
>gi|395821365|ref|XP_003784013.1| PREDICTED: transcription elongation factor A protein 3 [Otolemur
garnettii]
Length = 326
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%)
Query: 237 MTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSAD 296
++ +E+ASDE R+ + + + + ++ + TTD F+CS C K NC+Y+Q+QTRSAD
Sbjct: 248 LSLQEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSAD 307
Query: 297 EPMTTYVTCAECNKRWK 313
EPMTT+V C EC RWK
Sbjct: 308 EPMTTFVLCNECGNRWK 324
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 24/176 (13%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDE--EITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
D +RDK ++ L KA +DD + DR K D + ++E + + +
Sbjct: 227 DVLRDKAKQFLFKAFIT----GSDDNLLYLIDRKKLND---IIYNIENELHKFFIEKKQS 279
Query: 201 EKRKH---RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
+K + +SI FN+ D+KNP ++ + P +ATM +E+ASDE+++E + +
Sbjct: 280 QKEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKKERNKCLQE 339
Query: 258 FMFKCE---------VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVT 304
+ C+ + + +KG +F+C C YHQ+QTRS+DEPMTT+VT
Sbjct: 340 SLQACQSDWDVKNILLKKTRKG---EFQCFKCKGYETVYHQLQTRSSDEPMTTFVT 392
>gi|342185610|emb|CCC95094.1| putative transcription elongation factor [Trypanosoma congolense
IL3000]
Length = 207
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 170 ITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGE 228
+T K D ++V+ +RV+ + P G +E R ++ +M D KN LR ++ G
Sbjct: 60 LTQGRKVEDEERVSGVAQRVV--EAIPGGRSESADTFRVLLVHMGDAKNEKLRESIIEGV 117
Query: 229 VTPERLATMTPEELASDERRQENEEIKAKFMFKC------EVPEKKKGTTDQFKCSGCGK 282
++ E L M EL + E R + E A F+ +C E+ + T+ F C C
Sbjct: 118 LSVETLVRMKESELLNPEERMKQE---AAFLERCKDTDLSEIRKATSTTSTLFPCPSCKA 174
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
NCS+ Q QTRSADEPMT + C C+ +W+
Sbjct: 175 RNCSWSQKQTRSADEPMTVFCICNVCDHKWR 205
>gi|301791824|ref|XP_002930880.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Ailuropoda melanoleuca]
Length = 285
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 18/133 (13%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A+ +E ++E+L+ M + S + N+ D +NP LRR VL G ++ +A MT E
Sbjct: 169 KMASVIEDNIYEELKSMDMKYWNLVHSXIRNLKDXRNPSLRRNVLSGTISAGLIAKMTAE 228
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+A DE RQ + + TTD F+ S C K NCS +Q+Q+ SAD+PMT
Sbjct: 229 EMACDELRQ--------------ITKAGGTTTDFFQYSKC-KKNCSNNQVQSCSADKPMT 273
Query: 301 TYVTCAECNKRWK 313
C EC WK
Sbjct: 274 ---XCNECGNHWK 283
>gi|357289731|gb|AET73044.1| transcription elongation factor A [Phaeocystis globosa virus 12T]
gi|357292531|gb|AET73867.1| transcription elongation factor A 1 [Phaeocystis globosa virus 14T]
Length = 173
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 29/176 (16%)
Query: 143 DSMRD--KIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
+SM D KI ++EK + + + AD + + +K + +Q + +KL+
Sbjct: 23 NSMLDNEKIALNMEKGIYNYSIQTADKKNL---IKKWNNEQFVT----IYIQKLK----- 70
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
I+ N++D P+L ++ + +A MT EEL D EE+ A
Sbjct: 71 ------MIINNITD---PELLDKITSKTIKAHLIAFMTHEELRPDLW----EELIAIKKM 117
Query: 261 KCE--VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
K E K + +TD+F C C ++ C+Y+Q+QTRSADE MTT+VTC C RWKC
Sbjct: 118 KDENKFSPKIEASTDEFTCFKCKENKCTYYQLQTRSADESMTTFVTCIPCGNRWKC 173
>gi|332244802|ref|XP_003271560.1| PREDICTED: transcription elongation factor A protein 3 [Nomascus
leucogenys]
Length = 295
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%)
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE R+ + + + + ++ + TTD F+CS C K NC+Y+Q+QTRSADEPMT
Sbjct: 221 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 280
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 281 TFVLCNECGNRWK 293
>gi|322511107|gb|ADX06420.1| putative transcription elongation factor TFIIS_C domain-containing
protein [Organic Lake phycodnavirus 2]
Length = 168
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 143 DSMRDKIRKDLEKALSR-----VASEAADDEEITDRVKARDPKQVAASVERVMF-EKLRP 196
D R++IR+ + K + ++ + I VK K+ S+ V++ +K +
Sbjct: 7 DEFRNRIRQHISKYVDNDFYCSNIEKSIYNYSIQQSVKYNIKKRWDNSLFVVLYLDKFKQ 66
Query: 197 MGVAEKRKHRSIMFNMSDEKNPDLRRRVLI---GEVTPERLATMTPEELASDERRQENEE 253
+ K H I+ + ++NP+ + + E+ P+ ++T E++ + +
Sbjct: 67 IWHYLKDDH--ILEKI--KQNPNFCKEISFKTEQEIYPDYWNSITEEKITHLDNKY---- 118
Query: 254 IKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
P K K +TD+FKC C C+Y+Q+QTRSADEPMTT+VTC C RWK
Sbjct: 119 ----------FP-KIKASTDKFKCGKCKSKECTYYQLQTRSADEPMTTFVTCISCGNRWK 167
Query: 314 C 314
C
Sbjct: 168 C 168
>gi|403349966|gb|EJY74429.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
K RS++FN+SD KN +LR ++L E++ ++L ++LAS+ +Q+ EE + +
Sbjct: 423 KARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVKKLASEWMKQKREESLLRTLSMKR 482
Query: 264 VPEKKKGTTDQ------FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ T Q F+C CG Y Q+Q ADEPMT +V C +C RWKC
Sbjct: 483 TDWDVQETLSQGEFQGMFQCE-CGSQKTGYIQLQIERADEPMTNFVYCYDCENRWKC 538
>gi|326525977|dbj|BAJ93165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKI 84
S PE QRC DAL+ L+ F V D+LV+TQVGK LR+L KHP +Q A++L WK+ +
Sbjct: 28 SPPEAQRCLDALRRLREFRVNTDVLVATQVGKRLRYLTKHPNSDIQAMAADLFGYWKKVV 87
Query: 85 V--LGKETNGNKRNG 97
+ GK+ NG NG
Sbjct: 88 IEETGKK-NGTPANG 101
>gi|297282476|ref|XP_001102747.2| PREDICTED: transcription elongation factor A protein 3-like isoform
2, partial [Macaca mulatta]
gi|402853350|ref|XP_003891359.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 105
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%)
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE R+ + + + + ++ + TTD F+CS C K NC+Y+Q+QTRSADEPMT
Sbjct: 31 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 90
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 91 TFVLCNECGNRWK 103
>gi|403368207|gb|EJY83934.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
K RS++FN+SD KN +LR ++L E++ ++L ++LAS+ +Q+ EE + +
Sbjct: 423 KARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVKKLASEWMKQKREESLLRTLSMKR 482
Query: 264 VPEKKKGTTDQ------FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ T Q F+C CG Y Q+Q ADEPMT +V C +C RWKC
Sbjct: 483 TDWDVQETLSQGEFQGMFQCE-CGSQKTGYIQLQIERADEPMTNFVYCYDCENRWKC 538
>gi|429962884|gb|ELA42428.1| transcription elongation factor S-II [Vittaforma corneae ATCC
50505]
Length = 274
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 216 KNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQF 275
+N L V ++ M P ++ S+E R + E + + +V TD F
Sbjct: 177 ENSKLCLSVYTSKIDTSDFVKMLPAQMQSEELRSRDSEYIKESLLASQVA-SAAADTDMF 235
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+CS C + C+Y Q+QTRS DEPMTT+VTC C RWK
Sbjct: 236 QCSKCKQKKCTYSQLQTRSCDEPMTTFVTCTNCGHRWK 273
>gi|296207010|ref|XP_002750408.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Callithrix jacchus]
gi|332807943|ref|XP_001165502.2| PREDICTED: transcription elongation factor A protein 3-like isoform
2, partial [Pan troglodytes]
Length = 75
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%)
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE R+ + + + + ++ + TTD F+CS C K NC+Y+Q+QTRSADEPMT
Sbjct: 1 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 60
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 61 TFVLCNECGNRWK 73
>gi|322510696|gb|ADX06010.1| putative transcription factor TFIIS_C family protein [Organic Lake
phycodnavirus 1]
Length = 168
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 36/48 (75%)
Query: 267 KKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
K K +TD+FKC C C+Y+Q+QTRSADEPMTT+VTC C RWKC
Sbjct: 121 KIKASTDKFKCGKCKSKECTYYQLQTRSADEPMTTFVTCISCGNRWKC 168
>gi|397629130|gb|EJK69212.1| hypothetical protein THAOC_09547 [Thalassiosira oceanica]
Length = 286
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 17/126 (13%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
K RS++FN+ +KN LR +V++G++ E+L M PEELA+ E +E K M +
Sbjct: 163 KVRSLVFNL--KKNGPLREQVILGQIVTEQLPKMPPEELATAEMNKERNAQAEKLMASRQ 220
Query: 264 VPEKKK--GTTDQ-------------FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAEC 308
+ +KK G ++ F C C + + Q QTRSADEPMT +V C C
Sbjct: 221 LDWEKKNEGKINEICGIKGDLLKASLFTCGRCKSTKTTSTQKQTRSADEPMTVFVLCLNC 280
Query: 309 NKRWKC 314
RWKC
Sbjct: 281 GNRWKC 286
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 90/180 (50%), Gaps = 38/180 (21%)
Query: 99 KLSVDEKFQKQTSDS--------NAVKSGCSTAKEKK---------------ATASIRKP 135
+LS +EK +K T DS +A K+G +E K +S KP
Sbjct: 863 RLSSEEKHEKTTKDSLNVACSSESATKTGVQEKQEAKKKRTEKGRTASNTHTPVSSATKP 922
Query: 136 SHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLR 195
S DQ + S+R +++ LEK L+ + T ++ +VA +E+ +F R
Sbjct: 923 S-VDQIRQSVRQSLKEILEKRLT----------DSTLKIPEERAAKVATKIEKELFSFFR 971
Query: 196 PMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
K K+RS++FN+ D KN L +RVL GEVTP+ L M+PEELAS E R++EN
Sbjct: 972 DTDSKYKNKYRSLIFNLKDPKNKILFKRVLKGEVTPDHLIRMSPEELASKELAAWRKREN 1031
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 65/111 (58%)
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
++++L+ + + + RS + N+ D +NP LRR VL G ++P +A MT EE+ASDE R+
Sbjct: 11 IYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDELRE 70
Query: 250 ENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
+ + + + ++ + TTD +CS C K NC+Y+Q+ EP T
Sbjct: 71 LRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVGKVLLTEPPT 121
>gi|297666066|ref|XP_002811364.1| PREDICTED: transcription elongation factor A protein 3-like [Pongo
abelii]
Length = 74
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ASDE R+ + + + + ++ + TTD F+CS C K NC+Y+Q+QTRSADEPMTT
Sbjct: 1 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTT 60
Query: 302 YVTCAECNKRWK 313
+V C EC RWK
Sbjct: 61 FVLCNECGNRWK 72
>gi|169806152|ref|XP_001827821.1| transcription elongation factor S-II [Enterocytozoon bieneusi H348]
gi|161779269|gb|EDQ31292.1| transcription elongation factor S-II [Enterocytozoon bieneusi H348]
Length = 180
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 191 FEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQE 250
++K P V EK +H I + D+ ++ GE+T + ++ E++ S++++ E
Sbjct: 66 YQKTFPKIVREKAQHLKI--------SKDICNKIYNGEITIKEFVELSSEDMKSEKQKLE 117
Query: 251 NEEIKAKFMFKCEVPEKKKGTTD----QFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCA 306
++I + ++ T+ FKC C K+ C+Y+Q+QTRS DEPMTT+V C
Sbjct: 118 EKKIVED-----SINSSRQACTEAETTMFKCGRCQKNQCTYYQLQTRSCDEPMTTFVRCT 172
Query: 307 ECNKRWK 313
C WK
Sbjct: 173 NCGHNWK 179
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 86 LGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ KE+ G +++ +KQ + ++ G AT+ KPS ADQ + S+
Sbjct: 146 IAKESTALASTGERVARSGTHEKQETKKKKMEKGGPNVHPPAATS---KPS-ADQIRQSV 201
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R ++ L K L+ D + ++ +VA +E+ +F R K K+
Sbjct: 202 RHSLKDILMKRLT--------DSNL--KIPEEKAAKVATKIEKELFSFFRDTDAKYKNKY 251
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 252 RSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 301
>gi|350539011|ref|NP_001232124.1| putative transcription elongation factor A2 [Taeniopygia guttata]
gi|197129380|gb|ACH45878.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 229
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 17/202 (8%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPC-EKVQNAASELLHIWKQKIVLGKETNG 92
D LK L++ P+T DLL ST++G S+ L+K E+V + A L+ WK+ + +E N
Sbjct: 28 DLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLDASEEKNE 87
Query: 93 NKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK---DSMRDKI 149
+K+ LS+ ++T +S S + +E T + K + A D++R+K
Sbjct: 88 DKKKS--LSLPTSSSRETGNSRDQSS--NKRQEPPKTPTTPKITTFPPAPITCDAVRNKC 143
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
R+ L AL ADD+ I D + +AA +E +++ ++ + K + RS +
Sbjct: 144 REMLTAALQ------ADDDYI---AIGADCEHIAAQIEECIYQDVKNTDMKYKNRVRSRI 194
Query: 210 FNMSDEKNPDLRRRVLIGEVTP 231
N+ D KNP+L++ VL G +TP
Sbjct: 195 SNLKDSKNPELKKNVLCGAITP 216
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T++L V+ G+ H K P K A KQ + + + +G+ +
Sbjct: 892 TFELAVARTPGRP--HSTKQPSSKPAQAKQPHSKSVKQPAAV--QAQPAEPSGANTTSTA 947
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
T++S ++ T+ +A ++K A + + +R +RK L AL EA
Sbjct: 948 PTPSSTTNSAPAEN---TSGSTEAVTEVKKTEPAQPSIEPVRLNVRKVLRDALLNRCKEA 1004
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
+D D V+ ++A +E +F+ R G K K+RS++FN+ D +N L R++
Sbjct: 1005 SDLSLSGDEVR-----RMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKI 1059
Query: 225 LIGEVTPERLATMTPEELASDE----RRQEN 251
L G++ P+RL MTPEELAS E R QEN
Sbjct: 1060 LRGKIAPDRLVRMTPEELASKELARWREQEN 1090
>gi|281207318|gb|EFA81501.1| hypothetical protein PPL_05490 [Polysphondylium pallidum PN500]
Length = 141
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 270 GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
TTDQF+C C + C+Y Q+QTRSADEP+TT+VTC CN RW
Sbjct: 28 ATTDQFQCGKCKQRKCTYFQLQTRSADEPLTTFVTCVNCNNRW 70
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T++L V+ G+ H K P K A KQ + + + +G+ +
Sbjct: 880 TFELAVARTPGRP--HSTKQPSSKPAQAKQPHSKSVKQPAAV--QAQPAEPSGANTTSTA 935
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
T++S ++ T+ +A ++K A + + +R +RK L AL EA
Sbjct: 936 PTPSSTTNSAPAEN---TSGSTEAVTEVKKTEPAQPSIEPVRLNVRKVLRDALLNRCKEA 992
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
+D D V+ ++A +E +F+ R G K K+RS++FN+ D +N L R++
Sbjct: 993 SDLSLSGDEVR-----RMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKI 1047
Query: 225 LIGEVTPERLATMTPEELASDE----RRQEN 251
L G++ P+RL MTPEELAS E R QEN
Sbjct: 1048 LRGKIAPDRLVRMTPEELASKELARWREQEN 1078
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T++L V+ G+ H K P K A KQ + + + +G+ +
Sbjct: 892 TFELAVARTPGRP--HSTKQPSSKPAQAKQPHSKSVKQPAAV--QAQPAEPSGANTTSTA 947
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
T++S ++ T+ +A ++K A + + +R +RK L AL EA
Sbjct: 948 PTPSSTTNSAPAEN---TSGSTEAVTEVKKTEPAQPSIEPVRLNVRKVLRDALLNRCKEA 1004
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
+D D V+ ++A +E +F+ R G K K+RS++FN+ D +N L R++
Sbjct: 1005 SDLSLSGDEVR-----RMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKI 1059
Query: 225 LIGEVTPERLATMTPEELASDE----RRQEN 251
L G++ P+RL MTPEELAS E R QEN
Sbjct: 1060 LRGKIAPDRLVRMTPEELASKELARWREQEN 1090
>gi|221041960|dbj|BAH12657.1| unnamed protein product [Homo sapiens]
Length = 117
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 240 EELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPM 299
+E+ASDE ++ + + + + + ++ + TD F C C K NC+Y Q+QTRSADEPM
Sbjct: 42 QEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPM 101
Query: 300 TTYVTCAECNKRWK 313
TT+V C EC RWK
Sbjct: 102 TTFVVCNECGNRWK 115
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 97 GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKA 156
G K S +KQ V+ G A+AS KPS ADQ + S+R ++ L K
Sbjct: 887 GEKASKSGTHEKQEMKKKKVEKGVLNVHPPAASAS--KPS-ADQIRQSVRHSLKDILMKR 943
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ D + +V +VA +E+ +F R K K+RS+MFN+ D K
Sbjct: 944 LT--------DSNL--KVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPK 993
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
N L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 994 NNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1032
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 45 TYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDE 104
T++L V+ G+ H K P K A KQ + + + +G+ +
Sbjct: 924 TFELAVARTPGRP--HSTKQPSSKPAQAKQPHSKSVKQPAAV--QAQPAEPSGANTTSTA 979
Query: 105 KFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
T++S ++ T+ +A ++K A + + +R +RK L AL EA
Sbjct: 980 PTPSSTTNSAPAEN---TSGSTEAVTEVKKTEPAQPSIEPVRLNVRKVLRDALLNRCKEA 1036
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
+D D V+ ++A +E +F+ R G K K+RS++FN+ D +N L R++
Sbjct: 1037 SDLSLSGDEVR-----RMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKI 1091
Query: 225 LIGEVTPERLATMTPEELASDE----RRQEN 251
L G++ P+RL MTPEELAS E R QEN
Sbjct: 1092 LRGKIAPDRLVRMTPEELASKELARWREQEN 1122
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 920 ASTSKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 968
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 969 LFSFFRDTDAKYKNKYRSLMFNLKDPKNSILFKKVLKGEVTPDHLIRMSPEELASKELAA 1028
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1029 WRRREN 1034
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 97 GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKA 156
G K S +KQ V+ G A+AS KPS ADQ + S+R ++ L K
Sbjct: 887 GEKASKSGTHEKQEMKKKKVEKGVLNVHPPAASAS--KPS-ADQIRQSVRHSLKDILMKR 943
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ D + +V +VA +E+ +F R K K+RS+MFN+ D K
Sbjct: 944 LT--------DSNL--KVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPK 993
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
N L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 994 NNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1032
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 129 TASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVER 188
T S KPS ADQ + S+R ++ L + L+ E +V +VA +E+
Sbjct: 918 TTSTSKPS-ADQIRQSVRHSLKDILMRRLT----------ESNLKVPEEKAAKVATKIEK 966
Query: 189 VMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE-- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 967 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELA 1026
Query: 247 --RRQEN 251
RR+EN
Sbjct: 1027 AWRRREN 1033
>gi|388549029|gb|AFK66230.1| transcription elongation factor TFIIS [Ostreococcus lucimarinus
virus OlV3]
Length = 171
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD-ERRQENEEIKAKFMFKC 262
KH+ + + + +P L+ +L +V + M PE+L D ++ EE K + K
Sbjct: 60 KHKFLQLQYNIKNSPVLKNWILNRKVKSLDVIEMRPEDLWPDGPYAKKIEEKIHKDLRKA 119
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ ++ T F C C SY+Q+QTRSADEPMTT+VTC +C++ WKC
Sbjct: 120 YLTKEMNNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTFVTCHQCDRNWKC 171
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 97 GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKA 156
G K S +KQ V+ G A+AS KPS ADQ + S+R ++ L K
Sbjct: 887 GEKASKSGTHEKQEMKKKKVEKGVLNVHPPAASAS--KPS-ADQIRQSVRHSLKDILMKR 943
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ D + +V +VA +E+ +F R K K+RS+MFN+ D K
Sbjct: 944 LT--------DSNL--KVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPK 993
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
N L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 994 NNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1032
>gi|163954997|ref|YP_001648101.1| hypothetical protein OsV5_024r [Ostreococcus virus OsV5]
gi|163638446|gb|ABY27805.1| hypothetical protein OsV5_024r [Ostreococcus virus OsV5]
Length = 167
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK-AKFMFKC 262
KH+ + + +P L R ++ +V + + M PEEL D E K K + K
Sbjct: 56 KHKFLQLQYNLRNSPALNRWIIEKKVKSKDVVDMRPEELWPDGPCATAIEDKIVKDLRKA 115
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ ++ K T F C C + SY+Q+QTRSADEPMTT+V+C C++ WKC
Sbjct: 116 YLAQEIKDTEGFFTCGRCKSNKTSYYQLQTRSADEPMTTFVSCHNCDRNWKC 167
>gi|387593442|gb|EIJ88466.1| transcription elongation factor A [Nematocida parisii ERTm3]
gi|387597099|gb|EIJ94719.1| transcription elongation factor A [Nematocida parisii ERTm1]
Length = 164
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
R+ N+ D + L V G + E+ MT +E+ S E ++ +I + + +
Sbjct: 56 RTKYLNLKDASHKWLCTSVYNGVLAIEKFIAMTGDEMRSKELKELEAKIFQRALLDTTIA 115
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+++ TD F C+ C + C+Y Q+QTRSADEPMTTYV C C WK
Sbjct: 116 QQE-AETDIFFCTKCKQRKCTYRQLQTRSADEPMTTYVHCVVCKNNWK 162
>gi|378755040|gb|EHY65067.1| transcription elongation factor A [Nematocida sp. 1 ERTm2]
Length = 164
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
R+ N+ D N L V G + ++ MT E++ S E ++ +I + + +
Sbjct: 55 FRTKYLNLKDASNKWLCTSVYNGVLEIDKFIAMTGEDMKSKELKELEAKIFQRALLDTTI 114
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+++ TD F C+ C + C+Y Q+QTRSADEPMTTYV C C WK
Sbjct: 115 AQQE-AETDIFFCTKCKQRKCTYRQLQTRSADEPMTTYVHCVVCKNNWK 162
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 932 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 980
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 981 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1040
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1041 WRRREN 1046
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 186 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 234
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 235 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 294
Query: 247 -RRQEN 251
RR+EN
Sbjct: 295 WRRREN 300
>gi|314055114|ref|YP_004063452.1| putative transcription elongation factor TFIIS [Ostreococcus tauri
virus 2]
gi|313575005|emb|CBI70018.1| putative transcription elongation factor TFIIS [Ostreococcus tauri
virus 2]
Length = 171
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD-ERRQENEEIKAKFMFKC 262
KH+ + + + +P L+ +L +V + M PE+L D ++ EE K + K
Sbjct: 60 KHKFLQLQYNIKNSPVLKNWILNRKVKSLDVIEMRPEDLWPDGPYAKKIEEKIHKDLRKA 119
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ + T F C C SY+Q+QTRSADEPMTT+VTC +C++ WKC
Sbjct: 120 YLTREMNNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTFVTCHQCDRNWKC 171
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 922 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 970
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 971 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1030
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1031 WRRREN 1036
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 917 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 965
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1025
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1026 WRRREN 1031
>gi|260665894|ref|YP_003212848.1| hypothetical protein H665_p024 [Ostreococcus tauri virus 1]
gi|260160912|emb|CAY39612.1| hypothetical protein OTV1_024 [Ostreococcus tauri virus 1]
Length = 167
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK-AKFMFKC 262
KH+ + + +P L R ++ +V + + M PEEL D E K K + K
Sbjct: 56 KHKFLQLQYNLRNSPALNRWIVEKKVKSKDVVDMRPEELWPDGPCATAIEDKIVKDLRKA 115
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ ++ K T F C C + SY+Q+QTRSADEPMTT+V+C C++ WKC
Sbjct: 116 YLAQEIKDTEGFFTCGRCKSNKTSYYQLQTRSADEPMTTFVSCHNCDRNWKC 167
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 829 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 877
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 878 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 937
Query: 247 -RRQEN 251
RR+EN
Sbjct: 938 WRRREN 943
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 97 GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKA 156
G K S +KQ V+ G A+AS KPS ADQ + S+R ++ L K
Sbjct: 1012 GEKASKPGTHEKQEMKKKKVEKGVLNVHPPAASAS--KPS-ADQIRQSVRHSLKDILMKR 1068
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ D + +V +VA +E+ +F R K K+RS+MFN+ D K
Sbjct: 1069 LT--------DSNL--KVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPK 1118
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
N L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 1119 NNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1157
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + ++ +VA +E+
Sbjct: 932 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KIPEEKAAKVATKIEKE 980
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 981 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1040
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1041 WRRREN 1046
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE- 201
D +R K+R+ L AL R E E T+ + DP VAA VE ++ KL V++
Sbjct: 405 DEVRSKVREQLASALQRALDEL-KAEGYTEALP--DPAAVAADVETELY-KLHDNSVSKD 460
Query: 202 -KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDER---RQENEEIKAK 257
K K RS+ FN+ D NP+LR RVL GE+ P RL T+ P ELA E RQ+ +E AK
Sbjct: 461 YKAKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAELARKELSEWRQKRQEEAAK 520
Query: 258 FMF 260
+F
Sbjct: 521 MVF 523
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 15/128 (11%)
Query: 128 ATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVE 187
A A KPS ADQ + S+R ++ L K L+ D + +V +VA +E
Sbjct: 904 AAAPTSKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIE 952
Query: 188 RVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE- 246
+ +F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 953 KELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKEL 1012
Query: 247 ---RRQEN 251
RR+EN
Sbjct: 1013 AAWRRREN 1020
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + ++ +VA +E+
Sbjct: 917 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KIPEEKAAKVATKIEKE 965
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1025
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1026 WRRREN 1031
>gi|313768224|ref|YP_004061904.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
gi|312598920|gb|ADQ90944.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
Length = 171
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K+K SI ++ D NP L++ ++ + + M PEEL D + E K +
Sbjct: 60 KQKFLSIQKSLKD--NPKLKKSIIEKRLKSHDVINMRPEELCPDGLYAKQIETKIHKEIR 117
Query: 262 CEVPEKKKGTTDQF-KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
E ++ D F KC C +Y+Q+QTRSADEPMTT+V+C C++ WKC
Sbjct: 118 KEYLSREIKNQDGFFKCGRCKSMKTTYYQLQTRSADEPMTTFVSCLNCDRNWKC 171
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + ++ +VA +E+
Sbjct: 829 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KIPEEKAAKVATKIEKE 877
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 878 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 937
Query: 247 -RRQEN 251
RR+EN
Sbjct: 938 WRRREN 943
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 683 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 731
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 732 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 791
Query: 247 -RRQEN 251
RR+EN
Sbjct: 792 WRRREN 797
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
S KPS ADQ + S+R ++ L K L+ E +V +VA +E+
Sbjct: 1091 TSTSKPS-ADQIRQSVRHSLKDILMKRLT----------ESNLKVPEEKAAKVATKIEKE 1139
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 1140 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1199
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1200 WRRREN 1205
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 918 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 966
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 967 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1026
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1027 WRRREN 1032
>gi|119615454|gb|EAW95048.1| transcription elongation factor A (SII), 3, isoform CRA_a [Homo
sapiens]
Length = 79
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 237 MTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSAD 296
M A DE R+ + + + + ++ + TTD F+CS C K NC+Y+Q+QTRSAD
Sbjct: 1 MGSASTAHDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSAD 60
Query: 297 EPMTTYVTCAECNKRWK 313
EPMTT+V C EC RWK
Sbjct: 61 EPMTTFVLCNECGNRWK 77
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 186 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 234
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 235 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 294
Query: 247 -RRQEN 251
RR+EN
Sbjct: 295 WRRREN 300
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 97 GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKA 156
G K S +KQ V G + A AS KPS DQ + S+R +++ L K
Sbjct: 889 GEKSSKSGTHEKQEMKKKKVDKGVPSVHPPAAPAS--KPS-TDQIRQSVRHSLKEILMKR 945
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ D + +V +VA +E+ +F R K K+RS+MFN+ D K
Sbjct: 946 LT--------DSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPK 995
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
N L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 996 NNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1034
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 919 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 967
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 968 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1027
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1028 WRRREN 1033
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 97 GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKA 156
G K S +KQ V+ G + AT S KPS A+Q + S+R ++ L K
Sbjct: 1040 GEKTSKPGTHEKQEIKKKKVEKGVANVHPPAATTS--KPS-ANQIRQSVRHSLKDILMKR 1096
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ D + +V +VA +E+ +F R K K+RS+MFN+ D K
Sbjct: 1097 LT--------DSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPK 1146
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
N L ++VL GEVTP+ L M PEELAS E RR+EN
Sbjct: 1147 NNILFKKVLKGEVTPDHLIRMNPEELASKELAAWRRREN 1185
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 97 GSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKA 156
G K S +KQ V G + A AS KPS DQ + S+R +++ L K
Sbjct: 801 GEKSSKSGTHEKQEMKKKKVDKGVPSVHPPAAPAS--KPS-TDQIRQSVRHSLKEILMKR 857
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L+ D + +V +VA +E+ +F R K K+RS+MFN+ D K
Sbjct: 858 LT--------DSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPK 907
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
N L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 908 NNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 946
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 86 LGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ KE+ G +++ +KQ + ++ G AT+ KPS ADQ + S+
Sbjct: 855 IAKESTALASTGERVARSGTHEKQETKKKKMEKGGPNVHPPAATS---KPS-ADQIRQSV 910
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R ++ L K L+ D + ++ +VA +E+ +F R K K+
Sbjct: 911 RHSLKDILMKRLT--------DSNL--KIPEEKAAKVATKIEKELFSFFRDTDAKYKNKY 960
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 961 RSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1010
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 86 LGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ KE+ G +++ +KQ + ++ G AT+ KPS ADQ + S+
Sbjct: 855 IAKESTALASTGERVARSGTHEKQETKKKKMEKGGPNVHPPAATS---KPS-ADQIRQSV 910
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R ++ L K L+ D + ++ +VA +E+ +F R K K+
Sbjct: 911 RHSLKDILMKRLT--------DSNL--KIPEEKAAKVATKIEKELFSFFRDTDAKYKNKY 960
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 961 RSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1010
>gi|388548782|gb|AFK65984.1| hypothetical protein OLVG_00230 [Ostreococcus lucimarinus virus
OlV6]
Length = 171
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD-ERRQENEEIKAKFMFKC 262
KH+ + + + +P L+ +L +V + M PE+L D ++ EE K + K
Sbjct: 60 KHKFLQLQYNLKNSPVLKNWILNRKVKSLDVIEMRPEDLWPDGPYAKKIEEKIHKDLRKD 119
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ ++ T F C C SY+Q+QTRSADEPMTT+VTC +C++ WKC
Sbjct: 120 YLTKEMNNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTFVTCHQCDRNWKC 171
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
S KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 951 TSTSKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 999
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 1000 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1059
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1060 WRRREN 1065
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 139/325 (42%), Gaps = 77/325 (23%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+ + G
Sbjct: 9 DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPKG 68
Query: 93 N-------------------------------KRNGSKL---SVDEKFQKQTSD------ 112
KR K SVD K +S
Sbjct: 69 EKGKEREKAKKKEKGLDCSDWKPEAGLSPPRKKREDPKTRRDSVDSKSSATSSPKRPSVE 128
Query: 113 -SNAVKSGCSTAKEKKATASIRKPSHADQ---------AKDSMRDKIRKDLEKALSRVAS 162
SN+ KS A+ + +S P+ A DS+RDK + L AL
Sbjct: 129 RSNSSKS---KAESPRTPSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAALK---- 181
Query: 163 EAADDE-------------EITDRVKARDPKQVAASVERVM--FEKLRPMGVAEKRKHRS 207
ADD+ EI D + + Q ++R+ ++L+ + + + RS
Sbjct: 182 --ADDDYKDYGVNCDKMASEIEDHI--LELCQGCGCLDRLAAPLQELKSTDMKYRNRVRS 237
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEK 267
+ N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + + ++ +
Sbjct: 238 RISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 297
Query: 268 KKGTTDQFKCSGCGKSNCSYHQMQT 292
TTD F+CS C K NC+Y+Q+ T
Sbjct: 298 GGTTTDLFQCSKCKKKNCTYNQVWT 322
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 86 LGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSM 145
+ KE+ G +++ +KQ + ++ G AT+ KPS ADQ + S+
Sbjct: 14 IAKESTALASTGERVARSGTHEKQETKKKKMEKGGPNVHPPAATS---KPS-ADQIRQSV 69
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH 205
R ++ L K L+ D + ++ +VA +E+ +F R K K+
Sbjct: 70 RHSLKDILMKRLT--------DSNL--KIPEEKAAKVATKIEKELFSFFRDTDAKYKNKY 119
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 120 RSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 169
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
S KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 920 TSTSKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 968
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 969 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1028
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1029 WRRREN 1034
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
S KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 865 TSTSKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 913
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 914 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 973
Query: 247 -RRQEN 251
RR+EN
Sbjct: 974 WRRREN 979
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 916 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 964
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
++ R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 965 LYSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1024
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1025 WRRREN 1030
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 983 ASACKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 1031
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 1032 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1091
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1092 WRRREN 1097
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 828 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 876
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
++ R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 877 LYSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 936
Query: 247 -RRQEN 251
RR+EN
Sbjct: 937 WRRREN 942
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 916 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 964
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
++ R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 965 LYSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1024
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1025 WRRREN 1030
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 922 ASTSKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 970
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 971 LFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1030
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1031 WRRREN 1036
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 828 ASASKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 876
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
++ R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 877 LYSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 936
Query: 247 -RRQEN 251
RR+EN
Sbjct: 937 WRRREN 942
>gi|444731638|gb|ELW71990.1| Transcription elongation factor A protein 1, partial [Tupaia
chinensis]
Length = 151
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMT 300
E+ASDE ++ + + + + + ++ + TD F C C K NC+Y Q+QTRSADEPMT
Sbjct: 43 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 102
Query: 301 TYVTCAECNKRWK 313
T+V C EC RWK
Sbjct: 103 TFVVCNECGNRWK 115
>gi|429965603|gb|ELA47600.1| transcription elongation factor S-II [Vavraia culicis
'floridensis']
Length = 181
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 13/144 (9%)
Query: 171 TDRVKARDPKQVAASVERVMFE-KLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEV 229
DR++A Q+A+ +ER +++ K+ P + RS N+ D N DL + G +
Sbjct: 49 VDRLRA---AQLASELEREIYDNKIAPQQI------RSKYLNLKDTSN-DLCTGIYEGRI 98
Query: 230 TPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQ 289
M+ +E+ S RR + ++ + + ++ + + TD F C C + C Y Q
Sbjct: 99 GVHEFLLMSMDEMKSKARRSSDNDLIERSIEGSQIAQMEV-ETDIFFCFKCKQRKCRYRQ 157
Query: 290 MQTRSADEPMTTYVTCAECNKRWK 313
+QTRSADEPMTTYV C +C WK
Sbjct: 158 IQTRSADEPMTTYVFC-KCGNTWK 180
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
AS KPS ADQ + S+R ++ L K L+ D + +V +VA +E+
Sbjct: 834 ASTSKPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKE 882
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 883 LFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 942
Query: 247 -RRQEN 251
RR+EN
Sbjct: 943 WRRREN 948
>gi|407860299|gb|EKG07322.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
R ++ N+ D KN LR ++ G + E L M+ +L + E R+ EE K ++
Sbjct: 130 FRVLLVNLRDAKNTKLREDIIEGRLPVEVLVHMSERDLLNPEARKNQEEEFLKRSRDTDL 189
Query: 265 PEKKKGTTDQ---FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E ++ + F+C C +CS+ Q QTRSADEPMT + C C+ +W+
Sbjct: 190 SEIRRAMATKSTLFQCPSCKARDCSWTQKQTRSADEPMTVFCICNVCDHKWR 241
>gi|298711796|emb|CBJ32824.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 371
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQE-----NEEIKAKF 258
K R ++FN+ +KN LR+ V G V P+RL MT EL + ++R+ +E +A+
Sbjct: 250 KARQLVFNL--KKNDQLRQDVREGLVEPQRLVAMTSTELMAKDKREAMDKAVSERTEARM 307
Query: 259 MFKCEVPEKK-------KGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKR 311
+ + E K K T F+C C + +Y Q QTRSADEPMTT+VTC+ C R
Sbjct: 308 LDWYDKNEDKINKQCGIKETDGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNR 367
Query: 312 WK 313
WK
Sbjct: 368 WK 369
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQ 82
S +V+R AD L L VT +L ++VG ++ LKKH E+V +A L+ WK+
Sbjct: 19 SAEDVERIADVLGSLGKVEVTLAVLQESKVGATVSKLKKHADEEVSKSAKALVKKWKR 76
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
KPS ADQ + S+R ++ L K L+ D + +V +VA +E+ +F
Sbjct: 913 KPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKELFSF 961
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQ 249
R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+
Sbjct: 962 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRR 1021
Query: 250 EN 251
EN
Sbjct: 1022 EN 1023
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
KPS ADQ + S+R ++ L K L+ D + +V +VA +E+ +F
Sbjct: 913 KPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKELFSF 961
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQ 249
R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+
Sbjct: 962 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRR 1021
Query: 250 EN 251
EN
Sbjct: 1022 EN 1023
>gi|378706130|gb|AFC34931.1| hypothetical protein OtV6_023c [Ostreococcus tauri virus RT-2011]
Length = 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD-ERRQENEEIKAKFMF 260
K+K I N+ + +P L+ +L ++ + + M PE+L D + EE K M
Sbjct: 60 KQKFLQIQHNLKN--SPVLKGWILDKKIKTKDVIDMRPEDLWPDGPYAKMMEERIIKEMR 117
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
K + ++ K F C C +Y+Q+QTRSADEPMTT+VTC C++ WKC
Sbjct: 118 KAYLAQEVKNQEGFFTCGRCKSKKTTYYQLQTRSADEPMTTFVTCLNCDRNWKC 171
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
KPS ADQ + S+R ++ L K L+ D + +V +VA +E+ +F
Sbjct: 913 KPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKELFSF 961
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQ 249
R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+
Sbjct: 962 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRR 1021
Query: 250 EN 251
EN
Sbjct: 1022 EN 1023
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
KPS ADQ + S+R ++ L K L+ D + +V +VA +E+ +F
Sbjct: 832 KPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKELFSF 880
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQ 249
R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+
Sbjct: 881 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRR 940
Query: 250 EN 251
EN
Sbjct: 941 EN 942
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
KPS ADQ + S+R ++ L K L+ D + +V +VA +E+ +F
Sbjct: 825 KPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KVPEEKAAKVATKIEKELFSF 873
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQ 249
R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+
Sbjct: 874 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRR 933
Query: 250 EN 251
EN
Sbjct: 934 EN 935
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 16/128 (12%)
Query: 128 ATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVE 187
A A+I KPS ADQ + S+R ++ L K L+ D + ++ +VA +E
Sbjct: 899 AAAAI-KPS-ADQIRQSVRHSLKDILMKRLT--------DSNL--KIPEEKSAKVATKIE 946
Query: 188 RVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE- 246
+ +F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 947 KELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1006
Query: 247 ---RRQEN 251
RR+EN
Sbjct: 1007 AAWRRREN 1014
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ ++ +L + + D + ++ +VA +E+ +F R K K+R
Sbjct: 916 DQIRQSVKHSLKDILMKRLTDSNL--KIPEERASKVATKIEKELFSFFRDTDAKYKNKYR 973
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 974 SLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1022
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ + +L + + D + +V +VA +E+ +F R K K+R
Sbjct: 930 DQIRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYR 987
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 988 SLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1036
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 20/172 (11%)
Query: 89 ETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQ-----AKD 143
E G K + LSV EK + KSG +E K + + P+ A A
Sbjct: 879 EEKGEKISKESLSVVEK---------STKSGVHEKQEIKKKKNEKGPTSATHLPNVPASK 929
Query: 144 SMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR 203
D+IR ++++L + + D + ++ +VA +ER +F R K
Sbjct: 930 PSADQIRHSVKQSLKEILMKRLTDSSL--KIPEERAAKVATRIERELFSFFRDTDSKYKN 987
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E R++EN
Sbjct: 988 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQREN 1039
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ ++++L + + D + ++ +VA +ER +F R K K+R
Sbjct: 957 DQIRQSVKQSLKEILMKRLTDSSL--KIPEERAAKVATRIERELFSFFRDTDAKYKNKYR 1014
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E R++EN
Sbjct: 1015 SLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQREN 1063
>gi|71657176|ref|XP_817107.1| transcription elongation factor [Trypanosoma cruzi strain CL
Brener]
gi|70882278|gb|EAN95256.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
R ++ N+ D KN LR ++ G + E L M+ +L + E R+ EE K ++
Sbjct: 130 FRVLLVNLRDSKNTKLREDIIEGRLPVEVLVHMSERDLLNPEARKNQEEEFLKRSKDTDL 189
Query: 265 PEKKKGTTDQ---FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E ++ + F C C +CS+ Q QTRSADEPMT + C C+ +W+
Sbjct: 190 SEIRRAMATKSTLFPCPSCKARDCSWTQKQTRSADEPMTVFCICNVCDHKWR 241
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 132/331 (39%), Gaps = 112/331 (33%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEK-VQNAASELLHIWKQKIVLGKETNG 92
D LK L + ++ LL +T++G ++ ++KH +K V + A L+ WK+ + + T G
Sbjct: 28 DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPRTTKG 87
Query: 93 N-----------------------------KRNGS-----KLSVDEKFQKQTSD------ 112
K+ G + SVD + +S
Sbjct: 88 EREAREKAKKKEKGLGSSGWKPEAGLSPPRKKEGGEPKTRRDSVDSRSSTTSSPKRPSLE 147
Query: 113 -SNAVKSGCSTAKEKKATASIRKPSHADQA---------KDSMRDKIRKDLEKALSRVAS 162
SN+ +S T K + ++ P+ A DS+RDK + L AL
Sbjct: 148 RSNSSRSKVETPKTPSSPST---PTFAPAVCLLASCYLTGDSVRDKCVEMLSAAL----- 199
Query: 163 EAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
+A DD D D ++A+ +E ++++L+ + + + RS + N+ D +NP LRR
Sbjct: 200 KAEDD--FKDYGVNCD--KLASEIETHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRR 255
Query: 223 RVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
VL G ++PE +A MT E
Sbjct: 256 NVLSGTISPELIAKMTAE------------------------------------------ 273
Query: 283 SNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+QTRSADEPMTT+V C EC RWK
Sbjct: 274 -------VQTRSADEPMTTFVLCNECGNRWK 297
>gi|71414282|ref|XP_809248.1| transcription elongation factor [Trypanosoma cruzi strain CL
Brener]
gi|70873602|gb|EAN87397.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
R ++ N+ D KN LR ++ G + E L M+ +L + E R+ EE K ++
Sbjct: 130 FRVLLVNLRDAKNTKLREDIIEGRLPVEVLVHMSERDLLNPEARKNQEEEFLKRSRDTDL 189
Query: 265 PEKKKGTTDQ---FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E ++ + F C C +CS+ Q QTRSADEPMT + C C+ +W+
Sbjct: 190 SEIRRAMATKSTLFPCPSCKARDCSWTQKQTRSADEPMTVFCICNVCDHKWR 241
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ ++++L + + D + ++ +VA +ER +F R K K+R
Sbjct: 852 DQIRQSVKQSLKEILMKRLTDSSL--KIPEERAAKVATRIERELFSFFRDTDAKYKNKYR 909
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E R++EN
Sbjct: 910 SLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQREN 958
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ + +L + + D + +V +VA +E+ +F R K K+R
Sbjct: 925 DQIRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYR 982
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 983 SLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1031
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ ++ +L + + D + ++ +VA +E+ +F R K K+R
Sbjct: 924 DQIRQSVKHSLKDILMKRLTDSNL--KIPEERAAKVATKIEKELFSFFRDTDAKYKNKYR 981
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 982 SLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 1030
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ ++++L + + D + ++ +VA +ER +F R K K+R
Sbjct: 940 DQIRQSVKQSLKEILMKRLTDSSL--KIPEERAAKVATRIERELFSFFRDTDAKYKNKYR 997
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E R++EN
Sbjct: 998 SLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQREN 1046
>gi|334346763|ref|XP_003341849.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Monodelphis domestica]
Length = 366
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 29/187 (15%)
Query: 142 KDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAE 201
+D MR K + L AL A+ D++ TD ++ ++A +E +F
Sbjct: 185 QDPMRSKCVELLYGALVTCAT----DQQKTDHLQ-----KLAREIEEYIFVLYSKNLKKY 235
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK 261
K RS + N+ ++KNP L++ + G ++P+ A MT E+A++E +Q ++A +
Sbjct: 236 KNCIRSKVSNLKNQKNPHLQQNLFSGTLSPKEFAEMTVMEMANEELKQ----LRASYTES 291
Query: 262 CE----VPEKKKGT-TDQFKCSGCGKSNCS---------YHQMQTRSA--DEPMTTYVTC 305
C +P+ GT TD+ KC C K NC + R+A DE M TYV C
Sbjct: 292 CIQEHCLPQMVDGTQTDKIKCRRCEKFNCKVTVIARGALFLPSWVRNANPDEQMMTYVIC 351
Query: 306 AECNKRW 312
EC ++W
Sbjct: 352 NECGEQW 358
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERV 189
A+ KPS ADQ + S+R ++ L + L+ D + +V +VA +E+
Sbjct: 899 AAASKPS-ADQIRQSVRHSLKDILMRRLT--------DSNL--KVPEEKAAKVATKIEKE 947
Query: 190 MFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--- 246
+F R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 948 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1007
Query: 247 -RRQEN 251
RR+EN
Sbjct: 1008 WRRREN 1013
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ + +L + + D + +V +VA +E+ +F R K K+R
Sbjct: 918 DQIRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYR 975
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 976 SLMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELASKELAAWRRREN 1024
>gi|407425373|gb|EKF39382.1| transcription elongation factor, putative [Trypanosoma cruzi
marinkellei]
Length = 287
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
R ++ N+ D KN LR ++ G + E L M+ +L + E R+ EE K ++
Sbjct: 174 FRVLLVNLRDAKNTKLREDIIEGRLPVELLVHMSERDLLNPEARKSQEEEFLKRSKDTDL 233
Query: 265 PEKKKGTTDQ---FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E ++ + F C C +CS+ Q QTRSADEPMT + C C+ +W+
Sbjct: 234 TEIRRAMATKSTLFSCPSCKARDCSWTQKQTRSADEPMTVFCICNVCDYKWR 285
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR ++++L + + D + ++ +VA +ER +F R K K+R
Sbjct: 933 DQIRHSVKQSLKEILMKRLTDSSL--KIPEERAAKVATRIERELFSFFRDTDSKYKNKYR 990
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E R++EN
Sbjct: 991 SLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQREN 1039
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%)
Query: 156 ALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDE 215
LS V +D E + DP+ +A+ +E +F+ R + K K RS++FN+ D+
Sbjct: 331 GLSWVLEPVSDFGENEPQKSFEDPELLASKIELELFKLFRGVNKKYKEKGRSLLFNLKDK 390
Query: 216 KNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
NP+LR V+ G+++PERL MT EELAS E Q
Sbjct: 391 NNPELRESVMSGKISPERLCNMTAEELASKELSQ 424
>gi|340058665|emb|CCC53025.1| putative transcription elongation factor [Trypanosoma vivax Y486]
Length = 230
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK--- 261
R ++ N+ D KN +LR ++ G + E L M EL + E R+ E A F+ +
Sbjct: 117 FRVLLVNIRDTKNEELRSDIIEGRLPVEVLVRMNERELLNPEERKNQE---AAFLERSKD 173
Query: 262 ---CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
E+ + F+C C +CS+ Q QTRSADEPMT + C C+ +W
Sbjct: 174 TDLTEIRRAMATKSTLFQCPSCKARDCSWTQKQTRSADEPMTVFCHCNVCDTKW 227
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK 204
+R +RK L +LS +A D D VK ++A +E +F+ + G K K
Sbjct: 812 VRINVRKVLRDSLSNRCKDADDISLSGDEVK-----RMAVRIEEELFKYFKDTGTKYKSK 866
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQENEEI 254
+RS++FN+ D +N L R++L G++ P++L MTPEELAS E R +EN+ +
Sbjct: 867 YRSLVFNIKDTRNQGLFRKILKGKIAPDKLVRMTPEELASKELAKWRERENQHV 920
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 155 KALSRVASEAADDEEITDRVK--ARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
K +S +E D +E+ + + + P+ +A +E +F+ + K K RS++FN+
Sbjct: 379 KEISTAKNENLDGKEVVNEGQKTVQSPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNL 438
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
D NP+LR RV+ GE++PERL +MT EELAS E
Sbjct: 439 KDRNNPELRERVVAGEISPERLCSMTAEELASKE 472
>gi|290973573|ref|XP_002669522.1| hypothetical protein NAEGRDRAFT_82114 [Naegleria gruberi]
gi|284083071|gb|EFC36778.1| hypothetical protein NAEGRDRAFT_82114 [Naegleria gruberi]
Length = 176
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 264 VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ +K + FKC+ C + C+Y+Q+QTRS+DEPMTT++TC C RWK
Sbjct: 126 IIDKPAAVSSTFKCTKCQSTQCTYYQLQTRSSDEPMTTFITCLNCGNRWK 175
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 150 RKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIM 209
+K++E A + E D E + RDP+ +A+ +E +F+ + K K RS++
Sbjct: 254 KKEIEAAQTPHGQEHID--EYVGKEVVRDPRVLASEIEAELFKLFGGVNKKYKEKGRSLL 311
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
FN+ D NP+LR +V+ GE+ P RL +MT EELAS E
Sbjct: 312 FNLKDRNNPELREKVMSGEIPPGRLCSMTAEELASKE 348
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 173 RVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
RV+ PK +A+ +E +F+ + K K RS++FN+ D NP+LR RV+ G++ PE
Sbjct: 357 RVEVPLPKLLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDHNNPELRERVMFGKIPPE 416
Query: 233 RLATMTPEELASDERRQ 249
+L +MT EELAS E Q
Sbjct: 417 QLCSMTAEELASKELSQ 433
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 155 KALSRVASEAADDEEITDRVK--ARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNM 212
K +S +E D +E+ + + + P+ +A +E +F+ + K K RS++FN+
Sbjct: 379 KEISTAKNENLDGKEVVNEGQKTVQSPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNL 438
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
D NP+LR RV+ GE++PERL +MT EELAS E
Sbjct: 439 KDRNNPELRERVVAGEISPERLCSMTAEELASKE 472
>gi|189514890|ref|XP_001919157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Danio rerio]
Length = 394
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 12/119 (10%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ + NP LR+ ++ G++TP+ A M+ EE+A ++ R+ E + + + ++P
Sbjct: 268 RSKVANLKNPNNPHLRQGLISGQLTPDAFAQMSVEEMAGEKLRRLRETYTSLAISEHQLP 327
Query: 266 EKKKGT-TDQFKCSGCGKSNCSYHQM-----------QTRSADEPMTTYVTCAECNKRW 312
E KGT T++ +C C +C Q+ Q+ SAD T++TCA C ++W
Sbjct: 328 ETVKGTPTNKVRCRQCDSMDCRVTQISRGTLFLPSWVQSGSADNDSMTFMTCANCGEQW 386
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ ++ +L + + D + ++ +VA +E+ +F R K K+R
Sbjct: 82 DQIRQSVKHSLKDILMKRLTDSNL--KIPEERASKVAMKIEKELFSFFRDTDAKYKNKYR 139
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 140 SLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 188
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 179 PKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
P+ +A +E +F+ + K K RS++FN+ D NP+LR RV+ GE+TPERL +MT
Sbjct: 369 PESLALKIEEELFKLFSGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEITPERLCSMT 428
Query: 239 PEELASDE 246
EELAS E
Sbjct: 429 AEELASKE 436
>gi|71424226|ref|XP_812723.1| transcription elongation factor-like protein [Trypanosoma cruzi
strain CL Brener]
gi|70877539|gb|EAN90872.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi]
Length = 477
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%)
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ DERR E I + ++ T FKC CGK+ CSY++ QTRSADEP T
Sbjct: 404 MTEDERRMEEARITKMIEDQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTTK 463
Query: 302 YVTCAECNKRW 312
+VTC EC W
Sbjct: 464 FVTCLECKYVW 474
>gi|71409051|ref|XP_806892.1| transcription elongation factor S-II [Trypanosoma cruzi strain CL
Brener]
gi|70870766|gb|EAN85041.1| transcription elongation factor S-II, putative [Trypanosoma cruzi]
Length = 477
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%)
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ DERR E I + ++ T FKC CGK+ CSY++ QTRSADEP T
Sbjct: 404 MTEDERRMEEARITKMIEEQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTTK 463
Query: 302 YVTCAECNKRW 312
+VTC EC W
Sbjct: 464 FVTCLECKYVW 474
>gi|407866945|gb|EKG08471.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi]
Length = 477
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%)
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ DERR E I + ++ T FKC CGK+ CSY++ QTRSADEP T
Sbjct: 404 MTEDERRMEEARITKMIEDQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTTK 463
Query: 302 YVTCAECNKRW 312
+VTC EC W
Sbjct: 464 FVTCLECKYVW 474
>gi|407393614|gb|EKF26679.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi marinkellei]
Length = 477
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%)
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
+ DERR E I + ++ T FKC CGK+ CSY++ QTRSADEP T
Sbjct: 404 MTEDERRMEEARITKMIEDQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTTK 463
Query: 302 YVTCAECNKRW 312
+VTC EC W
Sbjct: 464 FVTCLECKYVW 474
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 15/122 (12%)
Query: 134 KPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEK 193
KPS ADQ + S+R ++ L K L+ E +V +VA +E+ +F
Sbjct: 903 KPS-ADQIRQSVRHSLKDILMKRLT----------ESNLKVPEEKAAKVATKIEKELFSF 951
Query: 194 LRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQ 249
R K K+RS+MFN+ D KN L ++VL GEVTP+ L M+ EELAS E RR+
Sbjct: 952 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSSEELASKELAAWRRR 1011
Query: 250 EN 251
EN
Sbjct: 1012 EN 1013
>gi|348541331|ref|XP_003458140.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Oreochromis niloticus]
Length = 323
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 12/144 (8%)
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
++A +ER + E V K RS + N+ + K+ L + +L G ++PE A M+ E
Sbjct: 172 ELARDIERHVHELHNHNQVKYKACVRSKVANLRNPKSGHLHQGLLSGSLSPEAFARMSAE 231
Query: 241 ELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCSYHQ---------- 289
++AS E RQ EE ++ + + ++P+ +GT T++ +C CG S+C Q
Sbjct: 232 DMASAELRQLREEYSSQGVSERQLPQGIEGTRTEKIRCKRCGGSDCRVTQVSRGVLFLPA 291
Query: 290 -MQTRSADEPMTTYVTCAECNKRW 312
++ DE T+VTC+ C ++W
Sbjct: 292 WVRQGGPDEDAMTFVTCSGCGQQW 315
>gi|410926740|ref|XP_003976831.1| PREDICTED: transcription elongation factor A protein 2-like,
partial [Takifugu rubripes]
Length = 167
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 233 RLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQT 292
+L + +E+AS E +Q E + + + + ++ + TD F C+ C +CSY Q+Q
Sbjct: 87 KLFPASTQEMASAELKQIREALTKESIREHQLSKVGGTETDMFICNNCHGKSCSYTQVQI 146
Query: 293 RSADEPMTTYVTCAECNKRWK 313
RSADEPMTT+V C C RWK
Sbjct: 147 RSADEPMTTFVLCNSCGNRWK 167
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 147 DKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
D+IR+ + +L + + D + +V +VA +E+ +F R K K+R
Sbjct: 10 DQIRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYR 67
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
S+MFN+ D KN L ++VL GEVTP+ L M+PEELAS E
Sbjct: 68 SLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 107
>gi|312599164|gb|ADQ91187.1| hypothetical protein BpV2_020c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 171
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL----ASDERRQEN--E 252
+ KH + + +P L++R+L GE+ P+ + ++ + L + +EN +
Sbjct: 53 FVNRYKHTFLKIKHNLIHSPTLKKRILSGELKPKSVLDLSHQGLWPGGPYSKLLEENIRQ 112
Query: 253 EIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+K ++ + KG F+C+ C +++QMQTRSADEPMT +VTC CN RW
Sbjct: 113 NMKKDWVTNMINDPEYKG---MFRCNRCKSYKTTFYQMQTRSADEPMTVFVTCHNCNSRW 169
Query: 313 K 313
K
Sbjct: 170 K 170
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 164 AADDEEITDR----VKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPD 219
+A+DEE D+ KA D +A VE +F+ + K K RS++FN+ D+ NP+
Sbjct: 328 SANDEEAIDKDSIIQKADD---LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPE 384
Query: 220 LRRRVLIGEVTPERLATMTPEELASDE 246
LR RVL G++TP+RL +MT EELAS E
Sbjct: 385 LRERVLSGDITPDRLCSMTAEELASKE 411
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 152 DLEKALSRVASE---AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSI 208
D+E R+ S A D+E+ R ++ +A +E +F+ R + K K RS+
Sbjct: 311 DVESESKRIKSANELAMDEEKFNQRAES-----LAFRIEEELFKLFRGVNKKYKEKGRSL 365
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
+FN+ D+ NP+LR RVL G++ PERL +MT EELAS E
Sbjct: 366 LFNLKDKSNPELRERVLSGDIAPERLCSMTAEELASKE 403
>gi|171473978|gb|AAW27827.2| SJCHGC09118 protein [Schistosoma japonicum]
Length = 309
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 41/265 (15%)
Query: 66 CEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQT-SDSNAVKSGCSTAK 124
CE V + H + L ET + G LS +Q S S ++ S
Sbjct: 60 CEHV------VFHTGSEDRTLKNETKCGRAKGEGLS---SWQAAGDSSSGSIFPTLSKQS 110
Query: 125 EKKATASIRKPSHADQAKD-SMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVA 183
E AT S+ P + D S+R K + L AL S+ A+ +
Sbjct: 111 EPPATTSLDTPPLCKDSSDLSLRTKCIQLLHGALDPETSKEAEGK--------------T 156
Query: 184 ASVERVMFEKLRPMGVAEKRKH----RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
A + RV+ + + A + K+ RS + N+ + KN LR +L G + PE A M+
Sbjct: 157 ADLARVIEVHIHALHHANQAKYKACIRSKVTNLRNPKNGHLRCGLLGGSLGPEVFARMSL 216
Query: 240 EELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCSYHQ--------- 289
EE+A++E ++ EE ++ + + ++P+ +GT T + +C C S+C Q
Sbjct: 217 EEMANEELQRLREEYSSQGVSERQLPQGVEGTPTQKLRCRRCDGSDCRVTQVSRGTLFLP 276
Query: 290 --MQTRSADEPMTTYVTCAECNKRW 312
++ +AD+ T+VTC+ C ++W
Sbjct: 277 AWVRQATADQDAMTFVTCSRCGEQW 301
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 164 AADDEEITDR----VKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPD 219
+A+DEE D+ KA D +A VE +F+ + K K RS++FN+ D+ NP+
Sbjct: 328 SANDEEAIDKDSIIQKADD---LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPE 384
Query: 220 LRRRVLIGEVTPERLATMTPEELASDE 246
LR RVL G++TP+RL +MT EELAS E
Sbjct: 385 LRERVLSGDITPDRLCSMTAEELASKE 411
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%)
Query: 176 ARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLA 235
A + + +A +E +++ K++ R+ + N+ D NP+LR VL+G V P++LA
Sbjct: 5 AYESEFLAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLA 64
Query: 236 TMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQM 290
+MT EE+AS E ++ E+ + + ++ TD KC C ++ C+Y+Q+
Sbjct: 65 SMTSEEMASKEMKELREKYTKETIEDHQMAVTGGTETDLLKCGKCKQNKCTYNQL 119
>gi|310831288|ref|YP_003969931.1| putative transcription elongation factor TFIIS [Cafeteria
roenbergensis virus BV-PW1]
gi|309386472|gb|ADO67332.1| putative transcription elongation factor TFIIS [Cafeteria
roenbergensis virus BV-PW1]
Length = 157
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 189 VMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE-- 246
MFE ++ KH +I + NP L + G++ PE +A + PEE+ ++
Sbjct: 43 FMFENFYQDKFSDIIKHLNI------KNNPYLLEAIKTGKIKPENIAFLKPEEIYPEKFE 96
Query: 247 ----RRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTY 302
+R+ + IK + TTD FKC C K Q Q R+ DEPMTT+
Sbjct: 97 AILNKRKLEKAIK-----------DNQATTDAFKCPRCKKRKAKIDQKQIRAGDEPMTTF 145
Query: 303 VTCAEC 308
VTC EC
Sbjct: 146 VTCVEC 151
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 177 RDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+DP+ +A+ +E +F+ + K K RS++FN+ D NP+LR +V+ GE+TP RL +
Sbjct: 389 QDPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCS 448
Query: 237 MTPEELASDE 246
MT EELAS E
Sbjct: 449 MTAEELASKE 458
>gi|313768016|ref|YP_004061447.1| hypothetical protein BpV1_017c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599623|gb|ADQ91644.1| hypothetical protein BpV1_017c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 171
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL----ASDERRQEN--E 252
+ KH + + +P L+ R+L GE+ P+ + ++ + L + +EN +
Sbjct: 53 FVNRYKHTFLKIKHNLIHSPTLKERILSGELKPKSVLELSHQGLWPGGPYSKLLEENIRQ 112
Query: 253 EIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+K ++ + KG F+C+ C +++QMQTRSADEPMT +VTC CN RW
Sbjct: 113 NMKKDWVTNMINDPEYKG---MFRCNRCKSYKTTFYQMQTRSADEPMTVFVTCHNCNSRW 169
Query: 313 K 313
K
Sbjct: 170 K 170
>gi|327268236|ref|XP_003218904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Anolis carolinensis]
Length = 350
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 62/337 (18%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKH-PCEKVQNAASELLHIWKQ- 82
SE + Q L +L+ +T D L T V K++ + ++ P ++ A LL WK
Sbjct: 19 SERKYQDIVIHLTYLETADITIDDLQETDVAKAVFRVSQNCPSVVLKKKAKHLLSKWKAI 78
Query: 83 ---------KIVLGKETNGNKRNGSKLSVDE------KFQKQTSDSNA------------ 115
++ LG N N+ +G V E K +Q +A
Sbjct: 79 YKKHCSPSVQLHLGLSENANEDSGHIQVVSEDVNSIGKLNQQDKLCSASPSLASESPSSN 138
Query: 116 ----VKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEIT 171
V+ +T + +SI + ++R K + L +AL+ + +EEI
Sbjct: 139 PSSCVQKDNTTQPDLGNGSSISETGQQHGPIMAVRGKCTQLLFEALT---DSSTSNEEIA 195
Query: 172 DRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH----RSIMFNMSDEKNPDLRRRVLIG 227
Q A +E+ +F + RK+ RS + N+ + KN L+ + IG
Sbjct: 196 KH------HQTAEEIEQHIF----ALHAGNDRKYKNSIRSKVSNLKNPKNYHLKHSLHIG 245
Query: 228 EVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCS 286
++P+ A M+ E+A DE +Q + + ++P++ GT T++ KC C K NC+
Sbjct: 246 VLSPQTFAGMSAVEMAHDELKQLRASYTKSAVQEHQLPQRISGTLTNKIKCRRCEKFNCT 305
Query: 287 Y-----------HQMQTRSADEPMTTYVTCAECNKRW 312
+++ DE M TYV C EC ++W
Sbjct: 306 VTVIARGALFLPGWVRSTDPDEQMMTYVICNECGEQW 342
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 156 ALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDE 215
LS V +D E + DP+ +A+ +E +F+ + K K RS++FN+ D+
Sbjct: 337 GLSWVLEPVSDFGENETQKSFEDPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDK 396
Query: 216 KNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
NP+LR V+ G+++PERL MT EELAS E Q
Sbjct: 397 NNPELRESVMSGKISPERLCNMTAEELASKELSQ 430
>gi|71755313|ref|XP_828571.1| transcription elongation factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70833957|gb|EAN79459.1| transcription elongation factor, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 213
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 175 KARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPER 233
K D +VA R++ K P G +E R ++ ++ D KN +LR ++ + + E
Sbjct: 71 KEEDEGRVADMALRIV--KAIPGGRSESADTFRMLLVHLGDAKNRELRESIIEEKFSVEV 128
Query: 234 LATMTPEELASDERRQENEEIKAKFMFK------CEVPEKKKGTTDQFKCSGCGKSNCSY 287
L M +L + E R+ E A F+ + E+ + T+ F C C NC++
Sbjct: 129 LVRMKERDLLNPEERERQE---AAFLARSRDTDLTEIRKATSTTSTLFPCPSCKAKNCTW 185
Query: 288 HQMQTRSADEPMTTYVTCAECNKRWK 313
Q QTRSADEPMT + C C +W+
Sbjct: 186 TQKQTRSADEPMTIFCICNICEHKWR 211
>gi|261334448|emb|CBH17442.1| transcription elongation factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 213
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 175 KARDPKQVAASVERVMFEKLRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTPER 233
K D +VA R++ K P G +E R ++ ++ D KN +LR ++ + + E
Sbjct: 71 KEEDEGRVADMALRIV--KAIPGGRSESADTFRMLLVHLGDAKNRELRESIIEEKFSVEV 128
Query: 234 LATMTPEELASDERRQENEEIKAKFMFK------CEVPEKKKGTTDQFKCSGCGKSNCSY 287
L M +L + E R+ E A F+ + E+ + T+ F C C NC++
Sbjct: 129 LVRMKERDLLNPEERERQE---AAFLARSRDTDLTEIRKATSTTSTLFPCPSCKAKNCTW 185
Query: 288 HQMQTRSADEPMTTYVTCAECNKRWK 313
Q QTRSADEPMT + C C +W+
Sbjct: 186 TQKQTRSADEPMTIFCICNICEHKWR 211
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 164 AADDEEITDR----VKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPD 219
+A+DEE D+ KA D +A +E +F+ + K K RS++FN+ D+ NP+
Sbjct: 3 SANDEEAIDKDSIIQKADD---LAVRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPE 59
Query: 220 LRRRVLIGEVTPERLATMTPEELASDE 246
LR RVL G++TP+RL +MT EELAS E
Sbjct: 60 LRERVLSGDITPDRLCSMTAEELASKE 86
>gi|157833931|pdb|1TFI|A Chain A, A Novel Zn Finger Motif In The Basal Transcriptional
Machinery: Three-Dimensional Nmr Studies Of The Nucleic-
Acid Binding Domain Of Transcriptional Elongation Factor
Tfiis
Length = 50
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 267 KKKGT-TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
K GT TD F C C K NC+Y Q+QTRSADEPMTT+V C EC RWK
Sbjct: 1 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 48
>gi|281206908|gb|EFA81092.1| hypothetical protein PPL_05928 [Polysphondylium pallidum PN500]
Length = 79
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
++D F C CGK C+Y Q+QTRSAD+P+TT+VTC CN RW
Sbjct: 15 SSDLFTCPKCGKRKCTYFQLQTRSADDPLTTFVTCVTCNNRW 56
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 156 ALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDE 215
LS V +D E + DP+ +A+ +E +F+ + K K RS++FN+ D+
Sbjct: 337 GLSWVLEPVSDFGENETQKSFEDPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDK 396
Query: 216 KNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
NP+LR V+ G+++PERL MT EELAS E Q
Sbjct: 397 NNPELRESVMSGKISPERLCNMTAEELASKELSQ 430
>gi|296470438|tpg|DAA12553.1| TPA: TFIIS central domain-containing protein 1-like [Bos taurus]
Length = 377
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 132/337 (39%), Gaps = 66/337 (19%)
Query: 30 QRCADALKH----LQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWK--- 81
QR + L H L+ VT + L T V +++ R LK P ++ A LL WK
Sbjct: 45 QRSFEELGHHLTVLETLHVTPEHLQETGVVRAVYRVLKNCPTGALKQKAKRLLSEWKVLY 104
Query: 82 -----------QKIVLGKETNGNK-----------RNGSKLSVDEKFQKQ----TSDSNA 115
++ LG N+ R GS+ + F Q ++
Sbjct: 105 KDTLCKPEGSPKRFPLGGSQEENRVLPPDPHQEEVRGGSR--YNSLFTSQDVAGAVETIV 162
Query: 116 VKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVK 175
+ C + + K S R P D A + +D+I V A E + + +
Sbjct: 163 PEDSCGSVEPKAVPLSARDPQSTDLAANGQQDRI----------VPVRARCTELLYEALT 212
Query: 176 ARDPKQVAASVERVMFEKLRPMGVAEKRKH--------RSIMFNMSDEKNPDLRRRVLIG 227
A P Q A V + +++ A K+ RS + N+ N L++ +L G
Sbjct: 213 ASSPGQPRAHVWPNLAQEIEAHVFALHPKNLQKYKTCIRSKVANLKKPHNSHLQQNLLSG 272
Query: 228 EVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCS 286
++P A MT E+AS E +Q + K +P+ +GT T + KC C K NC
Sbjct: 273 TMSPREFAEMTAMEMASQELKQLRASYMKSALRKHYLPQVVEGTPTRKIKCERCEKFNCQ 332
Query: 287 ---------YHQMQTRSA--DEPMTTYVTCAECNKRW 312
+ R+A DE M TYV C EC ++W
Sbjct: 333 VTVIPRGTLFLPSWVRNAGPDEEMMTYVICNECGEQW 369
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 164 AADDEEITDR----VKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPD 219
+A+DEE D+ KA D +A VE +F+ + K K RS++FN+ D+ NP+
Sbjct: 3 SANDEEAIDKDSIIQKADD---LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPE 59
Query: 220 LRRRVLIGEVTPERLATMTPEELASDE 246
LR RVL G++TP+RL +MT EELAS E
Sbjct: 60 LRERVLSGDITPDRLCSMTAEELASKE 86
>gi|313844000|ref|YP_004061663.1| hypothetical protein OlV1_030c [Ostreococcus lucimarinus virus
OlV1]
gi|312599385|gb|ADQ91407.1| hypothetical protein OlV1_030c [Ostreococcus lucimarinus virus
OlV1]
gi|357541718|gb|AET84480.1| hypothetical protein OLOG_00014 [Ostreococcus lucimarinus virus
OlV4]
Length = 178
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD-ERRQENEEIKAKFMFKC 262
KH+ + + + + L+ ++ +V + M PE+L D + +E K + K
Sbjct: 67 KHKFLQIQHNLKNSSVLKDWIITKKVKTREVIDMRPEDLWPDGPYATKMQERMYKEIRKA 126
Query: 263 EVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+ ++ K F C+ C +Y+Q+QTRSADEPMTT+V+C C++ WKC
Sbjct: 127 YLAQEVKNQEGFFTCARCKSKKTTYYQLQTRSADEPMTTFVSCLNCDRNWKC 178
>gi|154344264|ref|XP_001568076.1| transcription elongation factor-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065410|emb|CAM40841.1| transcription elongation factor-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 474
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 220 LRRRVLIGEVTPERLATMTPEELAS-DERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+R +L GE TP++ E + E+ ++ + I+ K + T FKC
Sbjct: 378 IRDNLLSGEWTPKKYLDQPNEVFTTKSEKARQEQRIQEKIKAIEAADNARLNITALFKCG 437
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
CGK +C++++ QTRSADEP T Y+TC +C W
Sbjct: 438 RCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 471
>gi|395526959|ref|XP_003765621.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sarcophilus harrisii]
Length = 352
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 133/331 (40%), Gaps = 52/331 (15%)
Query: 26 EPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKH-PCEKVQNAASELLHIWKQKI 84
E Q D L L+ + + L T V +++ + KH P + A LL WK
Sbjct: 22 EKNFQDLGDHLTELETIQINLEHLQETDVVRAVYRVLKHCPIVIFKTKARCLLSKWK--- 78
Query: 85 VLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDS 144
L K N S +++ +K T N + S ++ ++ T I + ++D
Sbjct: 79 TLYKNHYFQPINSSNFYLEDSKEK-TEHVNLGQEENSPSQSQEQTLDIANSNSVLLSQDV 137
Query: 145 MRDKIRKDLEKALSRVASEAADDEEI---------------------------TDRVKAR 177
+D E + + V + D + I TD+ K
Sbjct: 138 AKDNKLFVPENSAAPVEEHSEDPKSIGSKSTWHQDPTRAKCVELLYGALVSYATDQQKTD 197
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
+++A +E +F K RS + N+ ++KN L++ + G ++P+ A M
Sbjct: 198 HCQKLAKEIEGHIFALYSKNLKKYKNCIRSKLSNLKNQKNSHLQQNLFSGALSPKEFAEM 257
Query: 238 TPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNCS------ 286
T E+A+DE +Q ++A + C P+ GT T++ KC C K NC
Sbjct: 258 TVMEMANDELKQ----LRASYTKSCIQEHYFPQAIDGTQTNKIKCRRCEKFNCKVTVIAR 313
Query: 287 ---YHQMQTRSA--DEPMTTYVTCAECNKRW 312
+ RSA DE M TYV C EC ++W
Sbjct: 314 GILFLPSWVRSANPDEQMMTYVICNECGEQW 344
>gi|440494389|gb|ELQ76770.1| Transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein Sp1 [Trachipleistophora hominis]
Length = 181
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 13/113 (11%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ-ENEEIKAKF----MF 260
RS N+ D+ N DL + G + M+ +E+ S RR +N+ IK+ +
Sbjct: 76 RSKYLNLKDKSN-DLCVGIYEGRIGVHEFLLMSMDEMKSKARRSSDNDLIKSSIEGSQIA 134
Query: 261 KCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ EV TD F C C + C Y Q+QTRSADEPMTTYV C +C WK
Sbjct: 135 QMEVE------TDIFFCFKCKQRKCRYRQIQTRSADEPMTTYVFC-KCGNTWK 180
>gi|167386526|ref|XP_001737794.1| transcription elongation factor S-II [Entamoeba dispar SAW760]
gi|165899246|gb|EDR25885.1| transcription elongation factor S-II, putative [Entamoeba dispar
SAW760]
Length = 171
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 198 GVAEKRKHRSIMFNM-------SDEKNPDLRRRVLIGEVTPERLATMTPEELASD----- 245
G+A K K + FN KN L + ++TP L M+P+++A +
Sbjct: 45 GLAIKYKEDNEKFNFHLRQILAGLRKNKKLVDSLCSKKITPNELIEMSPDDMADETVKEI 104
Query: 246 -ERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVT 304
ER ++EE K K + ++P+ +++FKCS CG QTRSADEPMT ++T
Sbjct: 105 KERIIKDEEDKKKPIDISKIPD-----SNEFKCSKCGSRKIQETLAQTRSADEPMTRFLT 159
Query: 305 CAECNKRWK 313
CA C WK
Sbjct: 160 CASCGFFWK 168
>gi|157875290|ref|XP_001686044.1| transcription elongation factor-like protein [Leishmania major
strain Friedlin]
gi|68129117|emb|CAJ06790.1| transcription elongation factor-like protein [Leishmania major
strain Friedlin]
Length = 473
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 220 LRRRVLIGEVTPERLATMTPEELAS-DERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+R +L GE TP++ E + E+ ++ + I+ K T FKC
Sbjct: 377 IRDHLLSGEWTPKKYLDQPSEVFTTKSEKARQEQRIQEKMKAIEAADNAMLNITSLFKCG 436
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
CGK +C++++ QTRSADEP T Y+TC +C W
Sbjct: 437 RCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 470
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 176 ARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLA 235
+ P+ +A +E +F+ + K K RS++FN+ D NP+LR RV+ GE++PERL
Sbjct: 384 VQSPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLC 443
Query: 236 TMTPEELASDE 246
+MT EELAS E
Sbjct: 444 SMTAEELASKE 454
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
DS+RDK + L AL ADD+ V ++A+ +E ++++L+ + +
Sbjct: 26 DSVRDKCVEMLSAALK------ADDDYKDYGVNC---DKMASEIEDHIYQELKSTDMKYR 76
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+ RS + N+ D +NP LRR VL G ++ +A MT EE+ASDE R+ + + + +
Sbjct: 77 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREH 136
Query: 263 EVPEKKKGTTDQFKCSGC 280
++ + TTD F+CS C
Sbjct: 137 QMAKTGGTTTDLFQCSKC 154
>gi|9857927|gb|AAG00938.1|AF272555_1 transcription elongation factor TFIIS [Moneuplotes crassus]
Length = 328
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 55/320 (17%)
Query: 29 VQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKI---- 84
+Q D + ++ + V D+L +T GK + + ++++ AA +L+ WK +I
Sbjct: 28 IQEKIDTINYMGEYRVNRDILKTTLAGKKMTTWSRSKNKEIKEAAKRVLNEWKTQIKGVN 87
Query: 85 ---------VLGKETNGNKRNGSKLSVDEKF----QKQTSDSNAVKSGCSTAKEKKATAS 131
T ++ S+ +EK D + S S + +
Sbjct: 88 KSSGSSGKSTRSGSTQSQNKSLSEKGAEEKGLVHPDSVVPDDSKPNSNSSEDENEGKDDE 147
Query: 132 IRKPSHA---------DQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
+ P ++ +D +R+ IRK LEK L + +PK+
Sbjct: 148 TKSPEDEEDYDEFILNNETEDKVRNGIRKGLEKLLCK---------------SNENPKKC 192
Query: 183 AASVERVMFEKLRPMGVAEK---RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
A ++ + +G K K RSI+ N+ +++ + R +++ G TP+ LA M P
Sbjct: 193 KALSIKIENSVVLRLGTHLKEYTNKCRSIIANL--QRSDEFRSKIINGIFTPDDLAAMNP 250
Query: 240 EELASDERRQENEEIKAKFM------FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTR 293
+ D +++ + + + + + + K+G + C C ++++ QTR
Sbjct: 251 RDFLEDSLKKKRAKKETRIIDSKRSDYILANSKIKEG---MYTCEKCKSKKTTFYEQQTR 307
Query: 294 SADEPMTTYVTCAECNKRWK 313
SADEPMTT+V C C+ K
Sbjct: 308 SADEPMTTFVQCLMCSHNMK 327
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 166 DDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVL 225
D ++ P+ VA+++E ++ + K K RS++FN+ D NP+LR RV+
Sbjct: 378 DSSHVSGGQAVPSPQTVASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVM 437
Query: 226 IGEVTPERLATMTPEELASDE 246
GE+ PE+L +MT EELAS E
Sbjct: 438 SGEIPPEKLCSMTAEELASKE 458
>gi|9857929|gb|AAG00939.1|AF272556_1 transcription elongation factor TFIIS [Moneuplotes crassus]
Length = 324
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 55/320 (17%)
Query: 29 VQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKI---- 84
+Q D + ++ + V D+L +T GK + + ++++ AA +L+ WK +I
Sbjct: 24 IQEKIDTINYMGEYRVNRDILKTTLAGKKMTTWSRSKNKEIKEAAKRVLNEWKTQIKGVN 83
Query: 85 ---------VLGKETNGNKRNGSKLSVDEKF----QKQTSDSNAVKSGCSTAKEKKATAS 131
T ++ S+ +EK D + S S + +
Sbjct: 84 KSSGSSGKSTRSGSTQSQNKSLSEKGAEEKGLVHPDSVVPDDSKPNSNSSEDENEGKDDE 143
Query: 132 IRKPSHA---------DQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQV 182
+ P ++ +D +R+ IRK LEK L + +PK+
Sbjct: 144 TKSPEDEEDYDEFILNNETEDKVRNGIRKGLEKLLCK---------------SNENPKKC 188
Query: 183 AASVERVMFEKLRPMGVAEK---RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
A ++ + +G K K RSI+ N+ +++ + R +++ G TP+ LA M P
Sbjct: 189 KALSIKIENSVVLRLGTHLKEYTNKCRSIIANL--QRSDEFRSKIINGIFTPDDLAAMNP 246
Query: 240 EELASDERRQENEEIKAKFM------FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTR 293
+ D +++ + + + + + + K+G + C C ++++ QTR
Sbjct: 247 RDFLEDSLKKKRAKKETRIIDSKRSDYILANSKIKEG---MYTCEKCKSKKTTFYEQQTR 303
Query: 294 SADEPMTTYVTCAECNKRWK 313
SADEPMTT+V C C+ K
Sbjct: 304 SADEPMTTFVQCLMCSHNMK 323
>gi|357542240|gb|AET85000.1| transcription elongation factor [Micromonas pusilla virus SP1]
Length = 169
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 13/119 (10%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQE------NEEIK 255
K K S+ N+ ++NP L+ ++ ++ M PE+L D + +EE++
Sbjct: 58 KSKFLSLQSNI--KQNPKLKSDLVEKKLKTFDFVNMRPEKLWPDGPYAKVMEVRIHEEMR 115
Query: 256 AKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWKC 314
+++ K + K F C+ C +Y+Q+QTRSADEPMTT+V+C C+K WKC
Sbjct: 116 KEYLTK-----EMKNQEGFFTCNRCKSKKTTYYQLQTRSADEPMTTFVSCLNCDKNWKC 169
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 179 PKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
P+ +A+ +E +F+ + + K K RS++FN+ D NP+LR RV+ G++ PE+L +MT
Sbjct: 414 PELLASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMT 473
Query: 239 PEELASDERRQ 249
EELAS E Q
Sbjct: 474 AEELASKELSQ 484
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
D++R+K R+ L AL D + + D ++++A +E +F + + K
Sbjct: 10 DAVRNKCREMLTAALQ------TDHDHVA---IGADCERLSAQIEECIFRDVGNTDMKYK 60
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
+ RS + N+ D KNPDLRR VL G +TP+++A MT EE+ASDE ++
Sbjct: 61 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKE 107
>gi|146098158|ref|XP_001468341.1| transcription elongation factor-like protein [Leishmania infantum
JPCM5]
gi|134072708|emb|CAM71425.1| transcription elongation factor-like protein [Leishmania infantum
JPCM5]
Length = 473
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 220 LRRRVLIGEVTPERLATMTPEELAS-DERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+R +L GE TP++ E + E+ ++ + I+ K T FKC
Sbjct: 377 IRDHLLSGEWTPKKYLDQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAMLNITSLFKCG 436
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
CGK +C++++ QTRSADEP T Y+TC +C W
Sbjct: 437 RCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 470
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q ++ +R K+R +++AL VA+EAA + + +P A +VE +F+
Sbjct: 362 QNEEELRQKVRGGIQQALELVATEAAGEAG-----RLPEPAPTAEAVEAALFKLYGGTTK 416
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQENEE 253
K+K R++ FN+ D NPDLR VL G++ P+ MT ELA+ E R+ + EE
Sbjct: 417 DYKQKFRTLQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTATELANKELAAYRKAKEEE 474
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 107 QKQTSDSN--AVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEA 164
++Q++D+ A K+G S +E K A PS A + S+ + IR+ + +L + +
Sbjct: 653 RRQSTDAREAAHKTGVSMKQESKHKA----PSLASKKPVSL-EAIRRSVRDSLKEILIQR 707
Query: 165 ADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRV 224
D ++ + ++A +ER +F + K K+RS+MFN+ D KN L +RV
Sbjct: 708 LKDSDLN--ISVERASELAKKIERELFHLYKDTDNKYKNKYRSLMFNLKDTKNNILCKRV 765
Query: 225 LIGEVTPERLATMTPEELASDE----RRQEN 251
L GE++P L M+PEELAS E R++EN
Sbjct: 766 LKGEISPANLIRMSPEELASKELAAWRQREN 796
>gi|183234876|ref|XP_648942.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169800868|gb|EAL43551.2| hypothetical protein EHI_055430 [Entamoeba histolytica HM-1:IMSS]
gi|407039077|gb|EKE39445.1| transcription factor S-II (TFIIS) domain containing protein
[Entamoeba nuttalli P19]
gi|449704587|gb|EMD44802.1| transcription elongation factor SII, putative [Entamoeba
histolytica KU27]
Length = 171
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 198 GVAEKRKHRSIMFNM-------SDEKNPDLRRRVLIGEVTPERLATMTPEELASD----- 245
G+A K K + FN KN L + +VTP L M+P+++A +
Sbjct: 45 GLAVKYKEDNEKFNFHLRQILAGLRKNKKLVDNLCSKKVTPNELIEMSPDDMADEAVKEI 104
Query: 246 -ERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVT 304
ER ++EE K K + ++P+ ++FKC CG QTRSADEPMT ++T
Sbjct: 105 KERIIKDEEDKKKPIDISKIPD-----NNEFKCGKCGSRKIQETLAQTRSADEPMTRFLT 159
Query: 305 CAECNKRWK 313
CA C WK
Sbjct: 160 CASCGFFWK 168
>gi|401428110|ref|XP_003878538.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494786|emb|CBZ30089.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 476
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 220 LRRRVLIGEVTPERLATMTPEELAS-DERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+R +L GE TP++ E + E+ ++ + I+ K T FKC
Sbjct: 380 IRDNLLSGEWTPKKYLDQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAMLNITSLFKCG 439
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
CGK +C++++ QTRSADEP T Y+TC +C W
Sbjct: 440 RCGKRHCTFYEQQTRSADEPTTKYITCLDCKNIW 473
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 124 KEKKATASIRKPSHADQAKDSMRDKIRKDL-----EKALSRVASEAADDEEITDRVKARD 178
K K +++ +KP + + S+RD +++ L E LS +A+D
Sbjct: 639 KSKPPSSATKKPVSVEAIRRSVRDSLKEILIQRLKESNLSISVEKASD------------ 686
Query: 179 PKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
VA +ER +F + K K+RS+MFN+ D KN L ++VL GE++P L M+
Sbjct: 687 ---VAKKIERELFHLNKDTDNKYKNKYRSLMFNLKDTKNNVLYKKVLKGEISPGNLIRMS 743
Query: 239 PEELASDE----RRQEN 251
PEELAS E R++EN
Sbjct: 744 PEELASKELAAWRKREN 760
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
K K RS++FN+ D+ NPDLR RV +GEV+PE+L +MT E+LAS E Q
Sbjct: 3 KEKARSLVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIEQLASKELSQ 50
>gi|332223857|ref|XP_003261084.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Nomascus
leucogenys]
Length = 381
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + KN L++
Sbjct: 213 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKDIKKYKTCIRSKVANLKNPKNSHLQQN 272
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G ++P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 273 LLSGTMSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 328
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
CGK NC ++ + DE M TYV C EC ++W
Sbjct: 329 RCGKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 373
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 152 DLEKALSRVASE---AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSI 208
D+E R+ S A D E+ R ++ +A +E +F+ + K K RS+
Sbjct: 313 DVESESKRIKSANELAMDTEKFNQRAES-----LAFRIEEELFKLFGGVNKKYKEKGRSL 367
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
+FN+ D+ NP+LR RVL G++ PERL +MT EELAS E
Sbjct: 368 LFNLKDKSNPELRERVLSGDIAPERLCSMTAEELASKE 405
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 179 PKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMT 238
P+ +A+ +E +F+ + K K RS++FN+ D NP+LR RV+ G++ PE+L +MT
Sbjct: 393 PELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKILPEQLCSMT 452
Query: 239 PEELASDE 246
EELAS E
Sbjct: 453 AEELASKE 460
>gi|332223859|ref|XP_003261085.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Nomascus
leucogenys]
gi|441673101|ref|XP_004092410.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Nomascus leucogenys]
Length = 351
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + KN L++
Sbjct: 183 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKDIKKYKTCIRSKVANLKNPKNSHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G ++P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTMSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
CGK NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCGKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 2 EKKLVTLFGAAKKAADAAAATNRSEP-EVQRCADALKHLQAFPVTYDLLVSTQVGKSLRH 60
E +LV+ F A KAAD A + P E RC + LK + A V+ LL+STQVGK LR
Sbjct: 3 EAELVSFFEKACKAADRAVSNGAILPAEEVRCQETLKAMGAVEVSTALLLSTQVGKRLRK 62
Query: 61 LKKHPCEKVQNAASELLHIWKQKI 84
L KH K+ +A +LL WK+ +
Sbjct: 63 LTKHQSSKISASAQQLLEEWKKVV 86
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+A +E +F+ + K K RS++FN+ D+ NP+LR RVL G++ PERL +MT EE
Sbjct: 344 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIVPERLCSMTAEE 403
Query: 242 LASDE 246
LAS E
Sbjct: 404 LASKE 408
>gi|149638336|ref|XP_001515301.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ornithorhynchus
anatinus]
Length = 359
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 22/124 (17%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC--- 262
RS + N+ + KN L++ + G +TPE A MT ++ASDE ++ ++A + C
Sbjct: 233 RSKVSNLRNPKNVHLQQNLFSGSLTPEAFAEMTVMDMASDELKR----LRASYTETCVQE 288
Query: 263 -EVPEKKKGT-TDQFKCSGCGKSNCSYHQMQTRSA------------DEPMTTYVTCAEC 308
+P+ +GT T++ KC C KS+C M +R DE M TYV C EC
Sbjct: 289 HHLPQVPEGTQTNKVKCRRCEKSDCKV-TMISRGTLFLPSWVRRANPDEQMMTYVICNEC 347
Query: 309 NKRW 312
++W
Sbjct: 348 GEQW 351
>gi|109129943|ref|XP_001096593.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 1 [Macaca
mulatta]
gi|297303341|ref|XP_002806188.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 2 [Macaca
mulatta]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 130/323 (40%), Gaps = 50/323 (15%)
Query: 33 ADALKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWKQKIVLGKETN 91
+ L L+ VT + L T V +++ R LK P ++N A LL WK + KET+
Sbjct: 27 GNHLTELETIYVTKEHLQETDVVRAVYRVLKNCPSVALKNKAKCLLSKWK---AVYKETH 83
Query: 92 GNKRNGSKL----------------SVDEKFQKQTSDS----NAVKSGCSTAKEKKATAS 131
RN KL S DE +S+S + K E KA
Sbjct: 84 SKARNSPKLFPVRGNEENSGPSHDPSQDETLGICSSNSLSSQDVAKLSEMIVPENKAIQL 143
Query: 132 IRKPSHADQAKDSMRDKIRKDLEKALSRVASE------AADDEEITDRVKARDPKQVAAS 185
K H K +L ++ + ++ AA D+ KA + A
Sbjct: 144 KPKKEHFGDGGPESTGKRLSELLDPITPMRTKCIELLYAALTSSSADQPKADLWQNFARE 203
Query: 186 VERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD 245
+E +F K RS + N+ + KN L++ +L G ++P A MT E+A+
Sbjct: 204 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 263
Query: 246 ERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNCSY-----------HQ 289
E +Q ++A + C +P+ GT T++ KC C K NC
Sbjct: 264 ELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTLFLPSW 319
Query: 290 MQTRSADEPMTTYVTCAECNKRW 312
++ + DE M TYV C EC ++W
Sbjct: 320 VRNSNPDEQMMTYVICNECGEQW 342
>gi|75057265|sp|Q9GMV6.1|TEANC_MACFA RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
gi|9929973|dbj|BAB12143.1| hypothetical protein [Macaca fascicularis]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 129/328 (39%), Gaps = 60/328 (18%)
Query: 33 ADALKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWKQKIVLGKETN 91
+ L L+ VT + L T V +++ R LK P ++N A LL WK + KET+
Sbjct: 27 GNHLTELETIYVTKEHLQETDVVRAVYRVLKNCPSVALKNKAKCLLSKWK---AVYKETH 83
Query: 92 GNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK--------- 142
RN KL F + ++ N+ S + E S S D AK
Sbjct: 84 SKARNSPKL-----FPVRGNEENSGPSHDPSQDETLGICSSNSLSSQDVAKLSEMIVPEN 138
Query: 143 -------------DSMRDKIRKDLEKALSRVAS---------EAADDEEITDRVKARDPK 180
D + K L + L + AA D+ KA +
Sbjct: 139 RAIQLKPKKEHFGDGGPESTGKRLSELLDPITPMRTKCIELLYAALTSSSADQPKADLWQ 198
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
A +E +F K RS + N+ + KN L++ +L G ++P A MT
Sbjct: 199 NFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVM 258
Query: 241 ELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNCSY-------- 287
E+A+ E +Q ++A + C +P+ GT T++ KC C K NC
Sbjct: 259 EMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTL 314
Query: 288 ---HQMQTRSADEPMTTYVTCAECNKRW 312
++ + DE M TYV C EC ++W
Sbjct: 315 FLPSWVRNSNPDEQMMTYVICNECGEQW 342
>gi|50730263|ref|XP_416834.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Gallus gallus]
Length = 359
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 57/339 (16%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWKQ- 82
SE Q D LK L+ +T + L T+V K + R LK P +++ A +LL WK
Sbjct: 19 SENNFQDIEDHLKELEDVSMTVEYLQGTEVAKVVYRILKSCPSAELKKKAKQLLSRWKAL 78
Query: 83 ---------------KIVLGKETNGNKRNG------------------SKLSVDEKFQKQ 109
+ + + T + G SK+ V + K+
Sbjct: 79 YKNNRLQSVQVKKSVSVCVSEATEHLEIPGEQLLSEGPCQQEVLDAVPSKILVPPRTVKK 138
Query: 110 TSDSNAVKS--GCSTAKEKKATASIRKP--SHADQAKDSMRDKIRKDLEKALSRVASEAA 165
+ +NA S S +E KP + A +D MR +R L + + +A
Sbjct: 139 VASNNADGSRDQLSPFEEGHTDNEGSKPLVNEAGSQQDHMR-ALRCKCTDLLYKALTGSA 197
Query: 166 DDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVL 225
D+E TD+ +++ +E +F K RS + N+ + K+ +L+ +
Sbjct: 198 KDKEETDKWL-----ELSKEIEEHVFALHCKNDKKYKNCIRSKISNLKNPKSCNLKHNLF 252
Query: 226 IGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSN 284
G ++P+ A MT E+ASDE +Q + + ++P+ GT T++ KC C KS+
Sbjct: 253 SGTLSPKAFAEMTVMEMASDELKQLRALYTESSIQEHQLPQVINGTQTNKIKCRRCEKSD 312
Query: 285 CSYHQM-----------QTRSADEPMTTYVTCAECNKRW 312
C+ + ++ + DE M T+V C EC ++W
Sbjct: 313 CTVTMIARGTLFLPGWVRSTNPDEQMLTFVICNECGEQW 351
>gi|355559483|gb|EHH16211.1| TFIIS central domain-containing protein 1 [Macaca mulatta]
gi|355757190|gb|EHH60715.1| TFIIS central domain-containing protein 1 [Macaca fascicularis]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 129/328 (39%), Gaps = 60/328 (18%)
Query: 33 ADALKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWKQKIVLGKETN 91
+ L L+ VT + L T V +++ R LK P ++N A LL WK + KET+
Sbjct: 57 GNHLTELETIYVTKEHLQETDVVRAVYRVLKNCPSVALKNKAKCLLSKWK---AVYKETH 113
Query: 92 GNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAK--------- 142
RN KL F + ++ N+ S + E S S D AK
Sbjct: 114 SKARNSPKL-----FPVRGNEENSGPSHDPSQDETLGICSSNSLSSQDVAKLSEMIVPEN 168
Query: 143 -------------DSMRDKIRKDLEKALSRVAS---------EAADDEEITDRVKARDPK 180
D + K L + L + AA D+ KA +
Sbjct: 169 RAIQLKPKKEHFGDGGPESTGKRLSELLDPITPMRTKCIELLYAALTSSSADQPKADLWQ 228
Query: 181 QVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
A +E +F K RS + N+ + KN L++ +L G ++P A MT
Sbjct: 229 NFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVM 288
Query: 241 ELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNCSY-------- 287
E+A+ E +Q ++A + C +P+ GT T++ KC C K NC
Sbjct: 289 EMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTL 344
Query: 288 ---HQMQTRSADEPMTTYVTCAECNKRW 312
++ + DE M TYV C EC ++W
Sbjct: 345 FLPSWVRNSNPDEQMMTYVICNECGEQW 372
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 177 RDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+DPK +A+ +E +++ + + + RS++FN+ D+ NPDLR RV+ E++ ERL +
Sbjct: 199 QDPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPDLRERVMSEEISAERLCS 258
Query: 237 MTPEELASDERRQ 249
MT EELAS E Q
Sbjct: 259 MTAEELASKELSQ 271
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
K R+I+FN+SD KNPDLR R+ GE+ PERL MT +E+AS E R+
Sbjct: 30 KLRNILFNLSDPKNPDLRNRIFSGELEPERLPIMTNDEMASSEMRK 75
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
A QA +S+R +++ L L +A D + +T A D K+V+ VE +++
Sbjct: 288 AGQASESVRVNVKRTLLDVLLTRVKKAPDVKNVT----ADDVKRVSKQVEFELYKLFNDT 343
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
G K K+R+++FN+ D KN L R +L GE++P L M+ ++LAS E
Sbjct: 344 GAKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQE 392
>gi|343474640|emb|CCD13763.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 183
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
E RKH ++ ++ LR+++ ++ + +EL ++E +Q E+ K +
Sbjct: 70 EDRKH--LLKHLEKPGLSALRQKLATRVLSGREFLKLGRDELMTEEEKQLEEQRITKIIE 127
Query: 261 KCE-VPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+ E V T FKC CG++ CS+++ Q RSADEP T ++ C ECN W
Sbjct: 128 EQEKVSLANVAVTSLFKCPACGENRCSFYEQQIRSADEPTTKFLRCLECNNAW 180
>gi|125597753|gb|EAZ37533.1| hypothetical protein OsJ_21863 [Oryza sativa Japonica Group]
Length = 1136
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+A +E +F L + K K RS++FN+ D+ NP LR RVL G++TP+RL +MT EE
Sbjct: 323 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 382
Query: 242 LASDE 246
LAS E
Sbjct: 383 LASKE 387
>gi|398021913|ref|XP_003864119.1| transcription elongation factor-like protein [Leishmania donovani]
gi|322502353|emb|CBZ37437.1| transcription elongation factor-like protein [Leishmania donovani]
Length = 473
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 220 LRRRVLIGEVTPERLATMTPEELAS-DERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
+R +L GE TP++ E + E+ ++ + I+ K T FKC
Sbjct: 377 IRDHLLSGEWTPKKYLDQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAMLNITSLFKCG 436
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
C K +C++++ QTRSADEP T Y+TC +C W
Sbjct: 437 RCSKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 470
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
gi|113596024|dbj|BAF19898.1| Os06g0595900, partial [Oryza sativa Japonica Group]
Length = 630
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+A +E +F L + K K RS++FN+ D+ NP LR RVL G++TP+RL +MT EE
Sbjct: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 139
Query: 242 LASDE 246
LAS E
Sbjct: 140 LASKE 144
>gi|402909518|ref|XP_003917464.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Papio anubis]
Length = 350
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 133/325 (40%), Gaps = 54/325 (16%)
Query: 33 ADALKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWKQKIVLGKETN 91
+ L L+ VT + L T V +++ R LK P ++N A LL WK + KET+
Sbjct: 27 GNHLTELETIYVTKEHLQETDVVRAVYRVLKNCPSVSLKNKAKCLLSKWK---AVYKETH 83
Query: 92 GNKRNGSKL----------------SVDEKFQKQTSDS----NAVKSGCSTAKEKKATAS 131
RN KL S DE +S+S + K E +A
Sbjct: 84 SKARNSPKLFPVRGNEENSGPSHDPSQDETLGICSSNSLSSQDVAKLSEMIVPENRAIQL 143
Query: 132 IRKPSH-ADQAKDSMRDKIRKDLE-------KALSRVASEAADDEEITDRVKARDPKQVA 183
K H D +S ++ + L+ K + + AA D+ KA + A
Sbjct: 144 KPKKEHFGDGGPESTGKRLSELLDPTTPMRTKCIELLY--AALTSSSADQPKADLWQNFA 201
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+E +F K RS + N+ + KN L++ +L G ++P A MT E+A
Sbjct: 202 REIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMA 261
Query: 244 SDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNCSY----------- 287
+ E +Q ++A + C +P+ GT T++ KC C K NC
Sbjct: 262 NKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTLFLP 317
Query: 288 HQMQTRSADEPMTTYVTCAECNKRW 312
++ + DE M TYV C EC ++W
Sbjct: 318 SWVRNSNPDEQMMTYVICNECGEQW 342
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 115 AVKSGCSTAKEKKATASI---RKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEIT 171
A K+G E K+ A+ +KP + + S+RD ++ L + L +E
Sbjct: 598 AQKTGGQHKHESKSKATALASKKPVSVEAIRRSVRDSLKDILTQRL----------KESD 647
Query: 172 DRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTP 231
+ +VA ER +F + K K+RS++FN+ D KN L +RVL GE++P
Sbjct: 648 LHISVERASEVAKKTERELFHLFKDTDHKYKNKYRSLIFNLKDTKNNVLFKRVLKGEISP 707
Query: 232 ERLATMTPEELASDE----RRQEN 251
L M+PEELAS E R++EN
Sbjct: 708 ANLIRMSPEELASKELAAWRQREN 731
>gi|164448538|ref|NP_001019643.2| transcription elongation factor A N-terminal and central
domain-containing protein [Bos taurus]
gi|117306417|gb|AAI26749.1| LOC504389 protein [Bos taurus]
gi|296470464|tpg|DAA12579.1| TPA: TFIIS central domain-containing protein 1 [Bos taurus]
Length = 378
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 120 CSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDP 179
CS + K S P D A+ D I V A E + + + A P
Sbjct: 168 CSRVETKAVPLSAWDPQSTDLAESGQLDPI----------VPVRARCTELLYEALTASSP 217
Query: 180 KQVAASVERVMFEKLRPMGVAEKRKH--------RSIMFNMSDEKNPDLRRRVLIGEVTP 231
Q A V + +++ A K+ RS + N+ + +N L++ +L G ++P
Sbjct: 218 SQPRAHVWSNLAQEIEAHVFALHPKNLQKYKTCIRSKVANLKNPRNSHLQQNLLSGTMSP 277
Query: 232 ERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCS---- 286
A MT E+AS E +Q + + +P+ +GT T + KC C K NC
Sbjct: 278 REFAKMTAMEMASQELKQLRASYTKSALREHYLPQVVEGTPTRKIKCERCEKFNCQVTVI 337
Query: 287 -----YHQMQTRSA--DEPMTTYVTCAECNKRW 312
+ R+A DE M TYV C EC ++W
Sbjct: 338 PRGTLFLPSWVRNAGPDEEMMTYVICNECGEQW 370
>gi|403255274|ref|XP_003920366.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255276|ref|XP_003920367.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Saimiri boliviensis
boliviensis]
gi|403255278|ref|XP_003920368.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Saimiri boliviensis
boliviensis]
Length = 350
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 171 TDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVT 230
TD+ KA + A +E +F K RS + N+ + KN L++ + G ++
Sbjct: 189 TDQPKADLWQNFAREIEEHVFALYSKNIKKYKTCIRSKVANLKNPKNSHLKQNLFSGTMS 248
Query: 231 PERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNC 285
P+ A MT E+A+ E +Q ++A + C +P+ GT T++ KC C K NC
Sbjct: 249 PQEFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 304
Query: 286 SYHQM-----------QTRSADEPMTTYVTCAECNKRW 312
+ + +ADE M TYV C EC ++W
Sbjct: 305 KVTAIARGALFLPTWVRNSNADEQMMTYVICNECGEQW 342
>gi|325182938|emb|CCA17393.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325189886|emb|CCA24366.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 277
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 173 RVKARDPKQVAASVERVMFEKLR---PMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEV 229
R A + Q+A VE +FE + + A +K R ++FN+ D +N LR R++ GE+
Sbjct: 130 RPLADNSDQIAMEVENQLFELYKECFTLPKAYGQKARQLLFNLRDSRNDLLRDRLMSGEL 189
Query: 230 TPERLATMTPEELASDER-RQENEEIKAK-FMFKCEVPEKKKGT-TDQFKCSGCGKSNCS 286
+ L M+ E+A+ + +Q + IK + + P+ + T +D F+C CG S
Sbjct: 190 SAAALVRMSANEMANPQLVKQRKQWIKKRTYEVMRNAPDLESLTESDMFECRSCGCSRTR 249
Query: 287 YHQMQTRSADEPMTTYVTCAECNKRWK 313
Y Q + ++ + + C +C RW+
Sbjct: 250 YRQWRRKAIVDRTRIIIICTQCPYRWE 276
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+A +E +F+ + K + RS++FN+ D+ NP+LR RVL G++ PERL +MT EE
Sbjct: 350 LALRIEEELFKLFGGVNKKYKERGRSLLFNLKDKSNPELRVRVLSGDIAPERLCSMTAEE 409
Query: 242 LASDE 246
LAS E
Sbjct: 410 LASKE 414
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 124 KEKKATAS-IRKPSHADQAK-DSMRDKIRKDL-EKALSRV--ASEAADDEEITDRVKARD 178
KEK AS + P A K + +R +R+ L E+ L+R+ A EA D+ I + + +
Sbjct: 1262 KEKAPVASRVASPVRAGSTKSEPIRVNVRRTLKEQLLARIKEAQEANKDKAI-KWLTSLE 1320
Query: 179 PKQVAASVERVMFEKL-RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
+Q A SVE M+ R G K K+RS+MFN+ D KN L ++ +V P++L M
Sbjct: 1321 VEQFAKSVESEMYHSFGRDAGAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRM 1380
Query: 238 TPEELASDE----RRQEN 251
TPE+LAS E R +EN
Sbjct: 1381 TPEQLASQELAKWREEEN 1398
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
A +E +F + + K + RS + N+ D KNPDLRR VL G +TP+++A MT EE+A
Sbjct: 1 AQIEECIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMA 60
Query: 244 SDE 246
SDE
Sbjct: 61 SDE 63
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 15/134 (11%)
Query: 122 TAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQ 181
T K K + S +KPS +R +R LE+ L + + E+ D + +DR P +
Sbjct: 784 TKKVKISPVSSKKPSTG-----HIRRSVRDSLEEILLKRSKES-DLKISSDR-----PAE 832
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
VA E+ +F + + K K+RS+ FN+ D KN L +RVL GEV+P L MT EE
Sbjct: 833 VARRTEKELFALFQGVDSKYKNKYRSLTFNLKDAKNNVLFKRVLKGEVSPADLVRMTAEE 892
Query: 242 LASDE----RRQEN 251
LAS E R++EN
Sbjct: 893 LASKELAAWRKREN 906
>gi|384246623|gb|EIE20112.1| hypothetical protein COCSUDRAFT_67485 [Coccomyxa subellipsoidea
C-169]
Length = 1199
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDRVKARD---PKQVAASVERVMFEKLRPMGVAE 201
R+K R++++++L+R EE+ + D P VA +E MF+ +
Sbjct: 337 FREKQRREMKESLTRAL------EELKAKGHEGDLPAPDMVAQRIEATMFKHFGGVNKEY 390
Query: 202 KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKF 258
++RSI FN++D+ NPD R +VL G++ P +L TM +E+AS+ R+ E A F
Sbjct: 391 GARNRSIQFNLADKSNPDFRAKVLRGDLEPAKLMTMHTQEMASELERRTVEARNANF 447
>gi|449482931|ref|XP_004174984.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Taeniopygia
guttata]
Length = 381
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 56/339 (16%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWK-- 81
SE +Q D LK L+ +T + L T+V K++ R LK P ++ A +LL WK
Sbjct: 40 SENNLQDIEDHLKELEDVDMTVEYLQGTEVTKAVYRVLKNCPSGALKKKAKQLLSRWKTL 99
Query: 82 ------QKIVLGKETNGN-KRNGSKLSVDEKFQ------------KQTSDSNAVKSG--- 119
Q + + K + K LSV + Q TS ++ + S
Sbjct: 100 YKNNCAQSMPVKKSVSVYVKEEIEHLSVVPREQLLSEGPCQQEALDGTSSNSLIPSQTVK 159
Query: 120 ---CSTAKEKKATASIRKPSHA--DQAKDSMRD-KIRKDLEKAL--------SRVASEAA 165
CS A+ + S + H D +K + + +++DL +AL + ++A
Sbjct: 160 NVVCSNAEGRMNRLSSFEAQHTVDDDSKFVVGEASLQQDLMRALRCKCVDLLYKALIDSA 219
Query: 166 DDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVL 225
DEE T + ++A +E +F K RS + N+ + K+ L+ +
Sbjct: 220 KDEEETGKWL-----ELAKEIEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLF 274
Query: 226 IGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSN 284
G ++P+ A MT E+ASDE +Q + + ++P+ GT T++ KC C K +
Sbjct: 275 SGTLSPKAFAEMTVMEMASDELKQLRALYTKSSVQEHQLPQVINGTQTNKIKCRRCEKFD 334
Query: 285 CSYHQM-----------QTRSADEPMTTYVTCAECNKRW 312
C+ + + + DE M TYV C EC ++W
Sbjct: 335 CTVTMIARGTLFLPAWVRNTNPDEQMLTYVICNECGEQW 373
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 146 RDKIRKDLEKALSRVASEAADDEEITDRVK-ARDPKQVAASVERVMFEKL-RPMGVAEKR 203
RD + K E++L+ +E + V+ A +P ++A +ER +FE+ R G
Sbjct: 110 RDNVAKKFEESLNVAKAEEEAIGVTANAVENALNPSEIAVGIERALFERCGRDTGKEYGV 169
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
RS+MFN+ D +NP LR RVL V+ E L MTP ELA+ E
Sbjct: 170 HARSLMFNLRDPQNPTLRARVLHENVSAETLVKMTPAELANKE 212
>gi|196008633|ref|XP_002114182.1| predicted protein [Trichoplax adhaerens]
gi|190583201|gb|EDV23272.1| predicted protein [Trichoplax adhaerens]
Length = 996
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSI 208
+R+++ KA + S+ A+ I V ++ ++ +E +F G K K+RS+
Sbjct: 503 VRENIYKAFRDILSKVAEKIAIQMSVVSK----LSKDIEEQLFNLFNDTGSRYKNKYRSL 558
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
FN+ DEKN L R+L G+++P +L MT EELA+ E Q
Sbjct: 559 SFNLKDEKNKALVERILHGDISPSKLVRMTSEELANKELAQ 599
>gi|301784152|ref|XP_002927499.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ailuropoda melanoleuca]
Length = 373
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 141/359 (39%), Gaps = 58/359 (16%)
Query: 5 LVTLFGAAKKAADAAAATNR--------SEPEVQRCADALKHLQAFPVTYDLLVSTQVGK 56
L +LF AA K +D R S+ + L L+ VT + L T V +
Sbjct: 14 LFSLFFAAVKMSDKKLIAARASLMEQLMSKRHFEDLGKHLTELETLHVTKEHLQETAVVR 73
Query: 57 SLRHLKKH-PCEKVQNAASELLHIWKQKI---------VLGKETNGNKRNGSKLSVDEKF 106
+ + KH P ++ A LL WK + G G K +LS D
Sbjct: 74 VVYRVLKHCPAGALKKKAKRLLSGWKARYKDLHFTPGDSPGSCPAGRKDENGRLSRDPA- 132
Query: 107 QKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAAD 166
Q S S S++ E A P ++ + + R ++ + +SE+ D
Sbjct: 133 --QGEVSGRGCSSNSSSPEVAGAAETLGPENSTSQVEPRGEHFRGGDPRSGDQRSSESLD 190
Query: 167 D-------------EEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH----RSIM 209
E +T K + ++ R + E + + +K+ RS +
Sbjct: 191 PTVPVRAKCTQLLYEALTSPCKDPPEADLWQNLAREIEEHIFTLHSKNLKKYKTCVRSKV 250
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVP 265
N+ + +N L++ +L G +P A MT E+AS E +Q ++A + C +P
Sbjct: 251 ANLKNPQNSHLQQNLLSGTTSPREFAEMTVMEMASKELKQ----LRASYTESCIQEHHLP 306
Query: 266 EKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
+ +GT T + KC C K NC +++ + DE M TYV C EC ++W
Sbjct: 307 QAIEGTQTKKIKCRRCEKFNCKVTVIARGTLFLPGWVRSSNPDEEMMTYVICNECGEQW 365
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
A QA +S+R +++ L L +A D + +T A D K+V+ VE +++
Sbjct: 1259 AGQASESVRVNVKRTLLDVLLTRVKKAPDVKNVT----ADDVKRVSKQVEFELYKLFNDT 1314
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE-RRQENEEIKA 256
G K K+R+++FN+ D KN L R +L GE++P L M+ ++LAS E + +E K
Sbjct: 1315 GAKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQELMKWREQEAKH 1374
Query: 257 KFMFKCEVPEKKKG 270
+ + E KKG
Sbjct: 1375 ELDMIVQTEEDKKG 1388
>gi|339244687|ref|XP_003378269.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
gi|316972840|gb|EFV56486.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
Length = 2283
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 67/283 (23%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 44 VTYDLLVSTQVGKSLRHLKKH--PCEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLS 101
+ D+LVST +GK++ ++ C ++ A+ L+ WK KE N LS
Sbjct: 48 IDVDMLVSTNIGKTVNRIRTTFVKCPELFENATFLVKKWK------KEVNA-------LS 94
Query: 102 VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVA 161
F+ + V+ K + P + + ++ D IR +L R
Sbjct: 95 TSSPFRLFLMIHSVVR----FYYRIKCYLDLSSPVRHNSCR-ALFDSIRSNLNNC--RAM 147
Query: 162 SEAADDEEITDRVKARDPKQVAASVERVMFE-----KLRPMGVAEKRKHRSIMFNMSDEK 216
E D + D + K + +E ++E + +E R H N+ + K
Sbjct: 148 FEDCDANLLNDN----NIKTIVQQIEESIYELNGSDETNSKYCSEIRSH---AMNLCNSK 200
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDERRQ-----ENEEIKAKFMFKCEVPEKKKGT 271
N L R +L G++ P A MT EE+A +E + E + +K + E
Sbjct: 201 NCQLLRDILTGKILPANFAKMTTEEMAPEEVKNMRKAVERDSLKEHMLSN----EGSLLH 256
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEP-MTTYVTCAECNKRWK 313
+ F C CG+ +C+Y + E TYV C +C R K
Sbjct: 257 STTFHCRQCGQRDCNYTVSYEKDGHEAEAVTYVVCNQCGHRKK 299
>gi|224042778|ref|XP_002197835.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Taeniopygia
guttata]
Length = 360
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 56/339 (16%)
Query: 25 SEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWK-- 81
SE +Q D LK L+ +T + L T+V K++ R LK P ++ A +LL WK
Sbjct: 19 SENNLQDIEDHLKELEDVDMTVEYLQGTEVTKAVYRVLKNCPSGALKKKAKQLLSRWKTL 78
Query: 82 ------QKIVLGKETNGN-KRNGSKLSVDEKFQ------------KQTSDSNAVKSG--- 119
Q + + K + K LSV + Q TS ++ + S
Sbjct: 79 YKNNCAQSMPVKKSVSVYVKEEIEHLSVVPREQLLSEGPCQQEALDGTSSNSLIPSQTVK 138
Query: 120 ---CSTAKEKKATASIRKPSHA--DQAKDSMRD-KIRKDLEKAL--------SRVASEAA 165
CS A+ + S + H D +K + + +++DL +AL + ++A
Sbjct: 139 NVVCSNAEGRMNRLSSFEAQHTVDDDSKFVVGEASLQQDLMRALRCKCVDLLYKALIDSA 198
Query: 166 DDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVL 225
DEE T + ++A +E +F K RS + N+ + K+ L+ +
Sbjct: 199 KDEEETGKWL-----ELAKEIEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLF 253
Query: 226 IGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSN 284
G ++P+ A MT E+ASDE +Q + + ++P+ GT T++ KC C K +
Sbjct: 254 SGTLSPKAFAEMTVMEMASDELKQLRALYTKSSVQEHQLPQVINGTQTNKIKCRRCEKFD 313
Query: 285 CSYHQM-----------QTRSADEPMTTYVTCAECNKRW 312
C+ + + + DE M TYV C EC ++W
Sbjct: 314 CTVTMIARGTLFLPAWVRNTNPDEQMLTYVICNECGEQW 352
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP+ +A +E +F+ + K K RS++FN+ D+ NP LR +V+ GE+ ERL +M
Sbjct: 264 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 323
Query: 238 TPEELASDE 246
+ EELAS E
Sbjct: 324 SAEELASKE 332
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP+ +A +E +F+ + K K RS++FN+ D+ NP LR +V+ GE+ ERL +M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 238 TPEELASDE 246
+ EELAS E
Sbjct: 375 SAEELASKE 383
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + VA ++E+ MF +
Sbjct: 845 QPNSQIRQNIRRSLKEILWKRVNDS-DDLVMTESEVGK----VALNIEKEMFNLFQVTDN 899
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL GE++ +L M PEEL S E
Sbjct: 900 RYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSKE 946
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP+ +A +E +F+ + K K RS++FN+ D+ NP LR +V+ GE+ ERL +M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 238 TPEELASDE 246
+ EELAS E
Sbjct: 375 SAEELASKE 383
>gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|332004296|gb|AED91679.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 873
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 177 RDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+DPK +A+ +E +++ + + + RS++FN+ D+ NP+LR RV+ E++ ERL +
Sbjct: 259 QDPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCS 318
Query: 237 MTPEELASDERRQ 249
MT EELAS E Q
Sbjct: 319 MTAEELASKELSQ 331
>gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana]
Length = 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 177 RDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+DPK +A+ +E +++ + + + RS++FN+ D+ NP+LR RV+ E++ ERL +
Sbjct: 257 QDPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCS 316
Query: 237 MTPEELASDERRQ 249
MT EELAS E Q
Sbjct: 317 MTAEELASKELSQ 329
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
+ MR IR+ L L + S++ DD ++T+ R +A ++E+ MF K
Sbjct: 659 NQMRQNIRRSLTDILYKRVSDS-DDLKMTESEVGR----LAVAIEKEMFNLCLSTDSKYK 713
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K+RS+MFN+ D KN L RV+ GEV+P RL ++ EEL S E
Sbjct: 714 NKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKE 757
>gi|297709429|ref|XP_002831433.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pongo abelii]
gi|297709431|ref|XP_002831434.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pongo abelii]
Length = 351
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + KN L++
Sbjct: 183 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVTDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
+ MR IR+ L L + S++ DD ++T+ R +A ++E+ MF K
Sbjct: 640 NQMRQNIRRSLTDILYKRVSDS-DDLKMTESEVGR----LAFAIEKEMFNLCLNTDSKYK 694
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K+RS+MFN+ D KN L RV+ G+VTP RL ++ EEL S E
Sbjct: 695 NKYRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAEELLSKE 738
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
DP+ +A +E +F+ + K K RS++FN D+ NP LR +V+ GE+ ERL +M
Sbjct: 296 DPQVLAFEIEAELFKLFGGVNKKYKEKGRSLLFNFKDKSNPKLREKVMYGEIAAERLCSM 355
Query: 238 TPEELASDE 246
+ EELAS E
Sbjct: 356 SAEELASKE 364
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + VA ++E+ MF
Sbjct: 758 QPNSQIRQNIRRSLKEILWKRVNDS-DDLVMTESEVGK----VALNIEKEMFNLFHVTDN 812
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL GE++ +L M PEEL S E
Sbjct: 813 RYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSKE 859
>gi|395840531|ref|XP_003793109.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Otolemur garnettii]
Length = 352
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 171 TDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVT 230
TD+ KA + A +E +F + K RS + N+ + +N L++ +L G ++
Sbjct: 191 TDQPKAPLWQNFAREIEEHIFTRYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGALS 250
Query: 231 PERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNC 285
P A MT E+A++E +Q ++A + C +P+ GT T + +C C K NC
Sbjct: 251 PREFAEMTVMEMANEELKQ----LRASYTESCIQEHYLPQGIDGTQTKKIRCRRCEKYNC 306
Query: 286 SY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
++ + DE M TYV C EC ++W
Sbjct: 307 KVTVIARGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 344
>gi|195500468|ref|XP_002097386.1| GE26190 [Drosophila yakuba]
gi|194183487|gb|EDW97098.1| GE26190 [Drosophila yakuba]
Length = 2001
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 18/161 (11%)
Query: 109 QTSDSNAVKSGCSTAK------EKKATASIRKPSHADQA--KDSMRDKIRKDL-EKALSR 159
QT+ A G S+ + ++K TA ++ P A + +R IR+ L E+ L+R
Sbjct: 1222 QTTTVQANPLGISSVRPLAKRDKEKPTAPVQAPVPNRSAGKPEPVRIGIRRSLREQLLAR 1281
Query: 160 VASEAADDEEI----TDRVKARDPKQVAASVERVMFEKL-RPMGVAEKRKHRSIMFNMSD 214
+ A +E + T + + Q SVE MF R +G K K+RS+MFN+ D
Sbjct: 1282 IKEAQAAEESLGQAPTQWLTVLEVDQFVRSVELEMFNSFGRDVGAKYKAKYRSLMFNIKD 1341
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
KN L ++ +V P++L MTPE+LAS E R +EN
Sbjct: 1342 RKNRTLFEKICAKQVEPKQLVRMTPEQLASQELAKWREEEN 1382
>gi|431909796|gb|ELK12942.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Pteropus alecto]
Length = 352
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ + KN L++ +L G ++P A MT E+AS+E +Q + + +P
Sbjct: 226 RSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMASNELKQLRASYAESSIREHYLP 285
Query: 266 EKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
+ +GT T + KC C K NC ++ + DE M TYV C EC ++W
Sbjct: 286 QAIEGTQTKKIKCRRCEKFNCKVTVIARGTLFLPSWVRNSNPDEEMMTYVICNECGEQW 344
>gi|294887906|ref|XP_002772275.1| DNA-directed RNA polymerase subunit M, putative [Perkinsus marinus
ATCC 50983]
gi|239876350|gb|EER04091.1| DNA-directed RNA polymerase subunit M, putative [Perkinsus marinus
ATCC 50983]
Length = 78
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
F+C C KS +Y QMQTRS+DEPMTT+VTC C +WK
Sbjct: 38 FQCGKCRKSQTTYFQMQTRSSDEPMTTFVTCLNCGNKWK 76
>gi|348680251|gb|EGZ20067.1| hypothetical protein PHYSODRAFT_495059 [Phytophthora sojae]
Length = 118
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDER-RQENEEIKAKFMFKC 262
K R+++FN+ D +N DLR R++ GE+ L M ++A+ + RQ E I+ +
Sbjct: 6 KARTLLFNLKDSRNVDLRNRLVSGELPSHSLVRMNGRDMANPQLVRQRKEWIRKRTHEVM 65
Query: 263 EVPEKKKGT-TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+ +G +D F+C CG S Y Q + ++ + V C C RW
Sbjct: 66 RDGREAEGFESDLFECRNCGSSRTRYRQWRRKAVVDRTRIIVICLRCPNRW 116
>gi|449266698|gb|EMC77719.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Columba livia]
Length = 360
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ + K+ LR + G ++P+ A MT E+ASDE +Q + + ++P
Sbjct: 234 RSKISNLKNPKSCHLRHNLFSGTLSPKAFAEMTVMEMASDELKQLRALYTESSVQEHQLP 293
Query: 266 EKKKGT-TDQFKCSGCGKSNCSYHQM-----------QTRSADEPMTTYVTCAECNKRW 312
+ GT T++ KC C K +C+ + + + DE M TYV C EC ++W
Sbjct: 294 QVINGTQTNKIKCRRCEKFDCTVTMIARGTLFLPGWVRNTNPDEQMLTYVICNECGEQW 352
>gi|448930116|gb|AGE53682.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus GM0701.1]
Length = 186
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK-----CEVPEKKKGTT 272
PD+ ++ G + ++ P E+ E+ +E E AK + C P K
Sbjct: 87 PDILEQMKAGNASIKQFVYAKPYEICP-EKWEEAFEQAAKRTLRFSDASCMDP--KDMPD 143
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG SY+Q+QTRSADE +TTY C ECN RWK
Sbjct: 144 GMLQCRQCGSKKTSYYQLQTRSADEGITTYARCHECNNRWK 184
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
+Q + ++ D +R+ L K L A+ +E + + +AA++E +F+ ++
Sbjct: 765 GEQVRSAVADSLREVLLKRLQEPANLTVGEEAV---------RGIAANIEAAIFDLMQCT 815
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
K K+RS++FN+ D +N DL +V+ G++TP+ L M+ ELAS E Q
Sbjct: 816 DYRYKTKYRSLVFNLRDPRNKDLFLQVIRGDITPQGLVRMSATELASQELAQ 867
>gi|67522641|ref|XP_659381.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|40744797|gb|EAA63953.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|259487122|tpe|CBF85543.1| TPA: PHD finger domain protein, putative (AFU_orthologue;
AFUA_6G09000) [Aspergillus nidulans FGSC A4]
Length = 889
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 180 KQVAASVERVMFEKLRPMGV-----AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+ SVE +++ L G A K + R+I+FN+ +KNP LR R+L+G +TP+ L
Sbjct: 322 QQLGISVEEALYQNLMGGGGEATSEAYKIQLRAILFNV--KKNPSLRDRLLVGSLTPDAL 379
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +E+AS+E +Q++ EIK
Sbjct: 380 SRMSSQEMASEELQQKDAEIK 400
>gi|303285732|ref|XP_003062156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456567|gb|EEH53868.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 177 RDPK---QVAASVERVMFEK-LRPMGVAEKR-KHRSIMFNMSDEKNPDLRRRVLIGEVTP 231
RDP ++ +ER +FE E R + RSI FN++ KN LR L G++ P
Sbjct: 96 RDPSPLFELGVKIERALFEAHGEDASNGEYRARARSIAFNLA--KNESLRVGALAGDIAP 153
Query: 232 ERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCSYHQM 290
+A MTP+ELA+++ R ++++ + K T TD F C+ C + C Y ++
Sbjct: 154 ATIARMTPDELATEDMRNARKKMEERLTRKRTRTNMDGATETDAFACAHCRSTRCQYLRV 213
Query: 291 -QTR-----------SADEPMTTYVTCAECNKRW 312
Q R A + V C EC W
Sbjct: 214 GQVRDLGKSETWGNKDAADDAKVLVRCLECQAEW 247
>gi|67537382|ref|XP_662465.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
gi|40741749|gb|EAA60939.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
Length = 386
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 111/269 (41%), Gaps = 27/269 (10%)
Query: 14 KAADAAAATNRSEPEVQRCADALKHLQ-AFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNA 72
KA A ++EP LK LQ + DLL ST+VG + K+H +V
Sbjct: 11 KAKALTKAATQNEPPAN-IVSLLKELQQGVKASEDLLRSTRVGIIVNKFKQHKAPEVARL 69
Query: 73 ASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASI 132
+SE++ W+ E N K +GS + N S S K +
Sbjct: 70 SSEIVSKWRN------EVNKQKASGSASASQRSSASPRPPQNGTASPASATPSDKMSKLA 123
Query: 133 RKPSHADQAKDSMRDKIRKDLEKALSRVASEAADD--EEITDRV---KARDPKQVAASVE 187
P D + +++ + A D+ + D + A PK V +
Sbjct: 124 VPPDKRTWKADGI----------DINQTGNRARDNCIGLMYDGLCLHSAEPPKAVLSKAA 173
Query: 188 RVMFEKLRPMGVAEKRKH----RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
V G K + RS+ N+ ++ NP LR RVL EVTPER MT EEL
Sbjct: 174 AVEAAAYDAYGPETKEPYRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELR 233
Query: 244 SDERRQENEEIKAKFMFKCEVPEKKKGTT 272
SDE+R+++ +I+ + M K V + ++ +
Sbjct: 234 SDEQREKDRKIQKENMDKAMVAQAERSIS 262
>gi|451927375|gb|AGF85253.1| transcription factor [Moumouvirus goulette]
Length = 170
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 25/120 (20%)
Query: 205 HRSIMFNMSDEKNP--DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+R+++FN+ + + ++++ +L + LA + P+EL D IK
Sbjct: 62 YRNLIFNLKENCDTIKEIKQLILENKYNAYNLAFLKPDELNKDNW------IK------- 108
Query: 263 EVPEKKKGTTDQFK---------CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ +KK T ++ C C + Y Q+QTRSADEPMTT+ TC +CNK +K
Sbjct: 109 -IISRKKTTEEKLNDLPAVEWKPCRACKNTEYFYRQLQTRSADEPMTTFYTCKKCNKTYK 167
>gi|311977721|ref|YP_003986841.1| transcription factor S-II-related protein [Acanthamoeba polyphaga
mimivirus]
gi|82000272|sp|Q5UQS8.1|TFS2_MIMIV RecName: Full=Transcription factor S-II-related protein
gi|55416958|gb|AAV50608.1| TFII-like transcription factor [Acanthamoeba polyphaga mimivirus]
gi|308204765|gb|ADO18566.1| transcription factor S-II-related protein [Acanthamoeba polyphaga
mimivirus]
gi|351737490|gb|AEQ60525.1| TFII-like transcription factor [Acanthamoeba castellanii mamavirus]
Length = 173
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
Query: 206 RSIMFNMSDEKN---PDLRRRVLIGEVTPERLATMTPEELASDE------RRQENEEIKA 256
++IMFN+ DE N +++ + + LA + PEEL D R+Q EE
Sbjct: 65 KNIMFNLKDENNHTIKKIKKLIDKNKYNAYNLAFLNPEELNKDNWIKIIARKQMTEE--- 121
Query: 257 KFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ T + C C ++ ++Q+QTRSADEPMTT+ C C K +K
Sbjct: 122 --------TLNQMATVEWKPCYACKNTSYHFYQLQTRSADEPMTTFYICKNCMKTYK 170
>gi|344306328|ref|XP_003421840.1| PREDICTED: death-inducer obliterator 1 [Loxodonta africana]
Length = 2247
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 114 NAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDR 173
AV + ++ + A+ PS Q +R IR+ L++ L + S++ DD +T+
Sbjct: 648 GAVSAPGTSPGPGRLGAASPAPS---QPNSQIRQNIRRSLKEILWKRVSDS-DDLIMTEN 703
Query: 174 VKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPER 233
R VA +E+ MF + K K+RSIMFN+ D KN L RVL E++ +
Sbjct: 704 EVGR----VALRIEKEMFSLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAK 759
Query: 234 LATMTPEELASDE 246
L M PEELAS E
Sbjct: 760 LVRMKPEELASKE 772
>gi|281340950|gb|EFB16534.1| hypothetical protein PANDA_017273 [Ailuropoda melanoleuca]
Length = 349
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC--- 262
RS + N+ + +N L++ +L G +P A MT E+AS E +Q ++A + C
Sbjct: 224 RSKVANLKNPQNSHLQQNLLSGTTSPREFAEMTVMEMASKELKQ----LRASYTESCIQE 279
Query: 263 -EVPEKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECN 309
+P+ +GT T + KC C K NC +++ + DE M TYV C EC
Sbjct: 280 HHLPQAIEGTQTKKIKCRRCEKFNCKVTVIARGTLFLPGWVRSSNPDEEMMTYVICNECG 339
Query: 310 KRW 312
++W
Sbjct: 340 EQW 342
>gi|426395180|ref|XP_004063853.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Gorilla gorilla
gorilla]
Length = 381
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + KN L++
Sbjct: 213 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNCHLQQN 272
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 273 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 328
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 329 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 373
>gi|397468106|ref|XP_003805736.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pan paniscus]
Length = 381
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 213 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 272
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 273 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 328
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 329 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 373
>gi|426395182|ref|XP_004063854.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Gorilla gorilla
gorilla]
gi|426395184|ref|XP_004063855.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Gorilla gorilla
gorilla]
Length = 351
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + KN L++
Sbjct: 183 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNCHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|315040700|ref|XP_003169727.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
gi|311345689|gb|EFR04892.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
Length = 849
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 92 GNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKD-----SMR 146
G+++ KLS + Q + S+ V+SG + ++ + +S R PS K +
Sbjct: 223 GSRQKLQKLSTNLPAPPQDARSSPVQSGVQSGRQ--SASSPRTPSQGPTLKSRSGSTAGI 280
Query: 147 DKI---RKDLEKALSRVASE------AADDEEI-TDRVKARDPKQVAASVERVMFEKL-- 194
D + R+ ALS++ E AA I +D K +++ A +E M+ L
Sbjct: 281 DHLIVARRSAATALSKLVIEIAGAAVAAGTFTIPSDSTKETVGERLGAEIEDCMYRNLCG 340
Query: 195 ---RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQEN 251
P A K + R+I+FN+ KNP LR +L+G TP+ ++TM+ + +AS E R+++
Sbjct: 341 SSGEPND-AYKNQLRTILFNV--RKNPSLRDSLLVGRTTPDAISTMSTQNMASQELREKD 397
Query: 252 EEIK 255
EEIK
Sbjct: 398 EEIK 401
>gi|84043614|ref|XP_951597.1| transcription elongation factor S-II [Trypanosoma brucei TREU927]
gi|33348490|gb|AAQ15815.1| transcription elongation factor S-II, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359168|gb|AAX79612.1| transcription elongation factor S-II, putative [Trypanosoma brucei]
Length = 467
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
L L + VT L+ T++G S+ R L K E+ ++ A+ ++ W K L +ET
Sbjct: 193 LLKLASVSVTLRQLLRTKIGVSVSRALSKKDLEEQRSLATCIISAWTAK--LPEETVRAI 250
Query: 95 RNGSKLSVDEKFQKQTSDSNAVKS----GCSTAKEKKATASIRKPSHADQAKD--SMRDK 148
+K + K + T+ S + G ++ + + + PS ++ + ++
Sbjct: 251 EEYNKYEQEAKKRGGTARSGGARHNKRRGTISSSQTREERDVATPSTSESVGNPITIGGG 310
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSI 208
+ + ++ + D + V++ D + VA E++ E R +E R + +
Sbjct: 311 AQPQFVDRVQKLLLQPGDPHSFS--VRSDDLRSVA---EKICAEVTR----SEDRMY--L 359
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKK 268
+ ++S ++RRR+ +GE++ + ++ EL + E +++ E + + E E+
Sbjct: 360 LEHLSKPGLSEIRRRLAMGELSGKDFLELSRWELMTQEEKEDAERRTTEKLRNLEETERS 419
Query: 269 K-GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
TT F+C C C + ++Q RSADEP T ++ C +C W
Sbjct: 420 LLHTTSLFECPECHGRECEWRELQIRSADEPTTKFIKCIKCKHNW 464
>gi|117949797|sp|Q8N8B7.2|TEANC_HUMAN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
Length = 351
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 183 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|114687798|ref|XP_001135670.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pan troglodytes]
Length = 381
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 213 AALTSSSTDQPKAGLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 272
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 273 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 328
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 329 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 373
>gi|194377496|dbj|BAG57696.1| unnamed protein product [Homo sapiens]
Length = 381
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 213 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 272
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 273 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 328
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 329 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 373
>gi|67906720|gb|AAY82793.1| hypothetical protein At2g13640 [Arabidopsis thaliana]
Length = 379
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
+V LF AAKKAAD A A +PEV RC DAL L +T ++ L L
Sbjct: 264 MVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGLT 323
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH K+ + AS LLH+W+Q+I
Sbjct: 324 KHKDRKICHVASALLHLWRQRI 345
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 15 AADAAAATNRSEPEVQRCADALKHLQAFPVTY-DLLVSTQVGKSLRHLKKHPCEKVQNAA 73
AA A R+ EV+RC D L HL++ ++ D+ +S + K L L+ H +++ A
Sbjct: 26 AAIKATYNTRNPCEVERCIDVLNHLKSLSLSVKDIRLSESIVK-LETLRSHRNPRIRKEA 84
Query: 74 SELLHIW 80
L H W
Sbjct: 85 QALFHSW 91
>gi|189054986|dbj|BAG37970.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 183 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|158255978|dbj|BAF83960.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 183 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|154146187|ref|NP_689847.2| transcription elongation factor A N-terminal and central
domain-containing protein [Homo sapiens]
Length = 381
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 213 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 272
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 273 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 328
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 329 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 373
>gi|114687800|ref|XP_001135750.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pan troglodytes]
gi|114687802|ref|XP_520934.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Pan troglodytes]
Length = 351
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 183 AALTSSSTDQPKAGLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|119619229|gb|EAW98823.1| hCG1798824 [Homo sapiens]
Length = 351
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 183 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|15225452|ref|NP_178987.1| transcription factor IIS-like protein [Arabidopsis thaliana]
gi|4558668|gb|AAD22686.1| hypothetical protein [Arabidopsis thaliana]
gi|330251155|gb|AEC06249.1| transcription factor IIS-like protein [Arabidopsis thaliana]
Length = 384
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
+V LF AAKKAAD A A +PEV RC DAL L +T ++ L L
Sbjct: 264 MVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGLT 323
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH K+ + AS LLH+W+Q+I
Sbjct: 324 KHKDRKICHVASALLHLWRQRI 345
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 15 AADAAAATNRSEPEVQRCADALKHLQAFPVTY-DLLVSTQVGKSLRHLKKHPCEKVQNAA 73
AA A R+ EV+RC D L HL++ ++ D+ +S + K L L+ H +++ A
Sbjct: 26 AAIKATYNTRNPCEVERCIDVLNHLKSLSLSVKDIRLSESIVK-LETLRSHRNPRIRKEA 84
Query: 74 SELLHIW 80
L H W
Sbjct: 85 QALFHSW 91
>gi|397468108|ref|XP_003805737.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pan paniscus]
gi|397468110|ref|XP_003805738.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Pan paniscus]
Length = 351
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 183 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 242
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 243 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 298
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 299 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 343
>gi|74007121|ref|XP_537955.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Canis lupus familiaris]
Length = 348
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC--- 262
RS + N+ + KN L++ +L G ++P A MT E+A+ E +Q ++A + C
Sbjct: 222 RSKVANLRNPKNSHLQQNLLSGTMSPREFAKMTVMEMANKELKQ----LRASYTESCIQE 277
Query: 263 -EVPEKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECN 309
+P+ +GT T + KC C K NC ++ + DE M TYV C EC
Sbjct: 278 HHLPQAIEGTHTRKIKCRRCEKFNCKVTVIARGTLFLPSWVRNSNPDEEMMTYVICNECG 337
Query: 310 KRW 312
++W
Sbjct: 338 EQW 340
>gi|29423670|gb|AAO73429.1| hypothetical protein [Arabidopsis thaliana]
Length = 384
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
+V LF AAKKAAD A A +PEV RC DAL L +T ++ L L
Sbjct: 264 MVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGLT 323
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH K+ + AS LLH+W+Q+I
Sbjct: 324 KHKDRKICHVASALLHLWRQRI 345
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 15 AADAAAATNRSEPEVQRCADALKHLQAFPVTY-DLLVSTQVGKSLRHLKKHPCEKVQNAA 73
AA A R+ EV+RC D L HL++ ++ D+ +S + K L L+ H +++ A
Sbjct: 26 AAIKATYNTRNPCEVERCIDVLNHLKSLSLSVKDIRLSESIVK-LETLRSHXNPRIRKEA 84
Query: 74 SELLHIW 80
L H W
Sbjct: 85 QALFHSW 91
>gi|215274650|sp|P0C8F5.1|TFS2_ASFK5 RecName: Full=Transcription factor S-II-related protein
Length = 243
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+++ D +++ GE+ PE + +MT EL +E EI + K V EK T+
Sbjct: 149 QQDNDALNKLISGELKPEAIGSMTFAELCPSAALKEKTEITLRSQQK--VAEK---TSQL 203
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+KC C + C+Y ++QTR+ DEP T Y TC +C +
Sbjct: 204 YKCPNCKQRMCTYREVQTRALDEPSTIYCTCKKCGHEF 241
>gi|340052391|emb|CCC46669.1| putative transcription elongation factor s-II [Trypanosoma vivax
Y486]
Length = 453
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
T FKC CGK+ CS+++ Q RSADEP T ++ C EC W
Sbjct: 410 TSLFKCPNCGKNRCSFYEQQIRSADEPTTKFLRCLECKTSW 450
>gi|332030327|gb|EGI70070.1| Death-inducer obliterator 1 [Acromyrmex echinatior]
Length = 2282
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 19/134 (14%)
Query: 117 KSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAAD----DEEITD 172
KS S K+ K T ++KP + +R IRK L + LS E D DEEI D
Sbjct: 1241 KSSPSQLKQTKLTP-VKKPE-----TEPIRVNIRKSLTELLSSRIKETKDLKLTDEEIAD 1294
Query: 173 RVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
+A ++E M++ + G K K+RS++FN+ D KN L R++ +TP+
Sbjct: 1295 ---------LAFNIEFEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADHSLTPD 1345
Query: 233 RLATMTPEELASDE 246
+ ++P+E+AS E
Sbjct: 1346 AVVRLSPDEMASQE 1359
>gi|296234921|ref|XP_002807916.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein
[Callithrix jacchus]
Length = 382
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC--- 262
RS + N+ + KN L++ + G ++P A M+ E+A+ E +Q ++A + C
Sbjct: 256 RSKVANLKNPKNSHLKQNLFSGTMSPREFAEMSVMEMANKELKQ----LRASYTESCIQE 311
Query: 263 -EVPEKKKGT-TDQFKCSGCGKSNCSYHQM-----------QTRSADEPMTTYVTCAECN 309
+P+ GT T++ KC C K NC + + +ADE M TYV C EC
Sbjct: 312 HYLPQVIDGTQTNKIKCRRCEKYNCKVTTIARGTLFLPTWVRNSNADEQMMTYVICNECG 371
Query: 310 KRW 312
++W
Sbjct: 372 EQW 374
>gi|261338797|gb|ACX70080.1| UT01587p [Drosophila melanogaster]
Length = 1144
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 98 SKLSVDEKFQKQTSDSNAVKSGCSTAKE--KKATASIRKPSH---ADQAKDSMRDKIRKD 152
+KLS + Q S + S AK+ +K T +++ P+ A + +R IR+
Sbjct: 350 AKLSHPQNTTVQASHQLGISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPVRIGIRRS 409
Query: 153 L-EKALSRV----ASEAADDEEITDRVKARDPKQVAASVERVMFEKL-RPMGVAEKRKHR 206
L E+ L+R+ A+E + T + Q +VE MF R +G K K+R
Sbjct: 410 LREQLLARIKEAQAAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYR 469
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++ +V P +L MTPE+LAS E R +EN
Sbjct: 470 SLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEEN 518
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 180 KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
K +AA +E +F+ ++ K K+R+++FN+ D +NPDL +V+ G VTP L M+
Sbjct: 563 KGIAADIEAALFDLMQGTTYRYKTKYRTLLFNLRDPRNPDLFLKVVHGNVTPHDLVRMSS 622
Query: 240 EELASDE--RRQENEEIKA 256
+LAS E R ++ EE K
Sbjct: 623 VQLASQELARWRDQEEKKG 641
>gi|215274651|sp|P0C8F6.1|TFS2_ASFM2 RecName: Full=Transcription factor S-II-related protein
gi|450740|emb|CAA50848.1| transcription factor SII [African swine fever virus]
Length = 243
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+++ D +++ GE+ PE+L MT EL +E EI + K V EK T+
Sbjct: 149 QQDNDALNKLISGELKPEQLVGMTFAELCPSAALKEKTEITLRSQQK--VAEK---TSQL 203
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+KC C + C+Y ++QTR+ DEP T + TC +C +
Sbjct: 204 YKCPNCKQRMCTYREVQTRALDEPSTIFCTCKKCGHEF 241
>gi|261326497|emb|CBH09458.1| transcription elongation factor A protein 1,putative [Trypanosoma
brucei gambiense DAL972]
Length = 467
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 37/293 (12%)
Query: 36 LKHLQAFPVTYDLLVSTQVGKSL-RHLKKHPCEKVQNAASELLHIWKQKIVLGKETNGNK 94
L L + VT L+ T++G S+ R L K E+ ++ A+ ++ W K L +ET
Sbjct: 193 LLKLASVSVTLRQLLRTKIGVSVSRALSKKDLEEQRSLATCIISAWTAK--LPEET---- 246
Query: 95 RNGSKLSVDEKFQKQTSDS----NAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIR 150
+ E++ K ++ A +SG + +++ T S + Q ++
Sbjct: 247 -----VRAIEEYNKYEQEAKKRGGAARSGGARHNKRRGTIS------SSQTREERDVATP 295
Query: 151 KDLEKALSRVASEAADDEEITDRVK-----ARDPKQVAASVE--RVMFEKLRPMGVAEKR 203
E + + + DRV+ DP + + R + EK+ AE
Sbjct: 296 STSESVGNPITIGGGAQPQFVDRVQKLLLQPGDPHSFSVRSDNLRSVAEKI----CAEVT 351
Query: 204 KHRSIMFNMSDEKNPDL---RRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMF 260
+ M+ + P L RRR+ +GE++ + ++ EL + E +++ E + +
Sbjct: 352 RSEDRMYLLEHLSKPGLSEIRRRLAMGELSGKDFLELSRWELMTQEEKEDAERRTTEKLR 411
Query: 261 KCEVPEKKK-GTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
E E+ TT F+C C C + ++Q RSADEP T ++ C +C W
Sbjct: 412 NLEETERSLLHTTSLFECPECHGRECEWRELQIRSADEPTTKFIKCIKCKHNW 464
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%)
Query: 178 DPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
D +++ + +E +++++R + K + RS + N+ D KNP+LR+ VL G + P+ A M
Sbjct: 40 DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARM 99
Query: 238 TPEELASDE 246
T EE+ASDE
Sbjct: 100 TAEEMASDE 108
>gi|194901746|ref|XP_001980412.1| GG18883 [Drosophila erecta]
gi|190652115|gb|EDV49370.1| GG18883 [Drosophila erecta]
Length = 2004
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 135 PSHADQAKDSMRDKIRKDL-EKALSRV----ASEAADDEEITDRVKARDPKQVAASVERV 189
P+ + + +R IR+ L ++ L+R+ A+E + T + A + Q SVE
Sbjct: 1261 PNRSAGKPEPVRIGIRRSLRDQLLARIKEAQAAEENSGQAPTQWLTALEVDQFVKSVELE 1320
Query: 190 MFEKL-RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE-- 246
MF R +G K K+RS+MFN+ D KN L ++ +V P++L MTPE+LAS E
Sbjct: 1321 MFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLASQELA 1380
Query: 247 --RRQEN 251
R +EN
Sbjct: 1381 KWREEEN 1387
>gi|432109698|gb|ELK33774.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Myotis davidii]
Length = 352
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVP 265
RS + N+ + +N L+R +L G ++P A MT ++AS E ++ + + + +P
Sbjct: 226 RSKVANLKNPRNSHLQRNLLSGTMSPREFAEMTVMDMASKELKELRDSYTESGIQEHCLP 285
Query: 266 EKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
+ +GT T++ KC C K NC ++ + DE M TYV C EC ++W
Sbjct: 286 QVMEGTQTEKIKCRHCEKFNCKVTVIDRGALFLPSWVRNSNPDEQMMTYVICNECGQQW 344
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 183 AASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
A ++E+ +F K+K+RSI+FN+ D N L RR+++GE+TP+ LA+++ E+
Sbjct: 262 AKNIEQEIFALFYHTDARYKKKYRSILFNLKDPNNKVLFRRLVLGEITPQHLASLSSTEM 321
Query: 243 ASDE 246
A DE
Sbjct: 322 AGDE 325
>gi|159481668|ref|XP_001698900.1| hypothetical protein CHLREDRAFT_159323 [Chlamydomonas reinhardtii]
gi|158273392|gb|EDO99182.1| predicted protein [Chlamydomonas reinhardtii]
Length = 229
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE-VPEK 267
+ S ++N DLR +V+ G V P L M +LA+ +++QE +K K + + V
Sbjct: 109 LLVASLKRNADLRGQVVSGAVDPAALVAMDSRQLATSQQQQEFAHLKDKALQRVTVVGSG 168
Query: 268 KKGT-TDQFKCSGCGKSNCSY--------HQMQTRSADEPMTT--YVTCAECNKRWK 313
GT T ++ C CG +NC+Y + +T + E TT VTC C RW+
Sbjct: 169 ASGTLTTEYACKKCGGNNCNYIESGRRDIGKSETWGSKEGATTNRVVTCLGCGHRWE 225
>gi|344288715|ref|XP_003416092.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Loxodonta africana]
Length = 353
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 32/210 (15%)
Query: 118 SGCS-TAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKA 176
SGC T K+++ S+ P+ +R K + L KAL+ + TD KA
Sbjct: 153 SGCDLTPTGKESSESLVGPT------TPLRTKSIELLYKALTSSS---------TDLPKA 197
Query: 177 RDPKQVAASVERVMFEKLRPMGVAEKRKH--RSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
++ A +E +F G +K K RS + N+ + +N L++ +L G ++P
Sbjct: 198 DLWQKFAREIEEHIFALYS--GNLKKYKTCIRSKVSNLKNPRNSHLQQNLLSGTMSPREF 255
Query: 235 ATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCSY------ 287
A MT E+A+ E + + + +P++ GT T++ KC C K NC
Sbjct: 256 AAMTVLEMANQELKDLRAAYTESSIQEHRLPQELDGTPTNKIKCRRCEKYNCKVTVIARG 315
Query: 288 -----HQMQTRSADEPMTTYVTCAECNKRW 312
++ + DE M TYV C EC ++W
Sbjct: 316 ALFLPSWVRNSNPDEQMMTYVICNECGEQW 345
>gi|149734279|ref|XP_001491643.1| PREDICTED: death-inducer obliterator 1 [Equus caballus]
Length = 2272
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 120 CSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDP 179
STA + T+S Q +R IR+ L++ L + S++ DD +T+ +
Sbjct: 652 ASTAPGRLGTSS----PAPSQPNSQIRQNIRRSLKEILWKRVSDS-DDLIMTENEVGK-- 704
Query: 180 KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
+A +E+ MF R K K+RSIMFN+ D KN L RVL E++ +L M P
Sbjct: 705 --IALHIEKEMFNLFRVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKP 762
Query: 240 EELASDE 246
EEL S E
Sbjct: 763 EELVSKE 769
>gi|448932235|gb|AGE55795.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus MN0810.1]
Length = 184
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 20/195 (10%)
Query: 125 EKKATASIRKP-SHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVA 183
+ K + SI KP S ++ + R + +E V E A D K R ++A
Sbjct: 3 QPKMSKSIYKPVSTPEEIRLKARSMLLATVEDEKIAVYLEKASWNHSVDFCKKR---EIA 59
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+ + F + V S+ +N+ + PD+ +++ G+ + ++ P E+
Sbjct: 60 LNWDNFAFRNIYTQKVL------SVRYNIRNR--PDVLSQMIEGKASIKQFVDAKPHEIC 111
Query: 244 SDERRQENEEIKAKFMFK-----CEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEP 298
E+ E E AK + C PE Q C CG SY+++QTRSADEP
Sbjct: 112 P-EKWAEAFESAAKRALRFSDASCMDPETMPDGMLQ--CKKCGSKKTSYYELQTRSADEP 168
Query: 299 MTTYVTCAECNKRWK 313
MT + C C RWK
Sbjct: 169 MTVFARCHNCPNRWK 183
>gi|119619230|gb|EAW98824.1| hCG2043271, isoform CRA_a [Homo sapiens]
Length = 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 50 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 109
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 110 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 165
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 166 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 210
>gi|71004188|ref|XP_756760.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
gi|46095649|gb|EAK80882.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
Length = 1137
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 107 QKQTSDSNAVKSGCSTAKEKKATASIRKPSH-ADQAKDSMRDKIRKDLEKALSRVASEA- 164
Q++TSD++ S S + RKP+ D + + R + RK L AL + S A
Sbjct: 328 QRRTSDASRRASASSKPAAASKKGASRKPTGPTDASTEEARSRARKVLATALEMIFSSAT 387
Query: 165 --------ADDEEITDRVKARDPKQVAASVERVMFEK-------LRPMGVAEKRKHRSIM 209
AD++E +D +A A+ +E +F+ +R +G K + R+ +
Sbjct: 388 EKKKSTGAADEDEESDEQRAH---SFASLLEEDLFDSNADTHGSIRVVGSKYKDRFRTFL 444
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
F++ D KN L R+ G++ P L MT EELA+D RQ E+ +
Sbjct: 445 FSLKDAKNTTLHSRISSGQLQPSELGKMTNEELANDSIRQATEKAR 490
>gi|348554565|ref|XP_003463096.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Cavia porcellus]
Length = 352
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 22/194 (11%)
Query: 135 PSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKL 194
P D ++D K + + + A TD+ A + A +E +F
Sbjct: 157 PKPTGSGSDELQDPTMPTRTKCIELLYT--ALTSSFTDQANADLWQNFAREIEECIFALY 214
Query: 195 RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEI 254
K RS + N+ + +N L++ +L G ++P+ A MT ++A+ E +Q +
Sbjct: 215 SKNIKKYKTCIRSKVANLKNPRNCHLQQNLLSGTISPKEFAEMTTMDMANKELKQ----L 270
Query: 255 KAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEP 298
+A F C +P+ GT T++ +C C + NC ++ + DE
Sbjct: 271 RAAFTESCIQEHYLPQVIDGTPTNKIRCRRCERYNCKVTVIARGTLFLPSWVRNSNPDEQ 330
Query: 299 MTTYVTCAECNKRW 312
M TYV C EC ++W
Sbjct: 331 MMTYVICNECGEQW 344
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 101 SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIR----KPSHADQAKDSMRDKIRKDLEKA 156
S KF T+ AV+ ST+ + A R P+ + Q +R IR+ L++
Sbjct: 625 SASRKFPSSTASVGAVRKPGSTSVPLASPAPGRLGPVSPA-SSQPNSQIRQNIRRSLKEI 683
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L + +++ DD +T+ + +A +E+ MF R K K+RS+MFN+ D K
Sbjct: 684 LWKRVNDS-DDLIMTENEVGK----IALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPK 738
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE 246
N L RVL E++ +L M PEEL S E
Sbjct: 739 NQGLFHRVLREEISLAKLVRMKPEELVSKE 768
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 116 VKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAAD----DEEIT 171
+K S +K + +RKP + +R IRK L + LS E D DEEI
Sbjct: 1281 IKPSPSQSKLQIKPTPVRKPEA-----EPIRLNIRKTLTELLSSRIKETEDLKLTDEEIA 1335
Query: 172 DRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTP 231
D +A ++E M++ + G K K+RS++FN+ D KN L R++ +TP
Sbjct: 1336 D---------LAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTP 1386
Query: 232 ERLATMTPEELASDE 246
+ + ++P+E+AS E
Sbjct: 1387 DAVVRLSPDEMASQE 1401
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 101 SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIR----KPSHADQAKDSMRDKIRKDLEKA 156
S KF T+ AV+ ST+ + A R P+ + Q +R IR+ L++
Sbjct: 625 SASRKFPSSTASVGAVRKPGSTSVPLASPAPGRLGPVSPA-SSQPNSQIRQNIRRSLKEI 683
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L + +++ DD +T+ + +A +E+ MF R K K+RS+MFN+ D K
Sbjct: 684 LWKRVNDS-DDLIMTENEVGK----IALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPK 738
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE 246
N L RVL E++ +L M PEEL S E
Sbjct: 739 NQGLFHRVLREEISLAKLVRMKPEELVSKE 768
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 18/134 (13%)
Query: 117 KSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAAD----DEEITD 172
KS S +K++ +++P + +R IRK L + LS E D DEEI D
Sbjct: 1292 KSLPSQSKQQTKLTPVKRPE-----TEPIRLNIRKSLTELLSSRIKETEDLKLTDEEIAD 1346
Query: 173 RVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
+A ++E M++ + G K K+RS++FN+ D KN L R++ +TP+
Sbjct: 1347 ---------LAFNIELEMYKYFKDTGAKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPD 1397
Query: 233 RLATMTPEELASDE 246
+ ++P+E+AS E
Sbjct: 1398 AVVRLSPDEMASQE 1411
>gi|21756669|dbj|BAC04930.1| unnamed protein product [Homo sapiens]
Length = 217
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 164 AADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRR 223
AA TD+ KA + A +E +F K RS + N+ + +N L++
Sbjct: 50 AALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQN 109
Query: 224 VLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCS 278
+L G +P A MT E+A+ E +Q ++A + C +P+ GT T++ KC
Sbjct: 110 LLSGTTSPREFAEMTVMEMANKELKQ----LRASYTESCIQEHYLPQVIDGTQTNKIKCR 165
Query: 279 GCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
C K NC ++ + DE M TYV C EC ++W
Sbjct: 166 RCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 210
>gi|157824026|ref|NP_001102485.1| transcription elongation factor A N-terminal and central
domain-containing protein [Rattus norvegicus]
gi|149035889|gb|EDL90556.1| rCG49713 [Rattus norvegicus]
Length = 358
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 41/234 (17%)
Query: 92 GNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRK 151
G++ + +++ ++E + + S+S + SG D S+R K +
Sbjct: 145 GSESSAAQMEINEGYLEDDSESPSKSSGV-----------------LDNPLVSVRSKCIE 187
Query: 152 DLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH-RSIMF 210
L KAL+ TD K + +A +E +F L + + + + RS +
Sbjct: 188 LLYKALA---------SSCTDHTKVHFWQNLARQIEEHIF-TLHSNDIKKYKNNIRSKVA 237
Query: 211 NMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKG 270
N+++ +N L++ +L G ++ A MT ++A+ E +Q + + +P+ G
Sbjct: 238 NLNNPRNSHLQQNLLSGTISAREFAEMTVLDMANQELKQLRASYIESSIQEHHLPQIVDG 297
Query: 271 T-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
T T++ KC C K NC+ +Q + DE MT YV C EC ++W
Sbjct: 298 THTNKIKCRRCDKYNCTVTVIARGTLFLPSWVQNSNPDEQMT-YVICNECGEQW 350
>gi|215274653|sp|P0C8F8.1|TFS2_ASFWA RecName: Full=Transcription factor S-II-related protein
Length = 243
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+++ D +++ GE+ PE + +MT EL +E EI + K V EK T+
Sbjct: 149 QQDNDALNKLISGELKPEAIGSMTFAELCPSAALKEKTEITLRSQQK--VAEK---TSQL 203
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+KC C + C+Y ++QTR+ DEP T + TC +C +
Sbjct: 204 YKCPNCKQRMCTYREVQTRALDEPSTIFCTCKKCGHEF 241
>gi|9628245|ref|NP_042831.1| transcription factor SII homolog [African swine fever virus]
gi|135659|sp|P27948.1|TFS2_ASFB7 RecName: Full=Transcription factor S-II-related protein
gi|215274652|sp|P0C8F7.1|TFS2_ASFP4 RecName: Full=Transcription factor S-II-related protein
gi|210620|gb|AAA42700.1| transcription factor [African swine fever virus]
gi|780507|gb|AAA65367.1| transcription factor SII homolog [African swine fever virus]
gi|162849520|emb|CAN10487.1| Transcription factor SII homolog [African swine fever virus OURT
88/3]
gi|291289581|emb|CBH29238.1| BA71V-I243L (k9L) [African swine fever virus E75]
gi|1097530|prf||2113434EY transcription factor SII-like protein
Length = 243
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+++ D +++ GE+ PE + +MT EL +E EI + K V EK T+
Sbjct: 149 QQDNDALNKLISGELKPEAIGSMTFAELCPSAALKEKTEITLRSQQK--VAEK---TSQL 203
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+KC C + C+Y ++QTR+ DEP T + TC +C +
Sbjct: 204 YKCPNCKQRMCTYREVQTRALDEPSTIFCTCKKCGHEF 241
>gi|303398823|emb|CBW46804.1| I243L [African swine fever virus Georgia 2007/1]
Length = 243
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+++ D +++ GE+ PE + +MT EL +E EI + K V EK T+
Sbjct: 149 QQDNDALNKLISGELKPEAIGSMTFAELCPSAALKEKTEITLRSQQK--VAEK---TSQL 203
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+KC C + C+Y ++QTR+ DEP T + TC +C +
Sbjct: 204 YKCPNCKQRMCTYREVQTRALDEPSTIFCTCKKCGHEF 241
>gi|162849346|emb|CAN10237.1| transcription factor SII homolog [African swine fever virus Benin
97/1]
Length = 243
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 215 EKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQ 274
+++ D +++ GE+ PE + +MT EL +E EI + K V EK T+
Sbjct: 149 QQDNDALNKLISGELKPEAIGSMTFAELCPSAALKEKTEITLRSQQK--VAEK---TSQL 203
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
+KC C + C+Y ++QTR+ DEP T + TC +C +
Sbjct: 204 YKCPNCKQRMCTYREVQTRALDEPSTIFCTCKKCGHEF 241
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 180 KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
+ +A +E +F+ + K K RS++FN+ D+ NP LR +VL GE+TP+ L +MT
Sbjct: 336 QSLALRIEEDLFQLCGGVSKKYKEKGRSLLFNLKDKSNPVLRGQVLSGEITPKCLCSMTT 395
Query: 240 EELASDE 246
EELAS E
Sbjct: 396 EELASKE 402
>gi|24646283|ref|NP_650193.1| protein partner of snf, isoform A [Drosophila melanogaster]
gi|7299622|gb|AAF54807.1| protein partner of snf, isoform A [Drosophila melanogaster]
Length = 2016
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 98 SKLSVDEKFQKQTSDSNAVKSGCSTAKE--KKATASIRKPSH---ADQAKDSMRDKIRKD 152
+KLS + Q S + S AK+ +K T +++ P+ A + +R IR+
Sbjct: 1222 AKLSHPQNTTVQASHQLGISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPVRIGIRRS 1281
Query: 153 L-EKALSRV----ASEAADDEEITDRVKARDPKQVAASVERVMFEKL-RPMGVAEKRKHR 206
L E+ L+R+ A+E + T + Q +VE MF R +G K K+R
Sbjct: 1282 LREQLLARIKEAQAAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYR 1341
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++ +V P +L MTPE+LAS E R +EN
Sbjct: 1342 SLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEEN 1390
>gi|386765657|ref|NP_001247075.1| protein partner of snf, isoform B [Drosophila melanogaster]
gi|383292673|gb|AFH06393.1| protein partner of snf, isoform B [Drosophila melanogaster]
Length = 2018
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 98 SKLSVDEKFQKQTSDSNAVKSGCSTAKE--KKATASIRKPSH---ADQAKDSMRDKIRKD 152
+KLS + Q S + S AK+ +K T +++ P+ A + +R IR+
Sbjct: 1224 AKLSHPQNTTVQASHQLGISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPVRIGIRRS 1283
Query: 153 L-EKALSRV----ASEAADDEEITDRVKARDPKQVAASVERVMFEKL-RPMGVAEKRKHR 206
L E+ L+R+ A+E + T + Q +VE MF R +G K K+R
Sbjct: 1284 LREQLLARIKEAQAAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYR 1343
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
S+MFN+ D KN L ++ +V P +L MTPE+LAS E R +EN
Sbjct: 1344 SLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEEN 1392
>gi|348510333|ref|XP_003442700.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Oreochromis niloticus]
Length = 2408
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK 204
MR IR+ L L + ++ DD ++T+ R +A ++E+ MF K K
Sbjct: 737 MRQNIRRSLTDILYKRVCDS-DDLKMTESEVGR----LAFAIEKEMFNLCLSTDSKYKNK 791
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
+RS+MFN+ D KN L RV+ GEV+P RL ++ EEL S E
Sbjct: 792 YRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKE 833
>gi|187608701|ref|NP_001120586.1| transcription elongation factor A (SII) N-terminal and central
domain containing [Xenopus (Silurana) tropicalis]
gi|171846965|gb|AAI61589.1| LOC100145741 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 51/266 (19%)
Query: 67 EKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKEK 126
EK+ + +H +QKI++ K T+ KF SDS+A C E+
Sbjct: 107 EKLAVDIQDQVHNSEQKILINKSTSS--------PSSYKFNLNKSDSSA--QDCYGNHEE 156
Query: 127 KATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASV 186
T P + ++R K + L +AL +D E ++++ +A ++
Sbjct: 157 SVTDH-EVPKKVNAEDLALRTKCTELLYQALR-------EDSECQEKLQ-----NLAKAI 203
Query: 187 ERVMFEKLRPMGVAEKRKHR----SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEEL 242
E E + + +K+R S + N+ + KN L+ ++L ++P+ A M E+
Sbjct: 204 E----ENIYKIHAGNTKKYRNCIRSKISNLKNPKNSHLKMQILSRALSPKVFAEMGVMEM 259
Query: 243 ASDERRQENEEIKAKFMFKC----EVPEKKKGT-TDQFKCSGCGKSNCSYHQM------- 290
A DE R ++A + C ++P+ G T++ +C C K NC+ +
Sbjct: 260 ACDELRN----LRANYTETCVQEHQLPQGVDGVHTNKIRCRRCDKFNCTVTMISRGTLFL 315
Query: 291 ----QTRSADEPMTTYVTCAECNKRW 312
+T + DE M T+V C EC ++W
Sbjct: 316 PGWVRTGNPDEEMMTFVICNECGEQW 341
>gi|354493939|ref|XP_003509097.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Cricetulus griseus]
Length = 420
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH----R 206
K +E S +AS + TD K + +A +E +F + + +K+ R
Sbjct: 166 KGIELLYSALASSS------TDYTKTHLWQNLAREIEEHIF----TLHSSNIKKYKICIR 215
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+++ KN L++++L G ++ A MT ++A++E +Q + + +P+
Sbjct: 216 SKVANLNNPKNSHLQQKLLSGTMSAREFAEMTVLDMANEELKQLRASYTESSIQEHHLPQ 275
Query: 267 KKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
+GT T++ KC C K NC +Q + DE MT YV C EC ++W
Sbjct: 276 TVEGTQTNKIKCRRCEKYNCKITVIARGTLFLPSWVQNSNPDEQMT-YVICNECGEQW 332
>gi|448925723|gb|AGE49302.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus Br0604L]
Length = 185
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK-----CEVPEKKKGTT 272
PD+ ++ G + ++ P E+ E+ +E E AK + C P K
Sbjct: 87 PDILEQMKAGNASIKQFVYAKPYEICP-EKWEEAFEQAAKRTLRFSDASCMDP--KDMPD 143
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG SY+++QTRSADEPMT + C EC RWK
Sbjct: 144 GMLQCRKCGSKKTSYYELQTRSADEPMTVFARCHECPNRWK 184
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 19/134 (14%)
Query: 117 KSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAAD----DEEITD 172
K S K+ K T ++KP + +R IRK L + LS E D DEEI D
Sbjct: 115 KPSPSQLKQTKLTP-VKKPE-----TEPIRVNIRKTLTELLSSRIKETEDLKLTDEEIAD 168
Query: 173 RVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
+A ++E M++ + G K K+RS++FN+ D KN L R++ +TP+
Sbjct: 169 ---------LAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPD 219
Query: 233 RLATMTPEELASDE 246
+ ++P+E+AS E
Sbjct: 220 AVVRLSPDEMASQE 233
>gi|440295289|gb|ELP88202.1| transcription elongation factor S-II, putative [Entamoeba invadens
IP1]
Length = 169
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE------RRQENEEIKAKFM 259
R ++ N+ +KN L+ + EVT + + M ELA DE R ++EE K K +
Sbjct: 61 RMLLSNL--KKNQKLKDSIEKDEVTVKEVVGMNSYELADDEVKKLKNRVMKDEEDKKKPL 118
Query: 260 FKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
++P+ +F C C Q+Q RSADEPMT +TCA C WK
Sbjct: 119 DISKIPDH------EFSCPKCSSRKIQETQVQLRSADEPMTRILTCANCGFGWK 166
>gi|350631410|gb|EHA19781.1| hypothetical protein ASPNIDRAFT_119842 [Aspergillus niger ATCC
1015]
Length = 891
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q++ S+E M+E + G E + + R+IMFN+ +KNP LR R+L+G ++P+ L
Sbjct: 331 RQLSLSLESAMYENIC-GGTGEPTEPYRSQLRTIMFNV--KKNPSLRDRLLVGSLSPDAL 387
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 388 SKMSTQDMASEELQQKDAEIK 408
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 113 SNAVKSGCSTAKEKKATASIRKPSHADQAKDSMR---DKIRKDLEKALSRVASEAADD-- 167
+ AV+ GC + A R+P D +D + + +K L+ + A +
Sbjct: 492 AGAVRPGCGPVE-----AEDREPGERDGGEDPAQLQPQQEKKPLDIGVRGTVVRAMQEVL 546
Query: 168 ----EEITDRVKARDP-KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRR 222
+E+ D V + + + +AA +E +F+ + K K+RS++FN+ D +NPDL
Sbjct: 547 WSRLQELPDLVLSEEAVEGIAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFL 606
Query: 223 RVLIGEVTPERLATMT-----PEELA---SDERRQENEEIKAKFMFKCEVPEKK 268
+V+ G+VTP+ L M+ P+ LA E ++ E I+ + C++P K
Sbjct: 607 KVVHGDVTPQGLVQMSSIQLAPQRLAHWRDQEEKRGLEIIEQQQKEPCQLPASK 660
>gi|194044760|ref|XP_001927509.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Sus scrofa]
gi|194044762|ref|XP_001927499.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Sus scrofa]
gi|194044764|ref|XP_001927522.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Sus scrofa]
gi|311275938|ref|XP_003134981.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275940|ref|XP_003134982.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275942|ref|XP_003134980.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
Length = 352
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC--- 262
RS + N+ + +N LR +L G ++P A MT ++AS E +Q ++A + C
Sbjct: 226 RSKIANLKNPRNSHLRENLLSGIMSPRAFAEMTVMDMASKELKQ----LRASYTESCIQE 281
Query: 263 -EVPEKKKGT-TDQFKCSGCGKSNCS---------YHQMQTRSA--DEPMTTYVTCAECN 309
+P+ +GT T + +C C K NC + R+A DE + TYV C EC
Sbjct: 282 HSLPQGVEGTPTKKVRCRRCEKFNCQVTVIARGALFLPSWVRNAKPDEELMTYVICKECG 341
Query: 310 KRW 312
++W
Sbjct: 342 EQW 344
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 113 SNAVKSGCSTAKEKKATASIRKPSHADQAKD----------------SMRDKIRKDL-EK 155
+ A KS S K + + P HA KD +R +R+ L E+
Sbjct: 1390 TTATKSSPSGTKVPQLQRVLTPPIHALPKKDKPPANVVASQSPFKPEPIRLNVRRTLKEQ 1449
Query: 156 ALSRV-----ASEAADDEEITDRVKARDPKQVAASVERVMFEKLR-PMGVAEKRKHRSIM 209
L+R+ A ++A T + + +Q SVE M+ +G K K+RS+M
Sbjct: 1450 LLARIKEAHDAEQSAGTSTTTQWLTPIEAEQFVKSVESEMYNSFGCDVGSKYKSKYRSLM 1509
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDER---RQENEEIKAKFMFKCEV 264
FN+ D KN L ++ +V P++L MTPEELAS E RQE + + + K E+
Sbjct: 1510 FNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELASQELAKWRQEEARHQLEIIEKSEL 1567
>gi|317032975|ref|XP_001394653.2| PHD finger domain protein [Aspergillus niger CBS 513.88]
Length = 903
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q++ S+E M+E + G E + + R+IMFN+ +KNP LR R+L+G ++P+ L
Sbjct: 343 RQLSLSLESAMYENIC-GGTGEPTEPYRSQLRTIMFNV--KKNPSLRDRLLVGSLSPDAL 399
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 400 SKMSTQDMASEELQQKDAEIK 420
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
Query: 13 KKAADAAAATNRSEPEVQRCADALKHLQAFPVTYDLLVSTQ-----VGKSLRHL------ 61
K AA +++ +S E +R D K PVT ++ ST VGK L
Sbjct: 548 KTAAISSSLLYKSMKEEKRMED--KMATPLPVTKKVIPSTSTSTSVVGKQTSSLPRNLVS 605
Query: 62 KKHPC--------EKVQNAASELLHIWKQKIVLGKETNGN----KRNGSKLSVDEKFQKQ 109
KK P + V+N+ + +K L +GN K++G + K+
Sbjct: 606 KKAPSFINASVTKQAVKNSPGGFKGVIPKKSWLSGSPSGNVSNTKQSGLASASVASASKK 665
Query: 110 TSDSNAVKSGCS---TAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAAD 166
+ S+ + G T A++S S A ++ +IR+++ ++L + + +
Sbjct: 666 LNVSSTLAGGPRKPVTPTANPASSSTTGKSGASPSQSQPNSQIRQNIRRSLKEILWKRVN 725
Query: 167 DEEITDRVKARDP-KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVL 225
D + D + + ++A +E+ MF + K K+RSIMFN+ D KN L RVL
Sbjct: 726 DSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVL 783
Query: 226 IGEVTPERLATMTPEELASDE 246
E++ +L M PEEL S E
Sbjct: 784 REEISLAKLVRMKPEELVSKE 804
>gi|134079343|emb|CAK96972.1| unnamed protein product [Aspergillus niger]
Length = 955
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q++ S+E M+E + G E + + R+IMFN+ +KNP LR R+L+G ++P+ L
Sbjct: 395 RQLSLSLESAMYENIC-GGTGEPTEPYRSQLRTIMFNV--KKNPSLRDRLLVGSLSPDAL 451
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 452 SKMSTQDMASEELQQKDAEIK 472
>gi|448926050|gb|AGE49628.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus Can0610SP]
Length = 221
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK-----CEVPEKKKGTT 272
PD+ ++ G + ++ P E+ E+ +E E AK + C P K
Sbjct: 123 PDILEQMKAGTASIKQFVYAKPYEICP-EKWEEAFEQAAKRTLRFSDASCMDP--KDMPD 179
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG SY+++QTRSADEPMT + C EC RWK
Sbjct: 180 GMLQCRKCGSKKTSYYELQTRSADEPMTVFARCHECPNRWK 220
>gi|431894600|gb|ELK04400.1| Death-inducer obliterator 1 [Pteropus alecto]
Length = 1849
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + S++ DD +T+ R VA +E+ +F R
Sbjct: 630 QPNSQIRQNIRRSLKEILWKRVSDS-DDLIMTESEVGR----VALRIEKELFNLFRVTDN 684
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENE------- 252
K K+RS+MFN+ D KN L RVL E++ +L M PEEL S E E
Sbjct: 685 RYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWKERPTRPVM 744
Query: 253 EIKAKFM 259
E +AKF+
Sbjct: 745 EPRAKFL 751
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 168 EEITDRVKARDPKQ-VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLI 226
+E+ D V + + + +AA +E +F + K K+RS++FN+ D +NPDL +V+
Sbjct: 578 QELPDLVLSEEAVEGIAAGIETALFNLTQTTSCRYKTKYRSLLFNLRDPRNPDLFLKVVR 637
Query: 227 GEVTPERLATMTPEELASDE 246
G+VTPE L M+ +LA E
Sbjct: 638 GDVTPEDLVQMSSIQLAPQE 657
>gi|302842544|ref|XP_002952815.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
gi|300261855|gb|EFJ46065.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
Length = 233
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 129 TASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDP--KQVAASV 186
TA+ +P+ + A+ +R + L ALS + + + D D + +A ++
Sbjct: 22 TAASARPARQEAAQQELRSSCVRTLFSALSTPSPDGGQQQPSVDEADLGDAAVEPLAQAI 81
Query: 187 ERVMF-------EKLRPMGVAE---KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
ER +F ++ + V + K R+++ ++ ++N DLRRRVL G+V P+ L
Sbjct: 82 ERELFFRHHHQRQQQQQQSVTDQEYKAAARTLVASL--KRNADLRRRVLSGQVRPDELVG 139
Query: 237 MTPEELASDERRQENEEIKAKFMFKCEVPEKKKG---TTDQFKCSGCGKSNCSYHQMQTR 293
M +LA+ ++++E ++ + + + +T + C CG +C Y R
Sbjct: 140 MGVRQLATPQQQEEYARLQERETRRVTLAGHGSAASISTSDYVCGRCGGRSCDYLDSGRR 199
Query: 294 ---------SADEPMTT-YVTCAECNKRWK 313
S D P ++ VTC C RW+
Sbjct: 200 DIGKCETWGSKDGPGSSRLVTCLGCGHRWE 229
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E +F+ + K K+RS++FN+ D +NPDL +VL G+VTP L M+ +
Sbjct: 602 IAADIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVLQGDVTPHGLVRMSSTQ 661
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCS 278
LA E + ++ + + + E +KK + FK +
Sbjct: 662 LAPQELARWRDQEEKRGLEIIEQQQKKPCSLPAFKLT 698
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 145 MRDKIRKDLEKALSRVASEAAD----DEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
+R IRK L + LS E D DEEI D +A ++E +++ + G
Sbjct: 1269 IRLNIRKTLTELLSSRIKETEDLKLTDEEIAD---------LAYNIELELYKYFKDTGAK 1319
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RS++FN+ D KN L R++ +TP+ + ++P+E+AS E
Sbjct: 1320 YKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQE 1365
>gi|326913628|ref|XP_003203138.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Meleagris gallopavo]
Length = 381
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 138 ADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPM 197
A +D MR +R L + + +A D+E TD+ +++ +E +F
Sbjct: 193 AGLQQDHMR-ALRCKCTDLLYKALTGSAKDKEETDKWL-----ELSKEIEEHVFALHSKN 246
Query: 198 GVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAK 257
K RS + N+ + K+ +L+ + G ++P+ A MT E+ASDE +Q
Sbjct: 247 DRKYKNCIRSKISNLKNPKSCNLKHNLFSGTLSPKAFAEMTVMEMASDELKQLRALYTES 306
Query: 258 FMFKCEVPEKKKGT-TDQFKCSGCGKSNCSYHQM-----------QTRSADEPMTTYVTC 305
+ + ++P+ GT T + KC C K +C+ + + + DE M T+V C
Sbjct: 307 SIQEHQLPQVINGTQTSKIKCRRCEKFDCTVTMIARGTLFLPGWVRNTNPDEQMLTFVIC 366
Query: 306 AECNKRW 312
EC ++W
Sbjct: 367 NECGEQW 373
>gi|166796454|gb|AAI59331.1| Unknown (protein for IMAGE:8927043) [Xenopus (Silurana) tropicalis]
Length = 1162
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 98 SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKP-SHADQAKDS---------MRD 147
SKL + +K S S V G + TA+ +P S Q+ S +R
Sbjct: 563 SKLPLGQKKSAAPSPSTKVAMG---NPPPRPTANTSQPTSSTPQSAQSSSHPVPNMQIRQ 619
Query: 148 KIRKDLEKAL-SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
IR+ L++ L RV +DD + + AR +A ++ER MF R K K+R
Sbjct: 620 NIRRSLKQILWKRVID--SDDLVMVENEVAR----IATNIEREMFNLYRDTDSRYKAKYR 673
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
+IMFN+ D KN L RVL E+ +L + PEELAS
Sbjct: 674 NIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELAS 711
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 2209
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 98 SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKP-SHADQAKDS---------MRD 147
SKL + +K S S V G + TA+ +P S Q+ S +R
Sbjct: 576 SKLPLGQKKSAAPSPSTKVAMGNPPPR---PTANTSQPTSSTPQSAQSSSHPVPNMQIRQ 632
Query: 148 KIRKDLEKAL-SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
IR+ L++ L RV +DD + + AR +A ++ER MF R K K+R
Sbjct: 633 NIRRSLKQILWKRVID--SDDLVMVENEVAR----IATNIEREMFNLYRDTDSRYKAKYR 686
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
+IMFN+ D KN L RVL E+ +L + PEELAS
Sbjct: 687 NIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELAS 724
>gi|344242373|gb|EGV98476.1| hypothetical protein I79_017137 [Cricetulus griseus]
Length = 676
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 151 KDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKH----R 206
K +E S +AS + TD K + +A +E +F + + +K+ R
Sbjct: 502 KGIELLYSALASSS------TDYTKTHLWQNLAREIEEHIF----TLHSSNIKKYKICIR 551
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPE 266
S + N+++ KN L++++L G ++ A MT ++A++E +Q + + +P+
Sbjct: 552 SKVANLNNPKNSHLQQKLLSGTMSAREFAEMTVLDMANEELKQLRASYTESSIQEHHLPQ 611
Query: 267 KKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECNKRW 312
+GT T++ KC C K NC +Q + DE MT YV C EC ++W
Sbjct: 612 TVEGTQTNKIKCRRCEKYNCKITVIARGTLFLPSWVQNSNPDEQMT-YVICNECGEQW 668
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + VA ++E+ MF +
Sbjct: 683 QPNSQIRQNIRRSLKEILWKRVNDS-DDLVMTESEVGK----VALNIEKEMFNLFQGTDN 737
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 738 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLSKLVRMKPEELLSKE 784
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 2281
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 98 SKLSVDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKP-SHADQAKDS---------MRD 147
SKL + +K S S V G + TA+ +P S Q+ S +R
Sbjct: 648 SKLPLGQKKSAAPSPSTKVAMGNPPPR---PTANTSQPTSSTPQSAQSSSHPVPNMQIRQ 704
Query: 148 KIRKDLEKAL-SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHR 206
IR+ L++ L RV +DD + + AR +A ++ER MF R K K+R
Sbjct: 705 NIRRSLKQILWKRVID--SDDLVMVENEVAR----IATNIEREMFNLYRDTDSRYKAKYR 758
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
+IMFN+ D KN L RVL E+ +L + PEELAS
Sbjct: 759 NIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELAS 796
>gi|335775536|gb|AEH58605.1| transcription elongation factor A N-terminal an central
domain-containing protein-like protein [Equus caballus]
Length = 353
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC--- 262
RS + N+ + KN L+ +L G ++P A M+ E+AS E +Q ++A + C
Sbjct: 227 RSKVANLKNPKNSHLQENLLSGALSPREFAEMSVMEMASKELKQ----LRACYTESCIQE 282
Query: 263 -EVPEKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECN 309
+P+ +G+ T + KC C K NC ++ + DE M TYV C EC
Sbjct: 283 HHLPQVMEGSQTKKIKCRRCEKFNCQVTVIARGTLFLPSWVRNSNPDEEMMTYVICNECG 342
Query: 310 KRW 312
++W
Sbjct: 343 EQW 345
>gi|238501684|ref|XP_002382076.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
gi|220692313|gb|EED48660.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
Length = 924
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+A S+E M+E G E K + R+I+FN+ +KNP LR R+L+G + P+ L
Sbjct: 377 RQLALSIENAMYENFC-GGSGETTEQYKAQLRTILFNV--KKNPSLRDRLLVGSLLPDTL 433
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 434 SKMSSQDMASEELQQKDAEIK 454
>gi|391863799|gb|EIT73098.1| putative transcription factor [Aspergillus oryzae 3.042]
Length = 903
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+A S+E M+E G E K + R+I+FN+ +KNP LR R+L+G + P+ L
Sbjct: 356 RQLALSIENAMYENFC-GGSGETTEQYKAQLRTILFNV--KKNPSLRDRLLVGSLLPDTL 412
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 413 SKMSSQDMASEELQQKDAEIK 433
>gi|83766945|dbj|BAE57085.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 761
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+A S+E M+E G E K + R+I+FN+ +KNP LR R+L+G + P+ L
Sbjct: 290 RQLALSIENAMYENFC-GGSGETTEQYKAQLRTILFNV--KKNPSLRDRLLVGSLLPDTL 346
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 347 SKMSSQDMASEELQQKDAEIK 367
>gi|338729178|ref|XP_001489012.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Equus caballus]
Length = 381
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC--- 262
RS + N+ + KN L+ +L G ++P A M+ E+AS E +Q ++A + C
Sbjct: 255 RSKVANLKNPKNSHLQENLLSGALSPREFAEMSVMEMASKELKQ----LRACYTESCIQE 310
Query: 263 -EVPEKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECN 309
+P+ +G+ T + KC C K NC ++ + DE M TYV C EC
Sbjct: 311 HHLPQVMEGSQTKKIKCRRCEKFNCQVTVIARGTLFLPSWVRNSNPDEEMMTYVICNECG 370
Query: 310 KRW 312
++W
Sbjct: 371 EQW 373
>gi|303277747|ref|XP_003058167.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460824|gb|EEH58118.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 920
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS---DERRQENEEIKAKFMF 260
K R+++FN+ D NP LR RVL GE+TP+ L ++P ELA E R+E E + + F
Sbjct: 198 KARTLIFNLKDPSNPHLRGRVLRGELTPQVLCVLSPTELARKDLQEMRREREALVGEDAF 257
Query: 261 KCEVPEKKKGTTDQ 274
E PE+ + T++
Sbjct: 258 LKETPEELRTRTNR 271
>gi|448936359|gb|AGE59907.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus TN603.4.2]
Length = 185
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK-----CEVPEKKKGTT 272
PD+ ++ G + ++ P E+ E+ +E E AK + C P K
Sbjct: 87 PDVLEQMKAGTASIKQFVYAKPYEICP-EKWEEAFEKAAKRTLRFSDASCMDP--KDMPD 143
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG SY+++QTRSADEPMT + C EC RWK
Sbjct: 144 GMLQCRKCGSKKTSYYELQTRSADEPMTVFARCHECPNRWK 184
>gi|255932231|ref|XP_002557672.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582291|emb|CAP80469.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 877
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKL-----RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+A S+E M+E + P A K + RSIMFN+ +KN LR R+LIG ++P+ L
Sbjct: 371 QQLALSIEDAMYESICGRTGEP-NEAYKAQLRSIMFNV--KKNASLRDRLLIGSLSPKLL 427
Query: 235 ATMTPEELASDERRQENEEIK 255
+ MT E+AS E +Q++ EIK
Sbjct: 428 SQMTTAEMASKELQQKDAEIK 448
>gi|317142778|ref|XP_001819087.2| PHD finger domain protein [Aspergillus oryzae RIB40]
Length = 896
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+A S+E M+E G E K + R+I+FN+ +KNP LR R+L+G + P+ L
Sbjct: 349 RQLALSIENAMYENFC-GGSGETTEQYKAQLRTILFNV--KKNPSLRDRLLVGSLLPDTL 405
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 406 SKMSSQDMASEELQQKDAEIK 426
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 113 SNAVKSGCSTAKEKKATASIRKPSHADQAKD----------------SMRDKIRKDL-EK 155
+ A KS S K + + P HA KD +R +R+ L E+
Sbjct: 1392 TTATKSSPSGTKVPQLQRVLTPPIHALPKKDKPPANVVASQSPFKPEPIRLNVRRTLKEQ 1451
Query: 156 ALSRV-----ASEAADDEEITDRVKARDPKQVAASVERVMFEKLR-PMGVAEKRKHRSIM 209
L+R+ A ++A T + + +Q SVE M+ +G K K+RS+M
Sbjct: 1452 LLARIKEAHDAEQSAGTSTTTQWLTPIEAEQFVKSVESEMYNSFGCDVGSKYKSKYRSLM 1511
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEE 253
FN+ D KN L ++ +V P++L MTPEELAS E + EE
Sbjct: 1512 FNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELASQELAKWREE 1555
>gi|426241849|ref|XP_004023383.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Ovis aries]
Length = 1927
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 101 SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIR----KPSHADQAKDSMRDKIRKDLEKA 156
S KF + AV+ ST+ + A R P+ + Q +R IR+ L++
Sbjct: 573 SASRKFPSSAASVGAVRKPGSTSVSLASPAPGRLGPVSPA-SSQPNSQIRQNIRRSLKEI 631
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L + +++ DD +T+ + +A +E+ MF R K K+RS+MFN+ D K
Sbjct: 632 LWKRVNDS-DDLIMTENEVGK----IALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPK 686
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE 246
N L RVL E++ +L M PEEL S E
Sbjct: 687 NQGLFHRVLREEISLAKLVRMKPEELVSKE 716
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 145 MRDKIRKDLEKAL-SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR 203
+R IR+ L++ L RV +DD + + AR +A+++ER MF R K
Sbjct: 634 IRQNIRRSLKEILWKRVID--SDDLVMVENEVAR----IASNIEREMFNLYRDTDSRYKS 687
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
K+R+IMFN+ D KN L RVL E++ +L + PE+LAS
Sbjct: 688 KYRNIMFNLKDPKNQGLYHRVLKEEISLAKLVRLKPEDLAS 728
>gi|239611404|gb|EEQ88391.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 873
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 15/151 (9%)
Query: 117 KSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE--AADDEEITDRV 174
K S+A+ + S R PS ++ R+++ AL ++ E A ++ T +
Sbjct: 228 KQSVSSAQSAQEQRSGRSPSEGAGGPSDLQSVARRNVANALVKLFVEQAALAQQQGTYTM 287
Query: 175 KARDPKQ-----VAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRV 224
A K+ + ++E M++ L G E K++ R+I+FN+ KN LR +
Sbjct: 288 PAGKTKEAVGEPLGLAIELAMYKHLC-GGAGEPSEAYKQQMRTILFNV--RKNTSLRDSL 344
Query: 225 LIGEVTPERLATMTPEELASDERRQENEEIK 255
L+G ++P+ LATM+ +++AS E RQ+++EIK
Sbjct: 345 LVGSISPDALATMSTQDMASKELRQKDDEIK 375
>gi|261205282|ref|XP_002627378.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239592437|gb|EEQ75018.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 873
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 15/151 (9%)
Query: 117 KSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE--AADDEEITDRV 174
K S+A+ + S R PS ++ R+++ AL ++ E A ++ T +
Sbjct: 228 KQSVSSAQSAQEQRSGRSPSEGAGGPSDLQSVARRNVANALVKLFVEQAALAQQQGTYTM 287
Query: 175 KARDPKQ-----VAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRV 224
A K+ + ++E M++ L G E K++ R+I+FN+ KN LR +
Sbjct: 288 PAGKTKEAVGEPLGLAIELAMYKHLC-GGAGEPSEAYKQQMRTILFNV--RKNTSLRDSL 344
Query: 225 LIGEVTPERLATMTPEELASDERRQENEEIK 255
L+G ++P+ LATM+ +++AS E RQ+++EIK
Sbjct: 345 LVGSISPDALATMSTQDMASKELRQKDDEIK 375
>gi|119470088|ref|XP_001258016.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
gi|119406168|gb|EAW16119.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
Length = 884
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 112 DSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEIT 171
DSNA S S+ EK AT D + + R+ AL ++ + D +
Sbjct: 256 DSNAPPSRQSSVSEKTAT-------QESGTLDEISNPARRSAASALVKLFVDQISDAQKQ 308
Query: 172 DRVK---ARDPKQVAA----SVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPD 219
K R K++A S+E+ M++ + G E K + R+I+FN+ +KNP
Sbjct: 309 GFFKLPEGRSAKEIAQQLGFSIEKAMYQNIC-GGSGEPTEPYKLQLRTILFNV--KKNPS 365
Query: 220 LRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
LR R+L+G + P+ L+ M+ +++AS+E +Q++ EIK
Sbjct: 366 LRDRLLVGSLLPDALSKMSSQDMASEELQQKDAEIK 401
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 658 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTESEVGK----IALHIEKEMFNLFQVTDN 712
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K ++RSIMFN+ D KN L RVL E++ +L M PEELAS E
Sbjct: 713 RYKSRYRSIMFNLKDPKNQGLFHRVLREEISSAKLVRMKPEELASKE 759
>gi|448935448|gb|AGE58998.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus OR0704.2.2]
Length = 180
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK---- 255
A +K S+ +N+ + PDL ++ G+ + P E+ SD+ + E
Sbjct: 66 AYTQKILSVRYNL--KLRPDLMDKMKTGDCSIRWFVNAKPWEICSDKWTEAFEAAARRAL 123
Query: 256 ----AKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKR 311
A M ++P+ CS C SY++MQTRSADEPMT + C C R
Sbjct: 124 RFSDASSMDPADMPDG------MLTCSKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSR 177
Query: 312 WK 313
WK
Sbjct: 178 WK 179
>gi|440796699|gb|ELR17808.1| transcription factor SII (TFIIS) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 168
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 206 RSIMFNMSDEK--NPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
S+ N+ D K NP L + +LI ++ E+LATM ++ +K K E
Sbjct: 65 HSMHTNLIDAKGHNPQLHKSMLISIMSLEQLATMRHTDMFPSL---HTRTLKPK-----E 116
Query: 264 VPEKKKGTTDQFKCS--GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
V K K + F+C+ C +Y+Q+QTRSA++P+TT++ C +CN +++
Sbjct: 117 V-AKPKCSHGMFQCNKRDCHSWFTTYYQLQTRSANKPLTTFMQCTQCNNQYR 167
>gi|448933550|gb|AGE57106.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus NE-JV-3]
Length = 221
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK-----CEVPEKKKGTT 272
PD+ ++ G + ++ P E+ E+ +E E AK + C P K
Sbjct: 123 PDILEQMKAGTASIKQFVYAKPYEICP-EKWEEAFEQAAKRTLRFSDASCMDP--KDMPD 179
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C CG SY+++QTRSADEPMT + C EC RWK
Sbjct: 180 GMLTCRKCGSKKTSYYELQTRSADEPMTVFARCHECPNRWK 220
>gi|37359898|dbj|BAC97927.1| mKIAA0333 protein [Mus musculus]
Length = 1201
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 680 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 734
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 735 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 781
>gi|327348586|gb|EGE77443.1| PHD finger domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 897
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 15/151 (9%)
Query: 117 KSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAAD--DEEITDRV 174
K S+A+ + S R PS ++ R+++ AL ++ E A ++ T +
Sbjct: 252 KQSVSSAQSAQEQRSGRSPSEGAGGPSDLQSVARRNVANALVKLFVEQAALAQQQGTYTM 311
Query: 175 KARDPKQ-----VAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRV 224
A K+ + ++E M++ L G E K++ R+I+FN+ KN LR +
Sbjct: 312 PAGKTKEAVGEPLGLAIELAMYKHLC-GGAGEPSEAYKQQMRTILFNV--RKNTSLRDSL 368
Query: 225 LIGEVTPERLATMTPEELASDERRQENEEIK 255
L+G ++P+ LATM+ +++AS E RQ+++EIK
Sbjct: 369 LVGSISPDALATMSTQDMASKELRQKDDEIK 399
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E +F+ + K K+RS++FN+ D +NPDL +V+ G++TP L M+ +
Sbjct: 582 IAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDITPHGLVQMSSMQ 641
Query: 242 LASDE--RRQENEE 253
LA E R ++ EE
Sbjct: 642 LAPQELARWRDQEE 655
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 101 SVDEKFQKQTSDSNAVKSGCSTAKEKKATASIR----KPSHADQAKDSMRDKIRKDLEKA 156
S KF + AV+ ST+ + A R P+ + Q +R IR+ L++
Sbjct: 625 SASRKFPSSAASVGAVRKPGSTSVPLASPAPGRLGPVSPA-SSQPNSQIRQNIRRSLKEI 683
Query: 157 LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEK 216
L + +++ DD +T+ + +A +E+ MF R K K+RS+MFN+ D K
Sbjct: 684 LWKRVNDS-DDLIMTENEVGK----IALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPK 738
Query: 217 NPDLRRRVLIGEVTPERLATMTPEELASDE 246
N L RVL E++ +L M PEEL S E
Sbjct: 739 NQGLFHRVLREEISLAKLVRMKPEELVSKE 768
>gi|425778300|gb|EKV16434.1| hypothetical protein PDIP_35810 [Penicillium digitatum Pd1]
gi|425780677|gb|EKV18681.1| hypothetical protein PDIG_07750 [Penicillium digitatum PHI26]
Length = 880
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKL-----RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+A S+E M+E + P + K + RSIMFN+ +KN LR R++IG ++P+ L
Sbjct: 367 QQLALSIEDAMYESICGRSGEP-NESYKAQLRSIMFNV--KKNASLRDRLIIGSLSPKLL 423
Query: 235 ATMTPEELASDERRQENEEIK 255
+ MT E+AS+E +Q++ EIK
Sbjct: 424 SQMTTAEMASEELQQKDAEIK 444
>gi|441432414|ref|YP_007354456.1| TFII-like transcription factor [Acanthamoeba polyphaga moumouvirus]
gi|371944878|gb|AEX62699.1| transcription factor S-II-related protein [Moumouvirus Monve]
gi|440383494|gb|AGC02020.1| TFII-like transcription factor [Acanthamoeba polyphaga moumouvirus]
Length = 170
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 25/120 (20%)
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGE--VTPERLATMTPEELASDERRQENEEIKAKFMFKC 262
+R++ FN+ + + + LI E LA + P+EL D IK
Sbjct: 62 YRNLAFNLKENCDTIKEIKQLISEDKYNAYNLAFLKPDELNKDNW------IK------- 108
Query: 263 EVPEKKKGTTDQFK---------CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ +KK T ++ C C + Y Q+QTRSADEPMTT+ TC +CNK +K
Sbjct: 109 -IISRKKTTEEKLNDLPAVEWKPCRACKNTEYFYRQLQTRSADEPMTTFYTCKKCNKTYK 167
>gi|51571541|ref|NP_808520.2| death-inducer obliterator 1 isoform 2 [Mus musculus]
gi|187951163|gb|AAI38714.1| Death inducer-obliterator 1 [Mus musculus]
gi|187952021|gb|AAI38713.1| Death inducer-obliterator 1 [Mus musculus]
Length = 1183
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 662 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 716
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 717 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 168 EEITDRVKARDPKQ-VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLI 226
+E+ D V + + + +AA +E +F+ + K K+RS++FN+ D +NPDL +V+
Sbjct: 578 QELPDLVLSEEAVEGIAAGIETALFDLTQATSCRYKTKYRSLLFNLRDPRNPDLFLKVVQ 637
Query: 227 GEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGK 282
G+VTP L M+ +LA E + ++ + + + E +K+ + FK + G+
Sbjct: 638 GDVTPHDLVRMSTAQLAPQELARWRDQEEKRGLEIIEQQQKEPCSLPAFKLTHKGE 693
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 135 PSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKL 194
PS + Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF
Sbjct: 697 PSQS-QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLF 750
Query: 195 RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
+ K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 751 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 802
>gi|444509110|gb|ELV09184.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Tupaia chinensis]
Length = 351
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE-- 263
RS + N+ + KN L++ +L G ++P A M E+AS E +Q ++A + C
Sbjct: 225 RSKVANLKNPKNSHLQQNLLSGTMSPREFAKMNVMEMASQELKQ----LRASYTESCIQE 280
Query: 264 --VPEKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAECN 309
+P+ GT T++ KC C NC ++ + DE M YV C EC
Sbjct: 281 HCLPQTIDGTPTNKIKCRRCENYNCKVTLITRGTLFLPSWVRNSNPDEQMMNYVICNECG 340
Query: 310 KRW 312
++W
Sbjct: 341 EQW 343
>gi|121699592|ref|XP_001268072.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119396214|gb|EAW06646.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 853
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKL-----RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+ S+E+ M++ + P A K + R+++FN+ +KNP LR R+L+G + P++L
Sbjct: 292 QQLGLSIEKAMYQNICGGSGEPTE-AYKLQLRTVLFNV--KKNPSLRDRLLVGSLLPDKL 348
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 349 SQMSSQDMASEELQQKDAEIK 369
>gi|28204843|gb|AAH44755.1| Dido1 protein [Mus musculus]
Length = 643
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 122 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 176
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 177 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 223
>gi|351702318|gb|EHB05237.1| Transcription elongation factor A and central domain-containing
protein [Heterocephalus glaber]
Length = 353
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK 204
MR K + L AL+ + TD+ A + A +E +F K
Sbjct: 175 MRTKCIELLYSALTSYS---------TDQANADLWQNFAREIEEHIFTLYSKNIKKYKTC 225
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKC-- 262
RS + N+ + +N L++ +L ++P+ A MT E+A+ E +Q ++A + C
Sbjct: 226 IRSKVANLKNPRNCHLQQNLLSRTMSPKEFAEMTAMEMANKELKQ----LRAAYTQSCIQ 281
Query: 263 --EVPEKKKGT-TDQFKCSGCGKSNCSY-----------HQMQTRSADEPMTTYVTCAEC 308
+P+ GT T++ KC C K NC ++ + DE M TYV C EC
Sbjct: 282 DHYLPQVTDGTQTNKIKCRRCEKYNCKVTAIARGTLFLPSWVRNSNPDEQMMTYVICNEC 341
Query: 309 NKRW 312
++W
Sbjct: 342 GEQW 345
>gi|448927837|gb|AGE51409.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CviKI]
Length = 180
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD--ERRQENEEIKAKFMFKCEV 264
S+ +N+ + DL ++ GE + + P E+ + E+ E+ KA
Sbjct: 73 SVRYNIGLRQ--DLLEKMKTGETSIKNFVNAKPWEICPEKWEKAFEDAAKKALRFTDASA 130
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ K +C C SY++MQTRSADEPMT + C C RWK
Sbjct: 131 MDPKDMPDGMLQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHSCGSRWK 179
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A ++E+ MF
Sbjct: 827 QPNSQIRQNIRRSLKEILWKRVNDS-DDLVMTESEVGK----IALNIEKEMFNLFHATDN 881
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL ++ RL M PEEL S E
Sbjct: 882 RYKSKYRSIMFNLKDPKNQGLFHRVLREDLPLSRLVRMKPEELLSKE 928
>gi|155370263|ref|YP_001425797.1| hypothetical protein FR483_N165L [Paramecium bursaria Chlorella
virus FR483]
gi|155123583|gb|ABT15450.1| hypothetical protein FR483_N165L [Paramecium bursaria Chlorella
virus FR483]
Length = 180
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM-FKCEVPEKKKGTTD-QF 275
PDL ++ G+ + P E+ SD+ E K + F + D
Sbjct: 82 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARKTLRFSDASSMDPENMPDGML 141
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C SY++MQTRSADEPMT + C C RWK
Sbjct: 142 TCGKCKSRKTSYYEMQTRSADEPMTVFAKCHTCGSRWK 179
>gi|297822507|ref|XP_002879136.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297826173|ref|XP_002880969.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324975|gb|EFH55395.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297326808|gb|EFH57228.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 324
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
+V LF AAKKAAD A A + E RC DAL L +T ++ L L
Sbjct: 222 MVKLFEAAKKAADVANAKGVLSGKAEASRCVDALSLLMEINITPKPKEPRRMMDKLEGLT 281
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH K+ +AAS LLH+W+Q+I
Sbjct: 282 KHKDRKICHAASALLHLWRQRI 303
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 15 AADAAAATNRSEPEVQRCADALKHLQAFPVTY-DLLVSTQVGKSLRHLKKHPCEKVQNAA 73
AA A R+ EV+RC D LKHL++ ++ D+ +S + K L L+ H +++ A
Sbjct: 26 AAIKATYNTRNPCEVERCIDVLKHLKSLSLSAKDIELSESIVK-LETLRSHRNPRIRKEA 84
Query: 74 SELLHIW 80
L H W
Sbjct: 85 QALFHSW 91
>gi|448934258|gb|AGE57812.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus NTS-1]
Length = 185
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG SY++MQTRS DEPMT Y C C RWK
Sbjct: 146 LQCRKCGSKKTSYYEMQTRSCDEPMTVYARCHACTNRWK 184
>gi|1085870|pir||S47663 transcription elongation factor TFIIS homolog - Chlorella virus
CV-K2
gi|565274|dbj|BAA04187.1| transcription elongation factor SII [Chlorella virus]
gi|448928857|gb|AGE52426.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CvsA1]
gi|448931619|gb|AGE55180.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus MA-1E]
Length = 180
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 219 DLRRRVLIGEVTPERLATMTPEELASD--ERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
DL ++ GE++ + P E+ + E+ E+ KA + K +
Sbjct: 83 DLLDKMKTGEMSIKNFVNAKPWEVCPEKWEKAFEDAAKKALRFTDASAMDPKDMPDGMLQ 142
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C SY++MQTRSADEPMT + C C RWK
Sbjct: 143 CGKCKSRKTSYYEMQTRSADEPMTVFAKCHSCGSRWK 179
>gi|155371687|ref|YP_001427221.1| hypothetical protein ATCV1_Z740R [Acanthocystis turfacea Chlorella
virus 1]
gi|155125007|gb|ABT16874.1| hypothetical protein ATCV1_Z740R [Acanthocystis turfacea Chlorella
virus 1]
Length = 221
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK-----CEVPEKKKGTT 272
PD+ ++ G + ++ P E+ E+ +E E AK + C P+
Sbjct: 123 PDILEQMKAGNASIKQFVYAKPYEICP-EKWEEAFEQAAKRTLRFSDASCIDPDSMPN-- 179
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG SY+++QTRSADEPMT + C C RWK
Sbjct: 180 GMLQCRKCGSKKTSYYELQTRSADEPMTVFARCHSCPNRWK 220
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 136 SHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLR 195
S Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 661 SAPSQPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQ 715
Query: 196 PMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 766
>gi|15240482|ref|NP_198083.1| Transcription factor IIS family protein [Arabidopsis thaliana]
gi|332006288|gb|AED93671.1| Transcription factor IIS family protein [Arabidopsis thaliana]
Length = 370
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
+V LF AAKKAAD A A +PE RC +AL L +T + L L
Sbjct: 264 MVKLFEAAKKAADVANAKGVLSGKPEASRCINALSLLMKINITPKPKEPRSMMDKLEGLT 323
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH K+ + AS LLH+W+Q+I
Sbjct: 324 KHKDRKICHVASALLHLWRQRI 345
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 15 AADAAAATNRSEPEVQRCADALKHLQAFPVTY-DLLVSTQVGKSLRHLKKHPCEKVQNAA 73
AA A R+ EV+RC D L HL++ ++ D+ +S + K L L+ H +++ A
Sbjct: 26 AAIKATYNTRNPCEVERCIDVLNHLKSLSLSVKDIELSESIVK-LETLRSHRNPRIRKEA 84
Query: 74 SELLHIW 80
L H W
Sbjct: 85 QALFHSW 91
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E +F+ + K K+RS++FN+ D +NPDL +V+ G+VTP L M +
Sbjct: 550 IAAGIEAALFDLTQGTSCRYKIKYRSLLFNLRDPRNPDLFLKVVHGDVTPHDLVRMNSVQ 609
Query: 242 LASDE--RRQENEE 253
LA E R ++ EE
Sbjct: 610 LAPQELARWRDQEE 623
>gi|195329544|ref|XP_002031470.1| GM24029 [Drosophila sechellia]
gi|194120413|gb|EDW42456.1| GM24029 [Drosophila sechellia]
Length = 2010
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 143 DSMRDKIRKDL-EKALSRV----ASEAADDEEITDRVKARDPKQVAASVERVMFEKL-RP 196
+ +R IR+ L E+ L+R+ A++ + T + Q +VE MF R
Sbjct: 1270 EPVRIGIRRSLREQLLARIKEARAAQVNSGQPPTQWPNVLEVDQFVKNVELEMFNSFGRD 1329
Query: 197 MGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
+G K K+RS+MFN+ D KN L ++ +V P +L MTPE+LAS E R +EN
Sbjct: 1330 VGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEEN 1388
>gi|449017739|dbj|BAM81141.1| RNA polymerase III subunit [Cyanidioschyzon merolae strain 10D]
Length = 288
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
T Q +C C S++Q+QTRSADEPMTT+ C EC +W+
Sbjct: 246 TSQVRCERCSARKASFYQLQTRSADEPMTTFYRCLECGAQWR 287
>gi|76096375|ref|NP_780760.2| death-inducer obliterator 1 isoform 3 [Mus musculus]
gi|152031593|sp|Q8C9B9.4|DIDO1_MOUSE RecName: Full=Death-inducer obliterator 1; Short=DIO-1; AltName:
Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2256
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 662 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 716
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 717 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|448929538|gb|AGE53105.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus Fr5L]
Length = 180
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK---- 255
A +K S+ +N+ + PDL ++ G+ + P E+ SD+ + E
Sbjct: 66 AYTQKILSVRYNL--KLRPDLMDKMKTGDCSIRWFVNAKPWEICSDKWTEAFEAAARRAL 123
Query: 256 ----AKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKR 311
A M ++P+ C C SY++MQTRSADEPMT + C C R
Sbjct: 124 RFSDASSMDPADMPDG------MLSCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSR 177
Query: 312 WK 313
WK
Sbjct: 178 WK 179
>gi|448932545|gb|AGE56104.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus MO0605SPH]
gi|448933221|gb|AGE56778.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus NE-JV-2]
gi|448936678|gb|AGE60225.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus WI0606]
Length = 221
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFK-----CEVPEKKKGTT 272
PD+ ++ G + ++ P E+ E+ +E E AK + C P+
Sbjct: 123 PDILEQMKAGNASIKQFVYAKPYEICP-EKWEEAFEQAAKRTLRFSDASCIDPDSMPD-- 179
Query: 273 DQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG SY+++QTRSADEPMT + C C RWK
Sbjct: 180 GMLQCRKCGSKKTSYYELQTRSADEPMTVFARCHSCPNRWK 220
>gi|448930913|gb|AGE54476.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus KS1B]
Length = 180
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 219 DLRRRVLIGEVTPERLATMTPEELASD--ERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
DL ++ GE + + P E+ + E+ E+ KA + K +
Sbjct: 83 DLLDKMKTGETSIKNFVNAKPWEVCPEKWEKAFEDAAKKALRFTDASAMDPKDMPDGMLQ 142
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C SY++MQTRSADEPMT + C C RWK
Sbjct: 143 CGKCKSRKTSYYEMQTRSADEPMTVFAKCHSCGSRWK 179
>gi|448928188|gb|AGE51759.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVM-1]
Length = 181
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM-FKCEVPEKKKGTTD-QF 275
PDL ++ G+ + P E+ SD+ E + + F D
Sbjct: 83 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARRALRFSDASSMDPADMADGML 142
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C C SY++MQTRSADEPMT + C C RWK
Sbjct: 143 QCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSRWK 180
>gi|441637983|ref|XP_004090096.1| PREDICTED: death-inducer obliterator 1 [Nomascus leucogenys]
Length = 1185
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + VA +E+ MF +
Sbjct: 661 QPNSQIRQNIRRSLKEILWKRVNDS-DDLLMTENEVGK----VALHIEKEMFNLFQVTDN 715
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 716 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 762
>gi|195055893|ref|XP_001994847.1| GH13879 [Drosophila grimshawi]
gi|193892610|gb|EDV91476.1| GH13879 [Drosophila grimshawi]
Length = 2061
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 145 MRDKIRKDL-EKALSRVASEAADDEEITDRVKARDPKQVAASVERV---MFEKL-RPMGV 199
+R IR+ L E+ L+R+ EA D + D+ + +V V+RV M+ R +G
Sbjct: 1295 IRLNIRRTLKEQLLARI-KEAQDADLAADQSQWLTASEVENFVKRVESEMYHSFGRDVGA 1353
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
K K+RS++FN+ D KN L ++ +V P++L MTP ELAS E R +EN
Sbjct: 1354 KYKSKYRSLIFNIRDRKNKTLFEKICAKQVEPKQLVRMTPSELASQELAKWREEEN 1409
>gi|159124350|gb|EDP49468.1| PHD finger domain protein, putative [Aspergillus fumigatus A1163]
Length = 885
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 27/202 (13%)
Query: 66 CEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKE 125
C K+ AA H+++Q K+ S +++K + DSNA S S+ E
Sbjct: 215 CLKIGTAA----HVYQQG-PKPKQIKMTSPADSVTPLNDKPAQAKEDSNAPPSRQSSVSE 269
Query: 126 KKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVK---ARDPKQV 182
K T D + + R+ AL ++ + D + K R K++
Sbjct: 270 KTTT-------QESGTLDEISNPARRSAASALVKLFVDQISDAQKQGSFKLPEGRSAKEI 322
Query: 183 AA----SVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPER 233
A S+E+ M++ + G E K + R+I+FN+ +KNP LR R+L+G + P+
Sbjct: 323 AQQLGFSIEKAMYQNIC-GGSGEPTEPYKLQLRTILFNV--KKNPSLRDRLLVGSLLPDA 379
Query: 234 LATMTPEELASDERRQENEEIK 255
L+ M+ +++AS+E Q++ EI+
Sbjct: 380 LSKMSSQDMASEELLQKDAEIR 401
>gi|392339728|ref|XP_003753889.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
gi|392346978|ref|XP_003749689.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
Length = 2258
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 664 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 718
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 719 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 765
>gi|148675399|gb|EDL07346.1| death inducer-obliterator 1, isoform CRA_a [Mus musculus]
Length = 2056
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 505 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 559
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 560 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 606
>gi|348554091|ref|XP_003462859.1| PREDICTED: death-inducer obliterator 1 [Cavia porcellus]
Length = 2259
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 662 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 716
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 717 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|383415435|gb|AFH30931.1| death-inducer obliterator 1 isoform b [Macaca mulatta]
Length = 1186
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 662 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 716
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 717 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 763
>gi|351714883|gb|EHB17802.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 2261
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 670 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 724
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 725 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 771
>gi|448926845|gb|AGE50420.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVA-1]
gi|448928528|gb|AGE52098.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVR-1]
Length = 180
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 218 PDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM-FKCEVPEKKKGTTD-QF 275
PDL ++ G+ + P E+ SD+ E + + F D
Sbjct: 82 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARRALRFSDASSMDPADMADGML 141
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C SY++MQTRSADEPMT + C C RWK
Sbjct: 142 SCGKCKSRKTSYYEMQTRSADEPMTVFAKCHTCGSRWK 179
>gi|58257648|dbj|BAA20791.2| KIAA0333 [Homo sapiens]
Length = 1223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 699 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 753
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 754 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 800
>gi|149034011|gb|EDL88794.1| death associated transcription factor 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 2099
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 505 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 559
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 560 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 606
>gi|9631693|ref|NP_048472.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|1131468|gb|AAC96492.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 180
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 219 DLRRRVLIGEVTPERLATMTPEELASD--ERRQENEEIKAKFMFKCEVPEKKKGTTDQFK 276
DL ++ GE + + P E+ + E+ E+ KA + K +
Sbjct: 83 DLLDKMKTGETSIKNFVNSKPWEVCPEKWEKAFEDAAKKALRFTDASAMDPKDMPDGMLQ 142
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C SY++MQTRSADEPMT + C C RWK
Sbjct: 143 CGKCKSRKTSYYEMQTRSADEPMTVFAKCHSCGSRWK 179
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 149 IRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSI 208
IR +++K++ + S+ +++ E R+ ++ +E + + V K ++RSI
Sbjct: 772 IRHNVKKSILGILSKRSEESEDL-RMHPSSITRLVDKIEDSLHKLFGETNVKYKNRYRSI 830
Query: 209 MFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELAS 244
MFN+ DE+N L R+V+IG+VT L MT E++AS
Sbjct: 831 MFNLKDERNHGLWRKVIIGDVTTSELVQMTAEQMAS 866
>gi|186504949|ref|NP_180888.2| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|91805477|gb|ABE65467.1| hypothetical protein At2g33300 [Arabidopsis thaliana]
gi|330253717|gb|AEC08811.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 276
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 2 EKKLVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLR 59
+K L+ LF AKK+AD A A SE E C D L L FP++ + + ++ L
Sbjct: 179 DKDLLELFEIAKKSADFANAKGILASEVETSMCVDTLALLLEFPISARAMETRKLMVRLE 238
Query: 60 HLKKHPCEKVQNAASELLHIWKQKI 84
+L KH K+ N+ S+LL W+Q I
Sbjct: 239 NLTKHKNRKICNSVSKLLQCWRQSI 263
>gi|410227676|gb|JAA11057.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410263506|gb|JAA19719.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410304004|gb|JAA30602.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354255|gb|JAA43731.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 1189
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 665 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 719
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 720 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|213404362|ref|XP_002172953.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
gi|212001000|gb|EEB06660.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
Length = 698
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 145 MRDKIRKDLEKA-LSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLR-------- 195
+ +K+R+ + KA LS + S + + +K D + A +ER MF +L
Sbjct: 169 IPNKVRQSVAKAWLSALKSMVEKCKTESANLKFPDLVEFALQLERTMFIELSYKIDGNAI 228
Query: 196 PMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
P A + K R+I FN++D++NP LR + GE+TP +L MT EE+A+ + + E+I+
Sbjct: 229 P-NKAYRDKFRNIKFNLTDDRNPHLRASLFKGEITPVQLVHMTSEEMANPDLKVFAEQIR 287
>gi|2459413|gb|AAB80648.1| hypothetical protein [Arabidopsis thaliana]
Length = 265
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 2 EKKLVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLR 59
+K L+ LF AKK+AD A A SE E C D L L FP++ + + ++ L
Sbjct: 168 DKDLLELFEIAKKSADFANAKGILASEVETSMCVDTLALLLEFPISARAMETRKLMVRLE 227
Query: 60 HLKKHPCEKVQNAASELLHIWKQKI 84
+L KH K+ N+ S+LL W+Q I
Sbjct: 228 NLTKHKNRKICNSVSKLLQCWRQSI 252
>gi|119595732|gb|EAW75326.1| death inducer-obliterator 1, isoform CRA_e [Homo sapiens]
Length = 1225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 701 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 755
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 756 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 802
>gi|380804173|gb|AFE73962.1| death-inducer obliterator 1 isoform b, partial [Macaca mulatta]
Length = 243
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 37 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 91
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 92 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 138
>gi|116830493|gb|ABK28204.1| unknown [Arabidopsis thaliana]
Length = 249
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 8 LFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP 65
LF AKK+AD A A SE E C D L L FP++ + + ++ L HL KH
Sbjct: 157 LFEIAKKSADFANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKLMVRLEHLTKHK 216
Query: 66 CEKVQNAASELLHIWKQKI 84
K+ N+AS+LL W++ I
Sbjct: 217 NRKICNSASKLLQCWRESI 235
>gi|44971658|gb|AAS49898.1| death inducer-obliterator-2 [Homo sapiens]
Length = 1189
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 665 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 719
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 720 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|15225791|ref|NP_180868.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|2924782|gb|AAC04911.1| hypothetical protein [Arabidopsis thaliana]
gi|91805475|gb|ABE65466.1| unknown [Arabidopsis thaliana]
gi|330253690|gb|AEC08784.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 248
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 8 LFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLKKHP 65
LF AKK+AD A A SE E C D L L FP++ + + ++ L HL KH
Sbjct: 157 LFEIAKKSADFANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKLMVRLEHLTKHK 216
Query: 66 CEKVQNAASELLHIWKQKI 84
K+ N+AS+LL W++ I
Sbjct: 217 NRKICNSASKLLQCWRESI 235
>gi|448936006|gb|AGE59555.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus OR0704.3]
Length = 180
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C CG SY+++QTRSADEPMT + C C RWK
Sbjct: 141 LQCRKCGSKKTSYYELQTRSADEPMTVFARCHSCPNRWK 179
>gi|301780734|ref|XP_002925785.1| PREDICTED: death-inducer obliterator 1-like [Ailuropoda
melanoleuca]
Length = 2165
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF+ +
Sbjct: 663 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTESEVGK----IALHIEKEMFQLFQVTDN 717
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 718 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 764
>gi|281352337|gb|EFB27921.1| hypothetical protein PANDA_015330 [Ailuropoda melanoleuca]
Length = 2163
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF+ +
Sbjct: 663 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTESEVGK----IALHIEKEMFQLFQVTDN 717
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 718 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 764
>gi|375281755|gb|AFA44930.1| transcription elongation factor-SII [Common midwife toad ranavirus]
Length = 92
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 24/37 (64%)
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
KC GCG Q QTRSADEPMT + C+EC KRW
Sbjct: 54 KCPGCGSGRVHALQRQTRSADEPMTLFAMCSECGKRW 90
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + S++ DD +T+ + +A +E+ MF +
Sbjct: 662 QPNSQIRQNIRRSLKEILWKRVSDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 716
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 717 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 763
>gi|71044477|ref|NP_542987.2| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|301129172|ref|NP_001180299.1| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|168278571|dbj|BAG11165.1| death-inducer obliterator 1 [synthetic construct]
gi|223459792|gb|AAI37178.1| Death inducer-obliterator 1 [Homo sapiens]
Length = 1189
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 665 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 719
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 720 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|323508155|emb|CBQ68026.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1064
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 102 VDEKFQKQTSDSNAVKSGCSTAKEKKATASIRKPSH-ADQAKDSMRDKIRKDLEKALSRV 160
D Q++ S+S S S + RKPS D + + R + RK L AL ++
Sbjct: 258 ADRPSQRRASESQRRASALSKLASISKKGAARKPSGPTDASTEEARSRARKVLATALEKI 317
Query: 161 ASEAA-------DDEEITDRVKARDPKQVAASVERVMFEK-------LRPMGVAEKRKHR 206
+ A DDE+ + + AA +E +FE +R +G K + R
Sbjct: 318 FAGAVERRPQKTDDEDAETETDEQRAESFAALLEEELFESNADAHGSIRVVGSKYKDRFR 377
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCEV 264
+ +F++ D KN L R+ G++ LA M+ E LA+D RQ E+ + + + + +
Sbjct: 378 TFLFSLKDSKNTTLHSRIASGQLDASELAKMSNEALANDAIRQATEKARLEALHRSTL 435
>gi|395829525|ref|XP_003787906.1| PREDICTED: death-inducer obliterator 1 [Otolemur garnettii]
Length = 2230
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 668 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 722
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 723 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 769
>gi|240277967|gb|EER41474.1| PHD finger domain-containing protein [Ajellomyces capsulatus H143]
Length = 851
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 182 VAASVERVMFEKL-----RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+ ++E M++ L P A K++ R+I+FN+ KN LR +L+G ++P+ LAT
Sbjct: 323 LGVAIEHAMYKHLCGGSGEP-SEAYKQQMRTILFNV--RKNTSLRDSLLVGSISPDTLAT 379
Query: 237 MTPEELASDERRQENEEIK 255
M+ +++AS E RQ+++EIK
Sbjct: 380 MSTQDMASKELRQKDDEIK 398
>gi|225557325|gb|EEH05611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 892
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 182 VAASVERVMFEKL-----RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+ ++E M++ L P A K++ R+I+FN+ KN LR +L+G ++P+ LAT
Sbjct: 323 LGVAIEHAMYKHLCGGSGEP-SEAYKQQMRTILFNV--RKNTSLRDSLLVGSISPDTLAT 379
Query: 237 MTPEELASDERRQENEEIK 255
M+ +++AS E RQ+++EIK
Sbjct: 380 MSTQDMASKELRQKDDEIK 398
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 143 DSMRDKIRKDLEKALSRVASEAAD---DEEITDRVKARDPKQVAASVERVMFEKLR-PMG 198
++ R R L++AL EA D DE I + QVA +E +F + +G
Sbjct: 1706 EATRSISRSSLKEALWSRCKEANDVETDEAIVE--------QVAKEIEESLFSLYKHDVG 1757
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
K K+RS++FN+ D KNP L R ++ ++ P+ L M+ E+LA
Sbjct: 1758 SKYKNKYRSLIFNIKDPKNPGLFREIITKQLLPDELVKMSTEDLA 1802
>gi|195391634|ref|XP_002054465.1| GJ24469 [Drosophila virilis]
gi|194152551|gb|EDW67985.1| GJ24469 [Drosophila virilis]
Length = 2055
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 143 DSMRDKIRKDL-EKALSRV--ASEAADDEEITDRVKARDPKQVAASVERVMFEKL-RPMG 198
+ +R +R+ L E+ LSR+ A A E +D + A + + VE M+ R +
Sbjct: 1303 EPIRFNVRRTLKEQLLSRIKEAQAAELPTEKSDWLTAAEVENFVKRVESEMYHSFGRDVS 1362
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
K K+RS+MFN+ D KN L ++ +V P++L MTP ELAS E R +EN
Sbjct: 1363 AKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELASQELAKWREEEN 1419
>gi|296813901|ref|XP_002847288.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842544|gb|EEQ32206.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 867
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
A K + R+I+FN+ KNP LR +L+G TP+ ++TM+ + +AS E R+++EEIK
Sbjct: 362 AYKTQLRTILFNV--RKNPSLRDSLLVGRTTPDSISTMSTQNMASQELREKDEEIK 415
>gi|325096028|gb|EGC49338.1| PHD finger domain-containing protein [Ajellomyces capsulatus H88]
Length = 896
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 182 VAASVERVMFEKL-----RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+ ++E M++ L P A K++ R+I+FN+ KN LR +L+G ++P+ LAT
Sbjct: 323 LGVAIEHAMYKHLCGGSGEP-SEAYKQQMRTILFNV--RKNTSLRDSLLVGSISPDTLAT 379
Query: 237 MTPEELASDERRQENEEIK 255
M+ +++AS E RQ+++EIK
Sbjct: 380 MSTQDMASKELRQKDDEIK 398
>gi|295658648|ref|XP_002789884.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282845|gb|EEH38411.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 898
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 8/79 (10%)
Query: 182 VAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+ ++E M++ L G E K++ R+I+FN+ KN LR +L+G ++P+ L+T
Sbjct: 324 LGLAIEHAMYKHLS-GGTGEPSEAYKQQMRTILFNV--RKNTSLRDSLLVGSISPDALST 380
Query: 237 MTPEELASDERRQENEEIK 255
M+ ++AS E RQ+++EIK
Sbjct: 381 MSTHDMASKELRQKDDEIK 399
>gi|225682198|gb|EEH20482.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 897
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 89/163 (54%), Gaps = 21/163 (12%)
Query: 108 KQTSDSNAVKSGCSTA---KEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASE- 163
+++S + +KS S+A +E+KA S P+ + ++ R+++ AL ++ E
Sbjct: 244 EESSPTVHLKSSASSAHFAQEQKAGGS---PAEGVGSPSELQSVPRRNVANALVKLFVEQ 300
Query: 164 -AADDEEITDRVKARDPKQ-----VAASVERVMFEKLRPMGVAE-----KRKHRSIMFNM 212
A+ ++ T + K+ + ++E M++ L G E K++ R+I+FN+
Sbjct: 301 AASAQQQGTFTMPPGQTKEAVGESLGLAIEHAMYKHLS-GGTGEPSEAYKQQMRTILFNV 359
Query: 213 SDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
KN LR +L+G ++P+ L+TM+ ++AS E RQ+++EIK
Sbjct: 360 --RKNTSLRDSLLVGSISPDALSTMSTHDMASKELRQKDDEIK 400
>gi|154274572|ref|XP_001538137.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414577|gb|EDN09939.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 892
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
A K++ R+I+FN+ KN LR +L+G ++P+ LATM+ +++AS E RQ+++EIK
Sbjct: 345 AYKQQMRTILFNV--RKNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIK 398
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF
Sbjct: 664 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFHVTDN 718
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 719 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 765
>gi|327302438|ref|XP_003235911.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
gi|326461253|gb|EGD86706.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
Length = 832
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
A K + R+I+FN+ KNP LR +L+G TP+ ++TM+ + +AS E R+++EEIK
Sbjct: 333 AYKNQLRTILFNV--RKNPSLRDSLLVGRTTPDAISTMSTQNMASQELREKDEEIK 386
>gi|326475222|gb|EGD99231.1| PHD finger domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 833
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
A K + R+I+FN+ KNP LR +L+G TP+ ++TM+ + +AS E R+++EEIK
Sbjct: 332 AYKNQLRTILFNV--RKNPSLRDSLLVGRTTPDAISTMSTQNMASQELREKDEEIK 385
>gi|326479708|gb|EGE03718.1| PHD finger domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 833
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
A K + R+I+FN+ KNP LR +L+G TP+ ++TM+ + +AS E R+++EEIK
Sbjct: 332 AYKNQLRTILFNV--RKNPSLRDSLLVGRTTPDAISTMSTQNMASQELREKDEEIK 385
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ +F
Sbjct: 913 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKELFNLFHVTDN 967
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E+ +L M PEEL S E
Sbjct: 968 RYKSKYRSIMFNLKDPKNQGLFHRVLREEIPLSKLVRMKPEELLSKE 1014
>gi|226290806|gb|EEH46271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 872
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 8/79 (10%)
Query: 182 VAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+ ++E M++ L G E K++ R+I+FN+ KN LR +L+G ++P+ L+T
Sbjct: 300 LGLAIEHAMYKHLS-GGTGEPSEAYKQQMRTILFNV--RKNTSLRDSLLVGSISPDALST 356
Query: 237 MTPEELASDERRQENEEIK 255
M+ ++AS E RQ+++EIK
Sbjct: 357 MSTHDMASKELRQKDDEIK 375
>gi|302510146|ref|XP_003017033.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291180603|gb|EFE36388.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 833
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
A K + R+I+FN+ KNP LR +L+G TP+ ++TM+ + +AS E R+++EEIK
Sbjct: 332 AYKNQLRTILFNV--RKNPSLRDSLLVGRTTPDAISTMSTQNMASQELREKDEEIK 385
>gi|302654552|ref|XP_003019080.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291182777|gb|EFE38435.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 833
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
A K + R+I+FN+ KNP LR +L+G TP+ ++TM+ + +AS E R+++EEIK
Sbjct: 332 AYKNQLRTILFNV--RKNPSLRDSLLVGRTTPDAISTMSTQNMASQELREKDEEIK 385
>gi|303311679|ref|XP_003065851.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240105513|gb|EER23706.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 848
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Query: 133 RKPSHADQAKDSMRDKIRKDLEKALSR-------VASEAADDEEITDRVKARDPKQVAAS 185
+ P+ A + + + RK++ AL + VA E R K + + +
Sbjct: 262 KSPTEATASGATTLTQARKNVANALIKLFVEQAGVAQEQGKFSIPEGRTKESVGEYLGFA 321
Query: 186 VERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
+E+ M++ L G E +++ R+I+FN+ KNP LR +L+G +TP+ + M+ +
Sbjct: 322 IEQAMYQNLC-GGSGEPNDPYRQQMRTILFNV--RKNPSLRDSLLVGRITPDAFSKMSTQ 378
Query: 241 ELASDERRQENEEIK 255
++AS+E RQ ++EIK
Sbjct: 379 DMASEELRQRDDEIK 393
>gi|157953358|ref|YP_001498249.1| hypothetical protein AR158_C167L [Paramecium bursaria Chlorella
virus AR158]
gi|156068006|gb|ABU43713.1| hypothetical protein AR158_C167L [Paramecium bursaria Chlorella
virus AR158]
Length = 180
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 212 MSDEKNPDLRRRVL----IGEVTPERLATMTPEELASD--ERRQENEEIKAKFMFKCEVP 265
+S N LRR +L GE + + P E+ + E+ E+ KA
Sbjct: 72 LSVRYNIGLRRDLLDKMKTGETSIKNFVNAKPWEICPEKWEKAFEDAAKKALRFTDASAM 131
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ K +C C SY+++QTRS+DEPMT + C C RWK
Sbjct: 132 DPKDMPDGMLQCGKCKSRKTSYYELQTRSSDEPMTVFAKCHACGARWK 179
>gi|70991879|ref|XP_750788.1| PHD finger domain protein [Aspergillus fumigatus Af293]
gi|66848421|gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 27/202 (13%)
Query: 66 CEKVQNAASELLHIWKQKIVLGKETNGNKRNGSKLSVDEKFQKQTSDSNAVKSGCSTAKE 125
C K+ AA H+++Q K+ S +++K + DSNA S S+ +
Sbjct: 215 CLKIGTAA----HVYQQG-PKPKQIKMTSPADSVTPLNDKPAQAKEDSNAPPSRQSSVSQ 269
Query: 126 KKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVK---ARDPKQV 182
K T D + + R+ AL ++ + D + K R K++
Sbjct: 270 KTTT-------QESGTLDEISNPARRSAASALVKLFVDQISDAQKQGSFKLPEGRSAKEI 322
Query: 183 AA----SVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPER 233
A S+E+ M++ + G E K + R+I+FN+ +KNP LR R+L+G + P+
Sbjct: 323 AQQLGFSIEKAMYQNIC-GGSGEPTEPYKLQLRTILFNV--KKNPSLRDRLLVGSLLPDA 379
Query: 234 LATMTPEELASDERRQENEEIK 255
L+ M+ +++AS+E Q++ EI+
Sbjct: 380 LSKMSSQDMASEELLQKDAEIR 401
>gi|452821015|gb|EME28050.1| hypothetical protein Gasu_43890 [Galdieria sulphuraria]
Length = 707
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 124 KEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVA 183
K K S RK S ++ + + IR+ + L+++ E +D + + + ++A
Sbjct: 163 KTTKVGTSPRKDSFM---QERVAENIREKAKNVLNQILLENLEDTGVD--IDKTNISKIA 217
Query: 184 ASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELA 243
+E +FEK E+ RS+ FN+ ++N DL+R +++ +++P RLA MT +ELA
Sbjct: 218 IDIENALFEKYFKADYLEQL--RSLTFNLRGKRNLDLKRAIVMSDISPTRLAEMTADELA 275
Query: 244 S 244
S
Sbjct: 276 S 276
>gi|320039752|gb|EFW21686.1| hypothetical protein CPSG_01843 [Coccidioides posadasii str.
Silveira]
Length = 848
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Query: 133 RKPSHADQAKDSMRDKIRKDLEKALSR-------VASEAADDEEITDRVKARDPKQVAAS 185
+ P+ A + + + RK++ AL + VA E R K + + +
Sbjct: 262 KSPTEATASGATTLTQARKNVANALIKLFVEQAGVAQEQGKFSIPEGRTKESVGEYLGFA 321
Query: 186 VERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPE 240
+E+ M++ L G E +++ R+I+FN+ KNP LR +L+G +TP+ + M+ +
Sbjct: 322 IEQAMYQNLC-GGSGEPNDPYRQQMRTILFNV--RKNPSLRDSLLVGRITPDAFSKMSTQ 378
Query: 241 ELASDERRQENEEIK 255
++AS+E RQ ++EIK
Sbjct: 379 DMASEELRQRDDEIK 393
>gi|255072159|ref|XP_002499754.1| predicted protein [Micromonas sp. RCC299]
gi|226515016|gb|ACO61012.1| predicted protein [Micromonas sp. RCC299]
Length = 181
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSI--MFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
+A +VE+ +F +R A+ +RS + +N LRRRVL GE++PE L ++P
Sbjct: 33 LARAVEQALF--VRKGSDAKDPSYRSAARFLAANIRRNGPLRRRVLDGELSPEALCELSP 90
Query: 240 EELASDERRQENEEIKAK-FMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQ------- 291
+ELA+DE +++ E+++ + + + T ++ C C + C+Y ++
Sbjct: 91 DELATDEMKRKREKMEERSYKRRTRTTTDTLTDTTKYHCKDCDSNECAYADLKGHRDIRK 150
Query: 292 ------TRSADEPMTTYVTCAECNKRW 312
SAD+ V C +C W
Sbjct: 151 NETWGSNESADDARVM-VVCKQCGAEW 176
>gi|18656509|gb|AAL77810.1|AF389451_17 putative transcription elongation factor SII [Tiger frog virus]
Length = 92
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 24/37 (64%)
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
KC GCG Q QTRSADEPMT + C+EC KRW
Sbjct: 54 KCPGCGSRRVHALQRQTRSADEPMTLFAMCSECGKRW 90
>gi|357618039|gb|EHJ71135.1| hypothetical protein KGM_08149 [Danaus plexippus]
Length = 1879
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 18/115 (15%)
Query: 144 SMRDKIRKDLEKALS-RVASEAAD-------DEEITDRVKARDPKQVAASVERVMFEKL- 194
S D IR+++ KAL ++AS A+ +EEI +Q A E + E
Sbjct: 992 SSEDPIRENVRKALQEQIASRMAEYDGPKFTEEEI---------QQFAYDTELELHELFN 1042
Query: 195 RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ 249
R +G+ K K+RS+MFN+ D KN L ++ +TP++L +PEELAS E Q
Sbjct: 1043 RDVGMKYKAKYRSLMFNIKDRKNLSLWEKICEKVITPKQLVRFSPEELASQELAQ 1097
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + VA +E+ MF +
Sbjct: 661 QPNSQIRQNIRRSLKEILWKRVNDS-DDLLMTENEVGK----VALHIEKEMFNLFQVTDN 715
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 716 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 762
>gi|49237379|ref|YP_031660.1| transcription elongation factor SII [Frog virus 3]
gi|81941481|sp|Q6GZP4.1|081R_FRG3G RecName: Full=Putative transcription elongation factor S-II-like
protein 81R
gi|47060197|gb|AAT09741.1| transcription elongation factor SII [Frog virus 3]
Length = 92
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 24/37 (64%)
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
KC GCG Q QTRSADEPMT + C+EC KRW
Sbjct: 54 KCPGCGSRRVHALQRQTRSADEPMTLFAMCSECGKRW 90
>gi|194307576|gb|ACF42306.1| transcription elongation factor [Soft-shelled turtle iridovirus]
gi|383215255|gb|AFG73130.1| transcription elongation factor sii [Rana grylio iridovirus]
Length = 92
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 24/37 (64%)
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
KC GCG Q QTRSADEPMT + C+EC KRW
Sbjct: 54 KCPGCGSRRVHALQRQTRSADEPMTLFAMCSECGKRW 90
>gi|358369364|dbj|GAA85979.1| PHD finger domain protein [Aspergillus kawachii IFO 4308]
Length = 927
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 206 RSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
R+IMFN+ +KNP LR R+L+G ++P+ L+ M+ +++AS+E +Q++ EIK
Sbjct: 397 RTIMFNV--KKNPSLRDRLLVGSLSPDALSKMSTQDMASEELQQKDAEIK 444
>gi|45686032|ref|YP_003795.1| transcription elongation factor-SII [Ambystoma tigrinum virus]
gi|388260096|ref|YP_006347624.1| transcription elongation factor-SII [European catfish virus]
gi|37722456|gb|AAP33201.1| transcription elongation factor-SII [Ambystoma tigrinum stebbensi
virus]
gi|387119455|gb|AFJ52316.1| transcription elongation factor-SII [European catfish virus]
Length = 92
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 24/37 (64%)
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
KC GCG Q QTRSADEPMT + C+EC KRW
Sbjct: 54 KCPGCGSRRVHALQRQTRSADEPMTLFAMCSECGKRW 90
>gi|119193931|ref|XP_001247569.1| hypothetical protein CIMG_01340 [Coccidioides immitis RS]
gi|392863190|gb|EAS36089.2| PHD finger domain-containing protein [Coccidioides immitis RS]
Length = 849
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 182 VAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLAT 236
+ ++E+ M++ L G E +++ R+I+FN+ KNP LR +L+G +TP+ +
Sbjct: 319 LGFAIEQAMYQNLC-GGSGEPNDPYRQQMRTILFNV--RKNPSLRDSLLVGRITPDAFSK 375
Query: 237 MTPEELASDERRQENEEIK 255
M+ +++AS+E RQ ++EIK
Sbjct: 376 MSTQDMASEELRQRDDEIK 394
>gi|50556790|ref|XP_505803.1| YALI0F23815p [Yarrowia lipolytica]
gi|74632309|sp|Q6C0K9.1|BYE1_YARLI RecName: Full=Transcription factor BYE1
gi|49651673|emb|CAG78614.1| YALI0F23815p [Yarrowia lipolytica CLIB122]
Length = 822
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 182 VAASVERVMFE---KLRP-MGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATM 237
+A ++E+ +++ + P +G + K R++ FN+ D KN LR RV+ G+VTP+ L M
Sbjct: 237 LALTIEQELYDAYGTVEPEIGSNYRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLVAM 296
Query: 238 TPEELASDERRQENEEIKAKFM 259
+ EE+ + E ++ EE++A+ +
Sbjct: 297 SSEEMMNPELQKLAEEVRAEAI 318
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 701 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 755
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 756 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 802
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E +F + K K+RS++FN+ D +NP+L +V+ G++TP L M+ +
Sbjct: 659 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 718
Query: 242 LASDE--RRQENEE 253
LA E R ++ EE
Sbjct: 719 LAPQELARWRDQEE 732
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 665 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 719
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 720 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 674 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 728
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 729 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 775
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 665 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 719
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 720 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|168050394|ref|XP_001777644.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670987|gb|EDQ57546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1465
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 180 KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTP 239
+++A +E +F KL +K RS++FN+ D+ NP+LR RV GE+ PE L M+
Sbjct: 358 RKLATDIEAELF-KLYGSKKMYNQKARSLLFNLKDKSNPELRARVFSGEIPPEDLCRMSG 416
Query: 240 EELASDE 246
E+LAS E
Sbjct: 417 EQLASKE 423
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 662 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 716
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 717 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 763
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 664 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 718
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 719 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 765
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 662 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 716
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 717 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 763
>gi|258575137|ref|XP_002541750.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902016|gb|EEP76417.1| predicted protein [Uncinocarpus reesii 1704]
Length = 888
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
A K++ R+I+FN+ KNP LR +L+G ++P+ + M+ +++AS+E RQ ++EIK
Sbjct: 378 AYKQQMRTILFNV--RKNPSLRDSLLVGRISPDAFSKMSTQDMASEELRQRDDEIK 431
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1;
Short=hDido1; AltName: Full=Death-associated
transcription factor 1; Short=DATF-1
Length = 2240
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 665 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 719
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 720 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ MF +
Sbjct: 665 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKEMFNLFQVTDN 719
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L + PEEL S E
Sbjct: 720 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|448825537|ref|YP_007418468.1| transcription factor S-II-related protein [Megavirus lba]
gi|371943903|gb|AEX61731.1| transcription factor S-II-related protein [Megavirus courdo7]
gi|425701469|gb|AFX92631.1| transcription factor S-II-related protein [Megavirus courdo11]
gi|444236722|gb|AGD92492.1| transcription factor S-II-related protein [Megavirus lba]
Length = 170
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 13/113 (11%)
Query: 206 RSIMFNMSDEKNP--DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
R+I++N+ ++ + +++++ GE +A + P+EL D K + + +
Sbjct: 63 RNILYNLKEDCDTIKQIKQQISKGEYNAYNIAFLKPDELNKDNW--------IKIIMRKK 114
Query: 264 VPEKKKGTTDQFK---CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E+K + C C + Y Q+QTRSADEP+TT+ C +C+K +K
Sbjct: 115 TTEEKLNDLPAIEWKACRACKNTEYFYRQLQTRSADEPITTFYICKKCSKTYK 167
>gi|194742650|ref|XP_001953814.1| GF17954 [Drosophila ananassae]
gi|190626851|gb|EDV42375.1| GF17954 [Drosophila ananassae]
Length = 1976
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 130 ASIRKPSHADQAKDSMRDKIRKDL-EKALSRVASEAADDEE------ITDRVKARDPKQV 182
AS+ S + + +R IR+ L E+ L+R+ EA D+E+ T + A +
Sbjct: 1238 ASVPSTSRSATKPEPVRIGIRRSLKEQLLARI-KEAQDEEKASSQDATTQWLTAAEVDHF 1296
Query: 183 AASVERVMFEKL-RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+VE M+ R +G K K+RS+MFN+ D KN L ++ +V P++L MT E+
Sbjct: 1297 VKAVESEMYHSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTAEQ 1356
Query: 242 LASDE----RRQEN 251
LAS E R +EN
Sbjct: 1357 LASQELAKWREEEN 1370
>gi|115400495|ref|XP_001215836.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191502|gb|EAU33202.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 885
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKLRPMGVAE-----KRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+Q+A ++E M++ + G E K + R+I+FN+ +KN LR R+L+G ++P+ L
Sbjct: 336 QQIALAIEYAMYQNIC-GGAGEPTEAYKLQLRTILFNV--KKNTSLRDRLLVGSLSPDSL 392
Query: 235 ATMTPEELASDERRQENEEIK 255
+ M+ +++AS+E +Q++ EIK
Sbjct: 393 SKMSSQDMASEELQQKDAEIK 413
>gi|298713146|emb|CBJ26902.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 437
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFM 259
A K K R + FN+ KN LR R+L G + P L M+ +LA R+E E K +
Sbjct: 321 AYKAKAREMSFNLRVGKNDPLRERLLSGSLLPSDLVRMSSNDLAPLSVRRERERFARKRI 380
Query: 260 FKCEVPEKKKG----TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
EV + TD+F C CG Y + ++ + + V C +C W+
Sbjct: 381 R--EVTSSRDSPFHTVTDRFACVECGHEKTQYRTWRRKAVVDRVRVIVQCLQCRHSWE 436
>gi|40287878|gb|AAR84049.1| death inducer-obliterator-2 [Mus musculus]
Length = 1183
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 148 KIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRS 207
+IR+++ ++L + + +D + + + ++A +E+ MF + K K+RS
Sbjct: 666 QIRQNIRRSLKEILWKRVNDSDYLIMTE-NEVGKIALHIEKEMFNLFQVTDNRFKSKYRS 724
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
IMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 145 MRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRK 204
MR IR+ L L + S++ DD ++T+ R +A ++E+ MF K K
Sbjct: 657 MRQNIRRSLTDILFKRVSDS-DDLKMTENEVGR----LAFAIEKEMFNLCLSTDSKYKNK 711
Query: 205 HRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQENEEIKA 256
+R++M ++ D KN L +V+ G+VTP RL + EEL S E RR++ E +A
Sbjct: 712 YRTLMLHLKDPKNKGLFYKVMGGDVTPFRLVRLGAEELVSREMSEWRRRDAPESQA 767
>gi|297823073|ref|XP_002879419.1| hypothetical protein ARALYDRAFT_902347 [Arabidopsis lyrata subsp.
lyrata]
gi|297325258|gb|EFH55678.1| hypothetical protein ARALYDRAFT_902347 [Arabidopsis lyrata subsp.
lyrata]
Length = 336
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
++ LF AKK+AD A A ++ E C D L L FP+ + Q+ L L
Sbjct: 250 MLELFDMAKKSADVANAKGILAAKEEASICVDTLSLLMEFPIISTATETRQIMVKLERLT 309
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH K+ N+A LLH W+Q I
Sbjct: 310 KHKDRKICNSALALLHHWRQNI 331
>gi|448934703|gb|AGE58255.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NY-2B]
gi|448935075|gb|AGE58626.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NYs1]
Length = 180
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 212 MSDEKNPDLRRRVL----IGEVTPERLATMTPEELASD--ERRQENEEIKAKFMFKCEVP 265
+S N LRR +L GE + + P E+ + E+ E+ KA
Sbjct: 72 LSVRYNIGLRRDLLDKMKTGETSIKNFVNAKPWEICPEKWEKAFEDAAKKALRFTDASAM 131
Query: 266 EKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ K +C C SY+++QTRS+DEPM+ + C C RWK
Sbjct: 132 DPKDMPDGMLQCGKCKSRKTSYYELQTRSSDEPMSVFAKCHACGARWK 179
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 140 QAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGV 199
Q +R IR+ L++ L + +++ DD +T+ + +A +E+ +F +
Sbjct: 664 QPNSQIRQNIRRSLKEILWKRVNDS-DDLIMTENEVGK----IALHIEKELFNLFQVTDN 718
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K K+RSIMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 719 RYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 765
>gi|449690494|ref|XP_002161127.2| PREDICTED: uncharacterized protein LOC100205379, partial [Hydra
magnipapillata]
Length = 1145
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 133 RKPSHADQAKDSMRDKIRKDLEKALSRV-ASEAADDEEITDRVKARDPKQVAASVERVMF 191
++P K + +R + + L +V S DE + +V++ ++ +E +
Sbjct: 1 KQPDSLKNVKKDQDELVRSSVRRVLRQVLVSRCKQDELLVIQVES--IGKLCKKIESELL 58
Query: 192 EKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQEN 251
+ K K RS++FN+ D +N L +RV+ GE+TP L MTPE+LA+ Q
Sbjct: 59 KLFVETNNKYKAKSRSLIFNLRDNQNKILYKRVVSGEITPYELVRMTPEQLATPALAQWR 118
Query: 252 EE 253
E+
Sbjct: 119 EQ 120
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA VE +F+ + K K+RS++FN+ D +NPDL +VL G+VTP L E
Sbjct: 133 IAAGVEAALFDLTQGTQGRYKAKYRSLLFNLRDPRNPDLFLKVLHGDVTPHDLGL----E 188
Query: 242 LASDERRQENEEIKAKFMFKCEV 264
+ ++R+ +K K EV
Sbjct: 189 VIKQQQREPRGLPVSKLTHKGEV 211
>gi|363540774|ref|YP_004894614.1| mg563 gene product [Megavirus chiliensis]
gi|350611939|gb|AEQ33383.1| transcription factor S-II-related protein [Megavirus chiliensis]
Length = 170
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 206 RSIMFNMSDEKNP--DLRRRVLIGEVTPERLATMTPEELASDERRQENEEIKAKFMFKCE 263
R+I++N ++ + +++++ GE +A + P+EL D K + + +
Sbjct: 63 RNILYNFKEDCDTIKQIKQQISKGEYNAYNIAFLKPDELNKDNW--------IKIIMRKK 114
Query: 264 VPEKKKGTTDQFK---CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
E+K + C C + Y Q+QTRSADEP+TT+ C +C+K +K
Sbjct: 115 TTEEKLNDLPAIEWKACRACKNTEYFYRQLQTRSADEPITTFYICKKCSKTYK 167
>gi|448934363|gb|AGE57916.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NW665.2]
Length = 181
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C C SY++MQTRSADEPMT + C C RWK
Sbjct: 142 LQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHTCGSRWK 180
>gi|66362552|ref|XP_628242.1| RNA polymerase III subunit C11 [Cryptosporidium parvum Iowa II]
gi|46229854|gb|EAK90672.1| RNA polymerase III subunit C11 [Cryptosporidium parvum Iowa II]
Length = 62
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C S + Q+Q RSADEPMT++ TC +C+ +WK
Sbjct: 24 CPKCSFSEAYFFQLQIRSADEPMTSFYTCVKCDFKWK 60
>gi|116283511|gb|AAH29069.1| SPOCD1 protein [Homo sapiens]
Length = 266
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E +++ + K K+RS++FN+ D +N DL +V+ G+VTP L M+ +
Sbjct: 22 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 81
Query: 242 LASDE--RRQENEEIKAKFMF 260
LA E R ++ EE + MF
Sbjct: 82 LAPQELARWRDQEEKRGPQMF 102
>gi|291224586|ref|XP_002732285.1| PREDICTED: PHD finger protein 3-like [Saccoglossus kowalevskii]
Length = 1741
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 173 RVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
++++ + ++V +E +F+ + K K+R++MFN+ D N L RRVL G+++P
Sbjct: 812 KLRSEEIEKVVNRIEHELFKLYQDTSSKYKAKYRTLMFNLKDVNNKGLFRRVLKGDISPS 871
Query: 233 RLATMTPEELA 243
+L MT E++A
Sbjct: 872 KLVGMTSEQMA 882
>gi|448926167|gb|AGE49744.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus Can18-4]
Length = 180
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C C SY++MQTRSADEPMT + C C RWK
Sbjct: 141 LQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSRWK 179
>gi|345487112|ref|XP_003425624.1| PREDICTED: hypothetical protein LOC100679883 isoform 1 [Nasonia
vitripennis]
Length = 2181
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 145 MRDKIRKDLEKALSRVASEAAD----DEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
+R +RK L + L+ EA D +EEI+ ++A +E MF+ + G
Sbjct: 1298 IRLTVRKTLAELLTSRVKEANDLAITEEEIS---------ELALQIELEMFKFFKDTGQK 1348
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
K K+RS++FN+ D KN L R++ ++P + ++P+E+AS E R +EN
Sbjct: 1349 YKSKYRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKEN 1403
>gi|155121849|gb|ABT13717.1| hypothetical protein MT325_M163L [Paramecium bursaria chlorella
virus MT325]
Length = 180
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 275 FKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+C C SY++MQTRSADEPMT + C C RWK
Sbjct: 141 LQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSRWK 179
>gi|242764560|ref|XP_002340799.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218723995|gb|EED23412.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 875
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 8/81 (9%)
Query: 180 KQVAASVERVMFEKL-----RPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERL 234
+ + SVE M+ L P A K + RSIMFN+ + N LR R+L G + P L
Sbjct: 316 RPLGLSVEHAMYVNLCGGSGEPND-AYKNQLRSIMFNV--KANSSLRDRLLSGSLAPSTL 372
Query: 235 ATMTPEELASDERRQENEEIK 255
ATM+ +++AS+E++Q++ EIK
Sbjct: 373 ATMSSQDMASEEQQQKDAEIK 393
>gi|345487114|ref|XP_003425625.1| PREDICTED: hypothetical protein LOC100679883 isoform 2 [Nasonia
vitripennis]
Length = 2039
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 145 MRDKIRKDLEKALSRVASEAAD----DEEITDRVKARDPKQVAASVERVMFEKLRPMGVA 200
+R +RK L + L+ EA D +EEI+ ++A +E MF+ + G
Sbjct: 1305 IRLTVRKTLAELLTSRVKEANDLAITEEEIS---------ELALQIELEMFKFFKDTGQK 1355
Query: 201 EKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
K K+RS++FN+ D KN L R++ ++P + ++P+E+AS E R +EN
Sbjct: 1356 YKSKYRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKEN 1410
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E +F+ + K+RS++FN+ D +NPDL +V+ G+VTP+ L M +
Sbjct: 625 LAAGIEAALFDLTHATNGHYRTKYRSLLFNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQ 684
Query: 242 LASDE--RRQENEE 253
LA E R ++ EE
Sbjct: 685 LAPQELARWRDQEE 698
>gi|294880257|ref|XP_002768947.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
gi|239871976|gb|EER01665.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE-----RRQENEEI 254
A + +R + FN+SD +N LRRRVL GE++P+ L T + +EL SD RQ+ +
Sbjct: 369 AYRAAYRMVNFNLSDPQNASLRRRVLTGEMSPQHLVTASHDELGSDSLKKRRLRQQEKYY 428
Query: 255 KAKFMFK 261
K++ + +
Sbjct: 429 KSQVLLE 435
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
VAAS+E +F+ + K K+RS++FN+ D +N DL +V+ G+V+P L M+ +
Sbjct: 709 VAASIEAALFDLTQGTNCRYKTKYRSLLFNLRDPRNMDLFLKVVHGDVSPHDLVRMSSIQ 768
Query: 242 LASDE--RRQENEE 253
LA E R ++ EE
Sbjct: 769 LAPQELARWRDQEE 782
>gi|15226245|ref|NP_180346.1| transcription factor IIS-like protein [Arabidopsis thaliana]
gi|3860254|gb|AAC73022.1| hypothetical protein [Arabidopsis thaliana]
gi|330252949|gb|AEC08043.1| transcription factor IIS-like protein [Arabidopsis thaliana]
Length = 368
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
+V LF AAKKAAD A A + E RC DAL L +T ++ L L
Sbjct: 262 MVKLFEAAKKAADVANAKGVLSGKAEASRCIDALSVLMKINITPKPKEPRRMMDKLEGLT 321
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH + + AS LLH+W+Q+I
Sbjct: 322 KHKDRMICHVASALLHLWRQRI 343
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 15 AADAAAATNRSEPEVQRCADALKHLQAFPVTY-DLLVSTQVGKSLRHLKKHPCEKVQNAA 73
AA A R+ EV+RC D L HL++ ++ D+ +S + K L L+ H +++ AA
Sbjct: 24 AAIKATYNTRNPCEVERCIDVLNHLKSLSLSVKDIRLSESIVK-LETLRSHRNPRIRKAA 82
Query: 74 SELLHIW 80
L H W
Sbjct: 83 QALFHSW 89
>gi|432866827|ref|XP_004070955.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1340
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 123 AKEKKATASIR-KPSHADQAKDSMRD-----KIRKDLEKALSRVASEAA---DDEEITDR 173
+++ AT+SI PS D S R +IR+ ++++L+ + + +D E+++
Sbjct: 515 GEQEAATSSITCDPSLTDVHAPSSRPCQPNTQIRQSIQRSLTSILLKRICDCEDLEMSES 574
Query: 174 VKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPER 233
A+ + A +E MF+ R K+R+IMFN+ D KN L RV+ GE+ P R
Sbjct: 575 EVAK----LVACIETEMFDIFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVHGEIGPFR 630
Query: 234 LATMT 238
L M+
Sbjct: 631 LVRMS 635
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 145 MRDKIRKDLEKAL-SRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKR 203
+RD + + +++AL SR+ D ++++V + +AA +E +F + K
Sbjct: 664 VRDTVVRTMQEALWSRLRKHP--DLVLSEKVV----EGIAAGIEAALFNLTQATNSRYKT 717
Query: 204 KHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE--RRQENEE 253
K+RS++FN+ D +NP+L +V+ G++TP L M+ +LA E R ++ EE
Sbjct: 718 KYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQLAPQELARWRDREE 769
>gi|40287880|gb|AAR84050.1| death inducer-obliterator-3 [Mus musculus]
Length = 2256
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 148 KIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRS 207
+IR+++ ++L + + +D + + + ++A +E+ MF + K K+RS
Sbjct: 666 QIRQNIRRSLKEILWKRVNDSDYLIMTE-NEVGKIALHIEKEMFNLFQVTDNRFKSKYRS 724
Query: 208 IMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
IMFN+ D KN L RVL E++ +L M PEEL S E
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|367006795|ref|XP_003688128.1| hypothetical protein TPHA_0M01190 [Tetrapisispora phaffii CBS 4417]
gi|357526435|emb|CCE65694.1| hypothetical protein TPHA_0M01190 [Tetrapisispora phaffii CBS 4417]
Length = 110
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CG + + Q+Q RSADEPMTT+ C C KRWK
Sbjct: 75 CGGESAYFFQLQIRSADEPMTTFYKCVNCGKRWK 108
>gi|195110799|ref|XP_001999967.1| GI24826 [Drosophila mojavensis]
gi|193916561|gb|EDW15428.1| GI24826 [Drosophila mojavensis]
Length = 2080
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 143 DSMRDKIRKDL-EKALSRV--ASEAADDEEITDRVKARDPKQVAASVERVMFEKL-RPMG 198
+ +R +R+ L E+ L R+ A EA E ++ + A + + VE M+ + +
Sbjct: 1320 EPIRLNVRRTLKEQLLLRIKEAQEAEKPAEKSEWLTAAEVEHFVKRVESEMYNSFGQDVS 1379
Query: 199 VAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
K K+RS+MFN+ D KN L ++ +V P++L MTP ELAS E R +EN
Sbjct: 1380 AKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELASQELAKWREEEN 1436
>gi|170057596|ref|XP_001864553.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877015|gb|EDS40398.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 895
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 141 AKDSMRDKIRKDLEKALSRVASEAADDEE----ITDRVKARDPKQVAASVERVMFEKL-R 195
A +++R ++K L++ L + SE +D+ + R+ + A VE MF +
Sbjct: 303 AGENIRVTVKKTLKEHLLQRTSELDEDKSGAQLLAVRLSESEIDAFVAEVEEEMFGMFNK 362
Query: 196 PMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQ--ENE 252
G + K+RS++FN+ D KN L +++ + +L MTPEELAS E Q ENE
Sbjct: 363 DTGTKYRAKYRSLVFNIKDRKNLSLFQKICEKRIEARQLVRMTPEELASQELAQWRENE 421
>gi|21749290|dbj|BAC03567.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 110 TSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
+SD +SG A+E + Q K S+ +R + +++ V E
Sbjct: 62 SSDPACSQSGPMEAEEDSLPEQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRL--RE 119
Query: 170 ITDRVKARDPKQ-VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+ D V + + + +AA +E +++ + K K+RS++FN+ D +N DL +V+ G+
Sbjct: 120 LPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGD 179
Query: 229 VTPERLATMTPEELASDE--RRQENEE 253
VTP L M+ +LA E R ++ EE
Sbjct: 180 VTPYDLVRMSSMQLAPQELARWRDQEE 206
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E +F + K K+RS++FN+ D +NP+L +V+ G++TP L M+ +
Sbjct: 581 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 640
Query: 242 LASDE--RRQENEE 253
LA E R ++ EE
Sbjct: 641 LAPQELARWRDQEE 654
>gi|397515906|ref|XP_003828182.1| PREDICTED: SPOC domain-containing protein 1 isoform 2 [Pan
paniscus]
Length = 1216
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 110 TSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
+SD +SG A+E + Q K S+ +R + +++ V E
Sbjct: 569 SSDPACSQSGPMEAEEDSLPEQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRL--RE 626
Query: 170 ITDRVKARDPKQ-VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+ D V + + + +AA +E +++ + K K+RS++FN+ D +N DL +V+ G+
Sbjct: 627 LPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGD 686
Query: 229 VTPERLATMTPEELASDE--RRQENEE 253
VTP L M+ +LA E R ++ EE
Sbjct: 687 VTPYDLVRMSSMQLAPQELARWRDQEE 713
>gi|323305599|gb|EGA59340.1| Rpc11p [Saccharomyces cerevisiae FostersB]
gi|323309844|gb|EGA63047.1| Rpc11p [Saccharomyces cerevisiae FostersO]
gi|323334176|gb|EGA75559.1| Rpc11p [Saccharomyces cerevisiae AWRI796]
gi|323338304|gb|EGA79533.1| Rpc11p [Saccharomyces cerevisiae Vin13]
gi|323349328|gb|EGA83553.1| Rpc11p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355738|gb|EGA87553.1| Rpc11p [Saccharomyces cerevisiae VL3]
gi|365766551|gb|EHN08047.1| Rpc11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 100
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CG + + Q+Q RSADEPMTT+ C C RWK
Sbjct: 65 CGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWK 98
>gi|145699116|ref|NP_001007578.2| transcription elongation factor A N-terminal and central
domain-containing protein [Mus musculus]
gi|134034939|sp|Q3US16.1|TEANC_MOUSE RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
gi|74187673|dbj|BAE24521.1| unnamed protein product [Mus musculus]
gi|148708776|gb|EDL40723.1| mCG7558 [Mus musculus]
Length = 359
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 171 TDRVKARDPKQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVT 230
TD + + +A +E +F K RS + N+ + +N L++ L G ++
Sbjct: 199 TDHTEVHIWQNLAREIEEHIFTLHSNNIKKYKTSIRSKVANLKNPRNFHLQQNFLSGTMS 258
Query: 231 PERLATMTPEELASDERRQENEEIKAKFMFKCEVPEKKKGT-TDQFKCSGCGKSNCSY-- 287
A M+ ++AS E +Q + + +P+ GT T++ KC C K NC
Sbjct: 259 AREFAEMSVLDMASQELKQLRASYTESSIQEHCLPQSVDGTWTNKIKCRRCDKYNCKVTV 318
Query: 288 ---------HQMQTRSADEPMTTYVTCAECNKRW 312
+Q + DE MT YV C EC ++W
Sbjct: 319 IARGTLFLPSWVQNSNPDEQMT-YVICNECGEQW 351
>gi|7521741|pir||S47662 transcription elongation factor TFIIS homolog - Chlorella virus
CV-U1
Length = 180
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 207 SIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASD--ERRQENEEIKAKFMFKCEV 264
S+ +N+ + DL ++ GE + + P E+ + E+ E+ KA
Sbjct: 73 SVRYNIGLRQ--DLLDKMKTGETSVKNFVNAKPWEVCPEKWEKAFEDAAKKALRFTDASA 130
Query: 265 PEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
+ K +C C SY++MQ R++DEPMT + C C RWK
Sbjct: 131 MDPKDMPDGMLQCGKCKSRKTSYYEMQCRASDEPMTVFAKCHSCGSRWK 179
>gi|307104138|gb|EFN52393.1| hypothetical protein CHLNCDRAFT_138851 [Chlorella variabilis]
Length = 92
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 272 TDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
T+ +CS CG + Y Q+Q RSADEP TTY C C K W+
Sbjct: 49 TEHTRCSECGHNVAFYQQVQNRSADEPATTYFRCTRCAKVWQ 90
>gi|253744950|gb|EET01076.1| Transcription factor TFIIS [Giardia intestinalis ATCC 50581]
Length = 346
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 17/192 (8%)
Query: 137 HADQAKDSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKL-- 194
H + D +R++ + D ++ +V + R+P +A +E +F
Sbjct: 155 HFSEVGDEIREEAQTDNPASMYKVYQSDYSHKSYIYFYLPRNPLFIADLIESSLFNAFSG 214
Query: 195 -----------RPMGVAEKRKHRSIMFNMS--DEKNPDLRRRVLIGEVTPERLATMTPEE 241
+ G+++ + I+ + S N DL V + + P+ L M+ E
Sbjct: 215 GYTKEYEILERKRQGLSQAYADKFILLHSSLVHPGNLDLCASVFMQVIKPQELVQMSVIE 274
Query: 242 LASDERRQENEEIKAKFMFKCEVPEKKKGTTDQFKCSGCGKSNCSYHQMQTRSADEPMTT 301
L E R+ + + + M ++ + T KC C + + QTRSADE T
Sbjct: 275 LEPAECRELRNKAREEIMASVDLKRFVQHTG--IKCKKCKQETVVRLEKQTRSADEATTI 332
Query: 302 YVTCAECNKRWK 313
TC+ C RW+
Sbjct: 333 EYTCSSCGHRWR 344
>gi|332808286|ref|XP_003307989.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Pan troglodytes]
Length = 1204
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 110 TSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
+SD +SG A+E + Q K S+ +R + +++ V E
Sbjct: 570 SSDPACSQSGPMEAEEDSLPEQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRL--RE 627
Query: 170 ITDRVKARDPKQ-VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+ D V + + + +AA +E +++ + K K+RS++FN+ D +N DL +V+ G+
Sbjct: 628 LPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGD 687
Query: 229 VTPERLATMTPEELASDE--RRQENEE 253
VTP L M+ +LA E R ++ EE
Sbjct: 688 VTPYDLVRMSSMQLAPQELARWRDQEE 714
>gi|397515904|ref|XP_003828181.1| PREDICTED: SPOC domain-containing protein 1 isoform 1 [Pan
paniscus]
Length = 1203
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 110 TSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
+SD +SG A+E + Q K S+ +R + +++ V E
Sbjct: 569 SSDPACSQSGPMEAEEDSLPEQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRL--RE 626
Query: 170 ITDRVKARDPKQ-VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+ D V + + + +AA +E +++ + K K+RS++FN+ D +N DL +V+ G+
Sbjct: 627 LPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGD 686
Query: 229 VTPERLATMTPEELASDE--RRQENEE 253
VTP L M+ +LA E R ++ EE
Sbjct: 687 VTPYDLVRMSSMQLAPQELARWRDQEE 713
>gi|47271475|ref|NP_653170.3| SPOC domain-containing protein 1 [Homo sapiens]
gi|74749560|sp|Q6ZMY3.1|SPOC1_HUMAN RecName: Full=SPOC domain-containing protein 1
gi|47077409|dbj|BAD18592.1| unnamed protein product [Homo sapiens]
Length = 1216
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 110 TSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
+SD +SG A+E + Q K S+ +R + +++ V E
Sbjct: 569 SSDPACSQSGPMEAEEDSLPEQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRL--RE 626
Query: 170 ITDRVKARDPKQ-VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+ D V + + + +AA +E +++ + K K+RS++FN+ D +N DL +V+ G+
Sbjct: 627 LPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGD 686
Query: 229 VTPERLATMTPEELASDE--RRQENEE 253
VTP L M+ +LA E R ++ EE
Sbjct: 687 VTPYDLVRMSSMQLAPQELARWRDQEE 713
>gi|33988379|gb|AAH07910.2| SPOCD1 protein, partial [Homo sapiens]
Length = 342
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 182 VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEE 241
+AA +E +++ + K K+RS++FN+ D +N DL +V+ G+VTP L M+ +
Sbjct: 38 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 97
Query: 242 LASDE--RRQENEE 253
LA E R ++ EE
Sbjct: 98 LAPQELARWRDQEE 111
>gi|89365915|gb|AAI14431.1| SPOCD1 protein [Homo sapiens]
Length = 1203
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 110 TSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
+SD +SG A+E + Q K S+ +R + +++ V E
Sbjct: 569 SSDPACSQSGPMEAEEDSLPEQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRL--RE 626
Query: 170 ITDRVKARDPKQ-VAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+ D V + + + +AA +E +++ + K K+RS++FN+ D +N DL +V+ G+
Sbjct: 627 LPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGD 686
Query: 229 VTPERLATMTPEELASDE--RRQENEE 253
VTP L M+ +LA E R ++ EE
Sbjct: 687 VTPYDLVRMSSMQLAPQELARWRDQEE 713
>gi|344302440|gb|EGW32714.1| hypothetical protein SPAPADRAFT_60072 [Spathaspora passalidarum
NRRL Y-27907]
Length = 101
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 271 TTDQFKCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
T Q CG + Q+Q RSADEPMTT+ C +C RWK
Sbjct: 57 TAAQCPIDSCGGMKAYFFQLQIRSADEPMTTFYKCVKCGHRWK 99
>gi|71051072|gb|AAH99524.1| Phf3 protein, partial [Mus musculus]
Length = 366
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
Query: 210 FNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE----RRQEN 251
FN+ D KN L ++VL GEVTP+ L M+PEELAS E RR+EN
Sbjct: 1 FNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRREN 46
>gi|429965129|gb|ELA47126.1| hypothetical protein VCUG_01399 [Vavraia culicis 'floridensis']
Length = 105
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C CG + ++++MQTRSADEPMT + C +C WK
Sbjct: 68 CEKCGYNTATFYEMQTRSADEPMTIFYQCLQCKNTWK 104
>gi|209881247|ref|XP_002142062.1| DNA-directed RNA polymerase III subunit RPC10 [Cryptosporidium
muris RN66]
gi|209557668|gb|EEA07713.1| DNA-directed RNA polymerase III subunit RPC10, putative
[Cryptosporidium muris RN66]
Length = 106
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 265 PEKKKGTTDQFK-------CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
PE+ +G ++ C C + + Q+Q RSADEPMT++ TC +C +WK
Sbjct: 49 PEEAQGDMNEIASAKVMAVCPKCSNTEAYFFQLQIRSADEPMTSFYTCVKCEHKWK 104
>gi|387593244|gb|EIJ88268.1| hypothetical protein NEQG_01712 [Nematocida parisii ERTm3]
gi|387596044|gb|EIJ93666.1| hypothetical protein NEPG_01238 [Nematocida parisii ERTm1]
Length = 102
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C + +Y+QMQTRSADEPMT + TC C W+
Sbjct: 65 CPECSFTKANYYQMQTRSADEPMTIFNTCTRCKHTWR 101
>gi|225734445|gb|ACO25213.1| transcription elongation factor-SII [Epizootic haematopoietic
necrosis virus]
Length = 92
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 23/37 (62%)
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRW 312
KC GCG Q QTRSADE MT + C+EC KRW
Sbjct: 54 KCPGCGSRRVHALQRQTRSADETMTLFAMCSECGKRW 90
>gi|402853722|ref|XP_003891539.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Papio anubis]
Length = 1199
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 110 TSDSNAVKSGCSTAKEKKATASIRKPSHADQAKDSMRDKIRKDLEKALSRVASEAADDEE 169
TSD +SG A+E+ + Q K S+ +R + +++ V E
Sbjct: 565 TSDPACPQSGPMEAEEEPLLERAEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRL--RE 622
Query: 170 ITDRVKARDP-KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGE 228
+ D V + + K +AA +E +++ + K K+RS++FN+ D +N DL +V+ G+
Sbjct: 623 LPDSVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGD 682
Query: 229 VTPERLATMTPEELASDE--RRQENEE 253
VT L M+ +LA E R ++ EE
Sbjct: 683 VTHYDLVRMSSMQLAPQELARWRDQEE 709
>gi|91083709|ref|XP_969911.1| PREDICTED: similar to AGAP004866-PA [Tribolium castaneum]
gi|270007882|gb|EFA04330.1| hypothetical protein TcasGA2_TC014624 [Tribolium castaneum]
Length = 1612
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 24/134 (17%)
Query: 124 KEKKATASIRKPSHAD--QAK-DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDP- 179
+EK T ++K +A QAK +++RD ++K + E++T+R+K D
Sbjct: 797 REKPTTPKVQKVRNASTPQAKQENIRDNVKKTVY-------------EQLTNRLKMVDDL 843
Query: 180 -------KQVAASVERVMFEKLRPMGVAEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPE 232
K ++ +E +++ G + K+RS++FN+ D KN L RR+ + P
Sbjct: 844 KLSEEELKNISLEIESQLYKCFGDTGQKYRNKYRSLIFNIKDIKNQTLWRRICEKTINPY 903
Query: 233 RLATMTPEELASDE 246
+L ++P++LAS E
Sbjct: 904 QLVRLSPDDLASQE 917
>gi|378755807|gb|EHY65833.1| hypothetical protein NERG_01440 [Nematocida sp. 1 ERTm2]
Length = 102
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 277 CSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
C C +Y+QMQTRSADEPMT + TC +C W+
Sbjct: 65 CPECSCETANYYQMQTRSADEPMTIFNTCTQCKHTWR 101
>gi|444323471|ref|XP_004182376.1| hypothetical protein TBLA_0I01990 [Tetrapisispora blattae CBS 6284]
gi|387515423|emb|CCH62857.1| hypothetical protein TBLA_0I01990 [Tetrapisispora blattae CBS 6284]
Length = 111
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CG + + Q+Q RSADEPMTT+ C C RWK
Sbjct: 76 CGGESAYFFQLQIRSADEPMTTFYKCVNCGNRWK 109
>gi|403217034|emb|CCK71529.1| hypothetical protein KNAG_0H01160 [Kazachstania naganishii CBS
8797]
Length = 110
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CG + + Q+Q RSADEPMTT+ C C RWK
Sbjct: 75 CGGESAYFFQLQIRSADEPMTTFYKCVNCGNRWK 108
>gi|226288892|gb|EEH44404.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 137
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 279 GCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
GC ++Q+Q RSADEPMTT++ C C RW+
Sbjct: 101 GCDGDRAFFYQLQIRSADEPMTTFLKCTTCGARWR 135
>gi|340375596|ref|XP_003386320.1| PREDICTED: PHD finger protein 3-like [Amphimedon queenslandica]
Length = 738
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%)
Query: 143 DSMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRPMGVAEK 202
+S+R +K L++ L + ++E +D V + K + + + + R +
Sbjct: 393 ESVRSHAQKALKQVLHTRSQLVPEEERPSDEVILKLSKDIELKLYNLHNQVPRETNQKYR 452
Query: 203 RKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDE 246
K RS++FN+ D KN L +++L GE++ ++L M+PE+LAS E
Sbjct: 453 VKCRSLLFNLKDTKNEGLFKKILCGELSTKQLVRMSPEQLASRE 496
>gi|365761585|gb|EHN03230.1| Rpc11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 110
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CG + + Q+Q RSADEPMTT+ C C RWK
Sbjct: 75 CGGESAYFFQLQIRSADEPMTTFYKCVNCGNRWK 108
>gi|50289467|ref|XP_447165.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526474|emb|CAG60098.1| unnamed protein product [Candida glabrata]
Length = 100
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 280 CGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
CG + + Q+Q RSADEPMTT+ C C RWK
Sbjct: 65 CGGESAYFFQLQIRSADEPMTTFYKCVNCAHRWK 98
>gi|79567610|ref|NP_180841.2| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|330253652|gb|AEC08746.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 249
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
++ LF AKK+AD A A ++ E C D L L F + + + ++ + L L
Sbjct: 163 MLELFEMAKKSADVANAKGFLAAKEEASICVDILALLMKFSIISTAIETRRIMEKLERLT 222
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH K+ NAA LLH W+Q I
Sbjct: 223 KHKDRKICNAALALLHHWRQTI 244
>gi|224002418|ref|XP_002290881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974303|gb|EED92633.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2469
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 144 SMRDKIRKDLEKALSRVASEAADDEEITDRVKARDPKQVAASVERVMFEKLRP----MGV 199
S RDK R L+K L D T V +A+ +E+ +F+K R +
Sbjct: 2029 SARDKSRLFLQKVLMAGMKTFGMDHNSTSEVHDF-CAMLASDLEQAIFDKFRSPHDSISN 2087
Query: 200 AEKRKHRSIMFNMSDEKNPDLRRRVLIGEVTPERLATMTPEELASDERRQENEEIK 255
+ K RS+ FN+ D KNP L RVL G++ +L M+ +LAS E +Q ++++
Sbjct: 2088 EYRDKVRSLRFNLQDPKNPMLCARVLSGQLPISQLIVMSSADLASKELKQIRQQVQ 2143
>gi|62184635|gb|AAR99369.2| hypothetical protein At2g32820 [Arabidopsis thaliana]
Length = 249
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 5 LVTLFGAAKKAADAAAATN--RSEPEVQRCADALKHLQAFPVTYDLLVSTQVGKSLRHLK 62
++ LF AKK+AD A A ++ E C D L L F + + + ++ + L L
Sbjct: 163 MLELFEMAKKSADVANAKGFLAAKEEASICVDILALLMKFSIISTAIETRRIMEKLERLT 222
Query: 63 KHPCEKVQNAASELLHIWKQKI 84
KH K+ NAA LLH W+Q I
Sbjct: 223 KHKDRKICNAALALLHHWRQTI 244
>gi|449684343|ref|XP_004210603.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Hydra magnipapillata]
Length = 74
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 276 KCSGCGKSNCSYHQMQTRSADEPMTTYVTCAECNKRWK 313
KC C + Q+QTRSADEPMTT+ C C RWK
Sbjct: 36 KCPKCEFKKAYFMQIQTRSADEPMTTFYKCCSCGHRWK 73
>gi|42567655|ref|NP_196133.3| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|75170631|sp|Q9FHK9.1|MD26B_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26b
gi|9759255|dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana]
gi|332003450|gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 436
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 34 DALKHLQAFPVTYDLLVSTQVGKSLRHLKKHPCEKVQNAASELLHIWKQKI--------- 84
D+L+HL+ + D+L ST++GK++ L+KH +K++ A L+ WK+ +
Sbjct: 161 DSLRHLKLMSLNVDILKSTEIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKE 220
Query: 85 VLGKETNGNKRNGSKLSVDEKF 106
+ G E N S L +E F
Sbjct: 221 ITGAEGTPESANPSVLDEEEAF 242
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.125 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,396,579,582
Number of Sequences: 23463169
Number of extensions: 167862048
Number of successful extensions: 554084
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1814
Number of HSP's successfully gapped in prelim test: 1349
Number of HSP's that attempted gapping in prelim test: 549301
Number of HSP's gapped (non-prelim): 5312
length of query: 314
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 172
effective length of database: 9,027,425,369
effective search space: 1552717163468
effective search space used: 1552717163468
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)